MELO3C025080.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025080.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Pre-mRNA-splicing factor
Location	chr09 : 14953634 .. 14961827 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAGAACCCTCACGCGTGACCCAATCTTATTCTTCTTCTTCTTCACCCTTCAGCCGCCCGCCGCCCCTACCTCTCTTCTCTCCACCGAGCTCCCCGCCGCGCCGTACTCTGTCCACGAATCCCATCACCGTCAAGTTCCTCGTCCGACCGTCCGCCCAAGCCCAGTCGCCGCCGTCTCGTTCCCGTTCGCGTGAAGGTTGTTTCGCCGCCCGCCTCATCCTCATTTTCGTCTTCCGTTCAGTTCCGCCGCCGCAGCCCTGAACCGTCGCCGTCCATCCCTCTGTCGCATTCCCATAGCCGAGCCGACGCGTCTCGGGTGGTCGACGCGCCGTTGAGCAAGTTTCCGCCGGCCAGATCTGTCTCCGTTCGCGAAGCCCGGCTGCAGCGTTCTTCGTCCACCGTCCACGAAAGCTACCCAAGTCCAGCCGGTTTCGTCTCGCGCTGTCTCTGCACTTTTTGCCTCGCTGTGAATCTTTGGTAAGAGTAAAGCGGTGGGTTTCATAGGGTTTTCCATAGCTGATTTAAGTATAAACGTTGGAATAAAATGTTTGATTAATCGGGTTCATTACTATTAAATTCTTGAAGGATTATACAACGAGTTTGGTTGGAGTTCGATTCTCCTTTTTGCTGGGTAAGTTGTAGAAATTGGAATTGGGTTTAGAAATTGGAATTGGGTTTTGTTTGGGTAACTTTACTCATTATAGTACTTGAACCCTTATAGGATTCATTGGACTTCAATTTAAGTAAGGATTTAGCTATCTCTAGGTAAGGAATTTCCTACTACGAGACTCAATCGAGGTAAGAGATTTCCTGCTACTTGACTCAATTTGAGATTAGAAACCTAGTGACTGATATGAAAGTTATGTTATAGTGACTGTACTGAATTGATTATGTGTTTATATAGAAAGCATTACTTGTATACATTTTGACTGTATTTTTTATTTTTCTTCACTATTTCTTCAGGCTCTGTTAGAAGTATCAGAAAACGAGTTTATATTATTTTTTACTCTCTGAATTTGAAATGTAGTTGTATGTTCTCATCCCCGTAGGTAGATGTCTGGTTGATAACCCATAAATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTATATCGTTTGAAAACATACCATGAAGTCGTTGATGAGATTTATAACCAAGTTGATCACGTGGAGCCATGGATGACTGGTAACTGCCGTGGCCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAGCTGACTGTTAAGCAAATGCATGGGCTGTTAAAGCATGAGGATTCTCCTTACATCAGAGCGGTAGGTGAAATCCTTTTTGACCTTTAATAATCATGTTTATAGTAAAGACGTATTATATTGTTATTTAGTATTTATATCATGGTTGATTTAGTTATTCATTTTTTGGAAATGTAATGTGGTGCAAACCAATGTGGAGTGGAGTCAAATTATTCTGATTTTATATTAAGAAAATATAGAGATAGTACTTGTACTTGTGTTCACGGTCAACCAACAAAGTTACTGCAGGCTACTTGAGAAACTTAACAGTAATTTTGTAAAACAGAGATCAATCTCCAATGTAAACAAAAACAAATCACATCATGATCGACATGAAGACTGGATAGCATGCAATGTATCCATTTTCTAAGAGTTAATTTTCTCCTATGTTGCATGAACTTTTACAATCTTTACTGTGCCCTGGGAAAATATTAATGTATTATCTAGTTTGAAACATGGATTAGTAACAAACAAGTTGGACCAAATATAGCTGTTGTAAATGGTATACTAGGGTAATTAATTAACTTGCAGTAATTTGGACAGCCAGCGGTAGATTTTGAAGTGTATTCTTAAGGTCTGATTCCTGTAGATTGTAGATAGTAGTTGTCTTGAGGACATTCATGAGCTTGATTAAATTCTTTATCTTTTCAACATAAACTTACATTATAATGCATTTTTTCCAGCTTTATTTATGTTGTGGTAGGTCTATTCATGGATCTTTGGAGAATCTGGATTGCTTTGTTTTTGCTTTTGTGTTGTTATTTTCTTTGCAAGTTTCCGTTTCATTTTAGGATTGCTAGTTGATTAATCAGTTTCTATCTATACTTCGAAATTTTAGTTCTCTCTCAACTTTAAGATGTTTAATGAAAAAACTTGTTCTTTTGGAGGATCTTAGTCAATGCGATCTAGAACAACTACTAATCCAAACTAGTCTGCTGGTTGAAAATATGTTGGAGACTATTCTTTCCCAGTCTTTCTTTGTTCTATCACTTCCATTATGTCCTGACTCATGTATAGTGTGGTCTGATGGTTCTGTCGTACTAGAAATAGTATCATTGGTACTGGGCATAAGCATTTCTCTTCATCCTCTCCCTTAACACAAGGGAAAAGGATTCACTTTGTGAGCAGAAAAGGTTTCTTCTGCCATTAACAATTCCTGAATTCCCTGCCAAGAAGATTACTGGAGAAGTTTTCCAACTATCCTTATTGACAATAAAACTGAATAATTGCAAGAAGATCTGGGCCGAAAAGCTCGATCCTGATGTATGAATTAGATTAGGTAGAAGTTGTCATGAGGTTTTCTACATTTTGAAACAGTTGTAGGTTTTCTTGAAGAAGTGCCACCAACTGTCTAGTAAAAAAGCTTAGTGTTGAATTTTATTGTGATGGGTCTTATTACAAAAATATTTTTCCTTCAAATCAAAGTGTTTTTTCCGTAAGCATCTAAATACAATAAAAATTTATCATTCAAAAGAACGGCATGAGTCATAAAACCTTAATTGTTTTGAAGCAATAAGAATGAAAATAGTATTCGTGGAATAACTTACTGTGATCAGAGTTAGCCGTAAGTTTGGAAAGTGATCAAGGATCACTTTTTGGAAGATCTCAAAATCACCAATGAATATGTCTTGAGAGCTGTTGGTTATTATGGATTTTAGAATGGTAAGATGCCGTGTGCAATTGCAGAACGTTTGATTTGTTTTAAATGTCCACTTGAAAAGTTTCAACTTTTTCTATGAAAATAAACAACTCCTCTTTTAGGCTTGTGATCATACTGTAGTTGGGTTCTCTTTCTCATTCAAATACCCCATTTTAACAAGTCTTCTATTAGGAGTACAGGTTTCCTCTCTCTTTATCTCTCTTGAATTTATTGTTATGAGTTGATAATGTTTGTGATTTTATTTGGATTGAAATTTTGAATGGACTTTATGTTAGAAATTCTTTTTGAGATCTTTGTTGTTTGTCTTTTGTCCTTTATGCTAGTTCCTGCATTACTCTATTTCTTTAGTTTATAAAACTGTCTGATACATGCATATGCTCGGTAACATTCTTGCCTTGCTCACCAGATGTTATGAACAAAGGATGAGCCTTGTCACTTTGGGTTGCTGTGCCCTTTCTCACACTATAAATTAATAGTGCCTTTGCTTTGCTTTGCAGTTATCTAAGGTTTGAGGTGACCTTTTTTCATTTTTATTTTTTAAAGACACTGAGATTATTTCAATCCCTTGGATTTATTTCTGTAAATTGATATTCTTTGATGAGTGCACCATGTTTTCTGTATGGAAATGGCATCCTTTTATTTTATGCTATTAATAAGGTCAGAATACATGAAAGGAATTTAATGTGGTTACTTATATTCTTGCATGCCTTTTTTCTGCATAATTTGTTTTCTTATCCGATAATTATGATGCCCTTAGCTGTCCGATGTTTAAGAAGTTATGGTTCTAACTCTATTATACACTTTGTTCTTCTACCTTTTGATGTCATCTCTTCAATTAATTTTTTCAGATTGGATTTCTCTACTTAAGATATGTTGCAGATCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGATGAGGTATGTGATGCATATAGGACCTTGATTAGCATTAATATTACTATTATTTATATTGTTAATTTAATTTCGTCGATGGTACTAAGCATTATGGTTAGGATGCATGTAAGATGCTTTCTGGTTTCTGATACCTTCAATATATATACATTGATAATTGAATAAGTGGAGCTGGGAGTTTGGGAATTAGAATTACGTAATGGGGCCTTGGGCTGGAATGATTGAGGGTTTCTCTTGTAAATTGCCTTTCCACATTTTATGCTACCTTTTAATTTCTTTGCTTGGCCTGGGTTGTCAAGATATCCATAGAAGTCTAAGTTCTTTGCGTGACAATTTTGCATGGGAGAGTATACATCCAAGACCATCTCAAGAGACTTTTCGTTTGTGATGCACCCGCAATGCACATTCTCTAGAGGCGGTTCGAGGATTTTGAACGTTTCTATGAGGTTGCTAGTCTGCTTATTCCCTTAGCAGTCGATTGGGATTGGTTTTGCTTTTAGCAGAAATTGCAGATTTATGCTTGAGGAGGCTCTCTTGAACTTTTTGTTTTAGAATAAGTGTAGTGTACCGTTCTGTAACATGGATGTTTCTATTTTTGCTATATTTCACGAATTTGGCTAGCGAGAAAGAGCAGGATTTATTGAGAGGTGAATAGATCTTGGGAGGAGGTTGCTAGCCGCTAGGTTTAATGTATTTTAATGGGCATTCGTTACTTAAGCTTTTGTAATCACTACCTTGGTCTTATTCTTTCGGATAGGAGTTTCTTCTTGTAATCATTGTTTTATGCTTTTTGGGACCTGTTTTATGTTTTTTTTTTCCTTGTACTTCTTTCATTTTTATAGAATGAAAGTTTAGTTTCTTATTAAGAAAAATTCTTAGGCAGTTTTTCTCGGAATAGTTTGGGGTAAGTTTGGAAGTGCCTAAATTCTCTTGTCTCCTTTGGTCCTTTCAAGTAAACACTCATTGCCATCCTTCTATAGCTCTTATTGTCTATCATCTCTTTTGACCAATTGGAGATTTATTTTTTACTCTTTTGGTTTCAGTATCGTGCCTTTTTTAGTAAATTCTACACTAGTGAAATTTGTTTCCTATAATGAAAAAGGGGAAGCGAACGCCCTTATCAGTCTATGTTCACTTATTCCAACAATTTGGGGATTTTACTTGTAACTTCCATGTTTAAGCTTTTTTCAGAGGGTTACTGGTTCTTCAGTTGTTGTTTGTAGTCATTTTCCCTTTCCTACAAATAACAGAAAATAAAATTCTTCCTCACAAGTTTATGGCATTTTGGATGTTTTTCTTTTTAATGGATTTAATAAAAATCTTAAGCTATAAAAGGTGGAAAAGAAATGACTGACTTGATGTGTTTCAGGAATTTTCACCCGGATCCCATGGACGGATGACTACAATGGGTGTTTATGTGCGTGATTTGCTCCTTGGACAGGTCAGGTTATATACCAACATTTCCCCTTAAATATCACGTATCTTGATTATATCTTTCTCTTTTCCTTTTTTTAACTTCCTTGCGTCACAGACATGATAAATTGTGTGTATATACAGTTGCTGTTGGCATTTCTCTAGTGTTTAACCATGGGAATGCTGCATTGTCCATTCATGGTTGGAAGATATTATTAAGAGTTATATATTGACTATAATAGAGTTAGAGATTTTCACCAAGAGGAGGAGATGCAAAAAAGTTCAGGAAAAGAAGAACTACAGCATAACAGTAACCCCTTCCCTCCCAATTGAAGTTATTAGATCCTTTTCATTTCCGTTAAAACGTCTCATATTTCGTTGGCTTATCATGGTGATTCAAAGTCATGTTCTCTGACTTGAGCTGGTGAAGTTGACTTCATAATGAGCTCTTTGGTGTCTTGTCCACTTTGACCTTGTTTTCATTTTATTGTTATTTGTTTTTTCTAATGTATCCAATAGTTTCTTGACTTCTTTATATAACATTTTCTTGTAGTTCTATTTCCCACTATGCTCCTTGTAGATTGATGGAGTATGGGTGTTTTGACTTTAACCTGAGACACCTTCTAGAGCTCTGCCCTTTCATGAACTTTCATAATGGGATGTGGAAAGGAAGTTTTGGCCTTGAGATTATAACTAATTATTTTCCTCACATGTTCAGATCATGAATAAAGTGTTTTTTTTTCTTGAATGCATCAAATTATGAAAAGAGACTAACGCTAAAAATTACAATGAAACAAAAATAAAAGAAACAAATAATAGCATCGAAGCTTCCACAATCTGGTTACAAACAGAAGAAAGACCATGAAAGATAAAGGAAACCATTACAAACAAAAGACTTGAAAAGAAAAAATATGGAAGACTTGGGAAGATAACACCACATATACTTCCAAACCAAAAATCCGGCTGGAGATACTTTGACATTAACCCCACAACCGATGAAACATAGCCTTAAAGAATCTCCAAACCATGATGTTTTAAGGAATGTTATTGCTCTGTTGTAGTATGTGGTCAAAAGAGATGAATCAAGTGTATTAGATGAAAAAATAAAATATGAGTCCAAGGTTTTACTTTTTATTTTATCACATTTTGTAATTTGAAAAGTGTGGTTATTGACTTCGCTGAATTGAATAATGGAGGAGATAAATGGAGACTAAATATGGGTTTGCATTTGGCCAACTGAATGGAATGATCGTTAAGCTATTTTATTTGTCTTTCTATCTATTGAACGGAAAAATTTGTGTTTTTCTCTCTGGTGGTATTAATGATTCTATTGTGTTGGCCGACGAGCGAGCGGAATGATCATTATTTAACATGTTTGAACTGGAACATATGAACCACATATGCCTTTAGACATATTGCTATTTTTAATCTTCTGACTTTGTAGCTAAACAGGTACTCACATTTTGTTTGCCAATTGCAGTATTACTTTGACACCCTTTTCCCACGTATTCCGGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTCGAAAAGTTGAAGCTTCCAAGCAAGCACTCGGGCGTGACAGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGGCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCTCCACATCGTGCCTCAACTAGGGATTCATCTCCTGTTCGTCGTACGCTGCCATCATCTGTAAATGATAGAGATATCAACGACGATCTACGAAGATCTCCAAGCAATCGCCGTAGTCAAAGTCGTGAACATCCAGATAGTAGGGAGAGGAGCAGGGATAGAGAATATGACAGGGAGAGGAGCAGGGATAGAGAATACGACAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGAGAGGAGCAGGGATAGAGATTATGACAGGGACAGAGATAGAGGAAGGGATAGGGACCGAGATCGGGAACTTGATCGGGACAGAGAGAAGTATAGAGATCGGGAAAGGGACCGAGACAGAGAAAGAGAGAAAGCCAGGGATAGGGAAAGGGACAGAGAGCGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTACAGTGACAGAGAGAGTAGAAGGGACTTTGAAAGGAGTAGCCGTGATGGTGGCACCAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGCAGCAGAGGTCGAAGTCTACAAACACATCACGAGAGAGAGCAAAGTCCTGCAAGGGGCGGAACTACGGAGAAGGCATCTGTGATATCGAGCAATCTGGCAAAACTAAAAGATATATATGGTGATGTGAGCGAGCAGAAAGGGGATTCGAGCAAAATTAATAGAAGAGATAGTAGTGGTGAAGAAGTGATTAGATTGGGTGGTTCCTGGAAATAGTGAATGATGAATGGTCTCAAATACAAGGAACCTCCACTCCACTGTATTCAATCACATGTTATCTTCACTTAGAAAACAGATCTTAGTCTTTTATTGGAAAAGGGAAGAAAAATCAATGTATTTGCCACTTTGAGTTTATAGTATTTATTCATCATCTCACCTCTCCCGATCAAATCTATTTTATCTTATCAGTTGAATGCCTTGAAGACTTCAGGCAAAATGTAATTCATGCAACCATTGTGGCTGTGTATTAGGTTAAGTTTGACTTCATTACTGCTTCTGTGTGGACAATAATTTCTATTCTCTCAAAAGAATCATATACTTTCATCTGTAAATTATAAATTATTTTGCA

mRNA sequence

GGGAGAACCCTCACGCGTGACCCAATCTTATTCTTCTTCTTCTTCACCCTTCAGCCGCCCGCCGCCCCTACCTCTCTTCTCTCCACCGAGCTCCCCGCCGCGCCGTACTCTGTCCACGAATCCCATCACCGTCAAGTTCCTCGTCCGACCGTCCGCCCAAGCCCAGTCGCCGCCGTCTCGTTCCCGTTCGCGTGAAGGTTGTTTCGCCGCCCGCCTCATCCTCATTTTCGTCTTCCGTTCAGTTCCGCCGCCGCAGCCCTGAACCGTCGCCGTCCATCCCTCTGTCGCATTCCCATAGCCGAGCCGACGCGTCTCGGGTGGTCGACGCGCCGTTGAGCAAGTTTCCGCCGGCCAGATCTGTCTCCGTTCGCGAAGCCCGGCTGCAGCGTTCTTCGTCCACCGTCCACGAAAGCTACCCAAGTCCAGCCGGTTTCGTCTCGCGCTGTCTCTGCACTTTTTGCCTCGCTGTGAATCTTTGGTAAGAGTAAAGCGGATTATACAACGAGTTTGGTTGGAGTTCGATTCTCCTTTTTGCTGGGATTCATTGGACTTCAATTTAAGTAAGGATTTAGCTATCTCTAGGTAAGGAATTTCCTACTACGAGACTCAATCGAGGTAGATGTCTGGTTGATAACCCATAAATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTATATCGTTTGAAAACATACCATGAAGTCGTTGATGAGATTTATAACCAAGTTGATCACGTGGAGCCATGGATGACTGGTAACTGCCGTGGCCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAGCTGACTGTTAAGCAAATGCATGGGCTGTTAAAGCATGAGGATTCTCCTTACATCAGAGCGATTGGATTTCTCTACTTAAGATATGTTGCAGATCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGATGAGGAATTTTCACCCGGATCCCATGGACGGATGACTACAATGGGTGTTTATGTGCGTGATTTGCTCCTTGGACAGTATTACTTTGACACCCTTTTCCCACGTATTCCGGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTCGAAAAGTTGAAGCTTCCAAGCAAGCACTCGGGCGTGACAGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGGCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCTCCACATCGTGCCTCAACTAGGGATTCATCTCCTGTTCGTCGTACGCTGCCATCATCTGTAAATGATAGAGATATCAACGACGATCTACGAAGATCTCCAAGCAATCGCCGTAGTCAAAGTCGTGAACATCCAGATAGTAGGGAGAGGAGCAGGGATAGAGAATATGACAGGGAGAGGAGCAGGGATAGAGAATACGACAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGAGAGGAGCAGGGATAGAGATTATGACAGGGACAGAGATAGAGGAAGGGATAGGGACCGAGATCGGGAACTTGATCGGGACAGAGAGAAGTATAGAGATCGGGAAAGGGACCGAGACAGAGAAAGAGAGAAAGCCAGGGATAGGGAAAGGGACAGAGAGCGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTACAGTGACAGAGAGAGTAGAAGGGACTTTGAAAGGAGTAGCCGTGATGGTGGCACCAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGCAGCAGAGGTCGAAGTCTACAAACACATCACGAGAGAGAGCAAAGTCCTGCAAGGGGCGGAACTACGGAGAAGGCATCTGTGATATCGAGCAATCTGGCAAAACTAAAAGATATATATGGTGATGTGAGCGAGCAGAAAGGGGATTCGAGCAAAATTAATAGAAGAGATAGTAGTGGTGAAGAAGTGATTAGATTGGGTGGTTCCTGGAAATAGTGAATGATGAATGGTCTCAAATACAAGGAACCTCCACTCCACTGTATTCAATCACATGTTATCTTCACTTAGAAAACAGATCTTAGTCTTTTATTGGAAAAGGGAAGAAAAATCAATGTATTTGCCACTTTGAGTTTATAGTATTTATTCATCATCTCACCTCTCCCGATCAAATCTATTTTATCTTATCAGTTGAATGCCTTGAAGACTTCAGGCAAAATGTAATTCATGCAACCATTGTGGCTGTGTATTAGGTTAAGTTTGACTTCATTACTGCTTCTGTGTGGACAATAATTTCTATTCTCTCAAAAGAATCATATACTTTCATCTGTAAATTATAAATTATTTTGCA

Coding sequence (CDS)

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTATATCGTTTGAAAACATACCATGAAGTCGTTGATGAGATTTATAACCAAGTTGATCACGTGGAGCCATGGATGACTGGTAACTGCCGTGGCCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAGCTGACTGTTAAGCAAATGCATGGGCTGTTAAAGCATGAGGATTCTCCTTACATCAGAGCGATTGGATTTCTCTACTTAAGATATGTTGCAGATCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGATGAGGAATTTTCACCCGGATCCCATGGACGGATGACTACAATGGGTGTTTATGTGCGTGATTTGCTCCTTGGACAGTATTACTTTGACACCCTTTTCCCACGTATTCCGGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTCGAAAAGTTGAAGCTTCCAAGCAAGCACTCGGGCGTGACAGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGGCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCTCCACATCGTGCCTCAACTAGGGATTCATCTCCTGTTCGTCGTACGCTGCCATCATCTGTAAATGATAGAGATATCAACGACGATCTACGAAGATCTCCAAGCAATCGCCGTAGTCAAAGTCGTGAACATCCAGATAGTAGGGAGAGGAGCAGGGATAGAGAATATGACAGGGAGAGGAGCAGGGATAGAGAATACGACAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGAGAGGAGCAGGGATAGAGATTACGACAGGGAGAGGAGCAGGGATAGAGATTATGACAGGGACAGAGATAGAGGAAGGGATAGGGACCGAGATCGGGAACTTGATCGGGACAGAGAGAAGTATAGAGATCGGGAAAGGGACCGAGACAGAGAAAGAGAGAAAGCCAGGGATAGGGAAAGGGACAGAGAGCGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTACAGTGACAGAGAGAGTAGAAGGGACTTTGAAAGGAGTAGCCGTGATGGTGGCACCAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGCAGCAGAGGTCGAAGTCTACAAACACATCACGAGAGAGAGCAAAGTCCTGCAAGGGGCGGAACTACGGAGAAGGCATCTGTGATATCGAGCAATCTGGCAAAACTAAAAGATATATATGGTGATGTGAGCGAGCAGAAAGGGGATTCGAGCAAAATTAATAGAAGAGATAGTAGTGGTGAAGAAGTGATTAGATTGGGTGGTTCCTGGAAATAG

Protein sequence

MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVKDDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDDLRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRDRDYDRERSRDRDYDRERSRDRDYDRERSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRERDRDREREKARDRERDRERDRERSYDYDRRTHYSDRESRRDFERSSRDGGTRHYRRSRSRSRSRSRGRSLQTHHEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSKINRRDSSGEEVIRLGGSWK

Homology

[Close]

BLAST of MELO3C025080.2 vs. NCBI nr
Match: XP_008463144.1 (PREDICTED: pre-mRNA-splicing factor 38B [Cucumis melo] >XP_008463145.1 PREDICTED: pre-mRNA-splicing factor 38B [Cucumis melo] >XP_016902978.1 PREDICTED: pre-mRNA-splicing factor 38B [Cucumis melo])

HSP 1 Score: 605.1 bits (1559), Expect = 2.1e-169
Identity = 488/488 (100.00%), Postives = 488/488 (100.00%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120

Query: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG
Sbjct: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240

Query: 241 LRRSPSNRRSQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           LRRSPSNRRSQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 LRRSPSNRRSQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFERSSRDGGTRHYRRXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFERSSRDGGTRHYRRXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFERSSRDGGTRHYRRXXXXXXXXXX 420

Query: 421 XXXXXXXXEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSKINRRDSSGEEV 480
           XXXXXXXXEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSKINRRDSSGEEV
Sbjct: 421 XXXXXXXXEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSKINRRDSSGEEV 480

Query: 481 IRLGGSWK 489
           IRLGGSWK
Sbjct: 481 IRLGGSWK 488

[Close]

BLAST of MELO3C025080.2 vs. NCBI nr
Match: XP_011655154.1 (PREDICTED: pre-mRNA-splicing factor 38B [Cucumis sativus] >XP_011655155.1 PREDICTED: pre-mRNA-splicing factor 38B [Cucumis sativus])

HSP 1 Score: 542.3 bits (1396), Expect = 1.6e-150
Identity = 426/488 (87.30%), Postives = 427/488 (87.50%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120

Query: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG
Sbjct: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSS NDRD N  
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSANDRDNN-- 240

Query: 241 LRRSPSNRRSQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                                                           XXXXXXXXXXXX
Sbjct: 241 ------------------------------------------------XXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFERSSRDGGTRHYRRXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ERSSRDGGTRHYRRXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERSSRDGGTRHYRRXXXXXXXXXX 420

Query: 421 XXXXXXXXEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSKINRRDSSGEEV 480
           XXXXXXXX      ARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSK+NRRD SGEEV
Sbjct: 421 XXXXXXXXXXXXXXARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSKVNRRDGSGEEV 438

Query: 481 IRLGGSWK 489
           IRLGGSWK
Sbjct: 481 IRLGGSWK 438

[Close]

BLAST of MELO3C025080.2 vs. NCBI nr
Match: XP_022993767.1 (pre-mRNA splicing factor SR-like 1 [Cucurbita maxima])

HSP 1 Score: 535.0 bits (1377), Expect = 2.6e-148
Identity = 413/498 (82.93%), Postives = 422/498 (84.74%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW EPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWVEPYVK 120

Query: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVV+NLEKLKLPSKHSG
Sbjct: 121 DEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVANLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240
           VTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLP+S  DRD +DD
Sbjct: 181 VTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPTSAIDRDNSDD 240

Query: 241 LRRSPSNRRSQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           LRRSPS+RRSQSR                                         XXXXXX
Sbjct: 241 LRRSPSSRRSQSR----------------------------------------EXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFERSSRDGGTRHYRR------XXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXX         DFERSSRDGGTRHYRR      XXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXHYTDREGRRDFERSSRDGGTRHYRRXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQK--GDSSK--I 480
           XXXXXXXXXXXXXX          T+EK S+ISSNLAKLKD+YGDVSEQK  GD SK  I
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXTSEKTSIISSNLAKLKDMYGDVSEQKGGGDPSKERI 458

Query: 481 NRRDSSGEEVIRLGGSWK 489
           NRRDSSGEEVIRLGGSWK
Sbjct: 481 NRRDSSGEEVIRLGGSWK 458

[Close]

BLAST of MELO3C025080.2 vs. NCBI nr
Match: XP_022141497.1 (pre-mRNA splicing factor SR-like 1 isoform X1 [Momordica charantia] >XP_022141498.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Momordica charantia])

HSP 1 Score: 527.7 bits (1358), Expect = 4.2e-146
Identity = 414/494 (83.81%), Postives = 425/494 (86.03%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120

Query: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVV+NLEKLKLPSKHSG
Sbjct: 121 DEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVANLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLP S ND+D  DD
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSANDKDNGDD 240

Query: 241 LRRSPSNRRSQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +RRSPS+RRSQSR                                     XXXXXXXXXX
Sbjct: 241 VRRSPSSRRSQSR--------------------------------EHPDNXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFERSSRDGGTRHYR---RXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +SSRD G+RHYR    XXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSRDDGSRHYRXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSK--INRRDS 480
           XXXXX      ER  SP R G T+K S ISSNLAKLKDIYGDVS+QKGD SK  + +RD 
Sbjct: 421 XXXXXTVNAHHERVPSPVRDGNTDKTSNISSNLAKLKDIYGDVSDQKGDCSKERVPKRDG 462

Query: 481 SGEEVIRL-GGSWK 489
           SGEEV RL GGSWK
Sbjct: 481 SGEEVFRLGGGSWK 462

[Close]

BLAST of MELO3C025080.2 vs. NCBI nr
Match: XP_023548529.1 (pre-mRNA splicing factor SR-like 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 510.8 bits (1314), Expect = 5.3e-141
Identity = 378/496 (76.21%), Postives = 390/496 (78.63%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGK IDSLLEKVLCMNILSSDYFKELYRLKT+HEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKAIDSLLEKVLCMNILSSDYFKELYRLKTFHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVAD KTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADTKTLWNWFEPYVK 120

Query: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSP SHGRMTTMGVYVRDLLLGQYYFDTLFPRIPV VLRQV +NLEKLKLPSKHSG
Sbjct: 121 DEEEFSPESHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVSVLRQVAANLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVR TLP SV+DRD  DD
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRCTLPPSVSDRDNKDD 240

Query: 241 LRRSPSNRRSQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           L+RSPS+R   +R                                               
Sbjct: 241 LQRSPSSRHPDNR----------------------------------------------- 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 --------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFERSSRDGGTRHY-----RRXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXX         D++RSSRD  TRHY       XXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXRTHYADSRRDYKRSSRDSVTRHYXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSK---INR 480
           XXXX         +RE SP RGGTTEK S+   NLAKLKDIYGDV E+KGD SK    NR
Sbjct: 421 XXXXLQTGNDGYHKREASPVRGGTTEKTSI---NLAKLKDIYGDVREEKGDLSKERFNNR 438

Query: 481 RDSSGEEVIRLGGSWK 489
           RDSSGEEVIRLGGSWK
Sbjct: 481 RDSSGEEVIRLGGSWK 438

[Close]

BLAST of MELO3C025080.2 vs. TAIR10
Match: AT5G37370.1 (PRP38 family protein)

HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-113
Identity = 205/253 (81.03%), Postives = 226/253 (89.33%), Query Frame = 0


Query: 2   EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVKD 121
           PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRYVAD KTLW W+EPY+KD
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKD 122

Query: 122 DEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSGV 181
           DEEFSPGS+GRMTTMGVYVRDLLLG YYFDTLFPRIPVPV+RQ+VSNLEK+ LP+K SG 
Sbjct: 123 DEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKMNLPTKPSGS 182

Query: 182 TGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDDL 241
           TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVRR  P+   DR+  D++
Sbjct: 183 TGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPTGY-DRNGGDEV 242

Query: 242 -RRSPSNRRSQSR 254
            +RSP  RRSQSR
Sbjct: 243 QQRSP--RRSQSR 251

HSP 2 Score: 53.1 bits (126), Expect = 5.4e-07
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0


Query: 447 SSNLAKLKDIYGDVSEQKGDSSKINRRDSSGEEVIRLGG-SWK 489
           +SNLAKLKD+YGD S QK D     R+DSS EEVI+LGG SW+
Sbjct: 351 NSNLAKLKDLYGDASSQKRDEGFGTRKDSSSEEVIKLGGSSWR 393

[Close]

BLAST of MELO3C025080.2 vs. Swiss-Prot
Match: sp|Q8RWB1|SRL1_ARATH (Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana OX=3702 GN=SRL1 PE=1 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 2.1e-112
Identity = 205/253 (81.03%), Postives = 226/253 (89.33%), Query Frame = 0


Query: 2   EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVKD 121
           PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRYVAD KTLW W+EPY+KD
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKD 122

Query: 122 DEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSGV 181
           DEEFSPGS+GRMTTMGVYVRDLLLG YYFDTLFPRIPVPV+RQ+VSNLEK+ LP+K SG 
Sbjct: 123 DEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKMNLPTKPSGS 182

Query: 182 TGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDDL 241
           TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVRR  P+   DR+  D++
Sbjct: 183 TGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPTGY-DRNGGDEV 242

Query: 242 -RRSPSNRRSQSR 254
            +RSP  RRSQSR
Sbjct: 243 QQRSP--RRSQSR 251

HSP 2 Score: 53.1 bits (126), Expect = 9.8e-06
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0


Query: 447 SSNLAKLKDIYGDVSEQKGDSSKINRRDSSGEEVIRLGG-SWK 489
           +SNLAKLKD+YGD S QK D     R+DSS EEVI+LGG SW+
Sbjct: 351 NSNLAKLKDLYGDASSQKRDEGFGTRKDSSSEEVIKLGGSSWR 393

[Close]

BLAST of MELO3C025080.2 vs. Swiss-Prot
Match: sp|Q80SY5|PR38B_MOUSE (Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.9e-41
Identity = 91/190 (47.89%), Postives = 114/190 (60.00%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 59  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 118

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA+GF+Y+RY   P  LW+W
Sbjct: 119 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW 178

Query: 134 FEPYVKDDEEFS-PGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLK 184
           FE ++ D+E+       G + T+G  +R  L    +F TLFPRIPVPV + +   ++   
Sbjct: 179 FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRP 238

[Close]

BLAST of MELO3C025080.2 vs. Swiss-Prot
Match: sp|Q6AXY7|PR38B_RAT (Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.9e-41
Identity = 91/190 (47.89%), Postives = 114/190 (60.00%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA+GF+Y+RY   P  LW+W
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW 177

Query: 134 FEPYVKDDEEFS-PGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLK 184
           FE ++ D+E+       G + T+G  +R  L    +F TLFPRIPVPV + +   ++   
Sbjct: 178 FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRP 237

[Close]

BLAST of MELO3C025080.2 vs. Swiss-Prot
Match: sp|Q5VTL8|PR38B_HUMAN (Pre-mRNA-splicing factor 38B OS=Homo sapiens OX=9606 GN=PRPF38B PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.2e-41
Identity = 90/187 (48.13%), Postives = 113/187 (60.43%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA+GF+Y+RY   P  LW+W
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW 177

Query: 134 FEPYVKDDEEFS-PGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLK 181
           FE ++ D+E+       G + T+G  +R  L    +F TLFPRIPVPV + +   ++   
Sbjct: 178 FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRP 237

[Close]

BLAST of MELO3C025080.2 vs. Swiss-Prot
Match: sp|Q6P7Y3|PR38B_DANRE (Pre-mRNA-splicing factor 38B OS=Danio rerio OX=7955 GN=prpf38b PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.4e-38
Identity = 84/177 (47.46%), Postives = 111/177 (62.71%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  N+LSS YFK +LY LKTYHEVVDEIY +V+HVEPW          TG C G  
Sbjct: 36  LNPMILTNVLSSPYFKVQLYELKTYHEVVDEIYFKVNHVEPWEKGSRKTAGQTGMCGGVR 95

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSP IRA+GF+Y+RY   P  L +W
Sbjct: 96  GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHSDSPDIRALGFMYIRYTQPPPDLVDW 155

Query: 134 FEPYVKDDEEFS-PGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLE 171
           ++ ++ D+EE       G + T+G  +R  L    +F TLFPRIPVPV + +  +++
Sbjct: 156 YDEFLDDEEELDVKAGGGCVMTVGEMLRSFLTKLEWFSTLFPRIPVPVQKAIDQHMK 212

[Close]

BLAST of MELO3C025080.2 vs. TrEMBL
Match: tr|A0A1S3CIJ0|A0A1S3CIJ0_CUCME (pre-mRNA-splicing factor 38B OS=Cucumis melo OX=3656 GN=LOC103501359 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.4e-169
Identity = 488/488 (100.00%), Postives = 488/488 (100.00%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120

Query: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG
Sbjct: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240

Query: 241 LRRSPSNRRSQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           LRRSPSNRRSQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 LRRSPSNRRSQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFERSSRDGGTRHYRRXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFERSSRDGGTRHYRRXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFERSSRDGGTRHYRRXXXXXXXXXX 420

Query: 421 XXXXXXXXEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSKINRRDSSGEEV 480
           XXXXXXXXEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSKINRRDSSGEEV
Sbjct: 421 XXXXXXXXEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSSKINRRDSSGEEV 480

Query: 481 IRLGGSWK 489
           IRLGGSWK
Sbjct: 481 IRLGGSWK 488

[Close]

BLAST of MELO3C025080.2 vs. TrEMBL
Match: tr|I1MBS7|I1MBS7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100793812 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 8.0e-130
Identity = 229/253 (90.51%), Postives = 243/253 (96.05%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEI+TCG+PIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIQTCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRY ADPKTLWNWFE YVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCADPKTLWNWFESYVK 120

Query: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DDEEFSPGS+GRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPS HSG
Sbjct: 121 DDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSTHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240
            TGET R GS+DTARRPPSVKA+LSVSFGQRAPHRASTRDSSP+RRTLPS  ++++ +DD
Sbjct: 181 STGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPS--HEKNGSDD 240

Query: 241 LRRSPSNRRSQSR 254
           +RRSPSNRRSQSR
Sbjct: 241 IRRSPSNRRSQSR 251

[Close]

BLAST of MELO3C025080.2 vs. TrEMBL
Match: tr|I1JHT5|I1JHT5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100788237 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129
Identity = 228/252 (90.48%), Postives = 243/252 (96.43%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEI+TCG+PIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIQTCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRY ADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHLDSPYIRAVGFLYLRYCADPKTLWNWFEPYVK 120

Query: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DDEEFSPGS+GRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLP+ HSG
Sbjct: 121 DDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPTTHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240
            TGET R GS+DTARRPPSVKA+LSVSFGQRAPHRASTRDSSP+RRTLPS  ++++ +DD
Sbjct: 181 STGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPS--HEKNGSDD 240

Query: 241 LRRSPSNRRSQS 253
           +RRSPSNRRSQS
Sbjct: 241 IRRSPSNRRSQS 250

[Close]

BLAST of MELO3C025080.2 vs. TrEMBL
Match: tr|A0A151S0K7|A0A151S0K7_CAJCA (Pre-mRNA-splicing factor 38B OS=Cajanus cajan OX=3821 GN=KK1_029949 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 8.9e-129
Identity = 225/253 (88.93%), Postives = 244/253 (96.44%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEI+TCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRY ADPKTLWNWFEPY+K
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCADPKTLWNWFEPYIK 120

Query: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DDEEFSPGS+GRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVS+LEK+KLP+ HSG
Sbjct: 121 DDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSHLEKMKLPTTHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240
            TGE+ R GS+DTARRPPSVKA+LSVSFGQRAPHRASTRDSSP+RRTLPS  ++R+ +DD
Sbjct: 181 STGESTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPS--HERNGSDD 240

Query: 241 LRRSPSNRRSQSR 254
           +RRSP++RRSQSR
Sbjct: 241 IRRSPTSRRSQSR 251

[Close]

BLAST of MELO3C025080.2 vs. TrEMBL
Match: tr|A0A1S3UFS4|A0A1S3UFS4_VIGRR (pre-mRNA-splicing factor 38B OS=Vigna radiata var. radiata OX=3916 GN=LOC106764886 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.6e-128
Identity = 224/253 (88.54%), Postives = 243/253 (96.05%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEI+TCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRY  DPKTLW+WFEPY+K
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCGDPKTLWSWFEPYIK 120

Query: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSPGS+GRMTTMGVY+RDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLP+ HSG
Sbjct: 121 DEEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPTTHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240
            TGE+ R GS+DTARRPPSVKA+LSVSFGQRAPHRASTRDSSP+RRTLPS  ++R+ +DD
Sbjct: 181 STGESTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPS--HERNGSDD 240

Query: 241 LRRSPSNRRSQSR 254
           +RRSPS+RRSQSR
Sbjct: 241 IRRSPSSRRSQSR 251

The following BLAST results are available for this feature:

BLAST of MELO3C025080.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463144.1	2.1e-169	100.00	PREDICTED: pre-mRNA-splicing factor 38B [Cucumis melo] >XP_008463145.1 PREDICTED...	[more]
XP_011655154.1	1.6e-150	87.30	PREDICTED: pre-mRNA-splicing factor 38B [Cucumis sativus] >XP_011655155.1 PREDIC...	[more]
XP_022993767.1	2.6e-148	82.93	pre-mRNA splicing factor SR-like 1 [Cucurbita maxima]	[more]
XP_022141497.1	4.2e-146	83.81	pre-mRNA splicing factor SR-like 1 isoform X1 [Momordica charantia] >XP_02214149...	[more]
XP_023548529.1	5.3e-141	76.21	pre-mRNA splicing factor SR-like 1 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C025080.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G37370.1	1.1e-113	81.03	PRP38 family protein	[more]

BLAST of MELO3C025080.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RWB1\|SRL1_ARATH	2.1e-112	81.03	Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana OX=3702 GN=SRL1 PE=1 ...	[more]
sp\|Q80SY5\|PR38B_MOUSE	1.9e-41	47.89	Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1	[more]
sp\|Q6AXY7\|PR38B_RAT	1.9e-41	47.89	Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1	[more]
sp\|Q5VTL8\|PR38B_HUMAN	4.2e-41	48.13	Pre-mRNA-splicing factor 38B OS=Homo sapiens OX=9606 GN=PRPF38B PE=1 SV=1	[more]
sp\|Q6P7Y3\|PR38B_DANRE	4.4e-38	47.46	Pre-mRNA-splicing factor 38B OS=Danio rerio OX=7955 GN=prpf38b PE=2 SV=1	[more]

BLAST of MELO3C025080.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CIJ0\|A0A1S3CIJ0_CUCME	1.4e-169	100.00	pre-mRNA-splicing factor 38B OS=Cucumis melo OX=3656 GN=LOC103501359 PE=4 SV=1	[more]
tr\|I1MBS7\|I1MBS7_SOYBN	8.0e-130	90.51	Uncharacterized protein OS=Glycine max OX=3847 GN=100793812 PE=4 SV=1	[more]
tr\|I1JHT5\|I1JHT5_SOYBN	1.1e-129	90.48	Uncharacterized protein OS=Glycine max OX=3847 GN=100788237 PE=4 SV=1	[more]
tr\|A0A151S0K7\|A0A151S0K7_CAJCA	8.9e-129	88.93	Pre-mRNA-splicing factor 38B OS=Cajanus cajan OX=3821 GN=KK1_029949 PE=4 SV=1	[more]
tr\|A0A1S3UFS4\|A0A1S3UFS4_VIGRR	2.6e-128	88.54	pre-mRNA-splicing factor 38B OS=Vigna radiata var. radiata OX=3916 GN=LOC1067648...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005037	PRP38

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010226	response to lithium ion
biological_process	GO:0009651	response to salt stress
biological_process	GO:0008150	biological_process
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0071011	precatalytic spliceosome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025080.2.1	MELO3C025080.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005037	Pre-mRNA-splicing factor 38	PFAM	PF03371	PRP38	coord: 12..161 e-value: 2.9E-53 score: 180.2
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 1..335
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 320..486
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 407..421
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..488
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 422..436
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 457..479
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..406
None	No IPR available	PANTHER	PTHR23142:SF3	SUBFAMILY NOT NAMED	coord: 1..335 coord: 320..486

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025080.2	CSPI05G13720	Wild cucumber (PI 183967)	cpimedB346
MELO3C025080.2	CmaCh15G007610	Cucurbita maxima (Rimu)	cmamedB286
MELO3C025080.2	CmaCh04G022770	Cucurbita maxima (Rimu)	cmamedB721
MELO3C025080.2	CmoCh04G023810	Cucurbita moschata (Rifu)	cmomedB714
MELO3C025080.2	CmoCh15G007870	Cucurbita moschata (Rifu)	cmomedB272
MELO3C025080.2	Lsi09G009050	Bottle gourd (USVL1VR-Ls)	lsimedB014
MELO3C025080.2	Cp4.1LG13g05370	Cucurbita pepo (Zucchini)	cpemedB184
MELO3C025080.2	Cp4.1LG01g19710	Cucurbita pepo (Zucchini)	cpemedB419
MELO3C025080.2	CsGy5G013630	Cucumber (Gy14) v2	cgybmedB304
MELO3C025080.2	Cla009142	Watermelon (97103) v1	medwmB031
MELO3C025080.2	ClCG01G008650	Watermelon (Charleston Gray)	medwcgB018
MELO3C025080.2	Cla97C01G008890	Watermelon (97103) v2	medwmbB008
MELO3C025080.2	Bhi12G001044	Wax gourd	medwgoB015
MELO3C025080.2	Carg18286	Silver-seed gourd	carmedB0537
MELO3C025080.2	Carg01445	Silver-seed gourd	carmedB0832

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025080.2	Cucumber (Gy14) v2	cgybmedB295
MELO3C025080.2	Cucumber (Chinese Long) v2	cumedB332
MELO3C025080.2	Cucumber (Chinese Long) v3	cucmedB344