CmaCh07G005270 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh07G005270
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Beta-1,3-N-Acetylglucosaminyltransferase family protein, putative
Location	Cma_Chr07 : 2291851 .. 2292295 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCCTTCGCCAAGCTTTTCGCTGCTCTTCTCTTCGTGTCTCTCCTTCACAAAGGTATAAATTTCAATTTCCAAGTTCATTTCGTCCTTTTCTTTATTTAGAATTAGATATATATTTTTTTCTTCTTCAGGAAATTGTCAATGTGTTTCGAATGACATAGCAATCCGTCAAACGATGAGCGGATTTCAGATTCATGGAATGACGGAATGGAACGTGACAATAAGCAACATCTGCTTGTGTTCTCAATCAGAAGTGAAGCTCGACTGCAGAGGATTTCAAACTACAAAAAGTATCGATCCCTCAGTATTAGCCGTTACTGATTCTGAATGTTTGGTCAACAATGGACTCCCAATATTCAAATCCAACTCCATCACCTTCACTTATGCACACGACCCTAAATTTGACTTCAAACTAATCTCTTCCCAAATTAATTGTTCCTAA

mRNA sequence

ATGGCTCCCTTCGCCAAGCTTTTCGCTGCTCTTCTCTTCGTGTCTCTCCTTCACAAAGGAAATTGTCAATGTGTTTCGAATGACATAGCAATCCGTCAAACGATGAGCGGATTTCAGATTCATGGAATGACGGAATGGAACGTGACAATAAGCAACATCTGCTTGTGTTCTCAATCAGAAGTGAAGCTCGACTGCAGAGGATTTCAAACTACAAAAAGTATCGATCCCTCAGTATTAGCCGTTACTGATTCTGAATGTTTGGTCAACAATGGACTCCCAATATTCAAATCCAACTCCATCACCTTCACTTATGCACACGACCCTAAATTTGACTTCAAACTAATCTCTTCCCAAATTAATTGTTCCTAA

Coding sequence (CDS)

ATGGCTCCCTTCGCCAAGCTTTTCGCTGCTCTTCTCTTCGTGTCTCTCCTTCACAAAGGAAATTGTCAATGTGTTTCGAATGACATAGCAATCCGTCAAACGATGAGCGGATTTCAGATTCATGGAATGACGGAATGGAACGTGACAATAAGCAACATCTGCTTGTGTTCTCAATCAGAAGTGAAGCTCGACTGCAGAGGATTTCAAACTACAAAAAGTATCGATCCCTCAGTATTAGCCGTTACTGATTCTGAATGTTTGGTCAACAATGGACTCCCAATATTCAAATCCAACTCCATCACCTTCACTTATGCACACGACCCTAAATTTGACTTCAAACTAATCTCTTCCCAAATTAATTGTTCCTAA

Protein sequence

MAPFAKLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSEVKLDCRGFQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQINCS

Homology

[Close]

BLAST of CmaCh07G005270 vs. Swiss-Prot
Match: TDL1_ARATH (TPD1 protein homolog 1 OS=Arabidopsis thaliana GN=TDL1 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-06
Identity = 29/101 (28.71%), Postives = 53/101 (52.48%), Query Frame = 1


Query: 24  CVSNDIAIRQTMSGFQIHGMTEWNVTISNICL--CSQSEVKLDCRGFQTTKSIDPSVLAV 83
           C  +DI + Q  +     G+  + V I N C+  C+ +E+ + C  F + + ++P V   
Sbjct: 80  CSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRR 139

Query: 84  TD-SECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQINC 122
            D  +CLVN+G P+    S++F YA+   F + L  + ++C
Sbjct: 140 LDYDDCLVNDGQPLGPGQSLSFQYAN--SFSYPLSVASVSC 178

[Close]

BLAST of CmaCh07G005270 vs. Swiss-Prot
Match: Y1583_ARATH (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.2e-06
Identity = 33/116 (28.45%), Postives = 62/116 (53.45%), Query Frame = 1


Query: 10  ALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNIC-LCSQSEVKLDCRGF 69
           ALL + +     C+  S++ A+RQT   ++     ++ V + N C +C    ++L C+GF
Sbjct: 14  ALLLLQIGSGAICEGKSSEPAVRQTQVKWREG--KKFRVEVMNKCPMCPIINLRLKCQGF 73

Query: 70  QTTKSIDPSVLAVTDS---ECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQINC 122
             +  +DP+ L V  S    C+VN+GLP+    +++F Y++  +F  + +S    C
Sbjct: 74  PQSL-VDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLSWSFQC 126

[Close]

BLAST of CmaCh07G005270 vs. TrEMBL
Match: A0A0A0KLZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500630 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 5.5e-42
Identity = 83/122 (68.03%), Postives = 99/122 (81.15%), Query Frame = 1


Query: 1   MAPFAKLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSE 60
           M  F KL AALL +SL+  GNCQC  N+I I Q+M+GFQIHGMTEW VTI+N C+CSQS+
Sbjct: 1   MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSD 60

Query: 61  VKLDCRGFQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQIN 120
           +KLDC+GF TT SIDPS+LA++DSECLVNNG PIF S  ITF YA  PKF+FK +SSQI+
Sbjct: 61  LKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of CmaCh07G005270 vs. TrEMBL
Match: A0A0A0LEA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875970 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.4e-31
Identity = 67/122 (54.92%), Postives = 82/122 (67.21%), Query Frame = 1


Query: 1   MAPFAKLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSE 60
           M    K    L F  LL KGNC+CV NDIAI QT +G  + G   W  TI+N C+C QS 
Sbjct: 1   MVASIKFVCVLFFFCLLSKGNCECVLNDIAISQTTTGSIVQGKQVWKATITNNCICGQSS 60

Query: 61  VKLDCRGFQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQIN 120
           +KLDC GF T +++DPS+LAV+ S CLVN G PIF+S  I+FTYA D  F FK +SSQI+
Sbjct: 61  LKLDCNGFNTVQAVDPSILAVSGSVCLVNGGQPIFQSTPISFTYASDNAFPFKPLSSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of CmaCh07G005270 vs. TrEMBL
Match: A0A0A0LDN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875990 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.0e-27
Identity = 60/115 (52.17%), Postives = 74/115 (64.35%), Query Frame = 1


Query: 8   FAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSEVKLDCRG 67
           F  L F  LL KGNC+C  NDI I Q+ +G +++G  EW  TI N C+CSQ  VK DC G
Sbjct: 8   FYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNG 67

Query: 68  FQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQINCS 123
           F T + +D S+L V  S CLVNNG PIF S+ I+FTYA D  F F  + SQ+ CS
Sbjct: 68  FNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQVACS 122

[Close]

BLAST of CmaCh07G005270 vs. TrEMBL
Match: A0A067F358_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040068mg PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.0e-27
Identity = 56/123 (45.53%), Postives = 84/123 (68.29%), Query Frame = 1


Query: 1   MAPFAKLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSE 60
           MA   K  AA++  +++ KGNCQC  +DI + Q+ +G  +    EW +T++N C+C+Q E
Sbjct: 1   MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLE 60

Query: 61  VKLDCRGFQTTKSIDPSVLAVTDSEC-LVNNGLPIFKSNSITFTYAHDPKFDFKLISSQI 120
           +KL C+GFQT + IDPS++A++  EC +VNNG P +   +++F YA D  F FK ISSQI
Sbjct: 61  LKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQI 120

Query: 121 NCS 123
           +CS
Sbjct: 121 SCS 123

[Close]

BLAST of CmaCh07G005270 vs. TrEMBL
Match: A0A0B0NVJ4_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_05114 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 8.6e-27
Identity = 56/122 (45.90%), Postives = 82/122 (67.21%), Query Frame = 1


Query: 1   MAPFAKLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSE 60
           MA    LF  +LF++L+ +G CQC   D+ I QT +G  +    EW  T+ N C+C+QS+
Sbjct: 1   MATTLTLFFVVLFLALIGQGYCQCTLADVKIIQTQTGKTVENKPEWKATVKNDCICTQSD 60

Query: 61  VKLDCRGFQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQIN 120
           +KL C GFQT +++D S++A T +ECL+N G P+  S++++F YA D  F FK +SSQIN
Sbjct: 61  LKLSCDGFQTVEAVDSSLMAKTGAECLINGGQPVASSSNLSFNYAWDTSFPFKPLSSQIN 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of CmaCh07G005270 vs. TAIR10
Match: AT4G32090.1 (AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein)

HSP 1 Score: 75.5 bits (184), Expect = 2.6e-14
Identity = 41/122 (33.61%), Postives = 60/122 (49.18%), Query Frame = 1


Query: 1   MAPFAKLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSE 60
           MA   K F  +L +S++  G C C    I I    +G +I G  EW VT+ N C C Q  
Sbjct: 1   MAFALKCFVVVLLLSMVSHGLCLCTFGKIQIGAVRTGREIGGQPEWKVTVINTCNCFQKH 60

Query: 61  VKLDCRGFQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQIN 120
           V L C GF   K + P +L    + CL+  G  +    +  FTYA  P + F+ + S+++
Sbjct: 61  VTLSCGGFAPAKPVKPLLLQPQGNTCLMIKGAALPAGATAQFTYAGQP-YIFRPVGSKVD 120

Query: 121 CS 123
            S
Sbjct: 121 PS 121

[Close]

BLAST of CmaCh07G005270 vs. TAIR10
Match: AT4G32110.1 (AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein)

HSP 1 Score: 73.6 bits (179), Expect = 9.7e-14
Identity = 38/117 (32.48%), Postives = 59/117 (50.43%), Query Frame = 1


Query: 6   KLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNIC-LCSQSEVKLD 65
           KL   +LF++ +++G   C  N ++++Q+ +G  +    EW V ++N C  C     +L 
Sbjct: 7   KLLCLVLFLAFVNQGYGDCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQNTELL 66

Query: 66  CRGFQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQINC 122
           C GF +   ID S+L  +   CLVN G  I     I F Y  D  FD K+I   + C
Sbjct: 67  CVGFNSVTPIDTSLLLKSGDACLVNAGKFIVPHVDIVFKYVWDTSFDLKVIDGVMVC 123

[Close]

BLAST of CmaCh07G005270 vs. TAIR10
Match: AT4G32105.1 (AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein)

HSP 1 Score: 72.8 bits (177), Expect = 1.7e-13
Identity = 37/117 (31.62%), Postives = 60/117 (51.28%), Query Frame = 1


Query: 6   KLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNIC-LCSQSEVKLD 65
           K+   +LF++ +++G   C  N ++++Q+ +G  +    EW V ++N C  C     KL 
Sbjct: 7   KVLCLVLFLAFVNQGYGDCHLNYLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQYTKLS 66

Query: 66  CRGFQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQINC 122
           C GFQ+   +  S+L+ +   CL+N G  IF      F Y  D  FD K+I   I C
Sbjct: 67  CVGFQSVTPVATSLLSKSGDICLLNAGNFIFPHVDFVFNYVWDTSFDLKVIDGVIVC 123

[Close]

BLAST of CmaCh07G005270 vs. TAIR10
Match: AT1G32583.1 (AT1G32583.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 53.5 bits (127), Expect = 1.0e-07
Identity = 29/101 (28.71%), Postives = 53/101 (52.48%), Query Frame = 1


Query: 24  CVSNDIAIRQTMSGFQIHGMTEWNVTISNICL--CSQSEVKLDCRGFQTTKSIDPSVLAV 83
           C  +DI + Q  +     G+  + V I N C+  C+ +E+ + C  F + + ++P V   
Sbjct: 80  CSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRR 139

Query: 84  TD-SECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQINC 122
            D  +CLVN+G P+    S++F YA+   F + L  + ++C
Sbjct: 140 LDYDDCLVNDGQPLGPGQSLSFQYAN--SFSYPLSVASVSC 178

[Close]

BLAST of CmaCh07G005270 vs. TAIR10
Match: AT1G05835.1 (AT1G05835.1 PHD finger protein)

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-07
Identity = 33/116 (28.45%), Postives = 62/116 (53.45%), Query Frame = 1


Query: 10  ALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNIC-LCSQSEVKLDCRGF 69
           ALL + +     C+  S++ A+RQT   ++     ++ V + N C +C    ++L C+GF
Sbjct: 14  ALLLLQIGSGAICEGKSSEPAVRQTQVKWREG--KKFRVEVMNKCPMCPIINLRLKCQGF 73

Query: 70  QTTKSIDPSVLAVTDS---ECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQINC 122
             +  +DP+ L V  S    C+VN+GLP+    +++F Y++  +F  + +S    C
Sbjct: 74  PQSL-VDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLSWSFQC 126

[Close]

BLAST of CmaCh07G005270 vs. NCBI nr
Match: gi|700193567|gb|KGN48771.1| (hypothetical protein Csa_6G500630 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 8.0e-42
Identity = 83/122 (68.03%), Postives = 99/122 (81.15%), Query Frame = 1


Query: 1   MAPFAKLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSE 60
           M  F KL AALL +SL+  GNCQC  N+I I Q+M+GFQIHGMTEW VTI+N C+CSQS+
Sbjct: 1   MPIFPKLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSD 60

Query: 61  VKLDCRGFQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQIN 120
           +KLDC+GF TT SIDPS+LA++DSECLVNNG PIF S  ITF YA  PKF+FK +SSQI+
Sbjct: 61  LKLDCKGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of CmaCh07G005270 vs. NCBI nr
Match: gi|659080150|ref|XP_008440637.1| (PREDICTED: uncharacterized protein LOC103484995 [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 4.0e-41
Identity = 82/122 (67.21%), Postives = 99/122 (81.15%), Query Frame = 1


Query: 1   MAPFAKLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSE 60
           MA   KL AALL +S +  GNCQCV N+I I Q M+GFQIHGMTEW+VTI+N C+CSQS+
Sbjct: 1   MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSD 60

Query: 61  VKLDCRGFQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQIN 120
           +KLDC+GF TT SIDPS+L+++D+ECLVNNG PIF S  ITF YA  PKF+FK ISSQI+
Sbjct: 61  LKLDCKGFATTLSIDPSILSISDNECLVNNGKPIFNSKPITFKYAQTPKFNFKPISSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of CmaCh07G005270 vs. NCBI nr
Match: gi|700204940|gb|KGN60073.1| (hypothetical protein Csa_3G875970 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 4.8e-31
Identity = 67/122 (54.92%), Postives = 82/122 (67.21%), Query Frame = 1


Query: 1   MAPFAKLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSE 60
           M    K    L F  LL KGNC+CV NDIAI QT +G  + G   W  TI+N C+C QS 
Sbjct: 1   MVASIKFVCVLFFFCLLSKGNCECVLNDIAISQTTTGSIVQGKQVWKATITNNCICGQSS 60

Query: 61  VKLDCRGFQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQIN 120
           +KLDC GF T +++DPS+LAV+ S CLVN G PIF+S  I+FTYA D  F FK +SSQI+
Sbjct: 61  LKLDCNGFNTVQAVDPSILAVSGSVCLVNGGQPIFQSTPISFTYASDNAFPFKPLSSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

[Close]

BLAST of CmaCh07G005270 vs. NCBI nr
Match: gi|700204942|gb|KGN60075.1| (hypothetical protein Csa_3G875990 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 4.2e-27
Identity = 60/115 (52.17%), Postives = 74/115 (64.35%), Query Frame = 1


Query: 8   FAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSEVKLDCRG 67
           F  L F  LL KGNC+C  NDI I Q+ +G +++G  EW  TI N C+CSQ  VK DC G
Sbjct: 8   FYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYSVKFDCNG 67

Query: 68  FQTTKSIDPSVLAVTDSECLVNNGLPIFKSNSITFTYAHDPKFDFKLISSQINCS 123
           F T + +D S+L V  S CLVNNG PIF S+ I+FTYA D  F F  + SQ+ CS
Sbjct: 68  FNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQVACS 122

[Close]

BLAST of CmaCh07G005270 vs. NCBI nr
Match: gi|641842906|gb|KDO61809.1| (hypothetical protein CISIN_1g040068mg [Citrus sinensis])

HSP 1 Score: 128.6 bits (322), Expect = 7.2e-27
Identity = 56/123 (45.53%), Postives = 84/123 (68.29%), Query Frame = 1


Query: 1   MAPFAKLFAALLFVSLLHKGNCQCVSNDIAIRQTMSGFQIHGMTEWNVTISNICLCSQSE 60
           MA   K  AA++  +++ KGNCQC  +DI + Q+ +G  +    EW +T++N C+C+Q E
Sbjct: 1   MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLE 60

Query: 61  VKLDCRGFQTTKSIDPSVLAVTDSEC-LVNNGLPIFKSNSITFTYAHDPKFDFKLISSQI 120
           +KL C+GFQT + IDPS++A++  EC +VNNG P +   +++F YA D  F FK ISSQI
Sbjct: 61  LKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQI 120

Query: 121 NCS 123
           +CS
Sbjct: 121 SCS 123

The following BLAST results are available for this feature:

BLAST of CmaCh07G005270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TDL1_ARATH	1.9e-06	28.71	TPD1 protein homolog 1 OS=Arabidopsis thaliana GN=TDL1 PE=2 SV=1	[more]
Y1583_ARATH	3.2e-06	28.45	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana GN=At1g05835 PE=2 SV=1	[more]

BLAST of CmaCh07G005270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLZ6_CUCSA	5.5e-42	68.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500630 PE=4 SV=1	[more]
A0A0A0LEA1_CUCSA	3.4e-31	54.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875970 PE=4 SV=1	[more]
A0A0A0LDN0_CUCSA	3.0e-27	52.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875990 PE=4 SV=1	[more]
A0A067F358_CITSI	5.0e-27	45.53	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040068mg PE=4 SV=1	[more]
A0A0B0NVJ4_GOSAR	8.6e-27	45.90	Uncharacterized protein OS=Gossypium arboreum GN=F383_05114 PE=4 SV=1	[more]

BLAST of CmaCh07G005270 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32090.1	2.6e-14	33.61	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32110.1	9.7e-14	32.48	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32105.1	1.7e-13	31.62	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT1G32583.1	1.0e-07	28.71	FUNCTIONS IN: molecular_function unknown	[more]
AT1G05835.1	1.8e-07	28.45	PHD finger protein	[more]

BLAST of CmaCh07G005270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700193567\|gb\|KGN48771.1\|	8.0e-42	68.03	hypothetical protein Csa_6G500630 [Cucumis sativus]	[more]
gi\|659080150\|ref\|XP_008440637.1\|	4.0e-41	67.21	PREDICTED: uncharacterized protein LOC103484995 [Cucumis melo]	[more]
gi\|700204940\|gb\|KGN60073.1\|	4.8e-31	54.92	hypothetical protein Csa_3G875970 [Cucumis sativus]	[more]
gi\|700204942\|gb\|KGN60075.1\|	4.2e-27	52.17	hypothetical protein Csa_3G875990 [Cucumis sativus]	[more]
gi\|641842906\|gb\|KDO61809.1\|	7.2e-27	45.53	hypothetical protein CISIN_1g040068mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G005270.1	CmaCh07G005270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33184	FAMILY NOT NAMED	coord: 1..122 score: 7.8
None	No IPR available	PANTHER	PTHR33184:SF11	BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN	coord: 1..122 score: 7.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh07G005270	Cucsa.104590	Cucumber (Gy14) v1	cgycmaB0235
CmaCh07G005270	Csa6G500630	Cucumber (Chinese Long) v2	cmacuB877
CmaCh07G005270	CSPI06G30440	Wild cucumber (PI 183967)	cmacpiB893
CmaCh07G005270	CmoCh07G005250	Cucurbita moschata (Rifu)	cmacmoB875
CmaCh07G005270	Lsi01G007440	Bottle gourd (USVL1VR-Ls)	cmalsiB786
CmaCh07G005270	Cp4.1LG19g09790	Cucurbita pepo (Zucchini)	cmacpeB880
CmaCh07G005270	MELO3C033004.2	Melon (DHL92) v3.6.1	cmamedB907
CmaCh07G005270	CsaV3_6G045660	Cucumber (Chinese Long) v3	cmacucB1035
CmaCh07G005270	Cla97C01G018450	Watermelon (97103) v2	cmawmbB875
CmaCh07G005270	CsGy6G029930	Cucumber (Gy14) v2	cgybcmaB861
CmaCh07G005270	Carg16010	Silver-seed gourd	carcmaB1056

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh07G005270	Silver-seed gourd	carcmaB0571
CmaCh07G005270	Silver-seed gourd	carcmaB1289
CmaCh07G005270	Silver-seed gourd	carcmaB1415
CmaCh07G005270	Wax gourd	cmawgoB1072
CmaCh07G005270	Cucurbita maxima (Rimu)	cmacmaB523
CmaCh07G005270	Cucurbita maxima (Rimu)	cmacmaB546
CmaCh07G005270	Cucurbita moschata (Rifu)	cmacmoB858
CmaCh07G005270	Melon (DHL92) v3.5.1	cmameB796
CmaCh07G005270	Melon (DHL92) v3.5.1	cmameB809
CmaCh07G005270	Watermelon (Charleston Gray)	cmawcgB754
CmaCh07G005270	Watermelon (97103) v1	cmawmB826
CmaCh07G005270	Cucurbita pepo (Zucchini)	cmacpeB866
CmaCh07G005270	Cucurbita pepo (Zucchini)	cmacpeB876