MELO3C025116 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025116
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Myb family transcription factor family protein
Location	chr9 : 13959858 .. 13960628 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTAATATTCAAAGGGTTATAAATATTGAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACTCCATTTCTTGATCTTTCTCTTCAAATTAGTCCACCCAACAGTATTATTAATCATTCTACCTTCCCTACTAATACTATTGAAACCTCTAATGGATCAACTAACCAATTGTTTACTCATCATTACACTAATAAATCACTCAATCAAATTAATAATGGGGTTTCCCTTGATCATCATCATGCTTGCCCGATCAATGGCTTCCCAATTCATCCCAACCCTTCAATTTTCTACCCTAAACAAAGGCTTACTTCTCCTGCATTCTCTGGGGCCTCTTCATCTTCTTCAATCTCTACTTTCACTTTGCCGCCGCCGTATCTCCACTACCACTTGGACTCTGATCGATTGTCGGCTGTGGCGAGAGGACGATCCATGAGGGCACCGAGAATGCGGTGGACGAGCAGCCTCCACGCTCAGTTTGTTCATGCTGTAGAGCTTCTTGGCGGACATGAAAGTAAAATTAATATTTTTTTTCAATTGTATTTATTTATATTTTGCTCTTTATTCTTTATAATTTGATTAAGTAATGTTGTGTTTGTTTAAGGAGCTACGCCTAAATCCGTTCTAGAGCTCATGGATGTGAAGGATCTAACATTGGCTCACGTCAAAAGCCATTTACAGGTTTTTTTCTTCTCTTTTTTCTTTTTTCATATAATTTTTAATTTTTATATTAAGTTCAAATTATTAATGTACAAATGA

mRNA sequence

ATGCCTAATATTCAAAGGGTTATAAATATTGAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACTCCATTTCTTGATCTTTCTCTTCAAATTAGTCCACCCAACAGTATTATTAATCATTCTACCTTCCCTACTAATACTATTGAAACCTCTAATGGATCAACTAACCAATTGTTTACTCATCATTACACTAATAAATCACTCAATCAAATTAATAATGGGGTTTCCCTTGATCATCATCATGCTTGCCCGATCAATGGCTTCCCAATTCATCCCAACCCTTCAATTTTCTACCCTAAACAAAGGCTTACTTCTCCTGCATTCTCTGGGGCCTCTTCATCTTCTTCAATCTCTACTTTCACTTTGCCGCCGCCGTATCTCCACTACCACTTGGACTCTGATCGATTGTCGGCTGTGGCGAGAGGACGATCCATGAGGGCACCGAGAATGCGGTGGACGAGCAGCCTCCACGCTCAGTTTGTTCATGCTGTAGAGCTTCTTGGCGGACATGAAAGAGCTACGCCTAAATCCGTTCTAGAGCTCATGGATGTGAAGGATCTAACATTGGCTCACGTCAAAAGCCATTTACAGGTTTTTTTCTTCTCTTTTTTCTTTTTTCATATAATTTTTAATTTTTATATTAAGTTCAAATTATTAATGTACAAATGA

Coding sequence (CDS)

ATGCCTAATATTCAAAGGGTTATAAATATTGAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACTCCATTTCTTGATCTTTCTCTTCAAATTAGTCCACCCAACAGTATTATTAATCATTCTACCTTCCCTACTAATACTATTGAAACCTCTAATGGATCAACTAACCAATTGTTTACTCATCATTACACTAATAAATCACTCAATCAAATTAATAATGGGGTTTCCCTTGATCATCATCATGCTTGCCCGATCAATGGCTTCCCAATTCATCCCAACCCTTCAATTTTCTACCCTAAACAAAGGCTTACTTCTCCTGCATTCTCTGGGGCCTCTTCATCTTCTTCAATCTCTACTTTCACTTTGCCGCCGCCGTATCTCCACTACCACTTGGACTCTGATCGATTGTCGGCTGTGGCGAGAGGACGATCCATGAGGGCACCGAGAATGCGGTGGACGAGCAGCCTCCACGCTCAGTTTGTTCATGCTGTAGAGCTTCTTGGCGGACATGAAAGAGCTACGCCTAAATCCGTTCTAGAGCTCATGGATGTGAAGGATCTAACATTGGCTCACGTCAAAAGCCATTTACAGGTTTTTTTCTTCTCTTTTTTCTTTTTTCATATAATTTTTAATTTTTATATTAAGTTCAAATTATTAATGTACAAATGA

Protein sequence

MPNIQRVINIESSSSSSSSSSSSSSTPFLDLSLQISPPNSIINHSTFPTNTIETSNGSTNQLFTHHYTNKSLNQINNGVSLDHHHACPINGFPIHPNPSIFYPKQRLTSPAFSGASSSSSISTFTLPPPYLHYHLDSDRLSAVARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQVFFFSFFFFHIIFNFYIKFKLLMYK*

Homology

[Close]

BLAST of MELO3C025116 vs. Swiss-Prot
Match: KAN2_ARATH (Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.3e-33
Identity = 93/222 (41.89%), Postives = 125/222 (56.31%), Query Frame = 1


Query: 5   QRVINIESSSSSSSSSSSSSSTPFLDLSL---------------QISP---PNSIINHST 64
           +R ++  +SS  S+S+S + + PF DLSL               Q+ P    ++I+    
Sbjct: 46  RRALDSRTSSLVSNSTSKTINHPFQDLSLSNISHHQQQQQHHHPQLLPNCNSSNILTSFQ 105

Query: 65  FPTNTIET--SNGSTNQLFTHHYTNKSLNQINNGVSLDHHHACPINGFPIHPNPSIFYPK 124
           FPT   +        + L TH    + +   +N     H H  P   FP   +PS   P 
Sbjct: 106 FPTQQQQQHLQGFLAHDLNTHLRPIRGIPLYHNPPPHHHPHRPPPPCFPF--DPSSLIPS 165

Query: 125 QRLTSPAFSGASSSSSISTFTLPPPYLHYHLDSDRLSAVAR---GRSMRAPRMRWTSSLH 184
              +SPA +G ++S + S+ + P  + H+H   +R   + R    RSMRAPRMRWT++LH
Sbjct: 166 SSTSSPALTGNNNSFNTSSVSNPNYHNHHHQTLNRARFMPRFPAKRSMRAPRMRWTTTLH 225

Query: 185 AQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQVF 204
           A+FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ++
Sbjct: 226 ARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 265

[Close]

BLAST of MELO3C025116 vs. Swiss-Prot
Match: KAN1_ARATH (Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-25
Identity = 64/93 (68.82%), Postives = 70/93 (75.27%), Query Frame = 1


Query: 114 GASSSSSISTFTLPPPYLHYH---LDSDRLSAVARGRSMRAPRMRWTSSLHAQFVHAVEL 173
           G+S SSS      P  + H+H   + S  L  +   RSMRAPRMRWTSSLHA+FVHAVEL
Sbjct: 185 GSSDSSS------PHHHNHHHHGMIRSRFLPKMPTKRSMRAPRMRWTSSLHARFVHAVEL 244

Query: 174 LGGHERATPKSVLELMDVKDLTLAHVKSHLQVF 204
           LGGHERATPKSVLELMDVKDLTLAHVKSHLQ++
Sbjct: 245 LGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 271

[Close]

BLAST of MELO3C025116 vs. Swiss-Prot
Match: ROLL9_ORYSJ (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica GN=RL9 PE=2 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 8.2e-24
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 1


Query: 147 RSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQVF 204
           RSMRAPRMRWTS+LHA+FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ++
Sbjct: 320 RSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 376

[Close]

BLAST of MELO3C025116 vs. Swiss-Prot
Match: KAN3_ARATH (Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-23
Identity = 65/159 (40.88%), Postives = 88/159 (55.35%), Query Frame = 1


Query: 54  TSNGSTNQLFTHHYTNKSLNQINNGVSLDHHHACPINGFPIHPNPSI--FYPKQRLTSPA 113
           TSN    ++ ++    +SL+Q    + +      PI G P++ N  +  +Y      +P 
Sbjct: 62  TSNNEATKINSNQEHKESLDQDLRSIFMMR----PIRGIPLYQNQVLDHYYYSSTSPNPF 121

Query: 114 FSGASSSSSISTFTLPPPYLHYHLDSDRLSAV-------ARGRSMRAPRMRWTSSLHAQF 173
           F    +    S   +  P   ++L +                R +RAPRMRWT++LHA F
Sbjct: 122 FFSEVNGQHASRRLITNPNCSFNLHNRHRRQAQPQPPRFTAKRGVRAPRMRWTTTLHAHF 181

Query: 174 VHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQVF 204
           VHAV+LLGGHERATPKSVLELMDV+DLTLAHVKSHLQ++
Sbjct: 182 VHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMY 216

[Close]

BLAST of MELO3C025116 vs. Swiss-Prot
Match: KAN4_ARATH (Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-22
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 1


Query: 141 SAVARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 200
           S V   RS+RAPRMRWTS+LHA FVHAV+LLGGHERATPKSVLELM+VKDLTLAHVKSHL
Sbjct: 95  SMVGLKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHL 154

Query: 201 QVF 204
           Q++
Sbjct: 155 QMY 157

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BLAST of MELO3C025116 vs. TrEMBL
Match: D7KHH9_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473414 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-32
Identity = 91/219 (41.55%), Postives = 124/219 (56.62%), Query Frame = 1


Query: 5   QRVINIESSSSSSSSSSSSSSTPFLDLSLQISPPNSIINHSTFPTNTIETSNGSTNQLFT 64
           +R ++  +SS  S+SSS + + PF DLSL  +  +    H       +   NGS      
Sbjct: 46  RRALDSRTSSLVSNSSSKTINHPFQDLSLSNNSHHQQQQHHHHHPQLLPNCNGSNILTSF 105

Query: 65  HHYTNKSLNQINNGVSLD-HHHACPINGFPIHPNP----------------SIFYPKQRL 124
              T +    +   ++ D + H  PI G P++ NP                S   P    
Sbjct: 106 QFPTQQQQQHLQGFLARDLNTHLRPIRGIPLYHNPPPHHHRPPPPCFPFDPSSLIPSSSS 165

Query: 125 TSPAFSGASSSSSISTFTLPPPYLHYHLDSDRLSAVAR---GRSMRAPRMRWTSSLHAQF 184
           +SPA +G ++S + S+ + P  + H+H   +R   + R    RSMRAPRMRWT++LHA+F
Sbjct: 166 SSPALTGNNNSFNTSSVSNPNYHNHHHQTLNRARFMPRFPAKRSMRAPRMRWTTTLHARF 225

Query: 185 VHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQVF 204
           VHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ++
Sbjct: 226 VHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 264

[Close]

BLAST of MELO3C025116 vs. TrEMBL
Match: F6HT56_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g01940 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.9e-30
Identity = 87/202 (43.07%), Postives = 119/202 (58.91%), Query Frame = 1


Query: 17  SSSSSSSSSTPFLDLSLQISPPNSIINHSTFPTNTIETSNGSTNQL-------FTHHYTN 76
           S +S SS + P     L +S P +  + S    +     NG+TN L       + HH+ +
Sbjct: 43  SRNSISSMTKPDSCFELSLSNPRAT-SESNNSNHFHLLQNGNTNLLHSFQQSQYPHHHHH 102

Query: 77  K-----SLNQINNGVSLDHHHACPINGFPIHPNPSIFYPKQRLTSPAFSGASSSSSISTF 136
           +      L Q   G S +     PI G P++ NP  F   Q+    + + ++++++ +T 
Sbjct: 103 QHQLHHQLFQQQQGFSQELGFLRPIRGIPVYQNPPSFPFAQQPLDSSIASSTTTNTAATT 162

Query: 137 TLPPPYLHYH---LDSDRLSAVARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKS 196
           T   P+  +H   + S  LS     RSMRAPRMRWT++LHA+FVHAVELLGGHERATPKS
Sbjct: 163 TGSSPFQSHHQGLIRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKS 222

Query: 197 VLELMDVKDLTLAHVKSHLQVF 204
           VLELMDVKDLTLAHVKSHLQ++
Sbjct: 223 VLELMDVKDLTLAHVKSHLQMY 243

[Close]

BLAST of MELO3C025116 vs. TrEMBL
Match: W9RDS4_9ROSA (Putative transcription factor KAN2 OS=Morus notabilis GN=L484_017742 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29
Identity = 98/243 (40.33%), Postives = 131/243 (53.91%), Query Frame = 1


Query: 9   NIESSSSSSSSSSSSSSTPFLDLSLQISPPNSII----NH-------------------- 68
           N+ +SS++++S+ + +S  F DLSL  S  NS +    NH                    
Sbjct: 68  NMITSSTNNNSNMNMNSNCF-DLSLSNSNNNSTLLSHHNHNHHHHHQYHHQQHLQNGNGN 127

Query: 69  STFPTNTIETSNGSTNQLFTHHYTNKSLN-----QINNGVSLDHHHACPINGFPIHPNPS 128
           S F  +T  T     NQL+THH+ +   N     Q   G+S +     PI G P++ NP 
Sbjct: 128 SLFHNSTSTTPFPHQNQLYTHHHHHHHQNAAFHHQQQQGLSQELGFLRPIRGIPVYQNPP 187

Query: 129 I----FYPKQRLTSPAFSGASSSSSISTFTL----PPPYLHYH-----------LDSDRL 188
                F P  ++   A + A+++S  S+         P+  +H           + S  L
Sbjct: 188 SSPFPFSPAAQVLDTAAAAAAANSLSSSLANGAAGSSPFQSHHGHHHHQQQAGLMRSRFL 247

Query: 189 SAVARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 204
           S     RSMRAPRMRWT++LHA+FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL
Sbjct: 248 SRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 307

[Close]

BLAST of MELO3C025116 vs. TrEMBL
Match: A0A067KUB8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10837 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.0e-28
Identity = 93/220 (42.27%), Postives = 120/220 (54.55%), Query Frame = 1


Query: 13  SSSSSSSSSSSSSTPFLDLSL---QISPPNSIINHSTFPTNTIETSNGST--------NQ 72
           S ++S SS +       +LSL   ++S  NS  NH     NT   ++ +         NQ
Sbjct: 43  SRNTSMSSMAKPDNSCFELSLSNPRVSESNSN-NHFHLLQNTTNYNSSNNLFHSFQQNNQ 102

Query: 73  LFTHHYTNKSLNQINN-------GVSLDHHHACPINGFPIHPNPSIF----------YPK 132
            + HH+  +   Q  N       G+S D     PI G P++ NP             +P 
Sbjct: 103 FYPHHHLFQQQQQQQNQQQQQQQGLSQDLGFLRPIRGIPVYQNPPTLSTTPAFPFPQHPL 162

Query: 133 QRLTSPAFSGASSSSSISTFTLPPPYLHYHLDSDRL-SAVARGRSMRAPRMRWTSSLHAQ 192
              TS   +  S+S+S+S      P+   +L   RL S     RSMRAPRMRWT++LHA+
Sbjct: 163 DNTTSCLATNNSNSTSLS------PFQSQNLMRSRLMSRFPAKRSMRAPRMRWTTTLHAR 222

Query: 193 FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQVF 204
           FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ++
Sbjct: 223 FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 255

[Close]

BLAST of MELO3C025116 vs. TrEMBL
Match: K4CI17_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.9e-28
Identity = 85/181 (46.96%), Postives = 107/181 (59.12%), Query Frame = 1


Query: 29  LDLSLQISPPNSIINHST--FPTNTIETSNGS--TNQLFTHHYTNKSLNQINNGVSL--D 88
           L LS  I  P+SI+NH    +P++    +N +   N    HH+ N  L    +GV L  +
Sbjct: 55  LSLSSNIPRPSSILNHQDPKYPSSQYFQNNTNFINNPFIPHHHHNLGLFSPISGVPLYNN 114

Query: 89  HHHACPINGFPIHPNPSIFYPKQRLTSPAFSGASSSSSISTFTLPPPYLHYHLDSDRLSA 148
           H ++   N  PI  +P+ F     +          SSS S F     + +  + S   S 
Sbjct: 115 HQNSSTNNTLPIQSSPTSFNNYNNINP-------ISSSNSHFHQSHNHQNGLMRSRFFSR 174

Query: 149 VARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQV 204
               RSMRAPRMRWTS+LHA+FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ+
Sbjct: 175 FPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM 228

[Close]

BLAST of MELO3C025116 vs. TAIR10
Match: AT1G32240.1 (AT1G32240.1 Homeodomain-like superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 2.4e-34
Identity = 93/222 (41.89%), Postives = 125/222 (56.31%), Query Frame = 1


Query: 5   QRVINIESSSSSSSSSSSSSSTPFLDLSL---------------QISP---PNSIINHST 64
           +R ++  +SS  S+S+S + + PF DLSL               Q+ P    ++I+    
Sbjct: 46  RRALDSRTSSLVSNSTSKTINHPFQDLSLSNISHHQQQQQHHHPQLLPNCNSSNILTSFQ 105

Query: 65  FPTNTIET--SNGSTNQLFTHHYTNKSLNQINNGVSLDHHHACPINGFPIHPNPSIFYPK 124
           FPT   +        + L TH    + +   +N     H H  P   FP   +PS   P 
Sbjct: 106 FPTQQQQQHLQGFLAHDLNTHLRPIRGIPLYHNPPPHHHPHRPPPPCFPF--DPSSLIPS 165

Query: 125 QRLTSPAFSGASSSSSISTFTLPPPYLHYHLDSDRLSAVAR---GRSMRAPRMRWTSSLH 184
              +SPA +G ++S + S+ + P  + H+H   +R   + R    RSMRAPRMRWT++LH
Sbjct: 166 SSTSSPALTGNNNSFNTSSVSNPNYHNHHHQTLNRARFMPRFPAKRSMRAPRMRWTTTLH 225

Query: 185 AQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQVF 204
           A+FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ++
Sbjct: 226 ARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 265

[Close]

BLAST of MELO3C025116 vs. TAIR10
Match: AT5G16560.1 (AT5G16560.1 Homeodomain-like superfamily protein)

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-26
Identity = 64/93 (68.82%), Postives = 70/93 (75.27%), Query Frame = 1


Query: 114 GASSSSSISTFTLPPPYLHYH---LDSDRLSAVARGRSMRAPRMRWTSSLHAQFVHAVEL 173
           G+S SSS      P  + H+H   + S  L  +   RSMRAPRMRWTSSLHA+FVHAVEL
Sbjct: 185 GSSDSSS------PHHHNHHHHGMIRSRFLPKMPTKRSMRAPRMRWTSSLHARFVHAVEL 244

Query: 174 LGGHERATPKSVLELMDVKDLTLAHVKSHLQVF 204
           LGGHERATPKSVLELMDVKDLTLAHVKSHLQ++
Sbjct: 245 LGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 271

[Close]

BLAST of MELO3C025116 vs. TAIR10
Match: AT4G17695.1 (AT4G17695.1 Homeodomain-like superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 7.8e-25
Identity = 65/159 (40.88%), Postives = 88/159 (55.35%), Query Frame = 1


Query: 54  TSNGSTNQLFTHHYTNKSLNQINNGVSLDHHHACPINGFPIHPNPSI--FYPKQRLTSPA 113
           TSN    ++ ++    +SL+Q    + +      PI G P++ N  +  +Y      +P 
Sbjct: 62  TSNNEATKINSNQEHKESLDQDLRSIFMMR----PIRGIPLYQNQVLDHYYYSSTSPNPF 121

Query: 114 FSGASSSSSISTFTLPPPYLHYHLDSDRLSAV-------ARGRSMRAPRMRWTSSLHAQF 173
           F    +    S   +  P   ++L +                R +RAPRMRWT++LHA F
Sbjct: 122 FFSEVNGQHASRRLITNPNCSFNLHNRHRRQAQPQPPRFTAKRGVRAPRMRWTTTLHAHF 181

Query: 174 VHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQVF 204
           VHAV+LLGGHERATPKSVLELMDV+DLTLAHVKSHLQ++
Sbjct: 182 VHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMY 216

[Close]

BLAST of MELO3C025116 vs. TAIR10
Match: AT5G42630.1 (AT5G42630.1 Homeodomain-like superfamily protein)

HSP 1 Score: 108.2 bits (269), Expect = 6.6e-24
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 1


Query: 141 SAVARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHL 200
           S V   RS+RAPRMRWTS+LHA FVHAV+LLGGHERATPKSVLELM+VKDLTLAHVKSHL
Sbjct: 95  SMVGLKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHL 154

Query: 201 QVF 204
           Q++
Sbjct: 155 QMY 157

[Close]

BLAST of MELO3C025116 vs. TAIR10
Match: AT2G02060.1 (AT2G02060.1 Homeodomain-like superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 8.7e-16
Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 1


Query: 152 PRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQVF 204
           PR+RWT  LH  FVHAVE+LGG  RATPK VL++MDVK LT++HVKSHLQ++
Sbjct: 30  PRLRWTPDLHRCFVHAVEILGGQHRATPKLVLKMMDVKGLTISHVKSHLQMY 81

[Close]

BLAST of MELO3C025116 vs. NCBI nr
Match: gi|659126425|ref|XP_008463176.1| (PREDICTED: probable transcription factor KAN2 [Cucumis melo])

HSP 1 Score: 409.5 bits (1051), Expect = 3.9e-111
Identity = 202/203 (99.51%), Postives = 203/203 (100.00%), Query Frame = 1


Query: 1   MPNIQRVINIESSSSSSSSSSSSSSTPFLDLSLQISPPNSIINHSTFPTNTIETSNGSTN 60
           MPNIQRVINIESSSSSSSSSSSSSSTPFLDLSLQISPPNSIINHSTFPTNTIETSNGSTN
Sbjct: 1   MPNIQRVINIESSSSSSSSSSSSSSTPFLDLSLQISPPNSIINHSTFPTNTIETSNGSTN 60

Query: 61  QLFTHHYTNKSLNQINNGVSLDHHHACPINGFPIHPNPSIFYPKQRLTSPAFSGASSSSS 120
           QLFTHHYTNKSLNQINNGVSLDHHHACPINGFPIHPNPSIFYPKQRLTSPAFSGASSSSS
Sbjct: 61  QLFTHHYTNKSLNQINNGVSLDHHHACPINGFPIHPNPSIFYPKQRLTSPAFSGASSSSS 120

Query: 121 ISTFTLPPPYLHYHLDSDRLSAVARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPK 180
           ISTFTLPPPYLHYHLDSDRLSAVARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPK
Sbjct: 121 ISTFTLPPPYLHYHLDSDRLSAVARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPK 180

Query: 181 SVLELMDVKDLTLAHVKSHLQVF 204
           SVLELMDVKDLTLAHVKSHLQ+F
Sbjct: 181 SVLELMDVKDLTLAHVKSHLQMF 203

[Close]

BLAST of MELO3C025116 vs. NCBI nr
Match: gi|297851664|ref|XP_002893713.1| (hypothetical protein ARALYDRAFT_473414 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 148.3 bits (373), Expect = 1.6e-32
Identity = 91/219 (41.55%), Postives = 124/219 (56.62%), Query Frame = 1


Query: 5   QRVINIESSSSSSSSSSSSSSTPFLDLSLQISPPNSIINHSTFPTNTIETSNGSTNQLFT 64
           +R ++  +SS  S+SSS + + PF DLSL  +  +    H       +   NGS      
Sbjct: 46  RRALDSRTSSLVSNSSSKTINHPFQDLSLSNNSHHQQQQHHHHHPQLLPNCNGSNILTSF 105

Query: 65  HHYTNKSLNQINNGVSLD-HHHACPINGFPIHPNP----------------SIFYPKQRL 124
              T +    +   ++ D + H  PI G P++ NP                S   P    
Sbjct: 106 QFPTQQQQQHLQGFLARDLNTHLRPIRGIPLYHNPPPHHHRPPPPCFPFDPSSLIPSSSS 165

Query: 125 TSPAFSGASSSSSISTFTLPPPYLHYHLDSDRLSAVAR---GRSMRAPRMRWTSSLHAQF 184
           +SPA +G ++S + S+ + P  + H+H   +R   + R    RSMRAPRMRWT++LHA+F
Sbjct: 166 SSPALTGNNNSFNTSSVSNPNYHNHHHQTLNRARFMPRFPAKRSMRAPRMRWTTTLHARF 225

Query: 185 VHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQVF 204
           VHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ++
Sbjct: 226 VHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 264

[Close]

BLAST of MELO3C025116 vs. NCBI nr
Match: gi|297742050|emb|CBI33837.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 146.0 bits (367), Expect = 8.1e-32
Identity = 94/204 (46.08%), Postives = 122/204 (59.80%), Query Frame = 1


Query: 30  DLSLQISPPNSIINHSTF------PTNTIETSN---------GSTNQL-------FTHHY 89
           DLSLQISPPNS    S F      P  T E++N         G+TN L       + HH+
Sbjct: 9   DLSLQISPPNS--KPSCFELSLSNPRATSESNNSNHFHLLQNGNTNLLHSFQQSQYPHHH 68

Query: 90  TNK-----SLNQINNGVSLDHHHACPINGFPIHPNPSIFYPKQRLTSPAFSGASSSSSIS 149
            ++      L Q   G S +     PI G P++ NP  F   Q+    + + ++++++ +
Sbjct: 69  HHQHQLHHQLFQQQQGFSQELGFLRPIRGIPVYQNPPSFPFAQQPLDSSIASSTTTNTAA 128

Query: 150 TFTLPPPYLHYH---LDSDRLSAVARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATP 204
           T T   P+  +H   + S  LS     RSMRAPRMRWT++LHA+FVHAVELLGGHERATP
Sbjct: 129 TTTGSSPFQSHHQGLIRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATP 188

[Close]

BLAST of MELO3C025116 vs. NCBI nr
Match: gi|18398337|ref|NP_564392.1| (probable transcription factor KAN2 [Arabidopsis thaliana])

HSP 1 Score: 142.9 bits (359), Expect = 6.9e-31
Identity = 93/222 (41.89%), Postives = 127/222 (57.21%), Query Frame = 1


Query: 5   QRVINIESSSSSSSSSSSSSSTPFLDLSL---------------QISP---PNSIINHST 64
           +R ++  +SS  S+S+S + + PF DLSL               Q+ P    ++I+    
Sbjct: 46  RRALDSRTSSLVSNSTSKTINHPFQDLSLSNISHHQQQQQHHHPQLLPNCNSSNILTSFQ 105

Query: 65  FPTNTIET--SNGSTNQLFTHHYTNKSLNQINNGVSLDHHHACPINGFPIHPNPSIFYPK 124
           FPT   +        + L TH    + +   +N     H H  P   FP   +PS   P 
Sbjct: 106 FPTQQQQQHLQGFLAHDLNTHLRPIRGIPLYHNPPPHHHPHRPPPPCFPF--DPSSLIPS 165

Query: 125 QRLTSPAFSGASSSSSISTFTLPPPYLHYHLDSDRLSAVAR---GRSMRAPRMRWTSSLH 184
              +SPA +G ++S + S+ + P  + H+H   +R   + R    RSMRAPRMRWT++LH
Sbjct: 166 SSTSSPALTGNNNSFNTSSVSNPNYHNHHHQTLNRARFMPRFPAKRSMRAPRMRWTTTLH 225

Query: 185 AQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQVF 204
           A+FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ++
Sbjct: 226 ARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 265

[Close]

BLAST of MELO3C025116 vs. NCBI nr
Match: gi|727576759|ref|XP_010461043.1| (PREDICTED: probable transcription factor KAN2 [Camelina sativa])

HSP 1 Score: 139.4 bits (350), Expect = 7.6e-30
Identity = 98/231 (42.42%), Postives = 126/231 (54.55%), Query Frame = 1


Query: 5   QRVINIESSSSSSSSSSSSSSTPFLDLSLQISPPNSIINHSTFPTNTIETSNGSTN---- 64
           +R ++  +S+  S+SSS  ++ PF DLSL  +  +    H     + +   NGS      
Sbjct: 46  RRALDSRTSTLVSNSSSKPTNHPFQDLSLSNNSHHQQQQHQHHQPHLVPNCNGSNILTSF 105

Query: 65  -----------QLFTHHYTNKSLNQINNGVSL------DHHHACPINGFPIHPNPSIFYP 124
                      Q F  H  N  L  I  G+ L       HHH  P   FP   +PS   P
Sbjct: 106 QFPTQQQQQHLQGFLAHDLNTHLRPIR-GIPLYHNPPPHHHHRQPPPCFPF--DPSSLIP 165

Query: 125 KQRLTSPAFSGASSS---SSIST---FTLPPPYLHYH----LDSDR-LSAVARGRSMRAP 184
               + P+ +G ++S   SS+S     T P  Y H+H    L+  R +      RSMRAP
Sbjct: 166 SSSPSPPSLTGNNNSFNTSSVSNSGLITNPNYYNHHHHHQTLNRARFMPRFPAKRSMRAP 225

Query: 185 RMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQVF 204
           RMRWT++LHA+FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ++
Sbjct: 226 RMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 273

The following BLAST results are available for this feature:

BLAST of MELO3C025116 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KAN2_ARATH	4.3e-33	41.89	Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1	[more]
KAN1_ARATH	2.5e-25	68.82	Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1 SV=1	[more]
ROLL9_ORYSJ	8.2e-24	92.98	Probable transcription factor RL9 OS=Oryza sativa subsp. japonica GN=RL9 PE=2 SV...	[more]
KAN3_ARATH	1.4e-23	40.88	Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3 PE=2 SV=1	[more]
KAN4_ARATH	1.2e-22	82.54	Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4 PE=1 SV=1	[more]

BLAST of MELO3C025116 vs. TrEMBL


Match Name	E-value	Identity	Description
D7KHH9_ARALL	1.1e-32	41.55	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]
F6HT56_VITVI	6.9e-30	43.07	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g01940 PE=4 SV=...	[more]
W9RDS4_9ROSA	1.5e-29	40.33	Putative transcription factor KAN2 OS=Morus notabilis GN=L484_017742 PE=4 SV=1	[more]
A0A067KUB8_JATCU	1.0e-28	42.27	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10837 PE=4 SV=1	[more]
K4CI17_SOLLC	2.9e-28	46.96	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of MELO3C025116 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32240.1	2.4e-34	41.89	Homeodomain-like superfamily protein	[more]
AT5G16560.1	1.4e-26	68.82	Homeodomain-like superfamily protein	[more]
AT4G17695.1	7.8e-25	40.88	Homeodomain-like superfamily protein	[more]
AT5G42630.1	6.6e-24	82.54	Homeodomain-like superfamily protein	[more]
AT2G02060.1	8.7e-16	69.23	Homeodomain-like superfamily protein	[more]

BLAST of MELO3C025116 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126425\|ref\|XP_008463176.1\|	3.9e-111	99.51	PREDICTED: probable transcription factor KAN2 [Cucumis melo]	[more]
gi\|297851664\|ref\|XP_002893713.1\|	1.6e-32	41.55	hypothetical protein ARALYDRAFT_473414 [Arabidopsis lyrata subsp. lyrata]	[more]
gi\|297742050\|emb\|CBI33837.3\|	8.1e-32	46.08	unnamed protein product [Vitis vinifera]	[more]
gi\|18398337\|ref\|NP_564392.1\|	6.9e-31	41.89	probable transcription factor KAN2 [Arabidopsis thaliana]	[more]
gi\|727576759\|ref\|XP_010461043.1\|	7.6e-30	42.42	PREDICTED: probable transcription factor KAN2 [Camelina sativa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009845	seed germination
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0009887	animal organ morphogenesis
biological_process	GO:0048481	plant ovule development
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:0009956	radial pattern formation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010051	xylem and phloem pattern formation
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0010162	seed dormancy process
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000785	chromatin
cellular_component	GO:0009536	plastid
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025116T1	MELO3C025116T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 153..201 score: 5.
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 152..204 score: 9.9
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 150..203 score: 1.4
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 149..205 score: 6.45
None	No IPR available	PANTHER	PTHR31496	FAMILY NOT NAMED	coord: 109..201 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025116	Csa5G429440	Cucumber (Chinese Long) v2	cumeB353
MELO3C025116	Cla009148	Watermelon (97103) v1	mewmB034
MELO3C025116	ClCG01G008730	Watermelon (Charleston Gray)	mewcgB020
MELO3C025116	Cla97C01G008960	Watermelon (97103) v2	mewmbB010
MELO3C025116	Bhi12G001052	Wax gourd	mewgoB015
MELO3C025116	CSPI05G15270	Wild cucumber (PI 183967)	cpimeB343
MELO3C025116	CmaCh15G007530	Cucurbita maxima (Rimu)	cmameB252
MELO3C025116	CmaCh04G022830	Cucurbita maxima (Rimu)	cmameB636
MELO3C025116	CmoCh04G023860	Cucurbita moschata (Rifu)	cmomeB626
MELO3C025116	CmoCh15G007780	Cucurbita moschata (Rifu)	cmomeB240
MELO3C025116	Lsi09G009120	Bottle gourd (USVL1VR-Ls)	lsimeB014
MELO3C025116	Cp4.1LG01g19850	Cucurbita pepo (Zucchini)	cpemeB360
MELO3C025116	CsGy5G015080	Cucumber (Gy14) v2	cgybmeB294
MELO3C025116	Carg01453	Silver-seed gourd	carmeB0822
MELO3C025116	Carg18279	Silver-seed gourd	carmeB0531
MELO3C025116	CsaV3_5G024310	Cucumber (Chinese Long) v3	cucmeB351

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025116	Cucumber (Gy14) v1	cgymeB450