MELO3C033004.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCCCAAATTCATTTTCCTCACCAACACAAAAACCTCCGAACAAAGAAAGAAAAGGAAAATAGTAATCACTATAACACAATCACACAATGGCCATCTCTGTCAAGCTTCTCGCTGCCCTTCTTGTCCTCTCTTTCATTTCCACAGGTATAACTATATAAAATTTCAACTCCATTTTGTCCTTTTCTTCTTTATCGTATCATTTTTCTTTTCCAAGTCGTTGGTCTTTTTTTTTTTTTCTCTTTTCTCTTTTATCTTTCCTATAAAAGTAGTTTTGTGATGAGGTGTGAATACAGCTTTTCTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTTTCCTTTTTAGTAATTTTGCTTATATTCCTACAAAAAGACTAATCACTTAGCATTATGGGTGACACTATACTTTGCCTCTATACTTTTTTTGTTCGTTTTAATCTTTAAATATTTTAAACAATCAGTTTTTGTGAAAAAAAGTACCTTTTTAGTTTTTTTTTTTTTGAAACACGAAATCTTTTAAAAACACAAATTTTAATCAAAATGAATATTTTAAACTTACGTAAAGAAAAATTGACGAAAATAACAAAGTAGGCAAAGTAAAATATTATGAAGTTTCGACTACATAGTTTGTTTTCCTTTTATCATTCTTTGAGAAACACTAGTTGATTTTTTTTAATAATCATTTTGAGATCTTACATAGAAGCTTTATGTTCAAGGTGAACTTAAAAATATTTATTAGAGTTTATTGTTGTATGATCTTAAATCATCCCTGACTTATTCTAACCATTGTTTTTTAGAGCATGATTAAACATCAAAATATAATTGTGTTTTAAGTTGGTGAACTTTGAGATACTGAAGAGCTTATTGGTTTCATTCAGGAAACTGCCAGTGTGTATTGAATAATATAACAATCAGCCAAAAGATGACAGGATTTCAGATCCACGGAATGACAGAATGGGATGTAACAATAACCAACAACTGCATATGTTCTCAATCTGATTTGAAACTAGATTGCAAAGGCTTTGCAACTACTCTAAGCATCGATCCTTCAATCTTATCCATTTCTGATAACGAGTGTTTAGTCAACAATGGCAAACCTATTTTCAATTCCAAACCCATCACCTTCAAGTATGCACAAACCCCCAAATTCAATTTCAAGCCTATCTCCTCCCAGATTTCTTGTTCTTAAAAATCTTATTCATCTATCTTCCTTACGCCCTCTTCTCATTTATGACTTAGTTCAAATTTAGTGTCTTTACACACTTTTATAATAAT TCCCCAAATTCATTTTCCTCACCAACACAAAAACCTCCGAACAAAGAAAGAAAAGGAAAATAGTAATCACTATAACACAATCACACAATGGCCATCTCTGTCAAGCTTCTCGCTGCCCTTCTTGTCCTCTCTTTCATTTCCACAGGAAACTGCCAGTGTGTATTGAATAATATAACAATCAGCCAAAAGATGACAGGATTTCAGATCCACGGAATGACAGAATGGGATGTAACAATAACCAACAACTGCATATGTTCTCAATCTGATTTGAAACTAGATTGCAAAGGCTTTGCAACTACTCTAAGCATCGATCCTTCAATCTTATCCATTTCTGATAACGAGTGTTTAGTCAACAATGGCAAACCTATTTTCAATTCCAAACCCATCACCTTCAAGTATGCACAAACCCCCAAATTCAATTTCAAGCCTATCTCCTCCCAGATTTCTTGTTCTTAAAAATCTTATTCATCTATCTTCCTTACGCCCTCTTCTCATTTATGACTTAGTTCAAATTTAGTGTCTTTACACACTTTTATAATAAT ATGGCCATCTCTGTCAAGCTTCTCGCTGCCCTTCTTGTCCTCTCTTTCATTTCCACAGGAAACTGCCAGTGTGTATTGAATAATATAACAATCAGCCAAAAGATGACAGGATTTCAGATCCACGGAATGACAGAATGGGATGTAACAATAACCAACAACTGCATATGTTCTCAATCTGATTTGAAACTAGATTGCAAAGGCTTTGCAACTACTCTAAGCATCGATCCTTCAATCTTATCCATTTCTGATAACGAGTGTTTAGTCAACAATGGCAAACCTATTTTCAATTCCAAACCCATCACCTTCAAGTATGCACAAACCCCCAAATTCAATTTCAAGCCTATCTCCTCCCAGATTTCTTGTTCTTAA MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSDLKLDCKGFATTLSIDPSILSISDNECLVNNGKPIFNSKPITFKYAQTPKFNFKPISSQISCS
BLAST of MELO3C033004.2 vs. NCBI nr
Match: XP_008440637.1 (PREDICTED: protein TAPETUM DETERMINANT 1-like [Cucumis melo]) HSP 1 Score: 246.1 bits (627), Expect = 6.0e-62 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of MELO3C033004.2 vs. NCBI nr
Match: KGN48771.1 (hypothetical protein Csa_6G500630 [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 3.6e-54 Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of MELO3C033004.2 vs. NCBI nr
Match: XP_022962948.1 (uncharacterized protein At1g05835-like [Cucurbita moschata]) HSP 1 Score: 186.4 bits (472), Expect = 5.7e-44 Identity = 89/122 (72.95%), Postives = 103/122 (84.43%), Query Frame = 0
BLAST of MELO3C033004.2 vs. NCBI nr
Match: XP_023518832.1 (uncharacterized protein LOC111782230 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 176.0 bits (445), Expect = 7.7e-41 Identity = 84/122 (68.85%), Postives = 100/122 (81.97%), Query Frame = 0
BLAST of MELO3C033004.2 vs. NCBI nr
Match: XP_023004032.1 (protein TAPETUM DETERMINANT 1-like [Cucurbita maxima]) HSP 1 Score: 171.4 bits (433), Expect = 1.9e-39 Identity = 82/122 (67.21%), Postives = 99/122 (81.15%), Query Frame = 0
BLAST of MELO3C033004.2 vs. TAIR10
Match: AT4G32090.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein) HSP 1 Score: 78.6 bits (192), Expect = 3.0e-15 Identity = 43/122 (35.25%), Postives = 60/122 (49.18%), Query Frame = 0
BLAST of MELO3C033004.2 vs. TAIR10
Match: AT4G32105.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein) HSP 1 Score: 72.4 bits (176), Expect = 2.2e-13 Identity = 41/117 (35.04%), Postives = 58/117 (49.57%), Query Frame = 0
BLAST of MELO3C033004.2 vs. TAIR10
Match: AT4G24972.1 (tapetum determinant 1) HSP 1 Score: 52.8 bits (125), Expect = 1.8e-07 Identity = 29/88 (32.95%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of MELO3C033004.2 vs. TAIR10
Match: AT1G05835.1 (PHD finger protein) HSP 1 Score: 51.6 bits (122), Expect = 4.0e-07 Identity = 35/116 (30.17%), Postives = 61/116 (52.59%), Query Frame = 0
BLAST of MELO3C033004.2 vs. Swiss-Prot
Match: sp|Q6TLJ2|TPD1_ARATH (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 3.2e-06 Identity = 29/88 (32.95%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of MELO3C033004.2 vs. Swiss-Prot
Match: sp|A8MS78|Y1583_ARATH (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 7.1e-06 Identity = 35/116 (30.17%), Postives = 61/116 (52.59%), Query Frame = 0
BLAST of MELO3C033004.2 vs. TrEMBL
Match: tr|A0A1S3B1L8|A0A1S3B1L8_CUCME (protein TAPETUM DETERMINANT 1-like OS=Cucumis melo OX=3656 GN=LOC103484995 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 4.0e-62 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of MELO3C033004.2 vs. TrEMBL
Match: tr|A0A0A0KLZ6|A0A0A0KLZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500630 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 2.3e-54 Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of MELO3C033004.2 vs. TrEMBL
Match: tr|A0A0A0LEA1|A0A0A0LEA1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875970 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.6e-31 Identity = 69/122 (56.56%), Postives = 83/122 (68.03%), Query Frame = 0
BLAST of MELO3C033004.2 vs. TrEMBL
Match: tr|A0A067F358|A0A067F358_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g040068mg PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.2e-27 Identity = 63/123 (51.22%), Postives = 84/123 (68.29%), Query Frame = 0
BLAST of MELO3C033004.2 vs. TrEMBL
Match: tr|V4UMI7|V4UMI7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009917mg PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 9.3e-27 Identity = 63/123 (51.22%), Postives = 83/123 (67.48%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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