CsGy6G029930 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G029930
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein TAPETUM DETERMINANT 1-like
Location	Chr6 : 28348004 .. 28348935 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAATTTCATTTTCCTCACCAACACAAAAACCTCGGAATAAAAAAAGAAAAGGAAAATAGTAATCTGTAGAACACAATCACAATGCCTATCTTCCCCAAGCTTCTTGCTGCCCTTCTTGTCCTCTCTCTCATTTCCACAGGTATAACTATATGGCATTTCAACTCCATTTTGTCCTTTTCTTTATTTATCCTAACCATTATTCTCTTCCAAGTCATTCCACTTTTTTCTTTTTCCTTTCCTATAAAAGCAGTTTTATGATTAGGTGTGAACATACCTTTTCTATATTCTTCTTTTCTTAAAAATAATTTCGCTTATAGTACTCCTAAATAATGTTTTAAAAAAATCATTTTTCCCCTTATCATTGAAAAGAGAAACTCTTTAGTGTCTTTTCTGAAAGATGGATCGTTAAACAACAAAAACTTGTATCATGTTAAATCAGCAATTAACTCATTAGAGTATGGTTAAACATTCAAATATAATTGTGTTTAAGTAACTGAAGATTGAGATACTGAGAGCTTATGATTGGTTTCAGGAAACTGCCAATGTTTTTTGAACAACATAAAAATCAGCCAAAGCATGACAGGATTTCAGATCCATGGAATGACAGAATGGAAAGTAACAATAACCAACAACTGCATATGTTCTCAATCTGATTTGAAACTAGACTGCAAAGGCTTTGCAACTACTCTAAGCATCGATCCTTCCATCTTAGCCATCTCTGATAGCGAGTGTTTAGTCAACAATGGCCAACCTATTTTCAATTCCAGACCCATCACCTTCAAGTATGCACAAAGCCCCAAATTCAATTTCAAGCCTCTCTCCTCCCAGATATCTTGTTCTTAAAAATCTTATTCATTTTTTACTCGGTTCAAAATTAGTGTCTTTAGACACTTTTATAATAATAAAAACTTATCTTTATTTATTTTGTTT

mRNA sequence

CCCAATTTCATTTTCCTCACCAACACAAAAACCTCGGAATAAAAAAAGAAAAGGAAAATAGTAATCTGTAGAACACAATCACAATGCCTATCTTCCCCAAGCTTCTTGCTGCCCTTCTTGTCCTCTCTCTCATTTCCACAGGAAACTGCCAATGTTTTTTGAACAACATAAAAATCAGCCAAAGCATGACAGGATTTCAGATCCATGGAATGACAGAATGGAAAGTAACAATAACCAACAACTGCATATGTTCTCAATCTGATTTGAAACTAGACTGCAAAGGCTTTGCAACTACTCTAAGCATCGATCCTTCCATCTTAGCCATCTCTGATAGCGAGTGTTTAGTCAACAATGGCCAACCTATTTTCAATTCCAGACCCATCACCTTCAAGTATGCACAAAGCCCCAAATTCAATTTCAAGCCTCTCTCCTCCCAGATATCTTGTTCTTAAAAATCTTATTCATTTTTTACTCGGTTCAAAATTAGTGTCTTTAGACACTTTTATAATAATAAAAACTTATCTTTATTTATTTTGTTT

Coding sequence (CDS)

ATGCCTATCTTCCCCAAGCTTCTTGCTGCCCTTCTTGTCCTCTCTCTCATTTCCACAGGAAACTGCCAATGTTTTTTGAACAACATAAAAATCAGCCAAAGCATGACAGGATTTCAGATCCATGGAATGACAGAATGGAAAGTAACAATAACCAACAACTGCATATGTTCTCAATCTGATTTGAAACTAGACTGCAAAGGCTTTGCAACTACTCTAAGCATCGATCCTTCCATCTTAGCCATCTCTGATAGCGAGTGTTTAGTCAACAATGGCCAACCTATTTTCAATTCCAGACCCATCACCTTCAAGTATGCACAAAGCCCCAAATTCAATTTCAAGCCTCTCTCCTCCCAGATATCTTGTTCTTAA

Protein sequence

MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSDLKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQISCS

Homology

[Close]

BLAST of CsGy6G029930 vs. NCBI nr
Match: KGN48771.1 (hypothetical protein Csa_6G500630 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 7.1e-63
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSD 60
           MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSD
Sbjct: 1   MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSD 60

Query: 61  LKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQIS 120
           LKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQIS
Sbjct: 61  LKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of CsGy6G029930 vs. NCBI nr
Match: XP_008440637.1 (PREDICTED: protein TAPETUM DETERMINANT 1-like [Cucumis melo])

HSP 1 Score: 222.2 bits (565), Expect = 9.3e-55
Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSD 60
           M I  KLLAALLVLS ISTGNCQC LNNI ISQ MTGFQIHGMTEW VTITNNCICSQSD
Sbjct: 1   MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSD 60

Query: 61  LKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQIS 120
           LKLDCKGFATTLSIDPSIL+ISD+ECLVNNG+PIFNS+PITFKYAQ+PKFNFKP+SSQIS
Sbjct: 61  LKLDCKGFATTLSIDPSILSISDNECLVNNGKPIFNSKPITFKYAQTPKFNFKPISSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of CsGy6G029930 vs. NCBI nr
Match: XP_022962948.1 (uncharacterized protein At1g05835-like [Cucurbita moschata])

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43
Identity = 86/117 (73.50%), Postives = 101/117 (86.32%), Query Frame = 0


Query: 6   KLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSDLKLDC 65
           KL AALL +S +S  N QCFL+NI I QSMTGFQIHGMTEW  T++NNC+CSQS++KLDC
Sbjct: 6   KLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDC 65

Query: 66  KGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQISCS 123
           +GF TT SIDP ILAI+D+ECLVNNG PIFNS PITF YAQ+P+FNFKP+SSQI+CS
Sbjct: 66  RGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIACS 122

[Close]

BLAST of CsGy6G029930 vs. NCBI nr
Match: XP_023518832.1 (uncharacterized protein LOC111782230 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.8 bits (447), Expect = 4.5e-41
Identity = 83/122 (68.03%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 1   MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSD 60
           M  F  L AALL +SL+  GN QC  N+I ISQ MTGFQIHGMTEW VTI+NNC+CSQS+
Sbjct: 1   MAPFANLFAALLFVSLLCKGNFQCVPNDIAISQKMTGFQIHGMTEWNVTISNNCLCSQSE 60

Query: 61  LKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQIS 120
           +KLDC+GF TT S+DPSILA++D+ECLVNNG PIF S P+ F YAQ PKF+FK +SSQI+
Sbjct: 61  VKLDCRGFQTTKSVDPSILAVTDTECLVNNGLPIFKSNPVIFTYAQDPKFDFKLISSQIA 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of CsGy6G029930 vs. NCBI nr
Match: XP_023004032.1 (protein TAPETUM DETERMINANT 1-like [Cucurbita maxima])

HSP 1 Score: 175.6 bits (444), Expect = 1.0e-40
Identity = 83/122 (68.03%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 1   MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSD 60
           M  F KL AALL +SL+  GNCQC  N+I I Q+M+GFQIHGMTEW VTI+N C+CSQS+
Sbjct: 1   MAPFAKLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSE 60

Query: 61  LKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQIS 120
           +KLDC+GF TT SIDPS+LA++DSECLVNNG PIF S  ITF YA  PKF+FK +SSQI+
Sbjct: 61  VKLDCRGFQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQIN 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of CsGy6G029930 vs. TAIR10
Match: AT4G32090.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein)

HSP 1 Score: 77.0 bits (188), Expect = 8.8e-15
Identity = 41/117 (35.04%), Postives = 59/117 (50.43%), Query Frame = 0


Query: 6   KLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSDLKLDC 65
           K    +L+LS++S G C C    I+I    TG +I G  EWKVT+ N C C Q  + L C
Sbjct: 6   KCFVVVLLLSMVSHGLCLCTFGKIQIGAVRTGREIGGQPEWKVTVINTCNCFQKHVTLSC 65

Query: 66  KGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQISCS 123
            GFA    + P +L    + CL+  G  +       F YA  P + F+P+ S++  S
Sbjct: 66  GGFAPAKPVKPLLLQPQGNTCLMIKGAALPAGATAQFTYAGQP-YIFRPVGSKVDPS 121

[Close]

BLAST of CsGy6G029930 vs. TAIR10
Match: AT4G32110.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein)

HSP 1 Score: 75.1 bits (183), Expect = 3.3e-14
Identity = 42/117 (35.90%), Postives = 60/117 (51.28%), Query Frame = 0


Query: 6   KLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNC-ICSQSDLKLD 65
           KLL  +L L+ ++ G   C LN++ + QS TG  +    EW+V +TN C  C   + +L 
Sbjct: 7   KLLCLVLFLAFVNQGYGDCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQNTELL 66

Query: 66  CKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQISC 122
           C GF +   ID S+L  S   CLVN G+ I     I FKY     F+ K +   + C
Sbjct: 67  CVGFNSVTPIDTSLLLKSGDACLVNAGKFIVPHVDIVFKYVWDTSFDLKVIDGVMVC 123

[Close]

BLAST of CsGy6G029930 vs. TAIR10
Match: AT4G32105.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein)

HSP 1 Score: 70.5 bits (171), Expect = 8.2e-13
Identity = 39/117 (33.33%), Postives = 56/117 (47.86%), Query Frame = 0


Query: 6   KLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNC-ICSQSDLKLD 65
           K+L  +L L+ ++ G   C LN + + QS TG  +    EW+V +TN C  C     KL 
Sbjct: 7   KVLCLVLFLAFVNQGYGDCHLNYLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQYTKLS 66

Query: 66  CKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQISC 122
           C GF +   +  S+L+ S   CL+N G  IF      F Y     F+ K +   I C
Sbjct: 67  CVGFQSVTPVATSLLSKSGDICLLNAGNFIFPHVDFVFNYVWDTSFDLKVIDGVIVC 123

[Close]

BLAST of CsGy6G029930 vs. TAIR10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 51.2 bits (121), Expect = 5.2e-07
Identity = 28/101 (27.72%), Postives = 56/101 (55.45%), Query Frame = 0


Query: 24  CFLNNIKISQSMTGFQIHGMTEWKVTITNNCI--CSQSDLKLDCKGFATTLSIDPSILAI 83
           C  ++I + Q  T     G+  + V I N+C+  C+ +++ + C  F++   ++P +   
Sbjct: 80  CSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRR 139

Query: 84  SD-SECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQISC 122
            D  +CLVN+GQP+   + ++F+YA S  F++    + +SC
Sbjct: 140 LDYDDCLVNDGQPLGPGQSLSFQYANS--FSYPLSVASVSC 178

[Close]

BLAST of CsGy6G029930 vs. Swiss-Prot
Match: sp|Q1G3T1|TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.3e-06
Identity = 28/101 (27.72%), Postives = 56/101 (55.45%), Query Frame = 0


Query: 24  CFLNNIKISQSMTGFQIHGMTEWKVTITNNCI--CSQSDLKLDCKGFATTLSIDPSILAI 83
           C  ++I + Q  T     G+  + V I N+C+  C+ +++ + C  F++   ++P +   
Sbjct: 80  CSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRR 139

Query: 84  SD-SECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQISC 122
            D  +CLVN+GQP+   + ++F+YA S  F++    + +SC
Sbjct: 140 LDYDDCLVNDGQPLGPGQSLSFQYANS--FSYPLSVASVSC 178

[Close]

BLAST of CsGy6G029930 vs. TrEMBL
Match: tr|A0A0A0KLZ6|A0A0A0KLZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500630 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.7e-63
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSD 60
           MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSD
Sbjct: 1   MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSD 60

Query: 61  LKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQIS 120
           LKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQIS
Sbjct: 61  LKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of CsGy6G029930 vs. TrEMBL
Match: tr|A0A1S3B1L8|A0A1S3B1L8_CUCME (protein TAPETUM DETERMINANT 1-like OS=Cucumis melo OX=3656 GN=LOC103484995 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 6.2e-55
Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSD 60
           M I  KLLAALLVLS ISTGNCQC LNNI ISQ MTGFQIHGMTEW VTITNNCICSQSD
Sbjct: 1   MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSD 60

Query: 61  LKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQIS 120
           LKLDCKGFATTLSIDPSIL+ISD+ECLVNNG+PIFNS+PITFKYAQ+PKFNFKP+SSQIS
Sbjct: 61  LKLDCKGFATTLSIDPSILSISDNECLVNNGKPIFNSKPITFKYAQTPKFNFKPISSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of CsGy6G029930 vs. TrEMBL
Match: tr|A0A0A0LEA1|A0A0A0LEA1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875970 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.9e-33
Identity = 72/117 (61.54%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 6   KLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSDLKLDC 65
           K +  L    L+S GNC+C LN+I ISQ+ TG  + G   WK TITNNCIC QS LKLDC
Sbjct: 6   KFVCVLFFFCLLSKGNCECVLNDIAISQTTTGSIVQGKQVWKATITNNCICGQSSLKLDC 65

Query: 66  KGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQISCS 123
            GF T  ++DPSILA+S S CLVN GQPIF S PI+F YA    F FKPLSSQISCS
Sbjct: 66  NGFNTVQAVDPSILAVSGSVCLVNGGQPIFQSTPISFTYASDNAFPFKPLSSQISCS 122

[Close]

BLAST of CsGy6G029930 vs. TrEMBL
Match: tr|A0A067F358|A0A067F358_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g040068mg PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 9.9e-29
Identity = 63/118 (53.39%), Postives = 84/118 (71.19%), Query Frame = 0


Query: 6   KLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSDLKLDC 65
           K LAA+++ ++I+ GNCQC L++IK+SQS TG  +    EW++T+ N CIC+Q +LKL C
Sbjct: 6   KFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLELKLSC 65

Query: 66  KGFATTLSIDPSILAISDSEC-LVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQISCS 123
           KGF T   IDPSI+AIS  EC +VNNG P +    ++F YA    F FKP+SSQISCS
Sbjct: 66  KGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQISCS 123

[Close]

BLAST of CsGy6G029930 vs. TrEMBL
Match: tr|A0A0A0LDN0|A0A0A0LDN0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875990 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 61/112 (54.46%), Postives = 78/112 (69.64%), Query Frame = 0


Query: 11  LLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSDLKLDCKGFAT 70
           L    L+S GNC+C +N+I+ISQS TG +++G  EW+ TI N C+CSQ  +K DC GF T
Sbjct: 11  LFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNGFNT 70

Query: 71  TLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQISCS 123
              +D SIL ++ S CLVNNGQPIFNS PI+F YA    F F PL SQ++CS
Sbjct: 71  VEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQVACS 122

The following BLAST results are available for this feature:

BLAST of CsGy6G029930 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN48771.1	7.1e-63	100.00	hypothetical protein Csa_6G500630 [Cucumis sativus]	[more]
XP_008440637.1	9.3e-55	88.52	PREDICTED: protein TAPETUM DETERMINANT 1-like [Cucumis melo]	[more]
XP_022962948.1	1.3e-43	73.50	uncharacterized protein At1g05835-like [Cucurbita moschata]	[more]
XP_023518832.1	4.5e-41	68.03	uncharacterized protein LOC111782230 [Cucurbita pepo subsp. pepo]	[more]
XP_023004032.1	1.0e-40	68.03	protein TAPETUM DETERMINANT 1-like [Cucurbita maxima]	[more]

BLAST of CsGy6G029930 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32090.1	8.8e-15	35.04	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32110.1	3.3e-14	35.90	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32105.1	8.2e-13	33.33	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT1G32583.1	5.2e-07	27.72	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of CsGy6G029930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q1G3T1\|TDL1_ARATH	9.3e-06	27.72	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]

BLAST of CsGy6G029930 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KLZ6\|A0A0A0KLZ6_CUCSA	4.7e-63	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500630 PE=4 SV=1	[more]
tr\|A0A1S3B1L8\|A0A1S3B1L8_CUCME	6.2e-55	88.52	protein TAPETUM DETERMINANT 1-like OS=Cucumis melo OX=3656 GN=LOC103484995 PE=4 ...	[more]
tr\|A0A0A0LEA1\|A0A0A0LEA1_CUCSA	3.9e-33	61.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875970 PE=4 SV=1	[more]
tr\|A0A067F358\|A0A067F358_CITSI	9.9e-29	53.39	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g040068mg PE=4 SV=1	[more]
tr\|A0A0A0LDN0\|A0A0A0LDN0_CUCSA	1.3e-28	54.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875990 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G029930.1	CsGy6G029930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184:SF11	BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN	coord: 6..122
None	No IPR available	PANTHER	PTHR33184	FAMILY NOT NAMED	coord: 6..122

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G029930	Csa6G500630	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G029930	CSPI06G30440	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G029930	CmaCh07G005270	Cucurbita maxima (Rimu)	cgybcmaB861
CsGy6G029930	CmoCh07G005250	Cucurbita moschata (Rifu)	cgybcmoB843
CsGy6G029930	Lsi01G007440	Bottle gourd (USVL1VR-Ls)	cgyblsiB398
CsGy6G029930	Cp4.1LG19g09790	Cucurbita pepo (Zucchini)	cgybcpeB810
CsGy6G029930	MELO3C033004.2	Melon (DHL92) v3.6.1	cgybmedB440
CsGy6G029930	CsaV3_6G045660	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G029930	Cla97C01G018450	Watermelon (97103) v2	cgybwmbB394
CsGy6G029930	Carg16010	Silver-seed gourd	carcgybB0753

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G029930	Cucurbita maxima (Rimu)	cgybcmaB831
CsGy6G029930	Cucurbita moschata (Rifu)	cgybcmoB811
CsGy6G029930	Cucurbita moschata (Rifu)	cgybcmoB824
CsGy6G029930	Cucurbita pepo (Zucchini)	cgybcpeB710
CsGy6G029930	Cucurbita pepo (Zucchini)	cgybcpeB808
CsGy6G029930	Melon (DHL92) v3.5.1	cgybmeB444
CsGy6G029930	Watermelon (Charleston Gray)	cgybwcgB399
CsGy6G029930	Watermelon (97103) v1	cgybwmB468
CsGy6G029930	Silver-seed gourd	carcgybB0418
CsGy6G029930	Silver-seed gourd	carcgybB0932
CsGy6G029930	Wax gourd	cgybwgoB592