Cla005093 (gene) Watermelon (97103) v1

Overview
NameCla005093
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionMYB transcription factor (AHRD V1 *-** Q9T066_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factor
LocationChr3 : 3060617 .. 3062192 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGATCTCCTTGTTGTGATAAGAGTATTGTGAAGAAGGGTCCTTGGTCTCCTGAAGAAGATGCTAAGCTCAAAGATTATATTGACAAGAATGGCACTGGTGGGAATTGGATCTCTCTCCCTCAAAAAGCTGGTAAAATATTATTACTCAAAAATTTCCCCATTTTTTTAGGGTTTTTTTCTTTTCTTTTCAAATGGGGTTTTAGGGTTTTTTCCCCTTCAAATGGGTTTTTAGGGTTTTGAATTGTTCTTTCTCTAAGTAGGGTTTTGAGTACATTTGTTTTCTCTTTGTAAAATGGGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATTTGGTGTGAATATTTTTGGAAGGTTTGAAGAGATGTGGGAAGAGTTGTAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGAAGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACCATTGGAAGCAGGTACTTTCATTTATATAATCTTAATTATTATTTTATTAATTAATCAAACTCACATGGCCTTTTAACCCCTTTATTTAGATTTAATTTATTCTTCTTTGCATGCATTTCTTCATTATCCTTATGTTAACAGTATGTGTGTATAATAATTTCTCAAAAAAAAAAAAAAAAAAAAAAGGAAGAAGAAGAAGTGTATAAACATTTAAATTTACCCTAAACTAGCTTGTAACCATTAGTATTTAACAATAATATTAGAGCAAAGTATAACTTATATACAGTATGCATTTGATCGAACTTGTGGATTAATATTTAAGCTCACGAGTGATAGATTGAGTACCTATAAAACAAAACCTTTTTAGGGTTTTTTTTTTTCCTTTCTTCTTCTTATGGATCTAGGTCAAGAATTTACAGGTGGTCGATAATCGCGACACAATTACCAGGAAGAACAGACAACGACATCAAGAATCATTGGAACAGCAAACTAAAGAGGAAGCTTATAGGAATGGAGAAGAAAGGCCAAATGACCACCAACACCACCACCATGACCATACCATCTTCTCATAATCATCATCAACAAGTTTTTTCATCATTTTCATCTCAACCACTCTCATCCCTAATTTACAAAGATGAATTCAATGATATTAATTATTACAACAACAGCTTTTCCCCTCCTTCAACAACAGCAATCAGAAACTTTGAAACTCTCATTTCATCAATCCCATCAAATTGGTCAAACTTCCAAATTACAAACAACATTAGCCCTTGTCTTGTCCAAACACAAGAAACCAACAACTTATTGAGTAATTCTTTGATGTATAATCATTATCATCAAAATCCATTAGTACAAATGAAAGAAAGCTGCTTATTAGGGTTTGGAAGTGAAGCCAGTTGCAGTTCAAGTACTTCTGATGGAAGCTACACTCAAATCAACAACACTTCAGGAATAATGGGGTTTCAGAATATTAACCCTAATTACTATTATTCTGATAGTGTTATGAATCATCAACCAGCTGCTAATCTTGAGTCTTACATGGAGGATGAAAACAAGACATTACTAGAAAATTTTATGTACTTTTACTGA

mRNA sequence

ATGGGAAGATCTCCTTGTTGTGATAAGAGTATTGTGAAGAAGGGTCCTTGGTCTCCTGAAGAAGATGCTAAGCTCAAAGATTATATTGACAAGAATGGCACTGGTGGGAATTGGATCTCTCTCCCTCAAAAAGCTGGTTTGAAGAGATGTGGGAAGAGTTGTAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGAAGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACCATTGGAAGCAGGTCAAGAATTTACAGGTGGTCGATAATCGCGACACAATTACCAGGAAGAACAGACAACGACATCAAGAATCATTGGAACAGCAAACTAAAGAGGAAGCTTATAGGAATGGAGAAGAAAGGCCAAATGACCACCAACACCACCACCATGACCATACCATCTTCTCATAATCATCATCAACAAGTTTTTTCATCATTTTCATCTCAACCACTCTCATCCCTAATTTACAAAGATGAATTCAATGATATTAATTATTACAACAACAGCTTTTCCCCTCCTTCAACAACAGCAATCAGAAACTTTGAAACTCTCATTTCATCAATCCCATCAAATTGGTCAAACTTCCAAATTACAAACAACATTAGCCCTTGTCTTGTCCAAACACAAGAAACCAACAACTTATTGAGTAATTCTTTGATGTATAATCATTATCATCAAAATCCATTAGTACAAATGAAAGAAAGCTGCTTATTAGGGTTTGGAAGTGAAGCCAGTTGCAGTTCAAGTACTTCTGATGGAAGCTACACTCAAATCAACAACACTTCAGGAATAATGGGGTTTCAGAATATTAACCCTAATTACTATTATTCTGATAGTGTTATGAATCATCAACCAGCTGCTAATCTTGAGTCTTACATGGAGGATGAAAACAAGACATTACTAGAAAATTTTATGTACTTTTACTGA

Coding sequence (CDS)

ATGGGAAGATCTCCTTGTTGTGATAAGAGTATTGTGAAGAAGGGTCCTTGGTCTCCTGAAGAAGATGCTAAGCTCAAAGATTATATTGACAAGAATGGCACTGGTGGGAATTGGATCTCTCTCCCTCAAAAAGCTGGTTTGAAGAGATGTGGGAAGAGTTGTAGGTTGAGATGGCTTAACTATTTGAGGCCTAACATTAAACATGGAGGATTCACTGAAGAGGAAGATAGAATAATTTGTACTCTTTTTTCCACCATTGGAAGCAGGTCAAGAATTTACAGGTGGTCGATAATCGCGACACAATTACCAGGAAGAACAGACAACGACATCAAGAATCATTGGAACAGCAAACTAAAGAGGAAGCTTATAGGAATGGAGAAGAAAGGCCAAATGACCACCAACACCACCACCATGACCATACCATCTTCTCATAATCATCATCAACAAGTTTTTTCATCATTTTCATCTCAACCACTCTCATCCCTAATTTACAAAGATGAATTCAATGATATTAATTATTACAACAACAGCTTTTCCCCTCCTTCAACAACAGCAATCAGAAACTTTGAAACTCTCATTTCATCAATCCCATCAAATTGGTCAAACTTCCAAATTACAAACAACATTAGCCCTTGTCTTGTCCAAACACAAGAAACCAACAACTTATTGAGTAATTCTTTGATGTATAATCATTATCATCAAAATCCATTAGTACAAATGAAAGAAAGCTGCTTATTAGGGTTTGGAAGTGAAGCCAGTTGCAGTTCAAGTACTTCTGATGGAAGCTACACTCAAATCAACAACACTTCAGGAATAATGGGGTTTCAGAATATTAACCCTAATTACTATTATTCTGATAGTGTTATGAATCATCAACCAGCTGCTAATCTTGAGTCTTACATGGAGGATGAAAACAAGACATTACTAGAAAATTTTATGTACTTTTACTGA

Protein sequence

MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKRKLIGMEKKGQMTTNTTTMTIPSSHNHHQQVFSSFSSQPLSSLIYKDEFNDINYYNNSFSPPSTTAIRNFETLISSIPSNWSNFQITNNISPCLVQTQETNNLLSNSLMYNHYHQNPLVQMKESCLLGFGSEASCSSSTSDGSYTQINNTSGIMGFQNINPNYYYSDSVMNHQPAANLESYMEDENKTLLENFMYFY
Homology
[Close]
BLAST of Cla005093 vs. Swiss-Prot
Match: MYB36_ARATH (Transcription factor MYB36 OS=Arabidopsis thaliana GN=MYB36 PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.9e-58
Identity = 112/182 (61.54%), Postives = 136/182 (74.73%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+ VKKGPWSPEED KLKDYIDK GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNIKHGGF+EEEDRII +L+ +IGS     RWSIIA QLPGRTDNDIKN+WN+KLK+
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGS-----RWSIIAAQLPGRTDNDIKNYWNTKLKK 120

Query: 121 KLIGMEKKGQMTTNTTTMTIPS-SHNHHQQVFSSFSSQPLSSLIYKDEFNDI-----NYY 177
           KL+G +K+     + T  T  + S+N++ +   + S+  L  L    +  ++     ++Y
Sbjct: 121 KLLGRQKQMNRQDSITDSTENNLSNNNNNKSPQNLSNSALERLQLHMQLQNLQSPFSSFY 177

[Close]
BLAST of Cla005093 vs. Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.3e-56
Identity = 103/151 (68.21%), Postives = 118/151 (78.15%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+ VKKGPWSPEEDAKLK YI+ +GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNIKHGGF+EEE+ IIC+L+ TIGS     RWSIIA QLPGRTDNDIKN+WN++LK+
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGS-----RWSIIAAQLPGRTDNDIKNYWNTRLKK 120

Query: 121 KLIGMEKK--GQMTTNTTTMTIPSSHNHHQQ 150
           KLI  ++K   +       M +     H QQ
Sbjct: 121 KLINKQRKELQEACMEQQEMMVMMKRQHQQQ 146

[Close]
BLAST of Cla005093 vs. Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.1e-55
Identity = 131/311 (42.12%), Postives = 172/311 (55.31%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+ VK+GPWSPEEDAKLKDYI+K GTGGNWI+LP KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNI+HG FTEEED II +LF++IGS     RWS+IA  L GRTDNDIKN+WN+KLK+
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGS-----RWSVIAAHLQGRTDNDIKNYWNTKLKK 120

Query: 121 KLIGMEKKGQMTTNTTTMTIPSSHNHHQQVFSSFSSQPLSSLIYKDEFNDINYYNNSFSP 180
           KLI             TM  P   +HH  + +S SS   SS  + +  N +  YN S + 
Sbjct: 121 KLI------------ATMAPPP--HHHLAIATSSSSASPSSSSHYNMINSLLPYNPSTNQ 180

Query: 181 PSTTAIRNFETLISSIPSNWSNFQITNNISPCLVQTQETNNLLSNSLMYNHYHQNPLVQM 240
             T       T++      +    + N     LV +   NNL+      +H   N     
Sbjct: 181 LLTPHQGIMMTMMGQQQQLFYQEDMGN-----LVNSPNRNNLI-----MSHQEDNQEQST 240

Query: 241 KESCLLGFGSEASCSSSTSDGSYTQINNTSGIMGFQNINPNYYYSDSVMNHQPAANLESY 300
            +  +L         S    GS T    T   M  ++ + ++++ +       +  +E Y
Sbjct: 241 NKGIML--------LSDVRSGSSTTSTVTRVKMEHRDHDDHHHHHEEDERSMTSVVMEDY 274

Query: 301 MEDENKTLLEN 312
             +E K L+ +
Sbjct: 301 GMEEIKQLISS 274

[Close]
BLAST of Cla005093 vs. Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.0e-53
Identity = 118/237 (49.79%), Postives = 147/237 (62.03%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+ VK+GPWSPEED+KL+DYI+K G GGNWIS P KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNIKHG F+EEEDRII +LF+ IGS     RWSIIA  LPGRTDNDIKN+WN+KL++
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGS-----RWSIIAAHLPGRTDNDIKNYWNTKLRK 120

Query: 121 KLIGMEKKGQMTTNTTTMTIPSSHNHHQQVFSSFSSQPLSSLIYKDEFNDINYYNNSFSP 180
           KL+         ++++ M  P  +   Q V    S   + S  Y     + N Y      
Sbjct: 121 KLL----SSSSDSSSSAMASPYLNPISQDVKRPTSPTTIPSSSYNPYAENPNQYPT---- 180

Query: 181 PSTTAIRNFETLISSIPS-NWSNFQITNNISPCLVQ---TQETNNLLSNS--LMYNH 232
                    ++LISSI      + QI + I+P   Q     ++NN  SN+   + NH
Sbjct: 181 ---------KSLISSINGFEAGDKQIISYINPNYPQDLYLSDSNNNTSNANGFLLNH 215

[Close]
BLAST of Cla005093 vs. Swiss-Prot
Match: MYB80_ARATH (Transcription factor MYB80 OS=Arabidopsis thaliana GN=MYB80 PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.4e-42
Identity = 91/189 (48.15%), Postives = 118/189 (62.43%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR PCC+K  VK+G W+PEED KL  YI ++GT  NW  +P+ AGL+RCGKSCRLRW N
Sbjct: 1   MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTR-NWRLIPKNAGLQRCGKSCRLRWTN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRP++KHG F+E E+ II    S +G+     RWS+IA QLPGRTDND+KN+WN+KLK+
Sbjct: 61  YLRPDLKHGQFSEAEEHIIVKFHSVLGN-----RWSLIAAQLPGRTDNDVKNYWNTKLKK 120

Query: 121 KLIGM--------EKKGQMTTNTTTMTIPSSHNHHQQVFSSFSSQPLSSLIYKD-EFNDI 180
           KL GM             M   TTT+  P   +  +     F  + L  L  K  + N I
Sbjct: 121 KLSGMGIDPVTHKPFSHLMAEITTTLNPPQVSHLAEAALGCFKDEMLHLLTKKRVDLNQI 180

[Close]
BLAST of Cla005093 vs. TrEMBL
Match: A0A0A0LUZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G109320 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 1.7e-138
Identity = 267/329 (81.16%), Postives = 280/329 (85.11%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGRSPCCDKS VKKGPWSPEEDAKLKD+IDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNIKHGGFT+EEDRIICTLFSTIGS     RWSIIATQLPGRTDNDIKNHWNSKLKR
Sbjct: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGS-----RWSIIATQLPGRTDNDIKNHWNSKLKR 120

Query: 121 KLIGMEKKGQMTTNTTTMTIPSSHN-HHQQVFSSFSSQPLSSLIYK--DEFNDINYYNNS 180
           KLI MEKK Q+   TT+ TIPSSHN HH Q+FSSFSSQPLSSLI K  D FNDINY N +
Sbjct: 121 KLIEMEKKAQI---TTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYN 180

Query: 181 FSPPSTTAIRNFETLISSIPSNWSNFQITNNISPCLVQTQETNNLL-SNSLMYNHYHQNP 240
            S P TT I++FE+LISSIPSNWSN     + SPCLVQTQET NLL SNSLMYNH+  NP
Sbjct: 181 LSSPPTT-IKSFESLISSIPSNWSNNNNNISPSPCLVQTQETTNLLSSNSLMYNHH--NP 240

Query: 241 LVQMKESCLLGFGSEASCSSSTSDG-SYTQINNTSGIMGFQNINPN------YYYSDSVM 300
           LVQMKESCLLGFGSE SCSSSTSDG SYTQIN TSGIMGFQN N N      YYYSD++M
Sbjct: 241 LVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGIMGFQNNNNNNNPNYYYYYSDNIM 300

Query: 301 ---NHQPAANLE-SYMEDENKTLLENFMY 315
              NHQPAANLE SYMEDENKTLLENFMY
Sbjct: 301 NYINHQPAANLEYSYMEDENKTLLENFMY 318

[Close]
BLAST of Cla005093 vs. TrEMBL
Match: V4UEI6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028804mg PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.0e-67
Identity = 146/267 (54.68%), Postives = 178/267 (66.67%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+ VKKGPWSPEED+KLK+YI+K GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNIKHG FT+EEDR+IC+LF++IGS     RWSIIA QLPGRTDNDIKN+WN+KLK+
Sbjct: 61  YLRPNIKHGEFTDEEDRLICSLFASIGS-----RWSIIAAQLPGRTDNDIKNYWNTKLKK 120

Query: 121 KLIGMEKK-GQMTTNTTTMTIPSSHNHHQQVFSSFSSQPLSSLIYKDEFNDINYYNNSFS 180
           KL+ M         +T    IPSSH+HHQ + S   SQP              YY  S  
Sbjct: 121 KLMAMAPPLSSQKKSTAPPLIPSSHHHHQALVSLLPSQP--------------YYTPSNK 180

Query: 181 PPSTTAIRNFETLISSIPSNWSNFQITNNISPCLVQTQETNNLLSNSLMYNHYHQNPLVQ 240
              + +  +FE + S+ P +  +    NN    L+Q QE     +N+ M  +Y       
Sbjct: 181 SLISNSFDSFEPISSNTPLHLFD---NNN----LIQIQENQLFSNNNSMQGYY------P 232

Query: 241 MKESCLLGFGSEASCSSSTSDGSYTQI 267
           MK++  L FGSE SCSS  SDGS +QI
Sbjct: 241 MKDN-FLTFGSEQSCSS--SDGSCSQI 232

[Close]
BLAST of Cla005093 vs. TrEMBL
Match: A0A067FAN8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019787mg PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.0e-67
Identity = 146/267 (54.68%), Postives = 178/267 (66.67%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+ VKKGPWSPEED+KLK+YI+K GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNIKHG FT+EEDR+IC+LF++IGS     RWSIIA QLPGRTDNDIKN+WN+KLK+
Sbjct: 61  YLRPNIKHGEFTDEEDRLICSLFASIGS-----RWSIIAAQLPGRTDNDIKNYWNTKLKK 120

Query: 121 KLIGMEKK-GQMTTNTTTMTIPSSHNHHQQVFSSFSSQPLSSLIYKDEFNDINYYNNSFS 180
           KL+ M         +T    IPSSH+HHQ + S   SQP              YY  S  
Sbjct: 121 KLMAMAPPLSSQKKSTAPPLIPSSHHHHQALVSLLPSQP--------------YYTPSNK 180

Query: 181 PPSTTAIRNFETLISSIPSNWSNFQITNNISPCLVQTQETNNLLSNSLMYNHYHQNPLVQ 240
              + +  +FE + S+ P +  +    NN    L+Q QE     +N+ M  +Y       
Sbjct: 181 SLISNSFDSFEPISSNTPLHLFD---NNN----LIQIQENQLFSNNNSMQGYY------P 232

Query: 241 MKESCLLGFGSEASCSSSTSDGSYTQI 267
           MK++  L FGSE SCSS  SDGS +QI
Sbjct: 241 MKDN-FLTFGSEQSCSS--SDGSCSQI 232

[Close]
BLAST of Cla005093 vs. TrEMBL
Match: I1M4H4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G322900 PE=4 SV=2)

HSP 1 Score: 263.5 bits (672), Expect = 3.4e-67
Identity = 153/307 (49.84%), Postives = 198/307 (64.50%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+ VK+GPWSPEED+KLKDYI+K+GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDSKLKDYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNIKHG F++EEDRIIC+L++ IGS     RWSIIATQLPGRTDNDIKN+WN+KLKR
Sbjct: 61  YLRPNIKHGEFSDEEDRIICSLYANIGS-----RWSIIATQLPGRTDNDIKNYWNTKLKR 120

Query: 121 KLIGMEKKGQMTTNTTTMTIPSSHNH-------HQQVFSSF----SSQPLSSLIYKDEFN 180
           KL+G+              +P+SH           Q  SSF     S  LSS IY D +N
Sbjct: 121 KLMGL--------------LPASHQRIAPFQQSSPQNLSSFPSHSHSSSLSSSIYSDYYN 180

Query: 181 DINYYNNSFSPPSTTAIRNFETLISSIP-SNWSNFQITNNISPCLVQTQETNNLLSNSLM 240
             +  N+ + P  T++    E +  S+P SN++N    + ++P   Q QE    + + + 
Sbjct: 181 --HNSNHYYMPAPTSSFTCLEPI--SVPSSNYTNTTTASTLNP-FYQNQEPLASIISPMQ 240

Query: 241 YNHYHQNPLVQMKESCLLGFGSEASCSSSTSDGSYTQINNTSGI----MGFQNINPNYYY 292
           Y          +K+S +L FGSE SCSS  SDGS +Q++    +    MGFQN     + 
Sbjct: 241 Y--------YPIKDSSMLVFGSETSCSS--SDGSCSQVSLGREVKQEDMGFQNFMFGDHQ 273

[Close]
BLAST of Cla005093 vs. TrEMBL
Match: A0A0B2QP46_GLYSO (Transcription factor RAX3 OS=Glycine soja GN=glysoja_021072 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.4e-67
Identity = 153/307 (49.84%), Postives = 198/307 (64.50%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+ VK+GPWSPEED+KLKDYI+K+GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDSKLKDYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNIKHG F++EEDRIIC+L++ IGS     RWSIIATQLPGRTDNDIKN+WN+KLKR
Sbjct: 61  YLRPNIKHGEFSDEEDRIICSLYANIGS-----RWSIIATQLPGRTDNDIKNYWNTKLKR 120

Query: 121 KLIGMEKKGQMTTNTTTMTIPSSHNH-------HQQVFSSF----SSQPLSSLIYKDEFN 180
           KL+G+              +P+SH           Q  SSF     S  LSS IY D +N
Sbjct: 121 KLMGL--------------LPASHQRIAPFQQSSPQNLSSFPSHSHSSSLSSSIYSDYYN 180

Query: 181 DINYYNNSFSPPSTTAIRNFETLISSIP-SNWSNFQITNNISPCLVQTQETNNLLSNSLM 240
             +  N+ + P  T++    E +  S+P SN++N    + ++P   Q QE    + + + 
Sbjct: 181 --HNSNHYYMPAPTSSFTCLEPI--SVPSSNYTNTTTASTLNP-FYQNQEPLASIISPMQ 240

Query: 241 YNHYHQNPLVQMKESCLLGFGSEASCSSSTSDGSYTQINNTSGI----MGFQNINPNYYY 292
           Y          +K+S +L FGSE SCSS  SDGS +Q++    +    MGFQN     + 
Sbjct: 241 Y--------YPIKDSSMLVFGSETSCSS--SDGSCSQVSLGREVKQEDMGFQNFMFGDHQ 273

[Close]
BLAST of Cla005093 vs. NCBI nr
Match: gi|700209713|gb|KGN64809.1| (hypothetical protein Csa_1G109320 [Cucumis sativus])

HSP 1 Score: 500.4 bits (1287), Expect = 2.4e-138
Identity = 267/329 (81.16%), Postives = 280/329 (85.11%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGRSPCCDKS VKKGPWSPEEDAKLKD+IDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNIKHGGFT+EEDRIICTLFSTIGS     RWSIIATQLPGRTDNDIKNHWNSKLKR
Sbjct: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGS-----RWSIIATQLPGRTDNDIKNHWNSKLKR 120

Query: 121 KLIGMEKKGQMTTNTTTMTIPSSHN-HHQQVFSSFSSQPLSSLIYK--DEFNDINYYNNS 180
           KLI MEKK Q+   TT+ TIPSSHN HH Q+FSSFSSQPLSSLI K  D FNDINY N +
Sbjct: 121 KLIEMEKKAQI---TTSRTIPSSHNHHHHQIFSSFSSQPLSSLINKHDDYFNDINYSNYN 180

Query: 181 FSPPSTTAIRNFETLISSIPSNWSNFQITNNISPCLVQTQETNNLL-SNSLMYNHYHQNP 240
            S P TT I++FE+LISSIPSNWSN     + SPCLVQTQET NLL SNSLMYNH+  NP
Sbjct: 181 LSSPPTT-IKSFESLISSIPSNWSNNNNNISPSPCLVQTQETTNLLSSNSLMYNHH--NP 240

Query: 241 LVQMKESCLLGFGSEASCSSSTSDG-SYTQINNTSGIMGFQNINPN------YYYSDSVM 300
           LVQMKESCLLGFGSE SCSSSTSDG SYTQIN TSGIMGFQN N N      YYYSD++M
Sbjct: 241 LVQMKESCLLGFGSEGSCSSSTSDGRSYTQINTTSGIMGFQNNNNNNNPNYYYYYSDNIM 300

Query: 301 ---NHQPAANLE-SYMEDENKTLLENFMY 315
              NHQPAANLE SYMEDENKTLLENFMY
Sbjct: 301 NYINHQPAANLEYSYMEDENKTLLENFMY 318

[Close]
BLAST of Cla005093 vs. NCBI nr
Match: gi|659072274|ref|XP_008464692.1| (PREDICTED: transcription factor RAX2-like [Cucumis melo])

HSP 1 Score: 414.5 bits (1064), Expect = 1.7e-112
Identity = 216/263 (82.13%), Postives = 226/263 (85.93%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGRSPCCDKS VKKGPWSPEEDAKLKD+IDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRSPCCDKSNVKKGPWSPEEDAKLKDFIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNIKHGGFT+EEDRIICTLFSTIGS     RWSIIATQLPGRTDNDIKNHWNSKLKR
Sbjct: 61  YLRPNIKHGGFTDEEDRIICTLFSTIGS-----RWSIIATQLPGRTDNDIKNHWNSKLKR 120

Query: 121 KLIGMEKKGQMTTNTTTMTIPSS--HNHHQQVFSSFSSQPLSSLIYK--DEFNDINYYN- 180
           KLI MEKK Q+TT     TIPSS  H+HH Q FSSFSSQPLSSLI K  D FNDINY N 
Sbjct: 121 KLIEMEKKAQITT-----TIPSSQNHHHHHQTFSSFSSQPLSSLINKHDDYFNDINYSNY 180

Query: 181 NSFSPPSTTAIRNFETLISSIPSNWSNFQITNNISPCLVQTQETNNLL-SNSLMYNHYHQ 240
           N  SPPSTT I++FE+LISSIPSNWSN     + SPCLVQTQET NLL SNSLMYNH+  
Sbjct: 181 NLSSPPSTTTIKSFESLISSIPSNWSNNNNNISHSPCLVQTQETTNLLSSNSLMYNHH-- 240

Query: 241 NPLVQMKESCLLGFGSEASCSSS 258
           NPLVQMKESCLLGFGSE SCSS+
Sbjct: 241 NPLVQMKESCLLGFGSEGSCSST 251

[Close]
BLAST of Cla005093 vs. NCBI nr
Match: gi|567863640|ref|XP_006424474.1| (hypothetical protein CICLE_v10028804mg [Citrus clementina])

HSP 1 Score: 264.2 bits (674), Expect = 2.9e-67
Identity = 146/267 (54.68%), Postives = 178/267 (66.67%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+ VKKGPWSPEED+KLK+YI+K GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKYGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNIKHG FT+EEDR+IC+LF++IGS     RWSIIA QLPGRTDNDIKN+WN+KLK+
Sbjct: 61  YLRPNIKHGEFTDEEDRLICSLFASIGS-----RWSIIAAQLPGRTDNDIKNYWNTKLKK 120

Query: 121 KLIGMEKK-GQMTTNTTTMTIPSSHNHHQQVFSSFSSQPLSSLIYKDEFNDINYYNNSFS 180
           KL+ M         +T    IPSSH+HHQ + S   SQP              YY  S  
Sbjct: 121 KLMAMAPPLSSQKKSTAPPLIPSSHHHHQALVSLLPSQP--------------YYTPSNK 180

Query: 181 PPSTTAIRNFETLISSIPSNWSNFQITNNISPCLVQTQETNNLLSNSLMYNHYHQNPLVQ 240
              + +  +FE + S+ P +  +    NN    L+Q QE     +N+ M  +Y       
Sbjct: 181 SLISNSFDSFEPISSNTPLHLFD---NNN----LIQIQENQLFSNNNSMQGYY------P 232

Query: 241 MKESCLLGFGSEASCSSSTSDGSYTQI 267
           MK++  L FGSE SCSS  SDGS +QI
Sbjct: 241 MKDN-FLTFGSEQSCSS--SDGSCSQI 232

[Close]
BLAST of Cla005093 vs. NCBI nr
Match: gi|356547159|ref|XP_003541984.1| (PREDICTED: transcription factor RAX2-like [Glycine max])

HSP 1 Score: 263.5 bits (672), Expect = 4.9e-67
Identity = 153/307 (49.84%), Postives = 198/307 (64.50%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+ VK+GPWSPEED+KLKDYI+K+GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDSKLKDYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNIKHG F++EEDRIIC+L++ IGS     RWSIIATQLPGRTDNDIKN+WN+KLKR
Sbjct: 61  YLRPNIKHGEFSDEEDRIICSLYANIGS-----RWSIIATQLPGRTDNDIKNYWNTKLKR 120

Query: 121 KLIGMEKKGQMTTNTTTMTIPSSHNH-------HQQVFSSF----SSQPLSSLIYKDEFN 180
           KL+G+              +P+SH           Q  SSF     S  LSS IY D +N
Sbjct: 121 KLMGL--------------LPASHQRIAPFQQSSPQNLSSFPSHSHSSSLSSSIYSDYYN 180

Query: 181 DINYYNNSFSPPSTTAIRNFETLISSIP-SNWSNFQITNNISPCLVQTQETNNLLSNSLM 240
             +  N+ + P  T++    E +  S+P SN++N    + ++P   Q QE    + + + 
Sbjct: 181 --HNSNHYYMPAPTSSFTCLEPI--SVPSSNYTNTTTASTLNP-FYQNQEPLASIISPMQ 240

Query: 241 YNHYHQNPLVQMKESCLLGFGSEASCSSSTSDGSYTQINNTSGI----MGFQNINPNYYY 292
           Y          +K+S +L FGSE SCSS  SDGS +Q++    +    MGFQN     + 
Sbjct: 241 Y--------YPIKDSSMLVFGSETSCSS--SDGSCSQVSLGREVKQEDMGFQNFMFGDHQ 273

[Close]
BLAST of Cla005093 vs. NCBI nr
Match: gi|595825644|ref|XP_007205438.1| (hypothetical protein PRUPE_ppa007823mg [Prunus persica])

HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66
Identity = 149/276 (53.99%), Postives = 181/276 (65.58%), Query Frame = 1 

Query: 1   MGRSPCCDKSIVKKGPWSPEEDAKLKDYIDKNGTGGNWISLPQKAGLKRCGKSCRLRWLN 60
           MGR+PCCDK+ VKKGPWSPEED+KLK+YI+K GTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKEYIEKQGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGGFTEEEDRIICTLFSTIGSRSRIYRWSIIATQLPGRTDNDIKNHWNSKLKR 120
           YLRPNIKHG F++EEDRIIC+LF++IGS     RWSIIA QLPGRTDNDIKN+WN+KLK+
Sbjct: 61  YLRPNIKHGEFSDEEDRIICSLFASIGS-----RWSIIAAQLPGRTDNDIKNYWNTKLKK 120

Query: 121 KLIGM-------EKKGQMTTNTTTMTIPSSHNHHQQVFSSFSSQPLSSLIYKDEFNDI-N 180
           KL+GM               +      PSS +H+ Q      SQPLSSL     F D+ +
Sbjct: 121 KLMGMHMAPPSHHHHHHQRNSLKPPPFPSSSHHNYQNQPLIPSQPLSSL-----FKDLGS 180

Query: 181 YYNNSFSPPSTTAIRNFE-TLISSIPSNWSNFQITNNISPCLVQTQETNNLLSNSLMYNH 240
            YN SFS         FE   +S   +N+SN    +++ P       T   L  S+ YN+
Sbjct: 181 TYNRSFS-------SGFEIPHLSMTSNNFSNTTTNSSLFP-------TQECLVGSMQYNN 240

Query: 241 YHQNPLVQMKESCLLGFGSEASCSSSTSDGSYTQIN 268
           Y         ++ LL FGSE SCS+S SDGS  QI+
Sbjct: 241 YPVKK--NSNQNNLLMFGSEGSCSTS-SDGSCNQIS 249

The following BLAST results are available for this feature:
BLAST of Cla005093 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB36_ARATH1.9e-5861.54Transcription factor MYB36 OS=Arabidopsis thaliana GN=MYB36 PE=1 SV=1[more]
RAX3_ARATH1.3e-5668.21Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1[more]
RAX2_ARATH1.1e-5542.12Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1[more]
RAX1_ARATH4.0e-5349.79Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1[more]
MYB80_ARATH1.4e-4248.15Transcription factor MYB80 OS=Arabidopsis thaliana GN=MYB80 PE=1 SV=1[more]
BLAST of Cla005093 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUZ6_CUCSA1.7e-13881.16Uncharacterized protein OS=Cucumis sativus GN=Csa_1G109320 PE=4 SV=1[more]
V4UEI6_9ROSI2.0e-6754.68Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028804mg PE=4 SV=1[more]
A0A067FAN8_CITSI2.0e-6754.68Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019787mg PE=4 SV=1[more]
I1M4H4_SOYBN3.4e-6749.84Uncharacterized protein OS=Glycine max GN=GLYMA_13G322900 PE=4 SV=2[more]
A0A0B2QP46_GLYSO3.4e-6749.84Transcription factor RAX3 OS=Glycine soja GN=glysoja_021072 PE=4 SV=1[more]
BLAST of Cla005093 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209713|gb|KGN64809.1|2.4e-13881.16hypothetical protein Csa_1G109320 [Cucumis sativus][more]
gi|659072274|ref|XP_008464692.1|1.7e-11282.13PREDICTED: transcription factor RAX2-like [Cucumis melo][more]
gi|567863640|ref|XP_006424474.1|2.9e-6754.68hypothetical protein CICLE_v10028804mg [Citrus clementina][more]
gi|356547159|ref|XP_003541984.1|4.9e-6749.84PREDICTED: transcription factor RAX2-like [Glycine max][more]
gi|595825644|ref|XP_007205438.1|1.9e-6653.99hypothetical protein PRUPE_ppa007823mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0000785 chromatin
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005093Cla005093.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..62
score: 1.4E-14coord: 69..116
score: 9.1
IPR001005SANT/Myb domainSMARTSM00717santcoord: 67..120
score: 7.5E-10coord: 13..64
score: 6.7
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 70..122
score: 7.1E-21coord: 15..69
score: 4.2
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 13..114
score: 1.72
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 67..122
score: 15.354coord: 9..66
score: 20
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 305..314
score: 2.0E-100coord: 1..187
score: 2.0E
NoneNo IPR availablePANTHERPTHR10641:SF506SUBFAMILY NOT NAMEDcoord: 305..314
score: 2.0E-100coord: 1..187
score: 2.0E