Carg13595 (gene) Silver-seed gourd

Overview
NameCarg13595
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionReticulon-like protein
LocationCucurbita_argyrosperma_scaffold_053 : 433188 .. 435207 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATCAAAATCAAAACTCCAACAGTTCTCAAAATCTAAGACCCTCTAATCGTTACGATTCAGAAGTAAATTGTTTGAATCTTCTCCATGGATTTCACTCCTCCATCTCACAGATCCGAGGCTCGATCTCGCACAAAATCAGCCTCTCGCCTCGCAATCGAAGGCGACGAAATACCCCATTTCTCAGTCGACGCCATTTCTTCACCGCCCAAGAAATCCCCTTCCCCTTCCATACAAGACCTTTTGCTTCTCTCGCCTTCCACTCTCAGAAAATCCAGGTCTCGTCTCGTGGATCGCTTCGAAATGAACGACGAGGTTACAGACGCCGCCGCCGCACGCAGAAGGTGTAAAACTCGCGGCCCCCAAATAGGTTGTGCTTCTCCGAGGAGTGTGAGAAGGTCTAGAAGACGATCGGAAATGGAGATAAGAGAAGAGAAGGATTTGTGTTTGGCGGAAGAGTTCGTGAAGGCTAGAAAACGAAGGCCGAGTGGGAGATCGAAGAAGGAGAAGCTGAGTTTGGTTCCAGTTCCAACGACGCCTGTAAATTCAACTCCAAGTAATTCAAAGATTTCTCTATTCTCCTTTACTTGATATTCTCGATTGATTTGCGTTCTCTTTGTTCTGATTTGGCTCGTATGTGTTCTATAGAACTTGATAATGATGAGAATGGTAATCTGGATCGAATTGGGCAACTCATAACTGATCTGATCATGTGGAAAGATGCGGCGAAATCCAGCCTTTGGTTTGGATTTGGCTCTTTGTTTTTCTTATCCTCTTGCTTTGCTAGAGGAGCTAGCTTCAGGTCTGGCTCTCTAATCCTTAACCATTATAGCTTTCTACGAGTATATGATCATTCAAGAACAGTTCTAATACCGATAATTACAGCATTTTCTCAGCGATTTCCCAGCTTGGACTTCTGCTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCGAAGGTACAGTTTCTTGACTATAATCAATCGCATCAAAACCCCACCAATCTTCGTTCTTGATGGAATATATGAATTTGTAGGAACAACGTGGAAAAGAAACATAATGACTTCAAGCTTAAAGAAGATGACATCCTACGCATGGCGAAATTGATTCTTCCAGCTGCAAACTTCGCCATTGCTAAGATAAGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCCTGAAAGTAACCACAAAGCTCCTCATCTTTGATCATTCAATAATGTCTATTAACCAATCATTTGAACGCTTAAATGATCCAAAACTTTCTGGGTTTGCAGGTCGCTCCATTCCTCATATTAGGAGCTGAGTATGGACATCTTATTACACTTAGAAGACTTTGTGCAATTGGTATAAACTATTACAATAATCATTTCAAAACCTGCTTGAAATTCTCTATTGATTTAATCTCCATATATACAGGGTTCTTTACCAGTTTCTCTGTGCCAAAGCTATACTCATGTTACCAAATTCAGATTAACAGCAAAGGTAAATAGAAATTCTAGGAACACCCACTTAAAAACATTGCTTCTTCTGCATTTTGTATTATGATATGATGCTGAAGAAATCATGGGGTTTGGGTTTTTATAGTCGACGTCGTGAAGCGACGGTTGTTTGAAGCATGGAAAGCTTGCTCACATAAGAAGGTTGTGGTAGGATCAGCAGCCACAGTGTTTTGGAACCTTTCTTCCCTAAAGACCAGAATTTTCACAGGTGAAATTCTTTGAGATGTTGTCAATGTGTTCATTTTCCATTCAGGAAATAATGATTGTTAAGCTGTGTAAGATTTTCTTGTTGCAGCTTTCATAGCTGTAGTTATAGTTCGATACTGCCGGCAATTTATAGTGCTGGCACCGGAAGTTGTAGAAGCACAAGAAGAGGAGAACCAGGCGGTGGTTCTGGTAGAAGGGAAGGAGGAGGAGGAGGAGGAGCAGAGGCAGGCTCTGGTGGTGGCGGAAGCCCATGGCCAGCCTTGATTTTGGCTTTATCATATTGTAATAATAGAAATGGCTGTGTGTTGTGTT

mRNA sequence

AAAATCAAAATCAAAACTCCAACAGTTCTCAAAATCTAAGACCCTCTAATCGTTACGATTCAGAAGTAAATTGTTTGAATCTTCTCCATGGATTTCACTCCTCCATCTCACAGATCCGAGGCTCGATCTCGCACAAAATCAGCCTCTCGCCTCGCAATCGAAGGCGACGAAATACCCCATTTCTCAGTCGACGCCATTTCTTCACCGCCCAAGAAATCCCCTTCCCCTTCCATACAAGACCTTTTGCTTCTCTCGCCTTCCACTCTCAGAAAATCCAGGTCTCGTCTCGTGGATCGCTTCGAAATGAACGACGAGGTTACAGACGCCGCCGCCGCACGCAGAAGGTGTAAAACTCGCGGCCCCCAAATAGGTTGTGCTTCTCCGAGGAGTGTGAGAAGGTCTAGAAGACGATCGGAAATGGAGATAAGAGAAGAGAAGGATTTGTGTTTGGCGGAAGAGTTCGTGAAGGCTAGAAAACGAAGGCCGAGTGGGAGATCGAAGAAGGAGAAGCTGAGTTTGGTTCCAGTTCCAACGACGCCTGTAAATTCAACTCCAAAACTTGATAATGATGAGAATGGTAATCTGGATCGAATTGGGCAACTCATAACTGATCTGATCATGTGGAAAGATGCGGCGAAATCCAGCCTTTGGTTTGGATTTGGCTCTTTGTTTTTCTTATCCTCTTGCTTTGCTAGAGGAGCTAGCTTCAGCATTTTCTCAGCGATTTCCCAGCTTGGACTTCTGCTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCGAAGGAACAACGTGGAAAAGAAACATAATGACTTCAAGCTTAAAGAAGATGACATCCTACGCATGGCGAAATTGATTCTTCCAGCTGCAAACTTCGCCATTGCTAAGATAAGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCCTGAAAGTCGCTCCATTCCTCATATTAGGAGCTGAGTATGGACATCTTATTACACTTAGAAGACTTTGTGCAATTGGGTTCTTTACCAGTTTCTCTGTGCCAAAGCTATACTCATGTTACCAAATTCAGATTAACAGCAAAGTCGACGTCGTGAAGCGACGGTTGTTTGAAGCATGGAAAGCTTGCTCACATAAGAAGGTTGTGGTAGGATCAGCAGCCACAGTGTTTTGGAACCTTTCTTCCCTAAAGACCAGAATTTTCACAGCTTTCATAGCTGTAGTTATAGTTCGATACTGCCGGCAATTTATAGTGCTGGCACCGGAAGTTGTAGAAGCACAAGAAGAGGAGAACCAGGCGGTGGTTCTGGTAGAAGGGAAGGAGGAGGAGGAGGAGGAGCAGAGGCAGGCTCTGGTGGTGGCGGAAGCCCATGGCCAGCCTTGATTTTGGCTTTATCATATTGTAATAATAGAAATGGCTGTGTGTTGTGTT

Coding sequence (CDS)

ATGGATTTCACTCCTCCATCTCACAGATCCGAGGCTCGATCTCGCACAAAATCAGCCTCTCGCCTCGCAATCGAAGGCGACGAAATACCCCATTTCTCAGTCGACGCCATTTCTTCACCGCCCAAGAAATCCCCTTCCCCTTCCATACAAGACCTTTTGCTTCTCTCGCCTTCCACTCTCAGAAAATCCAGGTCTCGTCTCGTGGATCGCTTCGAAATGAACGACGAGGTTACAGACGCCGCCGCCGCACGCAGAAGGTGTAAAACTCGCGGCCCCCAAATAGGTTGTGCTTCTCCGAGGAGTGTGAGAAGGTCTAGAAGACGATCGGAAATGGAGATAAGAGAAGAGAAGGATTTGTGTTTGGCGGAAGAGTTCGTGAAGGCTAGAAAACGAAGGCCGAGTGGGAGATCGAAGAAGGAGAAGCTGAGTTTGGTTCCAGTTCCAACGACGCCTGTAAATTCAACTCCAAAACTTGATAATGATGAGAATGGTAATCTGGATCGAATTGGGCAACTCATAACTGATCTGATCATGTGGAAAGATGCGGCGAAATCCAGCCTTTGGTTTGGATTTGGCTCTTTGTTTTTCTTATCCTCTTGCTTTGCTAGAGGAGCTAGCTTCAGCATTTTCTCAGCGATTTCCCAGCTTGGACTTCTGCTTTTGGGTCTTGCATTTGTCTCCAATTCAATCTGTCGAAGGAACAACGTGGAAAAGAAACATAATGACTTCAAGCTTAAAGAAGATGACATCCTACGCATGGCGAAATTGATTCTTCCAGCTGCAAACTTCGCCATTGCTAAGATAAGGGAGCTTTTCTGTGGAGAGGCAGAGATGACCCTGAAAGTCGCTCCATTCCTCATATTAGGAGCTGAGTATGGACATCTTATTACACTTAGAAGACTTTGTGCAATTGGGTTCTTTACCAGTTTCTCTGTGCCAAAGCTATACTCATGTTACCAAATTCAGATTAACAGCAAAGTCGACGTCGTGAAGCGACGGTTGTTTGAAGCATGGAAAGCTTGCTCACATAAGAAGGTTGTGGTAGGATCAGCAGCCACAGTGTTTTGGAACCTTTCTTCCCTAAAGACCAGAATTTTCACAGCTTTCATAGCTGTAGTTATAGTTCGATACTGCCGGCAATTTATAGTGCTGGCACCGGAAGTTGTAGAAGCACAAGAAGAGGAGAACCAGGCGGTGGTTCTGGTAGAAGGGAAGGAGGAGGAGGAGGAGGAGCAGAGGCAGGCTCTGGTGGTGGCGGAAGCCCATGGCCAGCCTTGA

Protein sequence

MDFTPPSHRSEARSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTLRKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLLLGLAFVSNSICRRNNVEKKHNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSSLKTRIFTAFIAVVIVRYCRQFIVLAPEVVEAQEEENQAVVLVEGKEEEEEEQRQALVVAEAHGQP
Homology
[Close]
BLAST of Carg13595 vs. NCBI nr
Match: XP_022947074.1 (reticulon-like protein B17 [Cucurbita moschata])

HSP 1 Score: 739.6 bits (1908), Expect = 6.1e-210
Identity = 385/390 (98.72%), Postives = 387/390 (99.23%), Query Frame = 0 

Query: 1   MDFTPPSHRSEARSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60
           MDFTPPSHRSE RSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDL LLSPSTL
Sbjct: 1   MDFTPPSHRSETRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLFLLSPSTL 60

Query: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC 120
           RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC
Sbjct: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDLC 120

Query: 121 LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK 180
           LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK
Sbjct: 121 LAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMWK 180

Query: 181 DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLLLGLAFVSNSICRRNNVEKKH 240
           DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLL LGLAFVSNSICRRNNVEKKH
Sbjct: 181 DAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEKKH 240

Query: 241 NDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR 300
           NDFKLKE+DILRMAKLILPAANFAI+KIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR
Sbjct: 241 NDFKLKEEDILRMAKLILPAANFAISKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRR 300

Query: 301 LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS 360
           LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS
Sbjct: 301 LCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSS 360

Query: 361 LKTRIFTAFIAVVIVRYCRQFIVLAPEVVE 391
           LKTRIFTAFIAVVIVRYCRQFIVLAPEVVE
Sbjct: 361 LKTRIFTAFIAVVIVRYCRQFIVLAPEVVE 390

[Close]
BLAST of Carg13595 vs. NCBI nr
Match: XP_023533892.1 (reticulon-like protein B17 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 732.3 bits (1889), Expect = 9.7e-208
Identity = 383/392 (97.70%), Postives = 387/392 (98.72%), Query Frame = 0 

Query: 1   MDFTPPSHRSEARSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60
           MDFTPPSHRSE RSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL
Sbjct: 1   MDFTPPSHRSEPRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60

Query: 61  RKSRSRLVDRFEMNDEVTD--AAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKD 120
           RKSRSRLVDRFEMNDEVTD  AAAARRRCKTRGPQIGCASPRSVRRSRRRSE+EIREEKD
Sbjct: 61  RKSRSRLVDRFEMNDEVTDAAAAAARRRCKTRGPQIGCASPRSVRRSRRRSELEIREEKD 120

Query: 121 LCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIM 180
           LCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTP+NSTPKLDNDENGNLDRIGQLITDLIM
Sbjct: 121 LCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPINSTPKLDNDENGNLDRIGQLITDLIM 180

Query: 181 WKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLLLGLAFVSNSICRRNNVEK 240
           WKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLL LGLAFVSNSICRRNNVEK
Sbjct: 181 WKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVEK 240

Query: 241 KHNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLITL 300
           KHN+FKLKEDDILRMAKLILPAANFAI KIRELFCGEAEMTLKVAPFLILGAEYGHLITL
Sbjct: 241 KHNEFKLKEDDILRMAKLILPAANFAIDKIRELFCGEAEMTLKVAPFLILGAEYGHLITL 300

Query: 301 RRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNL 360
           RRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNL
Sbjct: 301 RRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNL 360

Query: 361 SSLKTRIFTAFIAVVIVRYCRQFIVLAPEVVE 391
           SSLKTRIFTAFIAVVIVRYCRQF+VLAPEVVE
Sbjct: 361 SSLKTRIFTAFIAVVIVRYCRQFLVLAPEVVE 392

[Close]
BLAST of Carg13595 vs. NCBI nr
Match: XP_022971163.1 (reticulon-like protein B17 [Cucurbita maxima])

HSP 1 Score: 731.1 bits (1886), Expect = 2.2e-207
Identity = 382/389 (98.20%), Postives = 385/389 (98.97%), Query Frame = 0 

Query: 1   MDFTPPSHRSEARSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60
           MDFTPPSHRSE RSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL
Sbjct: 1   MDFTPPSHRSEPRSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60

Query: 61  RKSRSRLVDRFEMNDEVTD-AAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDL 120
           RKSRSRLVDRFEMNDEVTD AAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDL
Sbjct: 61  RKSRSRLVDRFEMNDEVTDAAAAARRRCKTRGPQIGCASPRSVRRSRRRSEMEIREEKDL 120

Query: 121 CLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLIMW 180
           CLAEEFVKARKRRPSGRSKKEKLSLVPVPT+P+NSTPKLDNDENGNLDRIGQLITDLIMW
Sbjct: 121 CLAEEFVKARKRRPSGRSKKEKLSLVPVPTSPINSTPKLDNDENGNLDRIGQLITDLIMW 180

Query: 181 KDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLLLGLAFVSNSICRRNNVEKK 240
           KDA KSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLL LGLAFVSNSICRRNNVE+K
Sbjct: 181 KDATKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLFLGLAFVSNSICRRNNVERK 240

Query: 241 HNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLITLR 300
           HNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLITLR
Sbjct: 241 HNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLITLR 300

Query: 301 RLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLS 360
           RLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLS
Sbjct: 301 RLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLS 360

Query: 361 SLKTRIFTAFIAVVIVRYCRQFIVLAPEV 389
           SLKTRIFTAFIAVVIVRYCRQFIVLAPEV
Sbjct: 361 SLKTRIFTAFIAVVIVRYCRQFIVLAPEV 389

[Close]
BLAST of Carg13595 vs. NCBI nr
Match: XP_008448255.1 (PREDICTED: reticulon-like protein B17 [Cucumis melo])

HSP 1 Score: 639.0 bits (1647), Expect = 1.1e-179
Identity = 330/394 (83.76%), Postives = 358/394 (90.86%), Query Frame = 0 

Query: 1   MDFTPPSHRSEARSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60
           MD TPPSHRS+ RSR KS+SRLA E D+ PHFSVDAISSP +K+PSPSIQDLL LSPST+
Sbjct: 1   MDLTPPSHRSDPRSRPKSSSRLAFEADQTPHFSVDAISSPRRKTPSPSIQDLLFLSPSTV 60

Query: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQI---GCASPRSVRRSRRRSEMEIREEK 120
            KSRSRLVDRFEMNDEV + A +RRRC+ RGPQ+   GCASPRS+RRSRRRSE+EIREE+
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVEIREER 120

Query: 121 DLCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLI 180
           DLCLAEEFVKARKR+ SGRSKKEKLSLVPVP+TP +STPKLDNDENG+ DRIGQLITDLI
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTPKLDNDENGSFDRIGQLITDLI 180

Query: 181 MWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLLLGLAFVSNSICRRNNVE 240
           MWKDAAKSSLWFG GSLFF S+CF RG SFSIFS ISQLGLL LGLAFVSNSIC+RNNVE
Sbjct: 181 MWKDAAKSSLWFGLGSLFFFSTCFTRGVSFSIFSTISQLGLLFLGLAFVSNSICQRNNVE 240

Query: 241 KKHNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLIT 300
           KKH DFKLKEDDI  + KL+LPAANFAI KIRELFCGEAEMTLKVAPFLILGAEYGHLIT
Sbjct: 241 KKHKDFKLKEDDIKHLVKLVLPAANFAILKIRELFCGEAEMTLKVAPFLILGAEYGHLIT 300

Query: 301 LRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWN 360
           LRRLCAIGFF+SFSVPKLYSCYQIQINSKVD VK+ LFEAW+ACSHKKVV+GSAATVFWN
Sbjct: 301 LRRLCAIGFFSSFSVPKLYSCYQIQINSKVDAVKQWLFEAWEACSHKKVVIGSAATVFWN 360

Query: 361 LSSLKTRIFTAFIAVVIVRYCRQFIVLA-PEVVE 391
            SSLKTRIFTAFI +VIVRYCRQFIV + PE+VE
Sbjct: 361 FSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIVE 394

[Close]
BLAST of Carg13595 vs. NCBI nr
Match: XP_022149569.1 (reticulon-like protein B17 [Momordica charantia])

HSP 1 Score: 638.3 bits (1645), Expect = 1.9e-179
Identity = 336/393 (85.50%), Postives = 356/393 (90.59%), Query Frame = 0 

Query: 1   MDFTPPSHRSEARSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60
           MDFTPPSHRSE RSRTKSASRLAIE D IPHFSVDAISSPPKK+ SPSIQDLLLLSP ++
Sbjct: 44  MDFTPPSHRSEPRSRTKSASRLAIEDDGIPHFSVDAISSPPKKNSSPSIQDLLLLSPYSM 103

Query: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQ---IGCASPRSVRRSRRRSEMEIREEK 120
           RKSRSRLVDRFEMN+EV +AA ARRRCK RGPQ   +GC SPRSVRRSRRRS+MEIREEK
Sbjct: 104 RKSRSRLVDRFEMNEEVMEAAGARRRCKNRGPQMGLLGCVSPRSVRRSRRRSDMEIREEK 163

Query: 121 DLCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLI 180
           DLCLAEEF KARKRR SGRSKKEKLSLVP+   P +STPKL++D+NG+LDR+GQLI DLI
Sbjct: 164 DLCLAEEFAKARKRRQSGRSKKEKLSLVPLALAPSSSTPKLESDDNGSLDRVGQLIADLI 223

Query: 181 MWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLLLGLAFVSNSICRRNNVE 240
           MWKDAAKSSLWFG GSLFFLSSCFARG SFSIFSAISQLGLL LGLAFVSNSIC+RN  E
Sbjct: 224 MWKDAAKSSLWFGIGSLFFLSSCFARGVSFSIFSAISQLGLLFLGLAFVSNSICQRNIEE 283

Query: 241 KKHNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLIT 300
           KKH DFKLKEDDILR+ KLILPAANFAI+KIRELF GE  MTLKVAPFLILGAEYGHLIT
Sbjct: 284 KKHKDFKLKEDDILRLVKLILPAANFAISKIRELFSGEPSMTLKVAPFLILGAEYGHLIT 343

Query: 301 LRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWN 360
           LRRLCAIGFFTSFSVPKLYSCYQIQINSKVD V R LFEAW+ACSHKK+VVGSAATVFWN
Sbjct: 344 LRRLCAIGFFTSFSVPKLYSCYQIQINSKVDFVIRWLFEAWEACSHKKIVVGSAATVFWN 403

Query: 361 LSSLKTRIFTAFIAVVIVRYCRQFIVLAPEVVE 391
            SSLKTRIFTAFIA+VIVRYCRQFIV   EV E
Sbjct: 404 FSSLKTRIFTAFIALVIVRYCRQFIVPESEVAE 436

[Close]
BLAST of Carg13595 vs. TAIR10
Match: AT2G20590.1 (Reticulon family protein)

HSP 1 Score: 353.2 bits (905), Expect = 2.2e-97
Identity = 215/398 (54.02%), Postives = 273/398 (68.59%), Query Frame = 0 

Query: 1   MDFTPPSHRSEARSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPS----IQDLLLLS 60
           M+ TPP H    RS TKSASRL  +    P+ S+D + S P  +P+PS    ++D+LLL 
Sbjct: 1   MESTPPYH----RSNTKSASRLQ-DSSNPPNLSLDLVLSSP-NTPNPSSPVPLRDILLLP 60

Query: 61  PSTLRKSRSRLVDRFEMNDEVTDA-AAARRRCKTRGPQIG-CASPRSVRRSRRRSEMEIR 120
           PS LRKSR+RL DR EM  E  DA A  R+R K +G Q    ASPR+ RRSRRRSE    
Sbjct: 61  PSPLRKSRTRLSDRLEMTSE--DAMAVVRKRGKGKGGQKSLLASPRNPRRSRRRSEAVEE 120

Query: 121 EEKDLCLAEEFVK--ARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQL 180
           +E +L + EE VK   RKR+ +GR K            P+ S+  L N    +L+ IG++
Sbjct: 121 KEANLVI-EEIVKLPPRKRKTNGRPK----XXXXXXXXPLCSSSDLPNTCQSDLNLIGEI 180

Query: 181 ITDLIMWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLLLGLAFVSNSICR 240
           I+DL+MW+D AKS+LWFGFG L FLSSCFA+G +FS+FSA+S LGL+LL  +F+SN++C+
Sbjct: 181 ISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTLCQ 240

Query: 241 RNNVEKKHNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEY 300
           R N + K   F + EDD+LR A+ +LPA NF I+K  ELF GE  MTLKV PFL+LGAEY
Sbjct: 241 RKNEDTK-RAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLGAEY 300

Query: 301 GHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAA 360
           GHLITL RL A GFF SF++PKLYSCY  QI+ KV+ VK R+ EAW  CSHKK++ GSA 
Sbjct: 301 GHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILAGSAV 360

Query: 361 TVFWNLSSLKTRIFTAFIAVVIVRYCRQFIVLAPEVVE 391
           T FWNL+S++TRIF  FI +VI RY RQ + L PE VE
Sbjct: 361 TAFWNLTSIRTRIFAVFIILVIFRYRRQNLQLTPEEVE 384

[Close]
BLAST of Carg13595 vs. TAIR10
Match: AT4G28430.1 (Reticulon family protein)

HSP 1 Score: 283.5 bits (724), Expect = 2.2e-76
Identity = 180/391 (46.04%), Postives = 239/391 (61.13%), Query Frame = 0 

Query: 4   TPPSHRSEARSRTKSA-SRLAIEGDEIPHFSVDAISSPPKKS-----PSP---------- 63
           TPPS RS  RS  + A +   +    IP  S+D +   PK +     PSP          
Sbjct: 6   TPPSLRSNTRSALRLARNNKTLVKSHIP--SLDLVLLSPKNNNGTPYPSPVSLSSPSSPV 65

Query: 64  SIQDLLLLSPSTLRKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIG---CASPRSVRR 123
           +++++LLLSPS LRKSR+RL +RF+M  E  +AA   RR KT+G Q G     SPR+ RR
Sbjct: 66  TLREILLLSPSPLRKSRTRLSNRFDM--EAAEAAVTARRSKTKGGQNGLLASPSPRNFRR 125

Query: 124 SRRRSEMEIREEKD-----LCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLD 183
           SR RSE  +  +++     +   E+          GRSKKEK S VP+  +P  S+ +  
Sbjct: 126 SRLRSEAMVDTKENTEPIVVVTDEKKQNXXXXXKLGRSKKEKHSSVPLLASPSPSSDQPQ 185

Query: 184 NDENGNLDRIGQLITDLIMWKDAAKSSLWFGFGSLFFLSSCF-ARGASFSIFSAISQLGL 243
           +   G+L+RI + I+DLIMW+D AKS+LWFGFG + FLS+CF A+G +FS          
Sbjct: 186 DVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSXXXXXXXXXX 245

Query: 244 LLLGLAFVSNSICRRNNVEKKHNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEM 303
                   SN++ R+   E+   + KL EDD+LR+A+ +LP  N AI+K  ELF GE  M
Sbjct: 246 XXXXXXXXSNTL-RQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSELFSGEPAM 305

Query: 304 TLKVAPFLILGAEYGHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAW 363
           TLKVAPF+++GAEYG+LITL RLCA GFF SF++PKLYSCY  Q+N KV+  +RR  EAW
Sbjct: 306 TLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQRRFVEAW 365

Query: 364 KACSHKKVVVGSAATVFWNLSSLKTRIFTAF 370
             C+HKK V GSA T FWNL+SLKTR    F
Sbjct: 366 GVCTHKKFVAGSAVTAFWNLTSLKTRFIAVF 391

[Close]
BLAST of Carg13595 vs. TAIR10
Match: AT5G58000.1 (Reticulon family protein)

HSP 1 Score: 154.5 bits (389), Expect = 1.5e-37
Identity = 85/242 (35.12%), Postives = 139/242 (57.44%), Query Frame = 0 

Query: 139 KEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQL--ITDLIMWKDAAKSSLWFGFGSLFF 198
           K   S+   P    +ST +    E+       +L  + DL+MW+D ++S+L FGFG+   
Sbjct: 194 KRATSVYSAPPNSTSSTDRFAEQEDNFTHSQSKLQSLVDLVMWRDVSRSTLVFGFGTFLI 253

Query: 199 LSSCFARGASFSIFSAISQLGLLLLGLAFVSNSICRRNNV-EKKHNDFKLKEDDILRMAK 258
           +SS +A   +FS  S ++ +GL+ LGL FV  S+  R  V E++H    ++E+D+ RM +
Sbjct: 254 ISSSYANDLNFSFISVVAYMGLIYLGLMFVLKSLIHRGMVEEERHKVVGVREEDVKRMLR 313

Query: 259 LILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRRLCAIGFFTSFSVPKL 318
           LI+P  N ++ ++R LF G+   TLK+   L + A  G  ITL  L   GF  +F++PK+
Sbjct: 314 LIMPYLNESLHQLRALFSGDPSTTLKMGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKI 373

Query: 319 YSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSSLKTRIFTAFIAVVIV 378
           +  Y    ++  +   RR  +AW++C+HKK V  +  T+ WNLSS+  R++ AF+ +V  
Sbjct: 374 FISYSTHFSAYGNFWMRRFRDAWESCNHKKAVALALFTLVWNLSSVTARVWAAFMLLVAF 433

[Close]
BLAST of Carg13595 vs. Swiss-Prot
Match: sp|Q6DR04|RTNLQ_ARATH (Reticulon-like protein B17 OS=Arabidopsis thaliana OX=3702 GN=RTNLB17 PE=2 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 4.0e-96
Identity = 215/398 (54.02%), Postives = 273/398 (68.59%), Query Frame = 0 

Query: 1   MDFTPPSHRSEARSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPS----IQDLLLLS 60
           M+ TPP H    RS TKSASRL  +    P+ S+D + S P  +P+PS    ++D+LLL 
Sbjct: 1   MESTPPYH----RSNTKSASRLQ-DSSNPPNLSLDLVLSSP-NTPNPSSPVPLRDILLLP 60

Query: 61  PSTLRKSRSRLVDRFEMNDEVTDA-AAARRRCKTRGPQIG-CASPRSVRRSRRRSEMEIR 120
           PS LRKSR+RL DR EM  E  DA A  R+R K +G Q    ASPR+ RRSRRRSE    
Sbjct: 61  PSPLRKSRTRLSDRLEMTSE--DAMAVVRKRGKGKGGQKSLLASPRNPRRSRRRSEAVEE 120

Query: 121 EEKDLCLAEEFVK--ARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQL 180
           +E +L + EE VK   RKR+ +GR K            P+ S+  L N    +L+ IG++
Sbjct: 121 KEANLVI-EEIVKLPPRKRKTNGRPK----XXXXXXXXPLCSSSDLPNTCQSDLNLIGEI 180

Query: 181 ITDLIMWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLLLGLAFVSNSICR 240
           I+DL+MW+D AKS+LWFGFG L FLSSCFA+G +FS+FSA+S LGL+LL  +F+SN++C+
Sbjct: 181 ISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTLCQ 240

Query: 241 RNNVEKKHNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEY 300
           R N + K   F + EDD+LR A+ +LPA NF I+K  ELF GE  MTLKV PFL+LGAEY
Sbjct: 241 RKNEDTK-RAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLGAEY 300

Query: 301 GHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAA 360
           GHLITL RL A GFF SF++PKLYSCY  QI+ KV+ VK R+ EAW  CSHKK++ GSA 
Sbjct: 301 GHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILAGSAV 360

Query: 361 TVFWNLSSLKTRIFTAFIAVVIVRYCRQFIVLAPEVVE 391
           T FWNL+S++TRIF  FI +VI RY RQ + L PE VE
Sbjct: 361 TAFWNLTSIRTRIFAVFIILVIFRYRRQNLQLTPEEVE 384

[Close]
BLAST of Carg13595 vs. Swiss-Prot
Match: sp|Q8LDS3|RTNLR_ARATH (Reticulon-like protein B18 OS=Arabidopsis thaliana OX=3702 GN=RTNLB18 PE=2 SV=2)

HSP 1 Score: 283.5 bits (724), Expect = 3.9e-75
Identity = 180/391 (46.04%), Postives = 239/391 (61.13%), Query Frame = 0 

Query: 4   TPPSHRSEARSRTKSA-SRLAIEGDEIPHFSVDAISSPPKKS-----PSP---------- 63
           TPPS RS  RS  + A +   +    IP  S+D +   PK +     PSP          
Sbjct: 6   TPPSLRSNTRSALRLARNNKTLVKSHIP--SLDLVLLSPKNNNGTPYPSPVSLSSPSSPV 65

Query: 64  SIQDLLLLSPSTLRKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQIG---CASPRSVRR 123
           +++++LLLSPS LRKSR+RL +RF+M  E  +AA   RR KT+G Q G     SPR+ RR
Sbjct: 66  TLREILLLSPSPLRKSRTRLSNRFDM--EAAEAAVTARRSKTKGGQNGLLASPSPRNFRR 125

Query: 124 SRRRSEMEIREEKD-----LCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLD 183
           SR RSE  +  +++     +   E+          GRSKKEK S VP+  +P  S+ +  
Sbjct: 126 SRLRSEAMVDTKENTEPIVVVTDEKKQNXXXXXKLGRSKKEKHSSVPLLASPSPSSDQPQ 185

Query: 184 NDENGNLDRIGQLITDLIMWKDAAKSSLWFGFGSLFFLSSCF-ARGASFSIFSAISQLGL 243
           +   G+L+RI + I+DLIMW+D AKS+LWFGFG + FLS+CF A+G +FS          
Sbjct: 186 DVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSXXXXXXXXXX 245

Query: 244 LLLGLAFVSNSICRRNNVEKKHNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEM 303
                   SN++ R+   E+   + KL EDD+LR+A+ +LP  N AI+K  ELF GE  M
Sbjct: 246 XXXXXXXXSNTL-RQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSELFSGEPAM 305

Query: 304 TLKVAPFLILGAEYGHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAW 363
           TLKVAPF+++GAEYG+LITL RLCA GFF SF++PKLYSCY  Q+N KV+  +RR  EAW
Sbjct: 306 TLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQRRFVEAW 365

Query: 364 KACSHKKVVVGSAATVFWNLSSLKTRIFTAF 370
             C+HKK V GSA T FWNL+SLKTR    F
Sbjct: 366 GVCTHKKFVAGSAVTAFWNLTSLKTRFIAVF 391

[Close]
BLAST of Carg13595 vs. Swiss-Prot
Match: sp|Q56X72|RTNLS_ARATH (Reticulon-like protein B21 OS=Arabidopsis thaliana OX=3702 GN=RTNLB21 PE=2 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 2.7e-36
Identity = 85/242 (35.12%), Postives = 139/242 (57.44%), Query Frame = 0 

Query: 139 KEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQL--ITDLIMWKDAAKSSLWFGFGSLFF 198
           K   S+   P    +ST +    E+       +L  + DL+MW+D ++S+L FGFG+   
Sbjct: 194 KRATSVYSAPPNSTSSTDRFAEQEDNFTHSQSKLQSLVDLVMWRDVSRSTLVFGFGTFLI 253

Query: 199 LSSCFARGASFSIFSAISQLGLLLLGLAFVSNSICRRNNV-EKKHNDFKLKEDDILRMAK 258
           +SS +A   +FS  S ++ +GL+ LGL FV  S+  R  V E++H    ++E+D+ RM +
Sbjct: 254 ISSSYANDLNFSFISVVAYMGLIYLGLMFVLKSLIHRGMVEEERHKVVGVREEDVKRMLR 313

Query: 259 LILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLITLRRLCAIGFFTSFSVPKL 318
           LI+P  N ++ ++R LF G+   TLK+   L + A  G  ITL  L   GF  +F++PK+
Sbjct: 314 LIMPYLNESLHQLRALFSGDPSTTLKMGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKI 373

Query: 319 YSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWNLSSLKTRIFTAFIAVVIV 378
           +  Y    ++  +   RR  +AW++C+HKK V  +  T+ WNLSS+  R++ AF+ +V  
Sbjct: 374 FISYSTHFSAYGNFWMRRFRDAWESCNHKKAVALALFTLVWNLSSVTARVWAAFMLLVAF 433

[Close]
BLAST of Carg13595 vs. TrEMBL
Match: tr|A0A1S3BJV4|A0A1S3BJV4_CUCME (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103490500 PE=4 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 7.4e-180
Identity = 330/394 (83.76%), Postives = 358/394 (90.86%), Query Frame = 0 

Query: 1   MDFTPPSHRSEARSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60
           MD TPPSHRS+ RSR KS+SRLA E D+ PHFSVDAISSP +K+PSPSIQDLL LSPST+
Sbjct: 1   MDLTPPSHRSDPRSRPKSSSRLAFEADQTPHFSVDAISSPRRKTPSPSIQDLLFLSPSTV 60

Query: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQI---GCASPRSVRRSRRRSEMEIREEK 120
            KSRSRLVDRFEMNDEV + A +RRRC+ RGPQ+   GCASPRS+RRSRRRSE+EIREE+
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVEIREER 120

Query: 121 DLCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNSTPKLDNDENGNLDRIGQLITDLI 180
           DLCLAEEFVKARKR+ SGRSKKEKLSLVPVP+TP +STPKLDNDENG+ DRIGQLITDLI
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTPKLDNDENGSFDRIGQLITDLI 180

Query: 181 MWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLLLGLAFVSNSICRRNNVE 240
           MWKDAAKSSLWFG GSLFF S+CF RG SFSIFS ISQLGLL LGLAFVSNSIC+RNNVE
Sbjct: 181 MWKDAAKSSLWFGLGSLFFFSTCFTRGVSFSIFSTISQLGLLFLGLAFVSNSICQRNNVE 240

Query: 241 KKHNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILGAEYGHLIT 300
           KKH DFKLKEDDI  + KL+LPAANFAI KIRELFCGEAEMTLKVAPFLILGAEYGHLIT
Sbjct: 241 KKHKDFKLKEDDIKHLVKLVLPAANFAILKIRELFCGEAEMTLKVAPFLILGAEYGHLIT 300

Query: 301 LRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVGSAATVFWN 360
           LRRLCAIGFF+SFSVPKLYSCYQIQINSKVD VK+ LFEAW+ACSHKKVV+GSAATVFWN
Sbjct: 301 LRRLCAIGFFSSFSVPKLYSCYQIQINSKVDAVKQWLFEAWEACSHKKVVIGSAATVFWN 360

Query: 361 LSSLKTRIFTAFIAVVIVRYCRQFIVLA-PEVVE 391
            SSLKTRIFTAFI +VIVRYCRQFIV + PE+VE
Sbjct: 361 FSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIVE 394

[Close]
BLAST of Carg13595 vs. TrEMBL
Match: tr|A0A0A0KBW7|A0A0A0KBW7_CUCSA (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G157090 PE=4 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 1.7e-168
Identity = 319/402 (79.35%), Postives = 353/402 (87.81%), Query Frame = 0 

Query: 1   MDFTPPSHRSEARSRTKSASRLAIEGDEIPHFSVDAISSPPKKSPSPSIQDLLLLSPSTL 60
           MDFTPPSHRS+ RSRTKS+SRLA+E D+ PHFSVDAISSP +K+PSPSIQD+L LSPST+
Sbjct: 1   MDFTPPSHRSDPRSRTKSSSRLAVEADQTPHFSVDAISSPRRKTPSPSIQDILFLSPSTV 60

Query: 61  RKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQI---GCASPRSVRRSRRRSEMEIREEK 120
            KSRSRLVDRFEMNDEV + A +RRRC+ RGPQ+   GCASPRS+RRSRRRSE+E REE+
Sbjct: 61  GKSRSRLVDRFEMNDEVPEPAVSRRRCRNRGPQLGLMGCASPRSIRRSRRRSEVETREER 120

Query: 121 DLCLAEEFVKARKRRPSGRSKKEKLSLVPVPTTPVNS-TPKLDNDENGNLDRIGQLITDL 180
           DLCLAEEFVKARKR+ SGRSKKEKLSLVPVP+TP +S TPKLDNDENG+LD+IGQLITDL
Sbjct: 121 DLCLAEEFVKARKRKQSGRSKKEKLSLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDL 180

Query: 181 IMWKDAAKSSLWFGFGSLFFLSSCFARGASF-------SIFSAISQLGLLLLGLAFVSNS 240
           IMWKD AKSSLWFG GSLFF S+CF RG SF       SIFSAISQLGLL LGLAFVSNS
Sbjct: 181 IMWKDVAKSSLWFGLGSLFFFSTCFTRGVSFSSNIDNYSIFSAISQLGLLFLGLAFVSNS 240

Query: 241 ICRRNNVEKKHNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFLILG 300
           IC+R N       FKLKEDDI R+ KL+LPAANFAI KIRELFCGEAEMTLKVAPFLILG
Sbjct: 241 ICQRYN-------FKLKEDDIKRLVKLVLPAANFAIFKIRELFCGEAEMTLKVAPFLILG 300

Query: 301 AEYGHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKVVVG 360
           AEYG+LITLRRLCAIGFF+SFSVPKLY+CYQIQINSKVD VK+ +FEAW+ACSHKKVV+G
Sbjct: 301 AEYGYLITLRRLCAIGFFSSFSVPKLYTCYQIQINSKVDAVKQWMFEAWEACSHKKVVIG 360

Query: 361 SAATVFWNLSSLKTRIFTAFIAVVIVRYCRQFIVLA-PEVVE 391
           SAAT FWN SSLKTRIFTAFI +VIVRYCRQFIV + PE+ E
Sbjct: 361 SAATAFWNFSSLKTRIFTAFIVLVIVRYCRQFIVSSEPEIEE 395

[Close]
BLAST of Carg13595 vs. TrEMBL
Match: tr|A0A2I4E639|A0A2I4E639_9ROSI (Reticulon-like protein OS=Juglans regia OX=51240 GN=LOC108986630 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 3.4e-124
Identity = 262/408 (64.22%), Postives = 304/408 (74.51%), Query Frame = 0 

Query: 1   MDFTPPSHRSE-ARSRTKSASRLAIEGD------EIPHFSVD--------------AISS 60
           MD TP SHRSE +R RTK ASRLA  GD      E PH S+D                  
Sbjct: 41  MDSTPSSHRSEPSRLRTKWASRLARIGDLNVETKEPPHLSLDLAXXXXXXXXXXXXXXXX 100

Query: 61  PPKKSPSPSIQDLLLLSPSTLRKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQ---IGC 120
               S S  + +LLLLS S LRKS++RL DR +M +E  +AA +RRRCK+R  Q   +GC
Sbjct: 101 XXXTSNSLPLHELLLLSSSPLRKSKTRLADRLDMAEEQVEAAGSRRRCKSRTAQMGLLGC 160

Query: 121 ASPRSVRRSRRRSEMEIREEKDLCLAEEFVKARKRRPSGRSKKEKLSLVP-VPTTPVNST 180
           ASPR+ RRSRRRSE+EIREEK+L L +E  K RK+R S RSKKEKLSLVP VP++ +  +
Sbjct: 161 ASPRNARRSRRRSEIEIREEKELGLMDEIGKPRKKRHSVRSKKEKLSLVPSVPSSSL--S 220

Query: 181 PKLDNDENGNLDRIGQLITDLIMWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQ 240
           PK  +D+ GNLDRIGQLI DLIMW+D AKSSLWFG G+L FLSSCF  G +FS+FSAISQ
Sbjct: 221 PKTVDDDGGNLDRIGQLINDLIMWRDIAKSSLWFGVGTLCFLSSCFTSGINFSVFSAISQ 280

Query: 241 LGLLLLGLAFVSNSICRRNNVEKKHNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGE 300
           LGLL LG +FVSNSIC+RNN EKKH DFKLKEDDI R+AK+ILPA N AI+K RELF GE
Sbjct: 281 LGLLFLGASFVSNSICQRNNDEKKH-DFKLKEDDIFRLAKMILPATNLAISKTRELFSGE 340

Query: 301 AEMTLKVAPFLILGAEYGHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLF 360
             MTLKVAP L+LGAEYGHLITL RLCAIGFF SFSVPKLYSCY IQIN K + +K  + 
Sbjct: 341 PSMTLKVAPLLVLGAEYGHLITLWRLCAIGFFLSFSVPKLYSCYSIQINQKAEWLKWWVA 400

Query: 361 EAWKACSHKKVVVGSAATVFWNLSSLKTRIFTAFIAVVIVRYCRQFIV 384
           E W ACSHKK+V  SA T FWNLS++KTRIFTAFI++VI+RYCRQ IV
Sbjct: 401 EVWGACSHKKIVAASAITAFWNLSTIKTRIFTAFISLVILRYCRQHIV 445

[Close]
BLAST of Carg13595 vs. TrEMBL
Match: tr|A0A2C9URZ8|A0A2C9URZ8_MANES (Reticulon-like protein OS=Manihot esculenta OX=3983 GN=MANES_13G142900 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.5e-124
Identity = 258/407 (63.39%), Postives = 307/407 (75.43%), Query Frame = 0 

Query: 1   MDFTPPSHRSEARSRTKSASRLA-----IEGDEIPHFSVDAISSPPKKSPSPSI------ 60
           MD TPPSHRS   S++KSASRLA     I+ +E PH S+D + SP KK+PS S+      
Sbjct: 1   MDTTPPSHRSNPNSQSKSASRLARITSSIDNEEPPHLSLDLMPSPAKKTPSTSLALSLRS 60

Query: 61  -------QDLLLLSPSTLRKSRSRLVDRFEMNDEVT-DAAAARRRCKTRGPQ---IGCAS 120
                  +DLLLLSPS  RKSRSRL DR E+ +E   +   +RRRCK+R  Q   +GCAS
Sbjct: 61  STNSLPFRDLLLLSPSP-RKSRSRLADRIEVTEEAAMEPTGSRRRCKSRAAQLGALGCAS 120

Query: 121 PRSVRRSRRRSEMEIREEKDLC-LAEEFVKARKRRPSGRSKKEKLSLVP-VPTTPVNSTP 180
           PR  RRSRRRSEME REEKDL  L EE  K RKRR SGRSKKEKLSLVP +P++  N +P
Sbjct: 121 PRHSRRSRRRSEMESREEKDLIGLGEEIGKVRKRRHSGRSKKEKLSLVPSLPSS--NPSP 180

Query: 181 KLDNDENGNLDRIGQLITDLIMWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQL 240
           ++++ + GNLD+IG +I DLIMWKD AKSSLWFG G L FLSSCFA+G SFSIFSAISQL
Sbjct: 181 EVEDGDGGNLDKIGMIIYDLIMWKDVAKSSLWFGLGCLCFLSSCFAKGISFSIFSAISQL 240

Query: 241 GLLLLGLAFVSNSICRRNNVEKKHNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEA 300
           GLL LG +F+SNSIC RNN+EK+ N FKLKE+DIL++ +LILP AN AI+K RELF GE 
Sbjct: 241 GLLFLGASFISNSICPRNNMEKRCN-FKLKEEDILKLGRLILPPANLAISKTRELFSGEP 300

Query: 301 EMTLKVAPFLILGAEYGHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFE 360
            MTLKV PFL+LGAEYGHL+TL RLCAIGFF  F++PKLYS Y  QI+ KVD  K R+ E
Sbjct: 301 SMTLKVIPFLLLGAEYGHLVTLWRLCAIGFFIGFTMPKLYSRYSNQIDQKVDFTKCRVME 360

Query: 361 AWKACSHKKVVVGSAATVFWNLSSLKTRIFTAFIAVVIVRYCRQFIV 384
           AW+ACSHKK+V  SA T FWN+SS+KTRIF AFI +VI+R CRQ +V
Sbjct: 361 AWEACSHKKIVAASAVTAFWNMSSVKTRIFAAFIFLVILRCCRQNLV 403

[Close]
BLAST of Carg13595 vs. TrEMBL
Match: tr|F6H5G3|F6H5G3_VITVI (Reticulon-like protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03190 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.7e-121
Identity = 246/394 (62.44%), Postives = 304/394 (77.16%), Query Frame = 0 

Query: 1   MDFTPPSHRSEARSRTKSASRLAIEGD------EIPHFSVDAISSPPKKSPSPS----IQ 60
           MD  P SH+SE RS TKSASR A  G+      E P  S+D  +  P K+ SPS    + 
Sbjct: 1   MDSPPLSHQSEPRSGTKSASRPARIGEIDQGGQERPKISLDLSTLSPSKTLSPSNPLPLH 60

Query: 61  DLLLLSPSTLRKSRSRLVDRFEMNDEVTDAAAARRRCKTRGPQ---IGCASPRSVRRSRR 120
           +LLLLSPS LR+SR+RL +R +M +E  +A  +RRRCK+R  Q   +GCASPR+ RR RR
Sbjct: 61  ELLLLSPSPLRRSRTRLTERIDMGEEPLEATGSRRRCKSRISQMGVLGCASPRNTRRPRR 120

Query: 121 RSEMEIREEKDLCLAEEFVKARKRRPSGRSKKEKLSLVP-VPTTPVNSTPKLDNDENGNL 180
           R E ++RE+KD  +AEE  K RKRR SGRS+KEKLSLVP VP++  +S+PK + D+  NL
Sbjct: 121 RVEQDVREDKDFGMAEEMGKLRKRRHSGRSRKEKLSLVPSVPSS--SSSPKANEDDLSNL 180

Query: 181 DRIGQLITDLIMWKDAAKSSLWFGFGSLFFLSSCFARGASFSIFSAISQLGLLLLGLAFV 240
            RIGQL+TDLIMWKDA+KSS WFGFGS+ FLSSCF RG SFSIFSAISQLGLL LGL+F 
Sbjct: 181 HRIGQLVTDLIMWKDASKSSFWFGFGSVCFLSSCFTRGISFSIFSAISQLGLLFLGLSFF 240

Query: 241 SNSICRRNNVEKKHNDFKLKEDDILRMAKLILPAANFAIAKIRELFCGEAEMTLKVAPFL 300
           SNS+ +R+NVEK+  +FKLKEDDILR+A+ ILPA N AI+K  +LF GE  MTLKVAPF 
Sbjct: 241 SNSLYQRDNVEKR-REFKLKEDDILRVARAILPATNLAISKTIQLFSGEPSMTLKVAPFF 300

Query: 301 ILGAEYGHLITLRRLCAIGFFTSFSVPKLYSCYQIQINSKVDVVKRRLFEAWKACSHKKV 360
           ++GAEYGHL+T+RRLCA+GFF SF++PKLYSCY  QIN++V+ +K  + EAW ACSHKK+
Sbjct: 301 LVGAEYGHLLTVRRLCALGFFISFTIPKLYSCYSAQINTRVEYLKGWVVEAWGACSHKKI 360

Query: 361 VVGSAATVFWNLSSLKTRIFTAFIAVVIVRYCRQ 381
           V  SA TVFWNLS++KTRIF AFIA+VI+RY RQ
Sbjct: 361 VAASAVTVFWNLSAIKTRIFAAFIALVILRYHRQ 391

The following BLAST results are available for this feature:
BLAST of Carg13595 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022947074.16.1e-21098.72reticulon-like protein B17 [Cucurbita moschata][more]
XP_023533892.19.7e-20897.70reticulon-like protein B17 [Cucurbita pepo subsp. pepo][more]
XP_022971163.12.2e-20798.20reticulon-like protein B17 [Cucurbita maxima][more]
XP_008448255.11.1e-17983.76PREDICTED: reticulon-like protein B17 [Cucumis melo][more]
XP_022149569.11.9e-17985.50reticulon-like protein B17 [Momordica charantia][more]
BLAST of Carg13595 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G20590.12.2e-9754.02Reticulon family protein[more]
AT4G28430.12.2e-7646.04Reticulon family protein[more]
AT5G58000.11.5e-3735.12Reticulon family protein[more]
BLAST of Carg13595 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6DR04|RTNLQ_ARATH4.0e-9654.02Reticulon-like protein B17 OS=Arabidopsis thaliana OX=3702 GN=RTNLB17 PE=2 SV=1[more]
sp|Q8LDS3|RTNLR_ARATH3.9e-7546.04Reticulon-like protein B18 OS=Arabidopsis thaliana OX=3702 GN=RTNLB18 PE=2 SV=2[more]
sp|Q56X72|RTNLS_ARATH2.7e-3635.12Reticulon-like protein B21 OS=Arabidopsis thaliana OX=3702 GN=RTNLB21 PE=2 SV=2[more]
BLAST of Carg13595 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BJV4|A0A1S3BJV4_CUCME7.4e-18083.76Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103490500 PE=4 SV=1[more]
tr|A0A0A0KBW7|A0A0A0KBW7_CUCSA1.7e-16879.35Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G157090 PE=4 SV=1[more]
tr|A0A2I4E639|A0A2I4E639_9ROSI3.4e-12464.22Reticulon-like protein OS=Juglans regia OX=51240 GN=LOC108986630 PE=4 SV=1[more]
tr|A0A2C9URZ8|A0A2C9URZ8_MANES7.5e-12463.39Reticulon-like protein OS=Manihot esculenta OX=3983 GN=MANES_13G142900 PE=4 SV=1[more]
tr|F6H5G3|F6H5G3_VITVI2.7e-12162.44Reticulon-like protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03190 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003388Reticulon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg13595-RACarg13595-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 391..411
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..161
NoneNo IPR availablePANTHERPTHR10994RETICULONcoord: 21..407
NoneNo IPR availablePANTHERPTHR10994:SF123RETICULON-LIKE PROTEIN B17-RELATEDcoord: 21..407
IPR003388ReticulonPFAMPF02453Reticuloncoord: 174..328
e-value: 2.7E-32
score: 111.8
IPR003388ReticulonPROSITEPS50845RETICULONcoord: 173..334
score: 14.296

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg13595Cla013533Watermelon (97103) v1carwmB0034
Carg13595Csa6G157090Cucumber (Chinese Long) v2carcuB0026
Carg13595MELO3C013582Melon (DHL92) v3.5.1carmeB0031
Carg13595ClCG02G017910Watermelon (Charleston Gray)carwcgB0033
Carg13595CSPI06G12820Wild cucumber (PI 183967)carcpiB0027
Carg13595Cucsa.384850Cucumber (Gy14) v1carcgyB0037
Carg13595CmaCh02G000890Cucurbita maxima (Rimu)carcmaB0042
Carg13595CmoCh02G000890Cucurbita moschata (Rifu)carcmoB0044
Carg13595Lsi10G016010Bottle gourd (USVL1VR-Ls)carlsiB027
Carg13595Cp4.1LG16g07750Cucurbita pepo (Zucchini)carcpeB0044
Carg13595Cp4.1LG05g15070Cucurbita pepo (Zucchini)carcpeB0048
Carg13595CsGy6G012910Cucumber (Gy14) v2carcgybB0026
Carg13595MELO3C013582.2Melon (DHL92) v3.6.1carmedB0031
Carg13595CsaV3_6G015270Cucumber (Chinese Long) v3carcucB0027
Carg13595Cla97C02G043690Watermelon (97103) v2carwmbB0028
Carg13595Bhi10G000842Wax gourdcarwgoB0036
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg13595Silver-seed gourdcarcarB032
Carg13595Silver-seed gourdcarcarB035
Carg13595Cucumber (Gy14) v2carcgybB0032
Carg13595Cucurbita maxima (Rimu)carcmaB0037
Carg13595Cucurbita maxima (Rimu)carcmaB0040
Carg13595Cucurbita moschata (Rifu)carcmoB0042
Carg13595Cucurbita moschata (Rifu)carcmoB0037
Carg13595Cucurbita pepo (Zucchini)carcpeB0047
Carg13595Wild cucumber (PI 183967)carcpiB0034
Carg13595Cucumber (Chinese Long) v2carcuB0032
Carg13595Melon (DHL92) v3.5.1carmeB0033
Carg13595Melon (DHL92) v3.6.1carmedB0034
Carg13595Watermelon (Charleston Gray)carwcgB0029
Carg13595Watermelon (97103) v1carwmB0030
Carg13595Watermelon (97103) v2carwmbB0024