CmoCh07G005250 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCCTCTGCCAAGCTTTTCGCTGCGCTTCTCTTCGTCTCTTTTCTTTCCAAAGGTATAAATTTAAATTTTTATGGTTTATTTCCTCTTTATCTTCCCATTATCACGATATTTTTTAAATATTATTTATTCTTCCAGAAAATTCTCAGTGTTTTTTGAGCAACATAACAATCCGCCAAAGTATGACTGGATTTCAAATTCATGGAATGACAGAATGGAACACGACAGTAAGTAACAACTGTTTGTGTTCTCAATCAGAAGTGAAACTTGATTGCAGAGGATTTCAAACTACAAAAAGCATCGATCCTTTGATATTAGCCATTACCGACACTGAATGCTTAGTCAACAATGGACTCCCAATCTTCAACTCAACCCCTATCACCTTCACTTATGCACAAAACCCTCAATTCAACTTCAAACCAATCTCTTCTCAAATCGCTTGTTCTTAA ATGGCTCCCTCTGCCAAGCTTTTCGCTGCGCTTCTCTTCGTCTCTTTTCTTTCCAAAGAAAATTCTCAGTGTTTTTTGAGCAACATAACAATCCGCCAAAGTATGACTGGATTTCAAATTCATGGAATGACAGAATGGAACACGACAGTAAGTAACAACTGTTTGTGTTCTCAATCAGAAGTGAAACTTGATTGCAGAGGATTTCAAACTACAAAAAGCATCGATCCTTTGATATTAGCCATTACCGACACTGAATGCTTAGTCAACAATGGACTCCCAATCTTCAACTCAACCCCTATCACCTTCACTTATGCACAAAACCCTCAATTCAACTTCAAACCAATCTCTTCTCAAATCGCTTGTTCTTAA ATGGCTCCCTCTGCCAAGCTTTTCGCTGCGCTTCTCTTCGTCTCTTTTCTTTCCAAAGAAAATTCTCAGTGTTTTTTGAGCAACATAACAATCCGCCAAAGTATGACTGGATTTCAAATTCATGGAATGACAGAATGGAACACGACAGTAAGTAACAACTGTTTGTGTTCTCAATCAGAAGTGAAACTTGATTGCAGAGGATTTCAAACTACAAAAAGCATCGATCCTTTGATATTAGCCATTACCGACACTGAATGCTTAGTCAACAATGGACTCCCAATCTTCAACTCAACCCCTATCACCTTCACTTATGCACAAAACCCTCAATTCAACTTCAAACCAATCTCTTCTCAAATCGCTTGTTCTTAA
BLAST of CmoCh07G005250 vs. TrEMBL
Match: A0A0A0KLZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500630 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 5.9e-44 Identity = 86/117 (73.50%), Postives = 101/117 (86.32%), Query Frame = 1
BLAST of CmoCh07G005250 vs. TrEMBL
Match: A0A0A0LEA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875970 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 2.4e-29 Identity = 63/122 (51.64%), Postives = 82/122 (67.21%), Query Frame = 1
BLAST of CmoCh07G005250 vs. TrEMBL
Match: A0A0A0LDN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875990 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 6.6e-27 Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 1
BLAST of CmoCh07G005250 vs. TrEMBL
Match: A0A067F358_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040068mg PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.1e-24 Identity = 58/123 (47.15%), Postives = 81/123 (65.85%), Query Frame = 1
BLAST of CmoCh07G005250 vs. TrEMBL
Match: V4UMI7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009917mg PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 6.8e-24 Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = 1
BLAST of CmoCh07G005250 vs. TAIR10
Match: AT4G32110.1 (AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein) HSP 1 Score: 67.4 bits (163), Expect = 7.0e-12 Identity = 37/119 (31.09%), Postives = 59/119 (49.58%), Query Frame = 1
BLAST of CmoCh07G005250 vs. TAIR10
Match: AT4G32105.1 (AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein) HSP 1 Score: 67.4 bits (163), Expect = 7.0e-12 Identity = 36/119 (30.25%), Postives = 59/119 (49.58%), Query Frame = 1
BLAST of CmoCh07G005250 vs. TAIR10
Match: AT4G32100.1 (AT4G32100.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein) HSP 1 Score: 53.9 bits (128), Expect = 8.0e-08 Identity = 33/121 (27.27%), Postives = 58/121 (47.93%), Query Frame = 1
BLAST of CmoCh07G005250 vs. NCBI nr
Match: gi|659080150|ref|XP_008440637.1| (PREDICTED: uncharacterized protein LOC103484995 [Cucumis melo]) HSP 1 Score: 188.0 bits (476), Expect = 1.0e-44 Identity = 89/122 (72.95%), Postives = 103/122 (84.43%), Query Frame = 1
BLAST of CmoCh07G005250 vs. NCBI nr
Match: gi|700193567|gb|KGN48771.1| (hypothetical protein Csa_6G500630 [Cucumis sativus]) HSP 1 Score: 184.9 bits (468), Expect = 8.5e-44 Identity = 86/117 (73.50%), Postives = 101/117 (86.32%), Query Frame = 1
BLAST of CmoCh07G005250 vs. NCBI nr
Match: gi|700204940|gb|KGN60073.1| (hypothetical protein Csa_3G875970 [Cucumis sativus]) HSP 1 Score: 136.3 bits (342), Expect = 3.5e-29 Identity = 63/122 (51.64%), Postives = 82/122 (67.21%), Query Frame = 1
BLAST of CmoCh07G005250 vs. NCBI nr
Match: gi|700204942|gb|KGN60075.1| (hypothetical protein Csa_3G875990 [Cucumis sativus]) HSP 1 Score: 128.3 bits (321), Expect = 9.4e-27 Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 1
BLAST of CmoCh07G005250 vs. NCBI nr
Match: gi|659133309|ref|XP_008466664.1| (PREDICTED: uncharacterized protein LOC103504019 [Cucumis melo]) HSP 1 Score: 124.0 bits (310), Expect = 1.8e-25 Identity = 54/102 (52.94%), Postives = 72/102 (70.59%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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