Cla009148 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla009148
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Myb family transcription factor-like (AHRD V1 *- Q84NK2_ORYSJ); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF class
Location	Chr1 : 23283887 .. 23285680 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACTTCTCCTACTTTCTTCTCCTCCTCCTCCTCCTCTTCAATCTCGTACTCGAAAATCTCTACTTTCACTTCACCACCACCGTATCTCCATTACCAGTTGGACTCTGGTCGGTCGTCGACGGTGGCAAGAGGACGATCCATGAGGGCGCCGAGAATGCGGTGGACGAGCAGCCTCCACTCTCAGTTTGTTCATGCTGTTGAGCTTCTTGGCGGCCATGAAAGTAATACTTTGAAGTTTCATTCTCATTTTTTATTTTTTATTTTTTTATTTTGTATTTATTTTCCCTTTCTTCTTTCTAATTTTCTTTAATCATCATGTTGTGTTGTTATAAGGAGCTACGCCTAAATCAGTTCTAGAGCTCATGGATGTGAAGGATCTAACACTGGCTCACGTGAAAAGCCATTTACAGGTTTTTGTTTTAAATCCTTTTTAATTTAGAATATTAAATTCAAATTAAATCTACCATTCGCAAATCGTTAAACTATGCTAAGTTTGACATATAACAAATAATTGGTATTTCATGATGCAAGTTTCACAACTAAATGAATGCATATAATAAATGCATGTACCTTCTCACACAGTAAACCCTAACTCACAAAGAGAGAGAAAACCATCATAAATTTAATTTAACTAATTATTATTTTCTTTTTACTGTTTTTCCAACTTTATTTTTCAAATTACGAAACGAACAGAGCGAAGAAGATGAGCCATTATTAATATTTCAATTCGTCTTATGTTAAGAAAATTATATAAAAGTATTAACATAGTCCTATTTCATTTTATTTTTATTTTTGAAAATTAAATTTTTATTTTCTTGCTTTATTATCTACTTTTTATTTTTTTTTAAAAAAAAAATTAAGCTAAATTTTGAAAATTAAGACTTCGATAACTATTTAGTTTTTGATTTTTTATATATAAAAATTAAATCTATAGACATTACTTTCACCATCAATTTTCTTCTTTTGTGATTTACTTCTTACCAATGGTTTAAAAAGCCAAGTCAAAATTTTGAAAACTAAAAAAAGTAGCTTTTAGGCTCCATCTTGTAACCATTTTGTTTTTTAAAATTAAGCCTATAGACACTACTTTTTATCTTCAAATTTATTTCTTTGTTATCTACTTTTTACTAATAGTTTAAAAAACCAAGCCAAAATTTGAAAACTAAAAAAAATAGTTTTTAAAAACTTGGATTTGTTTTTGGAATTTGGCAAAGAATTCAACTATTATAATGCAAATCAATGTAAAAAATAGGAAAAAATAGACTTCATTTAAAAAAAAAAAAAAACAAAAATCAAAATGGTTACCAAACGAGGCCTTAAAAGCTTGTTTTTGTTTTTGAAATTTGGCTAAGAATTCAACAACTATATTTTAGTAAGATGCCAATTATCGTAAGAAATGGAGACTTGAAATATATGCATAATAAGAGTAAAAAGAAAACATGAAATCATCATAATCATAACATAGAAAAGTTTCTACATGAAAATTATGATACTACTTTTACATTTTGAATCCTTAACCTCTCTCTCTTTTTACTTAAGAGCACTTTCTACATGTTAATTATAATCATGCTTTAACATTTTGAATCCTTAACCTCTCTCTTTAATAATTTTCAGCTTTTATAAGCTAAGAAAAGCAAATGAGTAACTCACCAATATATTTTATAATAATAATAATAATTATTATTATTATTATTGTTGTTTATTTATTTATTCTTGTGAATGACTTTTATTGCAGATGTTTCGGGCTCATAAGACGACCGACAAGCCTGCAGCTTCTCCAGGTAATTAA

mRNA sequence

ATGTCTACTTCTCCTACTTTCTTCTCCTCCTCCTCCTCCTCTTCAATCTCGTACTCGAAAATCTCTACTTTCACTTCACCACCACCGTATCTCCATTACCAGTTGGACTCTGGTCGGTCGTCGACGGTGGCAAGAGGACGATCCATGAGGGCGCCGAGAATGCGGTGGACGAGCAGCCTCCACTCTCAGTTTGTTCATGCTGTTGAGCTTCTTGGCGGCCATGAAAGAGCTACGCCTAAATCAGTTCTAGAGCTCATGGATGTGAAGGATCTAACACTGGCTCACGTGAAAAGCCATTTACAGATGTTTCGGGCTCATAAGACGACCGACAAGCCTGCAGCTTCTCCAGGTAATTAA

Coding sequence (CDS)

ATGTCTACTTCTCCTACTTTCTTCTCCTCCTCCTCCTCCTCTTCAATCTCGTACTCGAAAATCTCTACTTTCACTTCACCACCACCGTATCTCCATTACCAGTTGGACTCTGGTCGGTCGTCGACGGTGGCAAGAGGACGATCCATGAGGGCGCCGAGAATGCGGTGGACGAGCAGCCTCCACTCTCAGTTTGTTCATGCTGTTGAGCTTCTTGGCGGCCATGAAAGAGCTACGCCTAAATCAGTTCTAGAGCTCATGGATGTGAAGGATCTAACACTGGCTCACGTGAAAAGCCATTTACAGATGTTTCGGGCTCATAAGACGACCGACAAGCCTGCAGCTTCTCCAGGTAATTAA

Protein sequence

MSTSPTFFSSSSSSSISYSKISTFTSPPPYLHYQLDSGRSSTVARGRSMRAPRMRWTSSLHSQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTDKPAASPGN

Homology

[Close]

BLAST of Cla009148 vs. Swiss-Prot
Match: ROLL9_ORYSJ (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica GN=RL9 PE=2 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 8.8e-30
Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = 1


Query: 47  RSMRAPRMRWTSSLHSQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAH 106
           RSMRAPRMRWTS+LH++FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM+R  
Sbjct: 320 RSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTV 379

Query: 107 KTTDKPAASPG 118
           K+TDKPAAS G
Sbjct: 380 KSTDKPAASSG 390

[Close]

BLAST of Cla009148 vs. Swiss-Prot
Match: KAN2_ARATH (Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-29
Identity = 73/116 (62.93%), Postives = 85/116 (73.28%), Query Frame = 1


Query: 9   SSSSSSSISYSKISTFTS----PPPYLHYQLDSGRSSTVAR---GRSMRAPRMRWTSSLH 68
           SS+SS +++ +  S  TS    P  + H+     R+  + R    RSMRAPRMRWT++LH
Sbjct: 164 SSTSSPALTGNNNSFNTSSVSNPNYHNHHHQTLNRARFMPRFPAKRSMRAPRMRWTTTLH 223

Query: 69  SQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTDKPAASPG 118
           ++FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM+R  KTTDK AAS G
Sbjct: 224 ARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAASSG 279

[Close]

BLAST of Cla009148 vs. Swiss-Prot
Match: KAN1_ARATH (Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-29
Identity = 69/97 (71.13%), Postives = 76/97 (78.35%), Query Frame = 1


Query: 22  STFTSPPPYLHYQLDSGRSSTVAR---GRSMRAPRMRWTSSLHSQFVHAVELLGGHERAT 81
           S  +SP  + H+     RS  + +    RSMRAPRMRWTSSLH++FVHAVELLGGHERAT
Sbjct: 187 SDSSSPHHHNHHHHGMIRSRFLPKMPTKRSMRAPRMRWTSSLHARFVHAVELLGGHERAT 246

Query: 82  PKSVLELMDVKDLTLAHVKSHLQMFRAHKTTDKPAAS 116
           PKSVLELMDVKDLTLAHVKSHLQM+R  KTT+KPAAS
Sbjct: 247 PKSVLELMDVKDLTLAHVKSHLQMYRTVKTTNKPAAS 283

[Close]

BLAST of Cla009148 vs. Swiss-Prot
Match: KAN4_ARATH (Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-26
Identity = 61/78 (78.21%), Postives = 65/78 (83.33%), Query Frame = 1


Query: 40  SSTVARGRSMRAPRMRWTSSLHSQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSH 99
           SS V   RS+RAPRMRWTS+LH+ FVHAV+LLGGHERATPKSVLELM+VKDLTLAHVKSH
Sbjct: 94  SSMVGLKRSIRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSH 153

Query: 100 LQMFRAHKTTDKPAASPG 118
           LQM+R  K TDK   SPG
Sbjct: 154 LQMYRTVKCTDK--GSPG 169

[Close]

BLAST of Cla009148 vs. Swiss-Prot
Match: KAN3_ARATH (Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.5e-26
Identity = 55/71 (77.46%), Postives = 62/71 (87.32%), Query Frame = 1


Query: 47  RSMRAPRMRWTSSLHSQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAH 106
           R +RAPRMRWT++LH+ FVHAV+LLGGHERATPKSVLELMDV+DLTLAHVKSHLQM+R  
Sbjct: 160 RGVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRTI 219

Query: 107 KTTDKPAASPG 118
           K+T+KP  S G
Sbjct: 220 KSTEKPTTSSG 230

[Close]

BLAST of Cla009148 vs. TrEMBL
Match: A0A0A0KTP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G429440 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 4.1e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1


Query: 43  VARGRSMRAPRMRWTSSLHSQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM 102
           +ARGRSMRAPRMRWTSSLH+QFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM
Sbjct: 1   MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM 60

Query: 103 FRAHKTTDKPAASPGN 119
           FRAHKTT+KPAASPGN
Sbjct: 61  FRAHKTTEKPAASPGN 76

[Close]

BLAST of Cla009148 vs. TrEMBL
Match: A0A0K9NNP0_ZOSMR (Transcription repressor KAN1 OS=Zostera marina GN=ZOSMA_77G00400 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.7e-30
Identity = 78/123 (63.41%), Postives = 91/123 (73.98%), Query Frame = 1


Query: 5   PTFFSSSSSSSIS---YSKISTFTSPPPYLH-----YQLDSGRS--STVARGRSMRAPRM 64
           P+ +SSSSSS +S   Y ++ T T     +H     YQ   G    S +   RSMRAPRM
Sbjct: 160 PSSWSSSSSSGLSTPNYQRLVTPTMLKTPVHQFNHQYQFGIGSRLVSKLPTKRSMRAPRM 219

Query: 65  RWTSSLHSQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTDKPAA 118
           RWTS+LH++FVHAVELLGGHERATPK+VLELMDVKDLTLAHVKSHLQM+R  KTTD+PAA
Sbjct: 220 RWTSTLHARFVHAVELLGGHERATPKAVLELMDVKDLTLAHVKSHLQMYRTVKTTDRPAA 279

[Close]

BLAST of Cla009148 vs. TrEMBL
Match: K7LRG8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G213700 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.7e-30
Identity = 79/114 (69.30%), Postives = 88/114 (77.19%), Query Frame = 1


Query: 9   SSSSSSSISYSKISTFTSPPPYLHYQLDSG--RSSTVAR---GRSMRAPRMRWTSSLHSQ 68
           SSSSSSS  Y        P P  H+++ SG  RS  + +    RSMRAPRMRWTS+LH++
Sbjct: 275 SSSSSSSPQYG-----VGPGPS-HHEVSSGLMRSRFLPKLPAKRSMRAPRMRWTSTLHAR 334

Query: 69  FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTDKPAASPG 118
           FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM+R  KTTDKPAAS G
Sbjct: 335 FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSG 382

[Close]

BLAST of Cla009148 vs. TrEMBL
Match: K7LRG7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G213700 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.7e-30
Identity = 79/114 (69.30%), Postives = 88/114 (77.19%), Query Frame = 1


Query: 9   SSSSSSSISYSKISTFTSPPPYLHYQLDSG--RSSTVAR---GRSMRAPRMRWTSSLHSQ 68
           SSSSSSS  Y        P P  H+++ SG  RS  + +    RSMRAPRMRWTS+LH++
Sbjct: 275 SSSSSSSPQYG-----VGPGPS-HHEVSSGLMRSRFLPKLPAKRSMRAPRMRWTSTLHAR 334

Query: 69  FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTDKPAASPG 118
           FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM+R  KTTDKPAAS G
Sbjct: 335 FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSG 382

[Close]

BLAST of Cla009148 vs. TrEMBL
Match: A0A0B2QWZ3_GLYSO (Transcription repressor KAN1 OS=Glycine soja GN=glysoja_034815 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.0e-29
Identity = 79/114 (69.30%), Postives = 87/114 (76.32%), Query Frame = 1


Query: 9   SSSSSSSISYSKISTFTSPPPYLHYQLDSG--RSSTVAR---GRSMRAPRMRWTSSLHSQ 68
           SSSSSSS  Y        P P  H ++ SG  RS  + +    RSMRAPRMRWTS+LH++
Sbjct: 275 SSSSSSSPQYG-----VGPGPS-HLEVSSGLMRSRFLPKLPAKRSMRAPRMRWTSTLHAR 334

Query: 69  FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTDKPAASPG 118
           FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM+R  KTTDKPAAS G
Sbjct: 335 FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSG 382

[Close]

BLAST of Cla009148 vs. NCBI nr
Match: gi|659126425|ref|XP_008463176.1| (PREDICTED: probable transcription factor KAN2 [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 99/115 (86.09%), Postives = 101/115 (87.83%), Query Frame = 1


Query: 3   TSPTFFSSSSSSSISYSKISTFTSPPPYLHYQLDSGRSSTVARGRSMRAPRMRWTSSLHS 62
           TSP F  +SSSSSIS     TFT PPPYLHY LDS R S VARGRSMRAPRMRWTSSLH+
Sbjct: 108 TSPAFSGASSSSSIS-----TFTLPPPYLHYHLDSDRLSAVARGRSMRAPRMRWTSSLHA 167

Query: 63  QFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTDKPAASPG 118
           QFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHK TDKPAASPG
Sbjct: 168 QFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKMTDKPAASPG 217

[Close]

BLAST of Cla009148 vs. NCBI nr
Match: gi|778702668|ref|XP_011655242.1| (PREDICTED: transcription repressor KAN1-like [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 5.9e-34
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1


Query: 43  VARGRSMRAPRMRWTSSLHSQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM 102
           +ARGRSMRAPRMRWTSSLH+QFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM
Sbjct: 1   MARGRSMRAPRMRWTSSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM 60

Query: 103 FRAHKTTDKPAASPGN 119
           FRAHKTT+KPAASPGN
Sbjct: 61  FRAHKTTEKPAASPGN 76

[Close]

BLAST of Cla009148 vs. NCBI nr
Match: gi|955351393|ref|XP_014619691.1| (PREDICTED: transcription repressor KAN1-like isoform X4 [Glycine max])

HSP 1 Score: 138.7 bits (348), Expect = 6.8e-30
Identity = 79/114 (69.30%), Postives = 88/114 (77.19%), Query Frame = 1


Query: 9   SSSSSSSISYSKISTFTSPPPYLHYQLDSG--RSSTVAR---GRSMRAPRMRWTSSLHSQ 68
           SSSSSSS  Y        P P  H+++ SG  RS  + +    RSMRAPRMRWTS+LH++
Sbjct: 275 SSSSSSSPQYG-----VGPGPS-HHEVSSGLMRSRFLPKLPAKRSMRAPRMRWTSTLHAR 334

Query: 69  FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTDKPAASPG 118
           FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM+R  KTTDKPAAS G
Sbjct: 335 FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSG 382

[Close]

BLAST of Cla009148 vs. NCBI nr
Match: gi|901795378|gb|KMZ58381.1| (Transcription repressor KAN1 [Zostera marina])

HSP 1 Score: 138.7 bits (348), Expect = 6.8e-30
Identity = 78/123 (63.41%), Postives = 91/123 (73.98%), Query Frame = 1


Query: 5   PTFFSSSSSSSIS---YSKISTFTSPPPYLH-----YQLDSGRS--STVARGRSMRAPRM 64
           P+ +SSSSSS +S   Y ++ T T     +H     YQ   G    S +   RSMRAPRM
Sbjct: 160 PSSWSSSSSSGLSTPNYQRLVTPTMLKTPVHQFNHQYQFGIGSRLVSKLPTKRSMRAPRM 219

Query: 65  RWTSSLHSQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTDKPAA 118
           RWTS+LH++FVHAVELLGGHERATPK+VLELMDVKDLTLAHVKSHLQM+R  KTTD+PAA
Sbjct: 220 RWTSTLHARFVHAVELLGGHERATPKAVLELMDVKDLTLAHVKSHLQMYRTVKTTDRPAA 279

[Close]

BLAST of Cla009148 vs. NCBI nr
Match: gi|571489843|ref|XP_006591321.1| (PREDICTED: transcription repressor KAN1-like isoform X3 [Glycine max])

HSP 1 Score: 138.7 bits (348), Expect = 6.8e-30
Identity = 79/114 (69.30%), Postives = 88/114 (77.19%), Query Frame = 1


Query: 9   SSSSSSSISYSKISTFTSPPPYLHYQLDSG--RSSTVAR---GRSMRAPRMRWTSSLHSQ 68
           SSSSSSS  Y        P P  H+++ SG  RS  + +    RSMRAPRMRWTS+LH++
Sbjct: 275 SSSSSSSPQYG-----VGPGPS-HHEVSSGLMRSRFLPKLPAKRSMRAPRMRWTSTLHAR 334

Query: 69  FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAHKTTDKPAASPG 118
           FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM+R  KTTDKPAAS G
Sbjct: 335 FVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSG 382

The following BLAST results are available for this feature:

BLAST of Cla009148 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ROLL9_ORYSJ	8.8e-30	88.73	Probable transcription factor RL9 OS=Oryza sativa subsp. japonica GN=RL9 PE=2 SV...	[more]
KAN2_ARATH	1.2e-29	62.93	Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1	[more]
KAN1_ARATH	1.5e-29	71.13	Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1 SV=1	[more]
KAN4_ARATH	1.6e-26	78.21	Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4 PE=1 SV=1	[more]
KAN3_ARATH	3.5e-26	77.46	Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3 PE=2 SV=1	[more]

BLAST of Cla009148 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTP4_CUCSA	4.1e-34	96.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G429440 PE=4 SV=1	[more]
A0A0K9NNP0_ZOSMR	4.7e-30	63.41	Transcription repressor KAN1 OS=Zostera marina GN=ZOSMA_77G00400 PE=4 SV=1	[more]
K7LRG8_SOYBN	4.7e-30	69.30	Uncharacterized protein OS=Glycine max GN=GLYMA_11G213700 PE=4 SV=1	[more]
K7LRG7_SOYBN	4.7e-30	69.30	Uncharacterized protein OS=Glycine max GN=GLYMA_11G213700 PE=4 SV=1	[more]
A0A0B2QWZ3_GLYSO	1.0e-29	69.30	Transcription repressor KAN1 OS=Glycine soja GN=glysoja_034815 PE=4 SV=1	[more]

BLAST of Cla009148 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126425\|ref\|XP_008463176.1\|	1.4e-46	86.09	PREDICTED: probable transcription factor KAN2 [Cucumis melo]	[more]
gi\|778702668\|ref\|XP_011655242.1\|	5.9e-34	96.05	PREDICTED: transcription repressor KAN1-like [Cucumis sativus]	[more]
gi\|955351393\|ref\|XP_014619691.1\|	6.8e-30	69.30	PREDICTED: transcription repressor KAN1-like isoform X4 [Glycine max]	[more]
gi\|901795378\|gb\|KMZ58381.1\|	6.8e-30	63.41	Transcription repressor KAN1 [Zostera marina]	[more]
gi\|571489843\|ref\|XP_006591321.1\|	6.8e-30	69.30	PREDICTED: transcription repressor KAN1-like isoform X3 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0009845	seed germination
biological_process	GO:0048481	plant ovule development
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:0009956	radial pattern formation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010051	xylem and phloem pattern formation
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0008150	biological_process
biological_process	GO:0009887	animal organ morphogenesis
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0010162	seed dormancy process
cellular_component	GO:0009536	plastid
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0044212	transcription regulatory region DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla009148	Cla009148.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 53..103 score: 6.
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 52..107 score: 3.8
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 50..106 score: 1.3
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 49..106 score: 2.15
None	No IPR available	PANTHER	PTHR31496	FAMILY NOT NAMED	coord: 47..118 score: 2.7
None	No IPR available	PANTHER	PTHR31496:SF7	TRANSCRIPTION REPRESSOR KAN1-RELATED	coord: 47..118 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla009148	Cla97C01G008960	Watermelon (97103) v2	wmwmbB237
Cla009148	Csa5G429440	Cucumber (Chinese Long) v2	cuwmB417
Cla009148	MELO3C025116	Melon (DHL92) v3.5.1	mewmB034
Cla009148	ClCG01G008730	Watermelon (Charleston Gray)	wcgwmB144
Cla009148	CSPI05G15270	Wild cucumber (PI 183967)	cpiwmB426
Cla009148	CmaCh04G022830	Cucurbita maxima (Rimu)	cmawmB711
Cla009148	CmaCh15G007530	Cucurbita maxima (Rimu)	cmawmB279
Cla009148	CmoCh04G023860	Cucurbita moschata (Rifu)	cmowmB707
Cla009148	CmoCh15G007780	Cucurbita moschata (Rifu)	cmowmB269
Cla009148	Lsi09G009120	Bottle gourd (USVL1VR-Ls)	lsiwmB029
Cla009148	Cp4.1LG01g19850	Cucurbita pepo (Zucchini)	cpewmB441
Cla009148	CsGy5G015080	Cucumber (Gy14) v2	cgybwmB391
Cla009148	MELO3C025116.2	Melon (DHL92) v3.6.1	medwmB033
Cla009148	Carg18279	Silver-seed gourd	carwmB0524
Cla009148	Carg01453	Silver-seed gourd	carwmB0831
Cla009148	CsaV3_5G024310	Cucumber (Chinese Long) v3	cucwmB443
Cla009148	Bhi12G001052	Wax gourd	wgowmB078

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla009148	Cucurbita pepo (Zucchini)	cpewmB185
Cla009148	Cucumber (Gy14) v1	cgywmB493