CmoCh07G005250 (gene) Cucurbita moschata (Rifu)

NameCmoCh07G005250
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionBeta-1,3-N-acetylglucosaminyltransferase family protein
LocationCmo_Chr07 : 2403874 .. 2404325 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCCTCTGCCAAGCTTTTCGCTGCGCTTCTCTTCGTCTCTTTTCTTTCCAAAGGTATAAATTTAAATTTTTATGGTTTATTTCCTCTTTATCTTCCCATTATCACGATATTTTTTAAATATTATTTATTCTTCCAGAAAATTCTCAGTGTTTTTTGAGCAACATAACAATCCGCCAAAGTATGACTGGATTTCAAATTCATGGAATGACAGAATGGAACACGACAGTAAGTAACAACTGTTTGTGTTCTCAATCAGAAGTGAAACTTGATTGCAGAGGATTTCAAACTACAAAAAGCATCGATCCTTTGATATTAGCCATTACCGACACTGAATGCTTAGTCAACAATGGACTCCCAATCTTCAACTCAACCCCTATCACCTTCACTTATGCACAAAACCCTCAATTCAACTTCAAACCAATCTCTTCTCAAATCGCTTGTTCTTAA

mRNA sequence

ATGGCTCCCTCTGCCAAGCTTTTCGCTGCGCTTCTCTTCGTCTCTTTTCTTTCCAAAGAAAATTCTCAGTGTTTTTTGAGCAACATAACAATCCGCCAAAGTATGACTGGATTTCAAATTCATGGAATGACAGAATGGAACACGACAGTAAGTAACAACTGTTTGTGTTCTCAATCAGAAGTGAAACTTGATTGCAGAGGATTTCAAACTACAAAAAGCATCGATCCTTTGATATTAGCCATTACCGACACTGAATGCTTAGTCAACAATGGACTCCCAATCTTCAACTCAACCCCTATCACCTTCACTTATGCACAAAACCCTCAATTCAACTTCAAACCAATCTCTTCTCAAATCGCTTGTTCTTAA

Coding sequence (CDS)

ATGGCTCCCTCTGCCAAGCTTTTCGCTGCGCTTCTCTTCGTCTCTTTTCTTTCCAAAGAAAATTCTCAGTGTTTTTTGAGCAACATAACAATCCGCCAAAGTATGACTGGATTTCAAATTCATGGAATGACAGAATGGAACACGACAGTAAGTAACAACTGTTTGTGTTCTCAATCAGAAGTGAAACTTGATTGCAGAGGATTTCAAACTACAAAAAGCATCGATCCTTTGATATTAGCCATTACCGACACTGAATGCTTAGTCAACAATGGACTCCCAATCTTCAACTCAACCCCTATCACCTTCACTTATGCACAAAACCCTCAATTCAACTTCAAACCAATCTCTTCTCAAATCGCTTGTTCTTAA
BLAST of CmoCh07G005250 vs. TrEMBL
Match: A0A0A0KLZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500630 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 5.9e-44
Identity = 86/117 (73.50%), Postives = 101/117 (86.32%), Query Frame = 1

Query: 6   KLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDC 65
           KL AALL +S +S  N QCFL+NI I QSMTGFQIHGMTEW  T++NNC+CSQS++KLDC
Sbjct: 6   KLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSDLKLDC 65

Query: 66  RGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIACS 123
           +GF TT SIDP ILAI+D+ECLVNNG PIFNS PITF YAQ+P+FNFKP+SSQI+CS
Sbjct: 66  KGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQISCS 122

BLAST of CmoCh07G005250 vs. TrEMBL
Match: A0A0A0LEA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875970 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.4e-29
Identity = 63/122 (51.64%), Postives = 82/122 (67.21%), Query Frame = 1

Query: 1   MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSE 60
           M  S K    L F   LSK N +C L++I I Q+ TG  + G   W  T++NNC+C QS 
Sbjct: 1   MVASIKFVCVLFFFCLLSKGNCECVLNDIAISQTTTGSIVQGKQVWKATITNNCICGQSS 60

Query: 61  VKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIA 120
           +KLDC GF T +++DP ILA++ + CLVN G PIF STPI+FTYA +  F FKP+SSQI+
Sbjct: 61  LKLDCNGFNTVQAVDPSILAVSGSVCLVNGGQPIFQSTPISFTYASDNAFPFKPLSSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

BLAST of CmoCh07G005250 vs. TrEMBL
Match: A0A0A0LDN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875990 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 6.6e-27
Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 1

Query: 1   MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSE 60
           M  S   F  L F   LSK N +C +++I I QS TG +++G  EW  T+ N C+CSQ  
Sbjct: 1   MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYS 60

Query: 61  VKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIA 120
           VK DC GF T + +D  IL +  + CLVNNG PIFNS+PI+FTYA +  F F P+ SQ+A
Sbjct: 61  VKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQVA 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

BLAST of CmoCh07G005250 vs. TrEMBL
Match: A0A067F358_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040068mg PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-24
Identity = 58/123 (47.15%), Postives = 81/123 (65.85%), Query Frame = 1

Query: 1   MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSE 60
           MA   K  AA++  + ++K N QC L +I + QS TG  +    EW  T++N C+C+Q E
Sbjct: 1   MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLE 60

Query: 61  VKLDCRGFQTTKSIDPLILAITDTEC-LVNNGLPIFNSTPITFTYAQNPQFNFKPISSQI 120
           +KL C+GFQT + IDP I+AI+  EC +VNNG P +  T ++F YA +  F FKPISSQI
Sbjct: 61  LKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQI 120

Query: 121 ACS 123
           +CS
Sbjct: 121 SCS 123

BLAST of CmoCh07G005250 vs. TrEMBL
Match: V4UMI7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009917mg PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.8e-24
Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = 1

Query: 1   MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSE 60
           MA   K  AA++  + ++K N QC L +I + QS TG  +    EW  T++N C+C+Q  
Sbjct: 1   MAAILKFLAAIMLFTIITKGNCQCTLDDIKVSQSQTGKTVPNKQEWRLTLNNTCICTQLG 60

Query: 61  VKLDCRGFQTTKSIDPLILAITDTEC-LVNNGLPIFNSTPITFTYAQNPQFNFKPISSQI 120
           +KL C+GFQT + IDP I+AI+  EC +VNNG P +  T ++F YA +  F FKPISSQI
Sbjct: 61  LKLSCKGFQTVEPIDPSIIAISGDECTVVNNGNPFYGFTTLSFNYAWDTSFPFKPISSQI 120

Query: 121 ACS 123
           +CS
Sbjct: 121 SCS 123

BLAST of CmoCh07G005250 vs. TAIR10
Match: AT4G32110.1 (AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein)

HSP 1 Score: 67.4 bits (163), Expect = 7.0e-12
Identity = 37/119 (31.09%), Postives = 59/119 (49.58%), Query Frame = 1

Query: 4   SAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNC-LCSQSEVK 63
           + KL   +LF++F+++    C L++++++QS TG  +    EW   V+N C  C     +
Sbjct: 5   ACKLLCLVLFLAFVNQGYGDCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQNTE 64

Query: 64  LDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIAC 122
           L C GF +   ID  +L  +   CLVN G  I     I F Y  +  F+ K I   + C
Sbjct: 65  LLCVGFNSVTPIDTSLLLKSGDACLVNAGKFIVPHVDIVFKYVWDTSFDLKVIDGVMVC 123

BLAST of CmoCh07G005250 vs. TAIR10
Match: AT4G32105.1 (AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein)

HSP 1 Score: 67.4 bits (163), Expect = 7.0e-12
Identity = 36/119 (30.25%), Postives = 59/119 (49.58%), Query Frame = 1

Query: 4   SAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNC-LCSQSEVK 63
           + K+   +LF++F+++    C L+ ++++QS TG  +    EW   V+N C  C     K
Sbjct: 5   ACKVLCLVLFLAFVNQGYGDCHLNYLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQYTK 64

Query: 64  LDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIAC 122
           L C GFQ+   +   +L+ +   CL+N G  IF      F Y  +  F+ K I   I C
Sbjct: 65  LSCVGFQSVTPVATSLLSKSGDICLLNAGNFIFPHVDFVFNYVWDTSFDLKVIDGVIVC 123

BLAST of CmoCh07G005250 vs. TAIR10
Match: AT4G32100.1 (AT4G32100.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein)

HSP 1 Score: 53.9 bits (128), Expect = 8.0e-08
Identity = 33/121 (27.27%), Postives = 58/121 (47.93%), Query Frame = 1

Query: 4   SAKLFAALLFVSFLSKE--NSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEV 63
           + K    +L  +F+++   +    L ++++ QS TG  +    EW   V N+  C  +  
Sbjct: 5   ACKFLCLVLLFAFVTQGYGDDSYSLESLSVIQSKTGNMVENKPEWEVKVLNSSPCYFTHT 64

Query: 64  KLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIAC 123
            L C  F++   ID  +L+ +   CL+ NG  I +   I+F Y  +  F+ K +   IAC
Sbjct: 65  TLSCVRFKSVTPIDSKVLSKSGDTCLLGNGDSIHD---ISFKYVWDTSFDLKVVDGYIAC 122

BLAST of CmoCh07G005250 vs. NCBI nr
Match: gi|659080150|ref|XP_008440637.1| (PREDICTED: uncharacterized protein LOC103484995 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 1.0e-44
Identity = 89/122 (72.95%), Postives = 103/122 (84.43%), Query Frame = 1

Query: 1   MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSE 60
           MA S KL AALL +SF+S  N QC L+NITI Q MTGFQIHGMTEW+ T++NNC+CSQS+
Sbjct: 1   MAISVKLLAALLVLSFISTGNCQCVLNNITISQKMTGFQIHGMTEWDVTITNNCICSQSD 60

Query: 61  VKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIA 120
           +KLDC+GF TT SIDP IL+I+D ECLVNNG PIFNS PITF YAQ P+FNFKPISSQI+
Sbjct: 61  LKLDCKGFATTLSIDPSILSISDNECLVNNGKPIFNSKPITFKYAQTPKFNFKPISSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

BLAST of CmoCh07G005250 vs. NCBI nr
Match: gi|700193567|gb|KGN48771.1| (hypothetical protein Csa_6G500630 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 8.5e-44
Identity = 86/117 (73.50%), Postives = 101/117 (86.32%), Query Frame = 1

Query: 6   KLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDC 65
           KL AALL +S +S  N QCFL+NI I QSMTGFQIHGMTEW  T++NNC+CSQS++KLDC
Sbjct: 6   KLLAALLVLSLISTGNCQCFLNNIKISQSMTGFQIHGMTEWKVTITNNCICSQSDLKLDC 65

Query: 66  RGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIACS 123
           +GF TT SIDP ILAI+D+ECLVNNG PIFNS PITF YAQ+P+FNFKP+SSQI+CS
Sbjct: 66  KGFATTLSIDPSILAISDSECLVNNGQPIFNSRPITFKYAQSPKFNFKPLSSQISCS 122

BLAST of CmoCh07G005250 vs. NCBI nr
Match: gi|700204940|gb|KGN60073.1| (hypothetical protein Csa_3G875970 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 3.5e-29
Identity = 63/122 (51.64%), Postives = 82/122 (67.21%), Query Frame = 1

Query: 1   MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSE 60
           M  S K    L F   LSK N +C L++I I Q+ TG  + G   W  T++NNC+C QS 
Sbjct: 1   MVASIKFVCVLFFFCLLSKGNCECVLNDIAISQTTTGSIVQGKQVWKATITNNCICGQSS 60

Query: 61  VKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIA 120
           +KLDC GF T +++DP ILA++ + CLVN G PIF STPI+FTYA +  F FKP+SSQI+
Sbjct: 61  LKLDCNGFNTVQAVDPSILAVSGSVCLVNGGQPIFQSTPISFTYASDNAFPFKPLSSQIS 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

BLAST of CmoCh07G005250 vs. NCBI nr
Match: gi|700204942|gb|KGN60075.1| (hypothetical protein Csa_3G875990 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 9.4e-27
Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 1

Query: 1   MAPSAKLFAALLFVSFLSKENSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSE 60
           M  S   F  L F   LSK N +C +++I I QS TG +++G  EW  T+ N C+CSQ  
Sbjct: 1   MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCVCSQYS 60

Query: 61  VKLDCRGFQTTKSIDPLILAITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIA 120
           VK DC GF T + +D  IL +  + CLVNNG PIFNS+PI+FTYA +  F F P+ SQ+A
Sbjct: 61  VKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQVA 120

Query: 121 CS 123
           CS
Sbjct: 121 CS 122

BLAST of CmoCh07G005250 vs. NCBI nr
Match: gi|659133309|ref|XP_008466664.1| (PREDICTED: uncharacterized protein LOC103504019 [Cucumis melo])

HSP 1 Score: 124.0 bits (310), Expect = 1.8e-25
Identity = 54/102 (52.94%), Postives = 72/102 (70.59%), Query Frame = 1

Query: 21  NSQCFLSNITIRQSMTGFQIHGMTEWNTTVSNNCLCSQSEVKLDCRGFQTTKSIDPLILA 80
           N QC +++I I QS TG +++G  EW  T+ N C+CSQ  VK DC GF T + +D  IL 
Sbjct: 8   NCQCSINDIVISQSTTGKEVNGKQEWRATIRNKCVCSQYSVKFDCNGFNTVEKVDESILM 67

Query: 81  ITDTECLVNNGLPIFNSTPITFTYAQNPQFNFKPISSQIACS 123
           +  + CLVNNG PIFNS+PI+FTYA +  F+FKP+ SQ+ACS
Sbjct: 68  VAGSVCLVNNGQPIFNSSPISFTYAWDNAFSFKPLFSQVACS 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KLZ6_CUCSA5.9e-4473.50Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500630 PE=4 SV=1[more]
A0A0A0LEA1_CUCSA2.4e-2951.64Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875970 PE=4 SV=1[more]
A0A0A0LDN0_CUCSA6.6e-2749.18Uncharacterized protein OS=Cucumis sativus GN=Csa_3G875990 PE=4 SV=1[more]
A0A067F358_CITSI1.1e-2447.15Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040068mg PE=4 SV=1[more]
V4UMI7_9ROSI6.8e-2446.34Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009917mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G32110.17.0e-1231.09 Beta-1,3-N-Acetylglucosaminyltransferase family protein[more]
AT4G32105.17.0e-1230.25 Beta-1,3-N-Acetylglucosaminyltransferase family protein[more]
AT4G32100.18.0e-0827.27 Beta-1,3-N-Acetylglucosaminyltransferase family protein[more]
Match NameE-valueIdentityDescription
gi|659080150|ref|XP_008440637.1|1.0e-4472.95PREDICTED: uncharacterized protein LOC103484995 [Cucumis melo][more]
gi|700193567|gb|KGN48771.1|8.5e-4473.50hypothetical protein Csa_6G500630 [Cucumis sativus][more]
gi|700204940|gb|KGN60073.1|3.5e-2951.64hypothetical protein Csa_3G875970 [Cucumis sativus][more]
gi|700204942|gb|KGN60075.1|9.4e-2749.18hypothetical protein Csa_3G875990 [Cucumis sativus][more]
gi|659133309|ref|XP_008466664.1|1.8e-2552.94PREDICTED: uncharacterized protein LOC103504019 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016740 transferase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G005250.1CmoCh07G005250.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33184FAMILY NOT NAMEDcoord: 1..122
score: 1.4
NoneNo IPR availablePANTHERPTHR33184:SF11BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEINcoord: 1..122
score: 1.4