CSPI07G01820.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G01820.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pentatricopeptide repeat (PPR) superfamily protein
Location	Chr7 : 1589923 .. 1594385 (-)
Sequence length	603

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTCACATCATCTTTTATTTCTATCACTTCCACTATTCTCTTGTGCAAAGCGGCAGCCACCAGTTTTCTCAAAATAACACCGGCGACCGTAACGAACTCCGGCCAGCGACCACTAACGGCGCCTTTGAAGCCCCACTAACAGCGACGCAAACTCCTTCCTGCAGCGGCGGTGCTCTATCCACGAACCACGACACTCAAATCTAACTACAGCGGCGCGATTCCTCTACTTTCTTCTCTGTATCGGTGGTGTTGTGACAGTCTAGATTTCAATCTATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTCCTCCATCATTGGGAGACTGCAGGTCAGTCTCGGTTTTGATTTTTTGTTGAACTTATTTGTATTTTTTATTAGCTTGAAGATTATAATCTTTTATAACCTTTGAAATTTTGTTTCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAGACAATGTATGTTTGTTTTTCTTGCCTTCACATGTGATTTGTAGGATATGGTAGAAGAAAAAATCTTAAACAAAAATTAAAGGGGATCATGAACTTGAGCACCAACTGTCAACTAAATAAGTCATGCCTCTTTATCAGTAAGAGATTCAAAGTTTGAATTTCCACTCGAACATGTTTGAATAAAAGAATTGGAGAGCATGAAGTTGGTTGTGCATACACTTTAGTTTGGCTGGTGTGTTTATGTGAGACACATGTCAAACACTTGGAACTCCAACACTTGTTGGATTCATATAGAGCACTTTTTTGTTTGTTATATTTTTAGATACTAGTTGTACAAAGTCAATCTAGGTTCAAAATTGTTTAGTTATACTAAATAGACACATCTATAATAAAAAAATAATAAAATTTCAAAGCAAAATGCATCTAACATATTGACTCTTAATGTCTTTCTCGTGTAAAAATGATATATTTACTCAAACGTGTAAATTACAATGACACTTAGCCCTTGTGCCCATGTCCTAGATTTTAAAAAAATGGTGTGATCGTGTCTGTTGTGTCGTATCTATGTCTGTGCTTCTTAAATCCAAAAGGTCTGTTAAAATATTCATGCTACCTTGTTTTCATGAATGAAGAATCTAAATAAAGATCTCAGGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAATCAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTAAGAACTGTCCTCATCCCTTTCTATGTCATGAAAGAAAAACTGTGTATCCAGTGAAAACTAAAAACTGATCATGTTAGAATTGAATTGGAGTAGGCTTCTTAGTCTGAAGTCTCATTTTTGTGGGGTTAGTTTTTTGCACCCTTGTATATTTTTCATTTGAAAATTCTTTTCCCGATCATTCTAGAGGAAACCAACTAACCTATGAAAGTCAGTTTTATGTCGCCAACAGTTGGCTTCTTTATCCATTGTTTCATTTTTGAGCAAATATGCGATATCTGTTTGAATTCTCATGTATGTATTCAGCTTGATGTTTTAGCTTATGTTACGATACACCTATATTTATGTTTCATTCCCCTCAATGTCTTTAGGTACAATCTTAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGTAATTTTTCTCCCAGTTGATGAATTTGATGGGATGTTCTAGTTGCAACTAGAGGATTAATGAAGTTGGTAATGTAAAGAAAAAAAGAACATGTTATATATATATAAATTTTTACACCAAAATAGAGCATTGAAAATGGATGAATCATGCACTTCATTTGTAGATTTTATTTGAAAATTCTAGGCTTCTAGCATTTGTCTCTTTCCAAACCTTCGTTATCAACGCAGAAATGATACTGAACCAAACAACTTCTTTAGTGGCTTCGAATGGGTGGTCCATTAGTGACGAAAATGAAAACAAAAACATAGAGATTGAATTTTCTTCTGATAGGTGCTTGTGAAACATCCTTTTCTAGTACTGGCCATCAACTATCATCTTCTTTTCCCCCTCCAAGTTATGTAAATCACTATGGCCCATTTTTTCTCTCAGAAAATTTGTGTATCTTGAATTGTTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGGTTAGCATTTGATACTTTCAGCACATCATATATTGAACTTTATTGATGAATATGTCACTTTTAAATTGAAAATAATCAAATTAGCGAATAAAAAGATGGGGCTTTTTCAAAAATAGAAAGAAGAAAAAAAACAAACTATTGACACTCCATAAAAAAATCACCAAAAAGACAAAATTCATTACACTTTATTTTTCTATGAAGTGTATTGTCAATTTTTCAATTTTTCACAATTTCCCTAAAAAGAACCTTGGAATGTGAAGATTTGCAAGTTGGATGGGTTTAGGTAAATGGTGTTATATGTCCTAGAAAATGTTGAATGTTCAACCTTGAATGTTAGGAAGCGTCTGGCCCACAAAGTGGAGTAAACAAGTATGAGATTAATATTTTGAAGTTAGTAAGTTTTTGTAGGTAGAGTTGTAAGATTGAGTTCTTTCAATATTGTGAAAAGTAGATTATGAAAGCAAGATGGAGTTACTTGCTAAATGTAGAAAGTAGAGATGGAGGGAAAGATTAAATTACTTGGTAAATGCAAAAAGTACAAAAAATAAAATAAAAAATAAAGAAGATGAAGTTACTCGATAAATGTGCTAGTTCAATAATGTTTTTTATAGAAATTGAGTTGTTTAAGTTGGTGAGCCAAACGACCCCTTGGTGATTCCATTCTTCTAGATGCAATGTTTACTTCTATTTTCACGCTTTCATCATGTTCCTCTCTGGGTCTTTTGTCTAAGACCATATGTTGTATATTTTCTTATCTAATGGCTTTCATTGTCATGAACCTTGCTCTTCTGACTTTGAAGTGTTCATTTACCACTAGAGGAAAATCTTCATGTTTTTCTCGTTTTCTACCGTTTTACAACTATGGTTGAGTGGTTTATACACTACTGCTTCTCAATGTACTTTCTTCTTTATTTCATAAAACATGAAGATTATTATCTCATTAGAGATATTCTTTTTGCCAAAGCTATTTGTAATCCCTCATGTAGGTAGCTTCGAAAGAGGGAAGAGTACAGGAAATCTCTAAATTTGAAATCACTGCACATATATACATATCCTTGGCTATTATAAAAGAACAACTACAAGTCTTGTCTTTCCATTTTCTATGAAAGGCTTGACCAGATTTGACGTTCCTCGTTAATTTTTACTGTCTGAAGATTTGTTTTGTACACCTTAGTTTCCCACAATAAGTATACTCAGCGTTGTCTAATAAAATATTATGTTCCTTTCAAAAAATGAAGAAAAAATAATAAATACAATATTCTGTTCATCTGTTCATTACACAAAATTCATTACACTAGTGGTCATCTGTTCTTGTCAGAGGGGTGGTTGAACTTCGTTGGATTTCCACCCATTGTTTCTTTTTTCCTTCTATTATGGTCATGTTTGGTAAAAAATACTTTTATCACATTTAAAACCACTCCCAATTGTTTAATCTTTTAAATATTTAATGGTTTAGTTTTATATTCTTAAACACAATTTACTTACATGATTCAAAGTCGTATGGGAATGACTTTTAATACTGTAGTATACTATTATTGATATATTGTGGTGTTTTCATATTGAAAAATTAATCTGATTCTTGATCCTCTTTTGCAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAGCTAATGTATGATACGATCAAACAACTCAACAACTTATGATTTCATCCGCATGACTAGCAACAAAATCTCATATACTTTCAATATCAACTATTGGAAGAGTTGAGGTAACCACAAAACCAACTAGAAGATGAAACTTCAAGGATATCTCACCTGGTGGTTATTGTTAATAATGATCATTGCTTAGCAGATAAAAGCGCAATCAACCGTTCAAATGTAGATTCGATCTTCCATTGATGAACACGAAAAGGTAAAGAATTTACCTTGTGAGTTTGATACATTATAGCAATCTTAGTTTAAAATAGTATAGTATTTATCACTATTCTCCCCCTCCACAACAATATCAATTTAATATTCTTAGCGATTGTTGTTTTCTTTTGTGCCTTTTGGTATTTGGAGAGAGCGTGGTGTAAATGTGAAGCCTCTG

mRNA sequence

ATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTCCTCCATCATTGGGAGACTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAGACAATGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAATCAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAG

Coding sequence (CDS)

ATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGAACTTCAAGTTCGTTTGATTTCGCAGTTCCAAAATGCCTCCTCCATCATTGGGAGACTGCAGTTGCTTCAGGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGCATTGTAGAGGCGTTATTGGCGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCTTCCATTAAAAAGACAATGGAAGAACTTGGGAATATTGTCAATTCAATGGAGAAGATTTATCGTGACGGGAAGCAATTAGTCAAAGGCGGTTCTAATCAGCCATCAATAAAACAACTACAACAAAAAGTTGGTTTAAAACCCAGTCTTGAAGATTGTTTGAATGGTTTAATGCTTCTCTGCCACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATCGTCTCAGCGCTTCCAGAACTTTTCTGGAAAGCTAGGAATCATGGAGCTCAAGACCTCAGCTCCTTACATCAACTCTTGGTTGACCAACCTAACATTAAGAAAGAGGAAGTTGAATTCGTCTTTGATACTATACTGGTTCTAGAAGCCTAG

Homology

[Close]

BLAST of CSPI07G01820.1 vs. Swiss-Prot
Match: Y5382_ARATH (Uncharacterized protein At5g43822 OS=Arabidopsis thaliana GN=At5g43822 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.2e-40
Identity = 90/199 (45.23%), Postives = 138/199 (69.35%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A++ +QM  L+    S+K  MEE    V + EK++RDG QL +  S++   ++++++
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KP + DCL GL +L  MH+SEY+LK SI+S L  L  K       DL++L  L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKP---SPGDLNALQYLVVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI K+EV+ +FD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

[Close]

BLAST of CSPI07G01820.1 vs. TrEMBL
Match: A0A0A0K4X9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025190 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.5e-105
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEVEFVFDTILVLEA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

[Close]

BLAST of CSPI07G01820.1 vs. TrEMBL
Match: A0A059BPU4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01788 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-59
Identity = 122/199 (61.31%), Postives = 156/199 (78.39%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEA V+K+QQ+F+K ++EMDRW ELQ+RL+SQF+NASSI+ RLQ+++D KN+G L  +DG
Sbjct: 1   MEAAVRKFQQKFKKVREEMDRWGELQLRLVSQFRNASSIMDRLQVIRDGKNYGPLKAVDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I EA+  KQ+ESL+    S++KTMEE   +V S+EKI+RDGKQLVKGGS QPS+K LQQ+
Sbjct: 61  IGEAVWTKQVESLENIMLSMRKTMEEFHGVVMSLEKIHRDGKQLVKGGSGQPSVKYLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VG+KP L+DCL+GLM+L  MHRSEY LK S+VSAL  L   A    A DL +L QLLVDQ
Sbjct: 121 VGVKPCLQDCLDGLMILYEMHRSEYFLKSSVVSALSTL---ALKPSASDLHALQQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI KEEV+F++D I   E
Sbjct: 181 PNIPKEEVQFIYDIIFAEE 196

[Close]

BLAST of CSPI07G01820.1 vs. TrEMBL
Match: D7UDC1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g01050 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.1e-58
Identity = 124/199 (62.31%), Postives = 154/199 (77.39%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           ME MVKKYQQ+FRK +DE  RWDELQ RL+SQF+NASSII RLQ +Q+ KN+G+L  +DG
Sbjct: 1   MEGMVKKYQQKFRKVRDETKRWDELQSRLLSQFRNASSIIERLQSIQNSKNYGTLKCIDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A+L KQMESL+    S+KKT++E   IV S+EKI RDG+QLVKGGS + ++KQLQQ+
Sbjct: 61  IGDAVLRKQMESLETILLSLKKTLKEFHGIVLSLEKIVRDGRQLVKGGSVKLTMKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KPSL DCL+GL LL  MH+SEY LK S+VSAL  L  K     A DL +LHQLLVDQ
Sbjct: 121 IGVKPSLADCLDGLSLLHEMHQSEYLLKSSVVSALSTLTLKP---SASDLGALHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI KEEV+F+FD +   E
Sbjct: 181 PNIPKEEVQFIFDIVFAEE 196

[Close]

BLAST of CSPI07G01820.1 vs. TrEMBL
Match: A0A0K9QTK1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142870 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.5e-57
Identity = 117/195 (60.00%), Postives = 154/195 (78.97%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           ME ++KKYQQ+FRK ++EMDRW++LQ RL+SQF NASSIIGRLQ++ D KN+GSL G++G
Sbjct: 1   MEGILKKYQQKFRKVREEMDRWEDLQSRLMSQFSNASSIIGRLQMIGDKKNYGSLKGVNG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           + +A+L KQMESL+    SIKKT+E+  +IV S+EK+ RD KQLV+GGS+Q S KQLQQ+
Sbjct: 61  VEDAVLQKQMESLETILLSIKKTVEDFHSIVLSLEKMVRDSKQLVQGGSHQRSTKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSL DCL+GL +L  MH SEY LK S+VSAL  +   A    ++DL +L QLL DQ
Sbjct: 121 VGLKPSLSDCLDGLAILLEMHNSEYLLKSSVVSALLNI---ALKPSSKDLGALRQLLFDQ 180

Query: 181 PNIKKEEVEFVFDTI 196
           PNI ++EV+F++D I
Sbjct: 181 PNIPRDEVQFIYDII 192

[Close]

BLAST of CSPI07G01820.1 vs. TrEMBL
Match: A0A0J8CWF0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050520 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.5e-57
Identity = 117/195 (60.00%), Postives = 154/195 (78.97%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           ME ++KKYQQ+F+K ++EMD W+ LQ RLISQF NASSII RLQ++ D KN+G+L G+DG
Sbjct: 1   MEGILKKYQQKFKKVREEMDNWENLQSRLISQFSNASSIIQRLQVIGDKKNYGNLKGVDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A+L KQMESL+ +  S+K TMEE   IV S+EK+ RD KQL+ GGS QPS KQLQQ+
Sbjct: 61  IEDAVLQKQMESLENNLLSMKNTMEEFHKIVLSLEKMVRDSKQLLGGGSRQPSTKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KPSL DCL+GL++L  MH+SEY LK S+VSAL ++ +KA    + DL +L QLLVDQ
Sbjct: 121 MGIKPSLSDCLDGLVILQEMHKSEYLLKTSVVSALLKIAFKA---SSNDLGALRQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTI 196
           PNI ++EV+F+FD I
Sbjct: 181 PNIPRDEVQFIFDII 192

[Close]

BLAST of CSPI07G01820.1 vs. TAIR10
Match: AT5G43822.1 (AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 165.2 bits (417), Expect = 4.1e-41
Identity = 90/199 (45.23%), Postives = 138/199 (69.35%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  ++G+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           I +A++ +QM  L+    S+K  MEE    V + EK++RDG QL +  S++   ++++++
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           +G+KP + DCL GL +L  MH+SEY+LK SI+S L  L  K       DL++L  L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKP---SPGDLNALQYLVVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLE 200
           PNI K+EV+ +FD I   E
Sbjct: 181 PNIPKDEVQHIFDVIFAEE 193

[Close]

BLAST of CSPI07G01820.1 vs. NCBI nr
Match: gi|449454299|ref|XP_004144893.1| (PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 2.2e-105
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEVEFVFDTILVLEA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 200

[Close]

BLAST of CSPI07G01820.1 vs. NCBI nr
Match: gi|659094000|ref|XP_008447827.1| (PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo])

HSP 1 Score: 380.2 bits (975), Expect = 2.3e-102
Identity = 193/200 (96.50%), Postives = 199/200 (99.50%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEV+FVFDTILVLEA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 200

[Close]

BLAST of CSPI07G01820.1 vs. NCBI nr
Match: gi|778723284|ref|XP_011658635.1| (PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis sativus])

HSP 1 Score: 379.8 bits (974), Expect = 3.0e-102
Identity = 197/200 (98.50%), Postives = 197/200 (98.50%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQ   DPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQ---DPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEVEFVFDTILVLEA
Sbjct: 181 PNIKKEEVEFVFDTILVLEA 197

[Close]

BLAST of CSPI07G01820.1 vs. NCBI nr
Match: gi|659094002|ref|XP_008447828.1| (PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo])

HSP 1 Score: 369.8 bits (948), Expect = 3.1e-99
Identity = 190/200 (95.00%), Postives = 196/200 (98.00%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQ   DPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQ---DPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIKKEEVEFVFDTILVLEA 201
           PNIKKEEV+FVFDTILVLEA
Sbjct: 181 PNIKKEEVQFVFDTILVLEA 197

[Close]

BLAST of CSPI07G01820.1 vs. NCBI nr
Match: gi|659094004|ref|XP_008447830.1| (PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 1.4e-80
Identity = 156/162 (96.30%), Postives = 161/162 (99.38%), Query Frame = 1


Query: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60
           MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120
           IVEALL KQMESLQLSFSSIKKTMEELGN+VNSMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKA 163
           VGLKPSLEDCLNGLM+LC+MHRSEY+LKESIVSALPELFWKA
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKA 162

The following BLAST results are available for this feature:

BLAST of CSPI07G01820.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5382_ARATH	7.2e-40	45.23	Uncharacterized protein At5g43822 OS=Arabidopsis thaliana GN=At5g43822 PE=2 SV=1	[more]

BLAST of CSPI07G01820.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4X9_CUCSA	1.5e-105	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025190 PE=4 SV=1	[more]
A0A059BPU4_EUCGR	2.2e-59	61.31	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01788 PE=4 SV=1	[more]
D7UDC1_VITVI	3.1e-58	62.31	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g01050 PE=4 SV=...	[more]
A0A0K9QTK1_SPIOL	4.5e-57	60.00	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142870 PE=4 SV=1	[more]
A0A0J8CWF0_BETVU	4.5e-57	60.00	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050520 PE=4 S...	[more]

BLAST of CSPI07G01820.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G43822.1	4.1e-41	45.23	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of CSPI07G01820.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449454299\|ref\|XP_004144893.1\|	2.2e-105	100.00	PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis sativus]	[more]
gi\|659094000\|ref\|XP_008447827.1\|	2.3e-102	96.50	PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo]	[more]
gi\|778723284\|ref\|XP_011658635.1\|	3.0e-102	98.50	PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis sativus]	[more]
gi\|659094002\|ref\|XP_008447828.1\|	3.1e-99	95.00	PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo]	[more]
gi\|659094004\|ref\|XP_008447830.1\|	1.4e-80	96.30	PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI07G01820	CSPI07G01820	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI07G01820.1	CSPI07G01820.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G01820.1.utr3p1	CSPI07G01820.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G01820.1.cds6	CSPI07G01820.1.cds6	CDS
CSPI07G01820.1.cds5	CSPI07G01820.1.cds5	CDS
CSPI07G01820.1.cds4	CSPI07G01820.1.cds4	CDS
CSPI07G01820.1.cds3	CSPI07G01820.1.cds3	CDS
CSPI07G01820.1.cds2	CSPI07G01820.1.cds2	CDS
CSPI07G01820.1.cds1	CSPI07G01820.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI07G01820.1.utr5p1	CSPI07G01820.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 5..25 scor
None	No IPR available	PANTHER	PTHR37904	FAMILY NOT NAMED	coord: 2..199 score: 6.8
None	No IPR available	PANTHER	PTHR37904:SF1	SUBFAMILY NOT NAMED	coord: 2..199 score: 6.8