Csa6G157090 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G157090
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionReticulon-like protein B18; contains IPR003388 (Reticulon)
LocationChr6 : 11025036 .. 11027269 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAATCAAATTCAAAACCACGACTTGAACTTAAACATTTTCAGAAATCCGATTCTGTACTCTAAGATCTTCCATTAAACCAATCTCCTCCATGGATTTCACTCCTCCTTCTCACCGATCCGACCCTCGATCTCGCACAAAATCATCCTCACGCCTCGCCGTTGAAGCCGACCAAACACCCCATTTCTCAGTCGACGCCATTTCTTCGCCGCGAAGGAAAACCCCTTCCCCTTCCATCCAGGACATCTTGTTTCTTTCTCCTTCCACTGTCGGAAAATCCAGGTCCCGTCTCGTGGATCGCTTCGAAATGAACGACGAAGTTCCGGAGCCCGCCGTCTCACGGAGAAGGTGTAGAAACCGTGGCCCCCAATTGGGTCTTATGGGTTGTGCTTCTCCGAGGAGTATTAGAAGGTCAAGAAGACGATCTGAGGTGGAGACTAGAGAAGAGAGAGATTTGTGTTTAGCGGAAGAGTTTGTGAAGGCTAGAAAGAGGAAACAGAGCGGGAGGTCGAAGAAGGAGAAGCTCAGTTTGGTTCCAGTTCCATCGACGCCTTCGAGTTCAACGACTCCAAGTATATCTAAGATTTCTCTATTTGGTGTTCTTGATTGATTTGGTTTCTATCTGTTCTGATTTGATTTGTATGTGTTTATTAGAACTTGATAATGATGAGAATGGTAGTTTGGATCAAATTGGGCAGCTGATAACTGATCTGATAATGTGGAAAGATGTGGCTAAGTCAAGCCTTTGGTTTGGACTTGGCTCTTTGTTTTTCTTCTCCACTTGCTTCACTCGAGGAGTTAGCTTTAGGTCTGCGTCTTAAACTCGAATAAATCGTTAACCATTGTACATTTCTGCGAATGTTTGATCATCTATTAACAGCTCTAATATTGATAATTACAGCATTTTCTCAGCAATTTCCCAGCTTGGACTTCTGTTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCAAAGGTACAGTTTCTAATGAATCTTTAATCACCTCAAAATCTGTTAAGAGAGTTCCTAATGTTTATAAGATAGATGGTCATTCCTCCCATTATTAATTGGGTTTGATAAAATCCAATTGATTCTTGTTATAAGGTAAAATTTGAAATTGTAGGAACAATGATGAAAAGAAACATAAAGACTTCAAGCTTAAAGAAGATGACATAAAACGCTTGGTGAAACTGGTTCTTCCGGCTGCAAATTTCGCCATTTTCAAGATTCGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCTTGAAAGTAACCATAAAACTCAACATCTATGATCATTGAACAATTTCAATTAACTAATCATATAAACTTCAGTGGTTGGATGTTTAATGGATTTAAGTATTTCTGGGGTTTTTCAGGTAGCTCCATTTCTCATTTTAGGAGCTGAATATGGATATCTTATTACTCTTAGAAGACTCTGTGCAATTGGTATAATACAACAGAAAAATCATTTCAGAACTTGCTTAAAAATCTCTTGTTGATTTATGATCGCTACTTTAATCTTCATTCACTTTCAGGGTTCTTTAGCAGTTTCTCTGTGCCAAAGCTGTATACATGTTACCAGATTCAGATAAACAGCAAAGGTAAATAGGAATTCTAGGAAACACCCACTTAAATATAGCTACTTCTGCATTTTGTATGTAAAATGTGATGCTGAAAAAGAAGAATGATGATGGTGGTGGTATTTTACAGTGGATGCCGTAAAACAATGGATGTTTGAAGCATGGGAAGCTTGCTCACATAAGAAGGTTGTGATAGGATCAGCAGCCACAGCGTTTTGGAACTTTTCTTCCCTGAAGACCCGAATTTTCACAGGTAACAATCATGTTAGATGATCTTAGTTTCTTCAATCTCCATTGTTCTAGCTTAATAAAGGATGATTATTAAGCTCTGTCAGGTTTTGTTTGTTACAGCTTTCATTGTTCTAGTCATAGTTCGATACTGCCGGCAATTTATAGTGTCGTCAGAACCGGAAATTGAAGAAGTACAAGAGGATGAGAAGCAGGCATTGGTTGTGGTAGAAGCAGGCAAGGAGGAGGAGCAGAAGCAAGTTCAAGTGGTGGCGGAACCCCATTGTTAGCTGTGATTTGGCTTTAGAGTTTTTTTTACTGCCAACACTGAAGTGTATAATAAACAAATGGGCTGTTTAGAGCTTTTTTACCTCTTAAATTTAATTGATTGATTTAAAGCTCAAACATCTTTTGGCCAGAAAA

mRNA sequence

ATGGATTTCACTCCTCCTTCTCACCGATCCGACCCTCGATCTCGCACAAAATCATCCTCACGCCTCGCCGTTGAAGCCGACCAAACACCCCATTTCTCAGTCGACGCCATTTCTTCGCCGCGAAGGAAAACCCCTTCCCCTTCCATCCAGGACATCTTGTTTCTTTCTCCTTCCACTGTCGGAAAATCCAGGTCCCGTCTCGTGGATCGCTTCGAAATGAACGACGAAGTTCCGGAGCCCGCCGTCTCACGGAGAAGGTGTAGAAACCGTGGCCCCCAATTGGGTCTTATGGGTTGTGCTTCTCCGAGGAGTATTAGAAGGTCAAGAAGACGATCTGAGGTGGAGACTAGAGAAGAGAGAGATTTGTGTTTAGCGGAAGAGTTTGTGAAGGCTAGAAAGAGGAAACAGAGCGGGAGGTCGAAGAAGGAGAAGCTCAGTTTGGTTCCAGTTCCATCGACGCCTTCGAGTTCAACGACTCCAAAACTTGATAATGATGAGAATGGTAGTTTGGATCAAATTGGGCAGCTGATAACTGATCTGATAATGTGGAAAGATGTGGCTAAGTCAAGCCTTTGGTTTGGACTTGGCTCTTTGTTTTTCTTCTCCACTTGCTTCACTCGAGGAGTTAGCTTTAGCTCTAATATTGATAATTACAGCATTTTCTCAGCAATTTCCCAGCTTGGACTTCTGTTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCAAAGGTACAACTTCAAGCTTAAAGAAGATGACATAAAACGCTTGGTGAAACTGGTTCTTCCGGCTGCAAATTTCGCCATTTTCAAGATTCGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCTTGAAAGTAGCTCCATTTCTCATTTTAGGAGCTGAATATGGATATCTTATTACTCTTAGAAGACTCTGTGCAATTGGGTTCTTTAGCAGTTTCTCTGTGCCAAAGCTGTATACATGTTACCAGATTCAGATAAACAGCAAAGTGGATGCCGTAAAACAATGGATGTTTGAAGCATGGGAAGCTTGCTCACATAAGAAGGTTGTGATAGGATCAGCAGCCACAGCGTTTTGGAACTTTTCTTCCCTGAAGACCCGAATTTTCACAGCTTTCATTGTTCTAGTCATAGTTCGATACTGCCGGCAATTTATAGTGTCGTCAGAACCGGAAATTGAAGAAGTACAAGAGGATGAGAAGCAGGCATTGGTTGTGGTAGAAGCAGGCAAGGAGGAGGAGCAGAAGCAAGTTCAAGTGGTGGCGGAACCCCATTGTTAG

Coding sequence (CDS)

ATGGATTTCACTCCTCCTTCTCACCGATCCGACCCTCGATCTCGCACAAAATCATCCTCACGCCTCGCCGTTGAAGCCGACCAAACACCCCATTTCTCAGTCGACGCCATTTCTTCGCCGCGAAGGAAAACCCCTTCCCCTTCCATCCAGGACATCTTGTTTCTTTCTCCTTCCACTGTCGGAAAATCCAGGTCCCGTCTCGTGGATCGCTTCGAAATGAACGACGAAGTTCCGGAGCCCGCCGTCTCACGGAGAAGGTGTAGAAACCGTGGCCCCCAATTGGGTCTTATGGGTTGTGCTTCTCCGAGGAGTATTAGAAGGTCAAGAAGACGATCTGAGGTGGAGACTAGAGAAGAGAGAGATTTGTGTTTAGCGGAAGAGTTTGTGAAGGCTAGAAAGAGGAAACAGAGCGGGAGGTCGAAGAAGGAGAAGCTCAGTTTGGTTCCAGTTCCATCGACGCCTTCGAGTTCAACGACTCCAAAACTTGATAATGATGAGAATGGTAGTTTGGATCAAATTGGGCAGCTGATAACTGATCTGATAATGTGGAAAGATGTGGCTAAGTCAAGCCTTTGGTTTGGACTTGGCTCTTTGTTTTTCTTCTCCACTTGCTTCACTCGAGGAGTTAGCTTTAGCTCTAATATTGATAATTACAGCATTTTCTCAGCAATTTCCCAGCTTGGACTTCTGTTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCAAAGGTACAACTTCAAGCTTAAAGAAGATGACATAAAACGCTTGGTGAAACTGGTTCTTCCGGCTGCAAATTTCGCCATTTTCAAGATTCGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCTTGAAAGTAGCTCCATTTCTCATTTTAGGAGCTGAATATGGATATCTTATTACTCTTAGAAGACTCTGTGCAATTGGGTTCTTTAGCAGTTTCTCTGTGCCAAAGCTGTATACATGTTACCAGATTCAGATAAACAGCAAAGTGGATGCCGTAAAACAATGGATGTTTGAAGCATGGGAAGCTTGCTCACATAAGAAGGTTGTGATAGGATCAGCAGCCACAGCGTTTTGGAACTTTTCTTCCCTGAAGACCCGAATTTTCACAGCTTTCATTGTTCTAGTCATAGTTCGATACTGCCGGCAATTTATAGTGTCGTCAGAACCGGAAATTGAAGAAGTACAAGAGGATGAGAAGCAGGCATTGGTTGTGGTAGAAGCAGGCAAGGAGGAGGAGCAGAAGCAAGTTCAAGTGGTGGCGGAACCCCATTGTTAG

Protein sequence

MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREERDLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNSICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQVVAEPHC*
Homology
[Close]
BLAST of Csa6G157090 vs. Swiss-Prot
Match: RTNLQ_ARATH (Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 9.4e-98
Identity = 215/432 (49.77%), Postives = 281/432 (65.05%), Query Frame = 1 

Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAI-SSPRRKTPSPS----IQDILFL 60
           M+ TPP HRS+    TKS+SRL  ++   P+ S+D + SSP   TP+PS    ++DIL L
Sbjct: 1   MESTPPYHRSN----TKSASRLQ-DSSNPPNLSLDLVLSSPN--TPNPSSPVPLRDILLL 60

Query: 61  SPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVE 120
            PS + KSR+RL DR EM  E    AV R+R + +G Q  L+  ASPR+ RRSRRRSE  
Sbjct: 61  PPSPLRKSRTRLSDRLEMTSE-DAMAVVRKRGKGKGGQKSLL--ASPRNPRRSRRRSEAV 120

Query: 121 TREERDLCLAEEFVKA--RKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQI 180
             +E +L + EE VK   RKRK +GR KK+K S     S P   ++  L N     L+ I
Sbjct: 121 EEKEANLVI-EEIVKLPPRKRKTNGRPKKDKQS-----SAPPLCSSSDLPNTCQSDLNLI 180

Query: 181 GQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLG 240
           G++I+DL+MW+DVAKS+LWFG G L F S+CF +GV       N+S+FSA+S LGL+ L 
Sbjct: 181 GEIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGV-------NFSVFSAVSNLGLVLLC 240

Query: 241 LAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVA 300
            +F+SN++CQR N      F + EDD+ R  + VLPA NF I K  ELF GE  MTLKV 
Sbjct: 241 GSFLSNTLCQRKNEDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVT 300

Query: 301 PFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSH 360
           PFL+LGAEYG+LITL RL A GFF SF++PKLY+CY  QI+ KV+ VK  + EAW  CSH
Sbjct: 301 PFLLLGAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSH 360

Query: 361 KKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQ-EDEKQALVV 419
           KK++ GSA TAFWN +S++TRIF  FI+LVI RY RQ +  +  E+E V+ E E++ L  
Sbjct: 361 KKILAGSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQNLQLTPEEVEPVENEQEEETLPQ 409

[Close]
BLAST of Csa6G157090 vs. Swiss-Prot
Match: RTNLR_ARATH (Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2)

HSP 1 Score: 343.2 bits (879), Expect = 4.1e-93
Identity = 200/426 (46.95%), Postives = 273/426 (64.08%), Query Frame = 1 

Query: 4   TPPSHRSDPRS--RTKSSSRLAVEA---------------DQTPHFSVDAISSPRRKTPS 63
           TPPS RS+ RS  R   +++  V++               + TP+ S  ++SSP      
Sbjct: 6   TPPSLRSNTRSALRLARNNKTLVKSHIPSLDLVLLSPKNNNGTPYPSPVSLSSPSSPV-- 65

Query: 64  PSIQDILFLSPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIR 123
            ++++IL LSPS + KSR+RL +RF+M  E  E AV+ RR + +G Q GL+   SPR+ R
Sbjct: 66  -TLREILLLSPSPLRKSRTRLSNRFDM--EAAEAAVTARRSKTKGGQNGLLASPSPRNFR 125

Query: 124 RSRRRSE--VETREERDLCLA---EEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPK 183
           RSR RSE  V+T+E  +  +    E+    RK+K+ GRSKKEK S VP+ ++PS S+   
Sbjct: 126 RSRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSSVPLLASPSPSSDQP 185

Query: 184 LDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIF 243
            D  + G L++I + I+DLIMW+DVAKS+LWFG G + F STCF      ++   N+S+F
Sbjct: 186 QDVCQ-GDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCF------AAKGFNFSVF 245

Query: 244 SAISQLGLLFLGLAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKIREL 303
           SAIS LGLLFLG++F+SN++ QR         KL EDD+ R+ + +LP  N AI K  EL
Sbjct: 246 SAISYLGLLFLGVSFLSNTLRQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSEL 305

Query: 304 FCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVK 363
           F GE  MTLKVAPF+++GAEYGYLITL RLCA GFF SF++PKLY+CY  Q+N KV+  +
Sbjct: 306 FSGEPAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQ 365

Query: 364 QWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEE 402
           +   EAW  C+HKK V GSA TAFWN +SLKTR    FI++V++RY RQ +     + EE
Sbjct: 366 RRFVEAWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNLQLDSEDEEE 419

[Close]
BLAST of Csa6G157090 vs. Swiss-Prot
Match: RTNLS_ARATH (Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-36
Identity = 89/291 (30.58%), Postives = 158/291 (54.30%), Query Frame = 1 

Query: 134 RKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIG-QLITDLIMWKDVAKSSLW 193
           RK S    K   S+   P   +SST    + ++N +  Q   Q + DL+MW+DV++S+L 
Sbjct: 186 RKISPPVIKRATSVYSAPPNSTSSTDRFAEQEDNFTHSQSKLQSLVDLVMWRDVSRSTLV 245

Query: 194 FGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNSICQRYNFK---- 253
           FG G+    S+ +   +       N+S  S ++ +GL++LGL FV  S+  R   +    
Sbjct: 246 FGFGTFLIISSSYANDL-------NFSFISVVAYMGLIYLGLMFVLKSLIHRGMVEEERH 305

Query: 254 ----LKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLITLRR 313
               ++E+D+KR+++L++P  N ++ ++R LF G+   TLK+   L + A  G  ITL  
Sbjct: 306 KVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLKMGVVLFVLARCGSSITLWN 365

Query: 314 LCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFWNFSS 373
           L   GF  +F++PK++  Y    ++  +   +   +AWE+C+HKK V  +  T  WN SS
Sbjct: 366 LAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDAWESCNHKKAVALALFTLVWNLSS 425

Query: 374 LKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQ 416
           +  R++ AF++LV  RY +  ++ +  + ++ ++D ++     EA +E+EQ
Sbjct: 426 VTARVWAAFMLLVAFRYYQHKMIWTTDQADDDEDDNEEE----EAEEEKEQ 465

[Close]
BLAST of Csa6G157090 vs. TrEMBL
Match: A0A0A0KBW7_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_6G157090 PE=4 SV=1)

HSP 1 Score: 842.8 bits (2176), Expect = 1.8e-241
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 1 

Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60
           MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV
Sbjct: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60

Query: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120
           GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120

Query: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180
           DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180

Query: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240
           IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS
Sbjct: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240

Query: 241 ICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI 300
           ICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI
Sbjct: 241 ICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI 300

Query: 301 TLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFW 360
           TLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFW
Sbjct: 301 TLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFW 360

Query: 361 NFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQV 420
           NFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQV
Sbjct: 361 NFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQV 420

Query: 421 VAEPHC 427
           VAEPHC
Sbjct: 421 VAEPHC 426

[Close]
BLAST of Csa6G157090 vs. TrEMBL
Match: A0A067JJE5_JATCU (Reticulon-like protein OS=Jatropha curcas GN=JCGZ_25748 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 1.1e-126
Identity = 257/442 (58.14%), Postives = 316/442 (71.49%), Query Frame = 1 

Query: 1   MDFTPPSHRSDPRSRTKSSSRLA-----VEADQTPHFSVDAI-SSPRRKTPSPS------ 60
           MD TPPSH+S+P S+TKS+SRLA     VE ++ PH S+D I SS +R +P+PS      
Sbjct: 1   MDSTPPSHKSNPNSQTKSASRLARITYSVENEEPPHLSLDLIHSSAKRTSPTPSALSLKS 60

Query: 61  ------IQDILFLSPSTVGKSRSRLVDRFEMNDEVP-EPAVSRRRCRNRGPQLGLMGCAS 120
                  QD+L LSPS   K+R+RL DR EM +E   EP  SRRRC+++   L  MGCAS
Sbjct: 61  STNSLSFQDLLLLSPSP-RKARTRLADRLEMAEEAAMEPTGSRRRCKSKAAHLSSMGCAS 120

Query: 121 PRSIRRSRRRSEVETREERDLC-LAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTP 180
           PR  RRSRRRSE+E +E++DL  L EE  K RKR+ SGRSKKEKLSLVP  S PSSS +P
Sbjct: 121 PRHSRRSRRRSEIEIKEDKDLVGLVEEIGKVRKRRHSGRSKKEKLSLVP--SVPSSSPSP 180

Query: 181 KLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSI 240
           K++  +  +LD+IG +I DLIMWKDVAKSSLWFG G L F S+CF +G+SFS       +
Sbjct: 181 KVEAGDESNLDRIGIIIYDLIMWKDVAKSSLWFGFGCLCFLSSCFAKGISFS-------M 240

Query: 241 FSAISQLGLLFLGLAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKIRE 300
            SAISQLGLL LG +F+SNSIC+R N      FKLKE+DI +L +L+LP AN AI K RE
Sbjct: 241 LSAISQLGLLLLGASFISNSICRRSNVEKRSNFKLKEEDILKLGRLILPPANLAISKTRE 300

Query: 301 LFCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAV 360
           LF GE  MTLKV PFL+LGAEYG+L+TLRRLCA+G F  F++PKLY+CY  QIN KVD +
Sbjct: 301 LFSGEPSMTLKVIPFLLLGAEYGHLVTLRRLCALGLFIGFTIPKLYSCYSSQINQKVDYI 360

Query: 361 KQWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIE 417
           K  + EAWEACSHKK+V GSA TAFWN SS+KTRIF AFI LVI+R  RQ ++  E E  
Sbjct: 361 KSRILEAWEACSHKKIVAGSAITAFWNMSSVKTRIFAAFIFLVILRCFRQHLL-PEQEKG 420

[Close]
BLAST of Csa6G157090 vs. TrEMBL
Match: U5FMF4_POPTR (Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0017s04610g PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.2e-123
Identity = 259/452 (57.30%), Postives = 318/452 (70.35%), Query Frame = 1 

Query: 1   MDFTPPSHRSDPRSRTKSSSRLA-----VEAD-QTPHFSVDAISSPRRKTPSP------- 60
           MD TPPSHRS+P S+ KS+SRL+     +E + + P  S+D I S  +KTPS        
Sbjct: 1   MDTTPPSHRSNPNSQAKSASRLSRITYSIEPEAKPPQLSLDLIPSSEKKTPSSLSLKSST 60

Query: 61  ---SIQDILFLSPSTVGKSRSRLVDRFEMNDE-VPEPAVSRRRCRNRGPQLGLMGCASPR 120
               +Q+ L LSPS + KSR+RLVDR+EM +E V E   SRRRC++RG Q+G +GCASPR
Sbjct: 61  NSLPLQEQLLLSPSPLRKSRNRLVDRYEMPEEGVLEQNGSRRRCKSRGSQMGSLGCASPR 120

Query: 121 SIRRSRRRSEVETREERDLC-LAEEFVKARKRKQSGRSKKEK----LSLVPVPSTPSSST 180
           S RR RRR EVE+ EERDL    +E  K RKR+ SGRSKKEK    LSLVP  S PSSST
Sbjct: 121 SNRRLRRRLEVESMEERDLIGFVDEVGKVRKRRHSGRSKKEKEKEKLSLVP--SLPSSST 180

Query: 181 TPKLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNY 240
           TPK+D  +  +L++IG ++ DLIMWKDVAKSSLWFGLG L F S+CF +G+SFS      
Sbjct: 181 TPKVDEGDGVNLERIGMVVYDLIMWKDVAKSSLWFGLGCLCFLSSCFAKGISFS------ 240

Query: 241 SIFSAISQLGLLFLGLAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKI 300
            IFSAISQLGLLFLG++F+SNSICQR +      FKL E+DI R+ +L+LPAAN AI K 
Sbjct: 241 -IFSAISQLGLLFLGVSFLSNSICQRNSVEKLRKFKLTEEDILRVGRLILPAANLAILKT 300

Query: 301 RELFCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVD 360
           R+LF GE  MTLKV PFL+LGAEYG+L+TLRRLC IGFF SF++PKL+ CY  QIN KV+
Sbjct: 301 RDLFSGEPSMTLKVIPFLLLGAEYGHLVTLRRLCGIGFFISFTIPKLFACYSSQINQKVE 360

Query: 361 AVKQWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPE 420
            +K  M EAW AC HKK+V  SA TAFWN SS+KTRIFTAFI LVI+R CRQ ++ S+ E
Sbjct: 361 HLKCRMMEAWRACFHKKMVAASAVTAFWNLSSVKTRIFTAFISLVILRCCRQQLMPSQEE 420

Query: 421 --IEEVQEDEKQALVVVEAGKEEEQKQVQVVA 423
             ++  Q       V  EA  E+E KQ  V +
Sbjct: 421 GGLQPTQ-------VEGEAEGEQEPKQAGVAS 436

[Close]
BLAST of Csa6G157090 vs. TrEMBL
Match: B9RVU8_RICCO (Reticulon-like protein OS=Ricinus communis GN=RCOM_1173020 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 3.8e-122
Identity = 253/451 (56.10%), Postives = 320/451 (70.95%), Query Frame = 1 

Query: 1   MDFTPPSHRSDPRSRTKSSSRLA-----VEADQTPHFSVDAISSPR-RKTPS-PS----- 60
           MD TPPSHRS+P S+TKS+SRLA     ++ +++   S+D I SP  ++TPS PS     
Sbjct: 1   MDSTPPSHRSNPNSQTKSASRLARITSSIDNEESLRSSLDLILSPAPKRTPSTPSNLSLK 60

Query: 61  -------IQDILFLSPSTVGKSRSRLVDRFEMNDEVP-EPAVSRRRCRNRGPQLGLMGCA 120
                    ++L LSPS   KSR+RL DR ++ +E   EP  SRRRC++R  QLG     
Sbjct: 61  SCTNSLPFHELLLLSPSPSRKSRTRLADRLDIAEEAAMEPTGSRRRCKSRTAQLG----- 120

Query: 121 SPRSIRRSRRRSEVETREERDLC-LAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTT 180
           SPR  RRSRRRSE+E REE+DL  L EE  KARKR+ SGRSKKEKLSLVP  S PSS+ +
Sbjct: 121 SPRISRRSRRRSEMEIREEKDLLGLVEEIGKARKRRHSGRSKKEKLSLVP--SLPSSNPS 180

Query: 181 PKLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYS 240
           PK+ + + G+L++IG++I DLIMWKDVAKSSLWFG G L F S+CF +G+SFS       
Sbjct: 181 PKVGDCDGGNLNRIGRMIYDLIMWKDVAKSSLWFGFGCLCFLSSCFAKGISFS------- 240

Query: 241 IFSAISQLGLLFLGLAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKIR 300
           IFSAISQLGLLFLG +F+SNSICQR N      FKLKE+DI +L +L+LP AN AI   R
Sbjct: 241 IFSAISQLGLLFLGASFISNSICQRNNVESRCNFKLKEEDILKLGRLILPPANLAISMAR 300

Query: 301 ELFCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDA 360
           ELF GE  MTLKV PFL++GAEYG+LIT+ RLCAIGFF  F++PKLY+CY  QIN KVD 
Sbjct: 301 ELFSGEPSMTLKVIPFLLVGAEYGHLITMWRLCAIGFFIGFTIPKLYSCYSSQINQKVDY 360

Query: 361 VKQWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPE- 420
            +  + +AWEACSHKK+V  SA TAFWN SS+KTRIF AFI LVI+R CRQ ++ ++ E 
Sbjct: 361 ARGRVLDAWEACSHKKIVAASAITAFWNMSSVKTRIFAAFIFLVILRCCRQHMIPNQEEG 420

Query: 421 -IEEVQEDEKQALVVVEAGKEEEQKQVQVVA 423
             EE ++ ++Q     E G++E+Q+ + VVA
Sbjct: 421 QAEEGEQGQQQQQQEAEEGEQEQQQALVVVA 437

[Close]
BLAST of Csa6G157090 vs. TrEMBL
Match: M5VGG3_PRUPE (Reticulon-like protein OS=Prunus persica GN=PRUPE_ppa014722mg PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 3.8e-122
Identity = 252/447 (56.38%), Postives = 318/447 (71.14%), Query Frame = 1 

Query: 4   TPPSHR---SDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPS-----------I 63
           TPP H    S+P SRTKS+SRLA ++ Q PH S+  I+S  ++TPSPS           +
Sbjct: 8   TPPYHHHSHSEPPSRTKSASRLA-QSGQIPHLSLGLITSSPKRTPSPSAHSIRSSDSLPL 67

Query: 64  QDILFLSPSTVGK-SRSRLVDRFEMNDE-VPEPAVSRRRCRNRGPQLGLMGCASPRSIRR 123
           +++L LSPS + K S++RL DR EM DE + E A  RRRC++RG Q+GL+GCASPR+ RR
Sbjct: 68  RELLLLSPSPLRKRSKARLTDRLEMADEPMVEAAGPRRRCKSRGAQMGLLGCASPRNTRR 127

Query: 124 SRRRSEVETREERDLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDEN 183
           SRRRSE E RE++D  L EE  K RKR    RSKKEKLSLV    +PS+S++        
Sbjct: 128 SRRRSETEIREDKDSGLVEEIAKPRKR----RSKKEKLSLVLSLPSPSASSS-------- 187

Query: 184 GSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQL 243
            +LD+IGQL+ DLIMW+DVA+SSLWFGLGSLFF S+CF +G+       N+SIFSAISQL
Sbjct: 188 -NLDRIGQLMNDLIMWRDVARSSLWFGLGSLFFLSSCFAKGI-------NFSIFSAISQL 247

Query: 244 GLLFLGLAFVSNSICQR------YNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAE 303
           GLLFLG +FVSNSI QR       +F LKE DI  + K++LPA N AI K R LF GE  
Sbjct: 248 GLLFLGASFVSNSISQRNGVEKKLDFMLKESDILGVAKIILPATNLAISKTRALFSGEPS 307

Query: 304 MTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEA 363
           MTLKVAPF +LGAEYG+LITL RLC + FF SF++PKLY+CY IQ+N KV+ +K W+ EA
Sbjct: 308 MTLKVAPFFLLGAEYGHLITLWRLCMLAFFISFTIPKLYSCYSIQMNQKVECLKWWVLEA 367

Query: 364 WEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSS-EPEIEEVQEDE 423
           W ACSHKK+V  SAATAFWN SS++TRIFTAF+ LVI+RYCRQ +V   E    EV++++
Sbjct: 368 WGACSHKKIVAASAATAFWNLSSVRTRIFTAFLSLVILRYCRQHMVQPLENGEAEVEQEQ 427

[Close]
BLAST of Csa6G157090 vs. TAIR10
Match: AT2G20590.1 (AT2G20590.1 Reticulon family protein)

HSP 1 Score: 358.6 bits (919), Expect = 5.3e-99
Identity = 215/432 (49.77%), Postives = 281/432 (65.05%), Query Frame = 1 

Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAI-SSPRRKTPSPS----IQDILFL 60
           M+ TPP HRS+    TKS+SRL  ++   P+ S+D + SSP   TP+PS    ++DIL L
Sbjct: 1   MESTPPYHRSN----TKSASRLQ-DSSNPPNLSLDLVLSSPN--TPNPSSPVPLRDILLL 60

Query: 61  SPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVE 120
            PS + KSR+RL DR EM  E    AV R+R + +G Q  L+  ASPR+ RRSRRRSE  
Sbjct: 61  PPSPLRKSRTRLSDRLEMTSE-DAMAVVRKRGKGKGGQKSLL--ASPRNPRRSRRRSEAV 120

Query: 121 TREERDLCLAEEFVKA--RKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQI 180
             +E +L + EE VK   RKRK +GR KK+K S     S P   ++  L N     L+ I
Sbjct: 121 EEKEANLVI-EEIVKLPPRKRKTNGRPKKDKQS-----SAPPLCSSSDLPNTCQSDLNLI 180

Query: 181 GQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLG 240
           G++I+DL+MW+DVAKS+LWFG G L F S+CF +GV       N+S+FSA+S LGL+ L 
Sbjct: 181 GEIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGV-------NFSVFSAVSNLGLVLLC 240

Query: 241 LAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVA 300
            +F+SN++CQR N      F + EDD+ R  + VLPA NF I K  ELF GE  MTLKV 
Sbjct: 241 GSFLSNTLCQRKNEDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVT 300

Query: 301 PFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSH 360
           PFL+LGAEYG+LITL RL A GFF SF++PKLY+CY  QI+ KV+ VK  + EAW  CSH
Sbjct: 301 PFLLLGAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSH 360

Query: 361 KKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQ-EDEKQALVV 419
           KK++ GSA TAFWN +S++TRIF  FI+LVI RY RQ +  +  E+E V+ E E++ L  
Sbjct: 361 KKILAGSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQNLQLTPEEVEPVENEQEEETLPQ 409

[Close]
BLAST of Csa6G157090 vs. TAIR10
Match: AT4G28430.1 (AT4G28430.1 Reticulon family protein)

HSP 1 Score: 343.2 bits (879), Expect = 2.3e-94
Identity = 200/426 (46.95%), Postives = 273/426 (64.08%), Query Frame = 1 

Query: 4   TPPSHRSDPRS--RTKSSSRLAVEA---------------DQTPHFSVDAISSPRRKTPS 63
           TPPS RS+ RS  R   +++  V++               + TP+ S  ++SSP      
Sbjct: 6   TPPSLRSNTRSALRLARNNKTLVKSHIPSLDLVLLSPKNNNGTPYPSPVSLSSPSSPV-- 65

Query: 64  PSIQDILFLSPSTVGKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIR 123
            ++++IL LSPS + KSR+RL +RF+M  E  E AV+ RR + +G Q GL+   SPR+ R
Sbjct: 66  -TLREILLLSPSPLRKSRTRLSNRFDM--EAAEAAVTARRSKTKGGQNGLLASPSPRNFR 125

Query: 124 RSRRRSE--VETREERDLCLA---EEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPK 183
           RSR RSE  V+T+E  +  +    E+    RK+K+ GRSKKEK S VP+ ++PS S+   
Sbjct: 126 RSRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSSVPLLASPSPSSDQP 185

Query: 184 LDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIF 243
            D  + G L++I + I+DLIMW+DVAKS+LWFG G + F STCF      ++   N+S+F
Sbjct: 186 QDVCQ-GDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCF------AAKGFNFSVF 245

Query: 244 SAISQLGLLFLGLAFVSNSICQRYN------FKLKEDDIKRLVKLVLPAANFAIFKIREL 303
           SAIS LGLLFLG++F+SN++ QR         KL EDD+ R+ + +LP  N AI K  EL
Sbjct: 246 SAISYLGLLFLGVSFLSNTLRQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSEL 305

Query: 304 FCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVK 363
           F GE  MTLKVAPF+++GAEYGYLITL RLCA GFF SF++PKLY+CY  Q+N KV+  +
Sbjct: 306 FSGEPAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQ 365

Query: 364 QWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEE 402
           +   EAW  C+HKK V GSA TAFWN +SLKTR    FI++V++RY RQ +     + EE
Sbjct: 366 RRFVEAWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNLQLDSEDEEE 419

[Close]
BLAST of Csa6G157090 vs. TAIR10
Match: AT5G58000.1 (AT5G58000.1 Reticulon family protein)

HSP 1 Score: 155.6 bits (392), Expect = 6.8e-38
Identity = 89/291 (30.58%), Postives = 158/291 (54.30%), Query Frame = 1 

Query: 134 RKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIG-QLITDLIMWKDVAKSSLW 193
           RK S    K   S+   P   +SST    + ++N +  Q   Q + DL+MW+DV++S+L 
Sbjct: 186 RKISPPVIKRATSVYSAPPNSTSSTDRFAEQEDNFTHSQSKLQSLVDLVMWRDVSRSTLV 245

Query: 194 FGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNSICQRYNFK---- 253
           FG G+    S+ +   +       N+S  S ++ +GL++LGL FV  S+  R   +    
Sbjct: 246 FGFGTFLIISSSYANDL-------NFSFISVVAYMGLIYLGLMFVLKSLIHRGMVEEERH 305

Query: 254 ----LKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLITLRR 313
               ++E+D+KR+++L++P  N ++ ++R LF G+   TLK+   L + A  G  ITL  
Sbjct: 306 KVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLKMGVVLFVLARCGSSITLWN 365

Query: 314 LCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFWNFSS 373
           L   GF  +F++PK++  Y    ++  +   +   +AWE+C+HKK V  +  T  WN SS
Sbjct: 366 LAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDAWESCNHKKAVALALFTLVWNLSS 425

Query: 374 LKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQ 416
           +  R++ AF++LV  RY +  ++ +  + ++ ++D ++     EA +E+EQ
Sbjct: 426 VTARVWAAFMLLVAFRYYQHKMIWTTDQADDDEDDNEEE----EAEEEKEQ 465

[Close]
BLAST of Csa6G157090 vs. NCBI nr
Match: gi|700191779|gb|KGN46983.1| (hypothetical protein Csa_6G157090 [Cucumis sativus])

HSP 1 Score: 842.8 bits (2176), Expect = 2.6e-241
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 1 

Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60
           MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV
Sbjct: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60

Query: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120
           GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120

Query: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180
           DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180

Query: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240
           IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS
Sbjct: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240

Query: 241 ICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI 300
           ICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI
Sbjct: 241 ICQRYNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILGAEYGYLI 300

Query: 301 TLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFW 360
           TLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFW
Sbjct: 301 TLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIGSAATAFW 360

Query: 361 NFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQV 420
           NFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQV
Sbjct: 361 NFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEEEQKQVQV 420

Query: 421 VAEPHC 427
           VAEPHC
Sbjct: 421 VAEPHC 426

[Close]
BLAST of Csa6G157090 vs. NCBI nr
Match: gi|449463106|ref|XP_004149275.1| (PREDICTED: reticulon-like protein B17 [Cucumis sativus])

HSP 1 Score: 811.2 bits (2094), Expect = 8.5e-232
Identity = 418/433 (96.54%), Postives = 418/433 (96.54%), Query Frame = 1 

Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60
           MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV
Sbjct: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60

Query: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120
           GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120

Query: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180
           DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180

Query: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240
           IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSF       SIFSAISQLGLLFLGLAFVSNS
Sbjct: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSF-------SIFSAISQLGLLFLGLAFVSNS 240

Query: 241 ICQRYN-------FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG 300
           ICQR N       FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG
Sbjct: 241 ICQRNNDEKKHKDFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG 300

Query: 301 AEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIG 360
           AEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIG
Sbjct: 301 AEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIG 360

Query: 361 SAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEE 420
           SAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEE
Sbjct: 361 SAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEE 420

Query: 421 EQKQVQVVAEPHC 427
           EQKQVQVVAEPHC
Sbjct: 421 EQKQVQVVAEPHC 426

[Close]
BLAST of Csa6G157090 vs. NCBI nr
Match: gi|659094813|ref|XP_008448255.1| (PREDICTED: reticulon-like protein B17 [Cucumis melo])

HSP 1 Score: 766.5 bits (1978), Expect = 2.4e-218
Identity = 395/433 (91.22%), Postives = 405/433 (93.53%), Query Frame = 1 

Query: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60
           MD TPPSHRSDPRSR KSSSRLA EADQTPHFSVDAISSPRRKTPSPSIQD+LFLSPSTV
Sbjct: 1   MDLTPPSHRSDPRSRPKSSSRLAFEADQTPHFSVDAISSPRRKTPSPSIQDLLFLSPSTV 60

Query: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120
           GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVE REER
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVEIREER 120

Query: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180
           DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSST PKLDNDENGS D+IGQLITDL
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSST-PKLDNDENGSFDRIGQLITDL 180

Query: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240
           IMWKD AKSSLWFGLGSLFFFSTCFTRGVSFS       IFS ISQLGLLFLGLAFVSNS
Sbjct: 181 IMWKDAAKSSLWFGLGSLFFFSTCFTRGVSFS-------IFSTISQLGLLFLGLAFVSNS 240

Query: 241 ICQRYN-------FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG 300
           ICQR N       FKLKEDDIK LVKLVLPAANFAI KIRELFCGEAEMTLKVAPFLILG
Sbjct: 241 ICQRNNVEKKHKDFKLKEDDIKHLVKLVLPAANFAILKIRELFCGEAEMTLKVAPFLILG 300

Query: 301 AEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIG 360
           AEYG+LITLRRLCAIGFFSSFSVPKLY+CYQIQINSKVDAVKQW+FEAWEACSHKKVVIG
Sbjct: 301 AEYGHLITLRRLCAIGFFSSFSVPKLYSCYQIQINSKVDAVKQWLFEAWEACSHKKVVIG 360

Query: 361 SAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEEVQEDEKQALVVVEAGKEE 420
           SAAT FWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEI EVQEDE+QALVVVE+ +E+
Sbjct: 361 SAATVFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIVEVQEDERQALVVVESKEED 420

Query: 421 EQKQVQVVAEPHC 427
           +QKQVQVVAEPHC
Sbjct: 421 DQKQVQVVAEPHC 425

[Close]
BLAST of Csa6G157090 vs. NCBI nr
Match: gi|645245712|ref|XP_008229008.1| (PREDICTED: reticulon-like protein B17 [Prunus mume])

HSP 1 Score: 466.8 bits (1200), Expect = 3.9e-128
Identity = 263/448 (58.71%), Postives = 323/448 (72.10%), Query Frame = 1 

Query: 4   TPPSH---RSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPS-----------I 63
           TPP H   RS+P SRTKSSSRLA ++ Q PH S+  I+S  ++TPSPS           +
Sbjct: 8   TPPYHHHSRSEPPSRTKSSSRLA-QSGQIPHLSLGLITSSPKRTPSPSAHSIRSSDSLPL 67

Query: 64  QDILFLSPSTVGK-SRSRLVDRFEMNDE-VPEPAVSRRRCRNRGPQLGLMGCASPRSIRR 123
           +++L LSPS + K S++RL DR EM DE V E A  RRRC++RG Q+GL+GCASPR+ RR
Sbjct: 68  RELLLLSPSPLRKRSKTRLTDRLEMADEPVVEAAGPRRRCKSRGAQMGLLGCASPRNTRR 127

Query: 124 SRRRSEVETREERDLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDEN 183
           SRRRSE E RE++D  L EE  K RKR    RSKKEKLSLV    +PS+S+   +D++  
Sbjct: 128 SRRRSETEIREDKDSGLVEEIAKPRKR----RSKKEKLSLVLSLPSPSASS---IDDEYR 187

Query: 184 GSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQL 243
           GSLD+IGQL+ DLIMW+DVA+SSLWFGLGSLFF S+CF +G+       N+SIFSAISQL
Sbjct: 188 GSLDRIGQLMNDLIMWRDVARSSLWFGLGSLFFLSSCFAKGI-------NFSIFSAISQL 247

Query: 244 GLLFLGLAFVSNSICQR------YNFKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAE 303
           GLLFLG +FVSNSIC+R       +F LKE DI  + K++LPA N AI K R LF GE  
Sbjct: 248 GLLFLGASFVSNSICERNGVEKKLDFMLKESDILGVAKMILPATNLAISKTRALFSGEPS 307

Query: 304 MTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEA 363
           MTLKVAPF +LGAEYG+LITL RLC + FF SF++PKLY+CY IQ+N KVD +K W+ EA
Sbjct: 308 MTLKVAPFFLLGAEYGHLITLWRLCMLAFFISFTIPKLYSCYSIQMNQKVDCLKWWVMEA 367

Query: 364 WEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSS-EPEIEEVQEDE 423
           W ACSHKK+V  SAATAFWN SS++TRIFTAFI LVI+RYCRQ +V   E    EV++++
Sbjct: 368 WGACSHKKIVAASAATAFWNLSSVRTRIFTAFISLVILRYCRQHMVQPLENGEAEVEQEQ 427

[Close]
BLAST of Csa6G157090 vs. NCBI nr
Match: gi|802752382|ref|XP_012088231.1| (PREDICTED: reticulon-like protein B17 isoform X2 [Jatropha curcas])

HSP 1 Score: 461.8 bits (1187), Expect = 1.3e-126
Identity = 257/441 (58.28%), Postives = 316/441 (71.66%), Query Frame = 1 

Query: 1   MDFTPPSHRSDPRSRTKSSSRLA-----VEADQTPHFSVDAI-SSPRRKTPSPS------ 60
           MD TPPSH+S+P S+TKS+SRLA     VE ++ PH S+D I SS +R +P+PS      
Sbjct: 1   MDSTPPSHKSNPNSQTKSASRLARITYSVENEEPPHLSLDLIHSSAKRTSPTPSALSLKS 60

Query: 61  ------IQDILFLSPSTVGKSRSRLVDRFEMNDEVP-EPAVSRRRCRNRGPQLGLMGCAS 120
                  QD+L LSPS   K+R+RL DR EM +E   EP  SRRRC+++   L  MGCAS
Sbjct: 61  STNSLSFQDLLLLSPSP-RKARTRLADRLEMAEEAAMEPTGSRRRCKSKAAHLSSMGCAS 120

Query: 121 PRSIRRSRRRSEVETREERDLC-LAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTP 180
           PR  RRSRRRSE+E +E++DL  L EE  K RKR+ SGRSKKEKLSLVP  S PSSS +P
Sbjct: 121 PRHSRRSRRRSEIEIKEDKDLVGLVEEIGKVRKRRHSGRSKKEKLSLVP--SVPSSSPSP 180

Query: 181 KLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSI 240
           K++  +  +LD+IG +I DLIMWKDVAKSSLWFG G L F S+CF +G+SFS       +
Sbjct: 181 KVEAGDESNLDRIGIIIYDLIMWKDVAKSSLWFGFGCLCFLSSCFAKGISFS-------M 240

Query: 241 FSAISQLGLLFLGLAFVSNSICQ-----RYNFKLKEDDIKRLVKLVLPAANFAIFKIREL 300
            SAISQLGLL LG +F+SNSIC+     R NFKLKE+DI +L +L+LP AN AI K REL
Sbjct: 241 LSAISQLGLLLLGASFISNSICRSNVEKRSNFKLKEEDILKLGRLILPPANLAISKTREL 300

Query: 301 FCGEAEMTLKVAPFLILGAEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVK 360
           F GE  MTLKV PFL+LGAEYG+L+TLRRLCA+G F  F++PKLY+CY  QIN KVD +K
Sbjct: 301 FSGEPSMTLKVIPFLLLGAEYGHLVTLRRLCALGLFIGFTIPKLYSCYSSQINQKVDYIK 360

Query: 361 QWMFEAWEACSHKKVVIGSAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEE 417
             + EAWEACSHKK+V GSA TAFWN SS+KTRIF AFI LVI+R  RQ ++  E E  E
Sbjct: 361 SRILEAWEACSHKKIVAGSAITAFWNMSSVKTRIFAAFIFLVILRCFRQHLL-PEQEKGE 420

The following BLAST results are available for this feature:
BLAST of Csa6G157090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTNLQ_ARATH9.4e-9849.77Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1[more]
RTNLR_ARATH4.1e-9346.95Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2[more]
RTNLS_ARATH1.2e-3630.58Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2[more]
BLAST of Csa6G157090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBW7_CUCSA1.8e-241100.00Reticulon-like protein OS=Cucumis sativus GN=Csa_6G157090 PE=4 SV=1[more]
A0A067JJE5_JATCU1.1e-12658.14Reticulon-like protein OS=Jatropha curcas GN=JCGZ_25748 PE=4 SV=1[more]
U5FMF4_POPTR1.2e-12357.30Reticulon-like protein OS=Populus trichocarpa GN=POPTR_0017s04610g PE=4 SV=1[more]
B9RVU8_RICCO3.8e-12256.10Reticulon-like protein OS=Ricinus communis GN=RCOM_1173020 PE=4 SV=1[more]
M5VGG3_PRUPE3.8e-12256.38Reticulon-like protein OS=Prunus persica GN=PRUPE_ppa014722mg PE=4 SV=1[more]
BLAST of Csa6G157090 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G20590.15.3e-9949.77 Reticulon family protein[more]
AT4G28430.12.3e-9446.95 Reticulon family protein[more]
AT5G58000.16.8e-3830.58 Reticulon family protein[more]
BLAST of Csa6G157090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191779|gb|KGN46983.1|2.6e-241100.00hypothetical protein Csa_6G157090 [Cucumis sativus][more]
gi|449463106|ref|XP_004149275.1|8.5e-23296.54PREDICTED: reticulon-like protein B17 [Cucumis sativus][more]
gi|659094813|ref|XP_008448255.1|2.4e-21891.22PREDICTED: reticulon-like protein B17 [Cucumis melo][more]
gi|645245712|ref|XP_008229008.1|3.9e-12858.71PREDICTED: reticulon-like protein B17 [Prunus mume][more]
gi|802752382|ref|XP_012088231.1|1.3e-12658.28PREDICTED: reticulon-like protein B17 isoform X2 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003388Reticulon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0044425 membrane part
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU090377cucumber EST collection version 3.0transcribed_cluster
CU095771cucumber EST collection version 3.0transcribed_cluster
CU111038cucumber EST collection version 3.0transcribed_cluster
CU144424cucumber EST collection version 3.0transcribed_cluster
CU152560cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G157090.1Csa6G157090.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU090377CU090377transcribed_cluster
CU152560CU152560transcribed_cluster
CU111038CU111038transcribed_cluster
CU144424CU144424transcribed_cluster
CU095771CU095771transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003388ReticulonPFAMPF02453Reticuloncoord: 178..332
score: 1.4
IPR003388ReticulonPROFILEPS50845RETICULONcoord: 177..335
score: 11
NoneNo IPR availablePANTHERPTHR10994RETICULONcoord: 24..393
score: 1.4
NoneNo IPR availablePANTHERPTHR10994:SF61RETICULON-LIKE PROTEINcoord: 24..393
score: 1.4