Cla009142 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla009142
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Pre-mRNA-splicing factor 38A (AHRD V1 -- C1C1J0_9MAXI); contains Interpro domain(s) IPR005037 PRP38
Location	Chr1 : 23146834 .. 23154223 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTTGACGAGATTTATAACCAAGTTGATCACGTGGAGCCGTGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAACTTACTGTTAAGCAAATGCATGGGCTATTAAAGCATGAGGATTCTCCTTACATCAGAGCGGTAGGTGGAATCCTTTTGACCTTTAATAATCATGTTTATAGTAAAGATGTAAGATATTGTTTTATAGCTTTTCTGTCATGGTCCATCTATTCATTTTTTTTTTTTGTAAATATATAATGTGGTGCATACCAATACAGACCGGAGGGAAATTATTCTGATCTTTTATTAAGAAAATATAGAGCTAGTATTTGTACTCACGTTCACAGTCAATCAACAAAGTTACTGTAGGCAACTTGAGAAACTTAACAGTAACTCATGCTATAAAACAAAGGAAAAATTCCAATGTAAACAGAAACAAACCACATCGTGATGGACATTAAGACTAACAGTCTGACAGCTTGCAATGTGTATATTTTTGAAGAGTTAATTAATTTTCTCCAATGTTGCATGTACTTTTACAATCATTACTGTGCTCTGGAAAAATATTAATATATTATATCTTGTTTGGAACTTAGATTAGTAACGTACAAGTTGGATCAAATATAGCTGATGTAAATGGTTTACTATGGTAATTAGTTAACTTCAGTGTAATTGGGACAACCAGAGGTAGATTTTGAAGTGCATTCTTGAAGTATCTGTTTCATATAGAGGATAGATTGTAATTTTCTTGAGGGCATTCTTGAGCATGATTAGATTCTTTATCTTTTCATCATATTTACATTATAATGCATTTCAGCTTGATCTTTGTTGGTAGAAGTAGTAATCCATGGATCTTCACGTAATCTGGATTGCTAATTGCTTTTGCTTTTGTCTTGTTATTTTCTTTACAAGTTTCTGTTGCGTTTGAGGATTGCTAGTTGATTAATCAGTTTCCATCTGGACTTCTAAATATTTATTTCTCTCAAATTTCGGATGTTCAATGAATAAATAACTTGTTTTTGGAGGTTCTTGGTCATTGTCACCTTGAACAACTACTAATCTAACCTAATTTACTGTTTGAAAATATGTTGGAGACTAGCTCTTCGTATACTGATGTGTTTGGGTTGCTCTCTTTCTAAGTCCTACTTTATTCTATCGCTTCAATTTTGTCCTTTATGGTCTGATGGTTCTGTTGTACTAGAATCATTGGTACCTGATATGAACATTGCTCTTTATCCTCTCCCCAAACACAAGGGAAAAGGAGTCTCTTTGTGAACAGAAAAATTTTCTTCTGCCATCAACGATTCCCCAATTCCCTGCTAAGAAGATTACTAGAGAAGCTTTCCAACTATCCTTATAAAACAATAAAACAGAATAATTGCAAGAAGACCCGAGCCAAAAAGCTTGATCCTGAAGTATGAAGTAAATTAGGTAAAAATTGTCATGAGTTTTCTACATTTTCCTTGAAACATCTGTAGGTTTCTTTTTTATAAAGTGCCCCCAACTGTCGGTTTTATTCTACTTGTATAGTAAAATAGCTGAGTGTTGAATAGTATTATGATGAATTACAAAACTATTTTTCCTTGATATCAAAGCGTTTTTTTCCATAAGCATCTCAAGACATGAAAAATTTATCATTCAAAAGAATAGCATCAGTCATAAAACCTTAACTGCTTTTAAATAATACAGAATGAGAATAGTTTTATGGAATAACTTGCTAGTAATCAGAGTTAGCCCTTAGTTTGTGGAAGTGATTAAGGATCGCTTTTTAGAAGAGGTCAAAATCACCAATGAATATGTCTTGAGAGCTGTTGGTTATTATGGATTTTAGAATGGTAAAATGCTGATACAATAAGCAGAATGTTTGATTAGTTTTAAATGTCTGCTTAAACAATTTTTTCTATGAAAAGAAAGTTTTGCTTGTGATCATACTGCAGTCGGCTTCTCTTTCTTATTCAAATACGGTAATACACCATTTTTGCAAGTCTTCAATTAGGAGCAGAGGTCTCCTCTCTCTTAAATTTATTATTCTGATTTGATAATGGTTGTGCTATTATTTGGATTAGAAATTTTTAGTGAACTTTATATTAGAAATTATTTTGGTATCTTCACTGATATTTGTCTGTTGCCCTTTATGCTAGTTCCTGCATTACTCTATTTCTTTAGTTTATAAAACTGTCTGATACATGCATATGCTTGGTAACATTCTTGCCTTGCTCACCAGATGTTATGAACAAAGGATGAACCTTGTCACTTTGGGTTGCTGTGCCCTTTCTCACACCATAAATTAATAGTGCCTTTGCTTTGCTTAGCAGTTATCTAAGGTTTGAGGTGACCTTTTTTTATTTTTATTTTCTAAAGATACTGAGATTATTTCAGTCTCTTGGATTTATTTATCTGTAAATTGATATTCTTTAATGAGTGCACAATGTTTCCCGTATGAATATTGCATCCTTTTGTTTTATGCTCTTAATAAGGTCTGAATACATCAAAGGAATTAATGTGGTTACTTATATTCTTGCATGCCTCTCTTTCTGCATAATTTATTTTCTTACCTGATAATTATGATGCCTTTATCTGTACGATGTTTAAGAAGTTATGGTTCTAGTGGTATTACACTCGGTTCTGCTACCTCTTGATGAAATTTCTTAAATTATTTTTTCCAGATTGGATTTCTCTACTTGAGATATGTTGCAGACCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGAAGAGGTATGTGATACTGATGCATATATGAGCTTGATTATTATTATTATTTTAATTTTGTGGATTGTTGCTTAAGCATTATGGTTAGGGTGCATGTGTTTCGCTTAAAATTTCCTTTAATGTGACTGTAAGTTGCTTTCTGGTTTCTGCTACCTTCAATGTATGTATATATGCTGATAATTTAGTAAGTGCAGACTGATTTTCTATATTATTGAGATGTCATATATGCTTGTGAAGGTATTTGAACTTGAGGCCGTTGATAGTTTCTAACCTAGGAATTATTCAATGTCCTTTTATTCGACTTTCTTCTGCAACCCCTTCTTTTGGGGGGCATTCACATGACCCATCCTTTGGAGAAGGGACACCTTTTCCCTTTGTCTGTTAGGCTGTTTTGGCTGGATTGGTGCCGTTTGAGTGAAGTTTAATGTAAATTACAAAAGAGGCACTAGCGTCCATATGATTTATAAAACATATTGCTAATAAGCTGAGAGAGAAGTAAGGCTATGGTCTCAAAAAGAGGGGAGAATTTACATCAAGTGAGAGCGAGAACAATATAAGTTAGGTGTTAAAGAAAGAGTCAAAATTTGTAGCTTTTTCCTTGAAGATGTGATGGTTTCATTGGGTGGGGGGTGTATGGAGAGGTCAGTAAAGGTACTGATAAGTAAGGGGCACAAGGCTTTTGGAGACTCCTTTGGCATGTATTGTGGGTTCCAAAAAGGTAAGAGGTAACTCCGGCGGCTTTGGCTTTGGGCAGTTGACATCAGCAATGTGACCAACGGAGTAGCCTAGTCTTCATTGAAGTTTAACTTTTTCGTACCTGGAAAAAATTTGACTTCCTACTACAAAAGTTGGAATTCACTGTGCATGATGAATGTATTTCCAACGTTTCTTCTCTGGCATGAGTTTATTTGTGGTATTTTGTTGATTATCAATTGCTTTGAGTGATAAGTGCATTAAATAGTCCACCGCTGAACTCTAAGATACTTGCCTCTTGGTGAATGAGAAGTCTTTTATGGGGTTCTTATCTTTGTTTCATCATCCTGAATTCACCACCGGTTGGTCTTTTGTTTGGAAACCCAAAGTCCTCATTATTCGTGGCTTTTACTATTGCTGGTAATGTTTGACCTGTTGATATCAAGATCATCAATGAGTAATCCTGCTGTTCTCTTTAATTGTCACACAGTTGGCTTCAAAGTTCGAAATTCTCTTCGACGCTTCTTTTGGTCTGGAATTCGAAGGGGTCTTTCCTCTTTGATGAGTTGGATTGTTAAGATATCCATGACATTTTAAGTTCTTTGCTTGGCAAGTTTTGCATGGAAAAGTGAACGTCCAAAACCATCTCAAGAGATTTTTCCCTTGTGATGCACGTGCAATGCACGTTCTCTATGGCCAGTTAGAAGAGGATCTTGAACATTTTTTGTGAGGTTGCTAGTTTGCTTATTCCCTTGGAGTCGATGCTTGAAGTTGTTTGGGATTTGTTTGGCTCTTAGCAAAAATTGCAGCTTTATGATTGAGGAGGCTCTCTTGAACTTTCCCTTTTAGAATAAGTGTAGCATTCTGTGGCATGGATTTTTTGTTTTTGCTAGTTTTTGCGGAATTTGGCTAGTGATGAAAAGTAGGATTTATTGAGGGGTGAATAGATCCTGGGAGGAGGTTGCTAGGTTTAATGCTTTTTTATGGGCGTTCACTACTTAAGCTTTTGTAATTACTAACCTCTTATTCTTTTGGATTGGAGGCTCTTCTTGTAGTTATTGTTAGGATGTTTTTATGGCTTTTTTCCTTGTACTTCTTTCATTTTTATAGAATGAAAGTTTGGTTTCTTATAAACAAAAATCTTAGCCAGTTTTTCCTAGGGATGGTTTGTGGTAAGTGGGATTTGGAAGTGTATATTCTCTTGCCTCCTTTTGGGCCTTTCCAGTAAACACCCTTTACATTGTTCTACAGAGCTCGTATAGTCTATCAGAGAAATCTTTTGTTACTCCTTTGGTTTGGGATCAGGGATCCTACCTTTTTTTAGTAAATTTCACATCAGAGGAATTTGTTTCTTTTATAAAAAAGGAAAGTAAACAGCATTTTTCATGTCTTTTTTCATTTGTTGGTTGTAGTCCTTTTCCCCTTCCGACAAATATCAGAAAATAAAATTCTTCCTTACAAATCTATGGTGTTTTGCATGTTTCATTTTTAATGGATTTAATAAGAATCTAAAACTATTTTTAATTGAATTAATAAGAATCTAAAGCTATAAAAGGCAGAAAAAGAACTAACAGACTTATCACTTATGTGTTTCAGGAATTTTCACCAGGATCCCATGGACGTATGGCTACAATGGGTGTTTATGTTCGTGATTTGCTCCTTGGACAGGTCAGGTTATATACCAAACATTTTCCCCTTAATTATCTTGTTTATTGCTCATATCTTTCTTTTTTTCTTTCCTTTTTAACATCCTTGCGTCACAGACATGATAAGTTGTGTGTATATACAGTTGCTGTTGGCATTTCTCTAGTGTTTAACCATGGGAACGCTGCATTATTGATTCATGGTTGGAAGATATTGTTAAGAGTTGTATATAGAGTATAATATAGTTAAAAGATTTTCATCAAGAGACAAGAAGATGCAAAAAGGTTCAAGAAAAGAACTACAGCATAACAGTAACCTTTCCCTCCCGATTTAAGTAATTAGGTCCTTGTTTCCATTAAACCATCTCATATTTTGTTGGTTTATCATGGTGATTCGAAGCCATGTTCTCTGGCATGAGCTGGTGAAGTTGACTTCACAATGTGCCGTTTGGTGTCTTGTCCACTTTATTGTTGTCTTCATTTTTGTTATTTGTCTTTTCCAATGTATCCAGTATTTTTCTTAACTTTCCTTATATAACCTTTTCTTGTAGTTCTATTTCCCACTTATGCTCCTTGTAGACTAGAAGGAGCCTTTTACATGAAGTATGGTTGTGTTGGCTTTTACCTGAGATACCCTCCAGAGCTCTGCCCCTTCATGAACTTTCCTTACACTATTTCAAAATCCAGATCATGAATAAAATGCTTTATGGAATGTTCTTGAAATATTTAAATCAATCATTGTTTGGGTTCGATTGTTGCTCTGTTGTAGTATATGGTGAAAAGAGATGAATCAAGTGTATAAGATGAACAAAATAAAATATGAGACCAAGGTTTTGATTTTATCACATTGTTGTTATCTAGAAGTGGTTTAACTCATGTGAACAGCCCTCAATACCTTTTCTTTGTTCAGCCATAGCCGCACAACTATTCGAGCATAGGAGCAAACTGAAATGTTGTGTGTTTTAATGCTTAATCAGTAGAAAGCTGATGTAAATCTTGATATCCATGTATGGGTTTCATTTGGCCAACCGAGCGGAATGATAGTTAAGCTTTTATTTTATTTGTTTTTTTAGCTTTTAAACGGCAAAAATTGTGTTTGGTGTTATCTGGTAGTATTAATGTTTCTATTATGTCTGCCAACAAACGGAATGATCATTATTCCACATGTTTAAACTGGAACATATGAAACACATATCTGCCTTTAGACATATTATTATTGTTATTTTTGAATCCTCGTCCTTGTAGCTAAGCAGGTACCCACATTTTGTTTGCCAATTGCAGTATTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTCGAAAAGTTGAAGCTTCCAAGCAAGCATTCAGGTGTGACTGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGCCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGACTCATCTCCTGTTCGTCGTACACTGCCACCATCCGTTAATGATAGAGATATCAGTGATGATCTACGAAGATCCCCAAGCAGTCGCCGTAGTCAAAGCCGTGAACATCCAGATAGTAGAGAGAGGAGCAGGGATAGAGATTATGATAGGGAGAGGAGCAGGGATAGAGATCACGACAGGGAGAGGGACAGAGGAAGGGATAGGGACCGAGATCGAGAACATGATCGGGACAGGGAGAAGTACAGAGATCGGGAGAGGGACCGAGATAGAGAAAGAGAGAGAGCTAGGGATAGGGAAAGGGACAGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATACCGATAGAGAGAGTAGAAGGGACTTTGAAAGGAGTAGCCGTGATGGTGGCTCCAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGGAGCAGAAGTCGAAGTCTACAAACAGGGAATGCCCATCACGAGCGAGAGCCAAGTCCTGCAAGGGGCGGAACTACAGAGAAGACGTCCATCATATCGAGCAATCTGGCGAAACTAAAAGATATCTATGGCGATGTGAGCGAGCAGAAAGGGGATTCGAGCAGAGAAAGAGTTAATAGAAGAGATAGTAGTGGCGAAGAAGTGATTAGACTGGGTGGATCCTGGAAATAG

mRNA sequence

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTTGACGAGATTTATAACCAAGTTGATCACGTGGAGCCGTGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAACTTACTGTTAAGCAAATGCATGGGCTATTAAAGCATGAGGATTCTCCTTACATCAGAGCGATTGGATTTCTCTACTTGAGATATGTTGCAGACCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGAAGAGGAATTTTCACCAGGATCCCATGGACGTATGGCTACAATGGGTGTTTATGTTCGTGATTTGCTCCTTGGACAGTATTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTCGAAAAGTTGAAGCTTCCAAGCAAGCATTCAGGTGTGACTGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGCCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGACTCATCTCCTGTTCGTCGTACACTGCCACCATCCGTTAATGATAGAGATATCAGTGATGATCTACGAAGATCCCCAAGCAGTCGCCGTAGTCAAAGCCGTGAACATCCAGATAGTAGAGAGAGGAGCAGGGATAGAGATTATGATAGGGAGAGGAGCAGGGATAGAGATCACGACAGGGAGAGGGACAGAGGAAGGGATAGGGACCGAGATCGAGAACATGATCGGGACAGGGAGAAGTACAGAGATCGGGAGAGGGACCGAGATAGAGAAAGAGAGAGAGCTAGGGATAGGGAAAGGGACAGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATACCGATAGAGAGAGTAGAAGGGACTTTGAAAGGAGTAGCCGTGATGGTGGCTCCAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGGAGCAGAAGTCGAAGTCTACAAACAGGGAATGCCCATCACGAGCGAGAGCCAAGTCCTGCAAGGGGCGGAACTACAGAGAAGACGTCCATCATATCGAGCAATCTGGCGAAACTAAAAGATATCTATGGCGATGTGAGCGAGCAGAAAGGGGATTCGAGCAGAGAAAGAGTTAATAGAAGAGATAGTAGTGGCGAAGAAGTGATTAGACTGGGTGGATCCTGGAAATAG

Coding sequence (CDS)

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTTGACGAGATTTATAACCAAGTTGATCACGTGGAGCCGTGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAACTTACTGTTAAGCAAATGCATGGGCTATTAAAGCATGAGGATTCTCCTTACATCAGAGCGATTGGATTTCTCTACTTGAGATATGTTGCAGACCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGAAGAGGAATTTTCACCAGGATCCCATGGACGTATGGCTACAATGGGTGTTTATGTTCGTGATTTGCTCCTTGGACAGTATTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTCGAAAAGTTGAAGCTTCCAAGCAAGCATTCAGGTGTGACTGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGCCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGACTCATCTCCTGTTCGTCGTACACTGCCACCATCCGTTAATGATAGAGATATCAGTGATGATCTACGAAGATCCCCAAGCAGTCGCCGTAGTCAAAGCCGTGAACATCCAGATAGTAGAGAGAGGAGCAGGGATAGAGATTATGATAGGGAGAGGAGCAGGGATAGAGATCACGACAGGGAGAGGGACAGAGGAAGGGATAGGGACCGAGATCGAGAACATGATCGGGACAGGGAGAAGTACAGAGATCGGGAGAGGGACCGAGATAGAGAAAGAGAGAGAGCTAGGGATAGGGAAAGGGACAGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATACCGATAGAGAGAGTAGAAGGGACTTTGAAAGGAGTAGCCGTGATGGTGGCTCCAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGGAGCAGAAGTCGAAGTCTACAAACAGGGAATGCCCATCACGAGCGAGAGCCAAGTCCTGCAAGGGGCGGAACTACAGAGAAGACGTCCATCATATCGAGCAATCTGGCGAAACTAAAAGATATCTATGGCGATGTGAGCGAGCAGAAAGGGGATTCGAGCAGAGAAAGAGTTAATAGAAGAGATAGTAGTGGCGAAGAAGTGATTAGACTGGGTGGATCCTGGAAATAG

Protein sequence

MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRERDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRTHYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGGSWK

Homology

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BLAST of Cla009142 vs. Swiss-Prot
Match: PR38B_HUMAN (Pre-mRNA-splicing factor 38B OS=Homo sapiens GN=PRPF38B PE=1 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.1e-72
Identity = 182/463 (39.31%), Postives = 241/463 (52.05%), Query Frame = 1


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRGP- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  --------STAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA+GF+Y+RY   P  LW+W
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW 177

Query: 134 FEPYVKDEEEFS-PGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLK 193
           FE ++ DEE+       G + T+G  +R  L    +F TLFPRIPVPV + +   ++   
Sbjct: 178 FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRP 237

Query: 194 LPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVN 253
              K  G  G    I      RR  S + SLS    +R+P R+ +R  S  R     S  
Sbjct: 238 RKIKKDGKEG-AEEIDRHVERRRSRSPRRSLS---PRRSPRRSRSR--SHHREGHGSSSF 297

Query: 254 DRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRERDRGRD-----RD 313
           DR++  +  R    R ++ RE    R RS DR  +R RSR R+  R R R RD     RD
Sbjct: 298 DRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRD 357

Query: 314 RDREHDRDREKYRDRERDRDRERERARDRERDRDRERS---------------YDYDRRT 373
           RDRE +++ E+ R R+RD D+ER   R++ER+R RERS                D D R 
Sbjct: 358 RDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRR 417

Query: 374 HYTDRESRRDFERSSRDGGSRHYRRSRSRSRS---RSRSRSLQTGNAH----HEREPSPA 430
           H  D+   +  ++ SR        RSRSRSR+   RSRSRS +  + H     E+    +
Sbjct: 418 HRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRS 477

HSP 2 Score: 57.0 bits (136), Expect = 6.1e-07
Identity = 35/119 (29.41%), Postives = 54/119 (45.38%), Query Frame = 1


Query: 190 SEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDDLRRSPSSRR 249
           S   +R       S S + G+R+  R+  + S     +   S N R  S    R+ S  +
Sbjct: 426 SRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKS-NKRSRSGSQGRTDSVEK 485

Query: 250 SQSREHPDSRERSRDRDYDRERSRDRDHDRERDRGRDRDRDREHDRDREKYRDRERDRD 309
           S+ REH  S+E+SR R   +ERS  RDH   +D+    DR R    ++E    + +++D
Sbjct: 486 SKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQHKNKD 543

HSP 3 Score: 49.7 bits (117), Expect = 9.7e-05
Identity = 38/167 (22.75%), Postives = 72/167 (43.11%), Query Frame = 1


Query: 170 EKLKLPSKHSGVTGETHRIGSEDTA----RRPPSVKASLSVSFGQRAPHRASTRDSSPVR 229
           E+ K       V  + H+   +D      +R    +   S S  +   HR+ +R  +  +
Sbjct: 387 ERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGK 446

Query: 230 RTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERS--RDRDYDRERSRDRDHD--RER 289
           R+   S          +   S  +++S+E  + R RS  + R    E+S+ R+H   +E+
Sbjct: 447 RSRSRS----------KEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEK 506

Query: 290 DRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYD 329
            R R R ++R H RD    +D+    DR R ++ ++E    + ++ D
Sbjct: 507 SRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQHKNKD 543

HSP 4 Score: 49.7 bits (117), Expect = 9.7e-05
Identity = 31/137 (22.63%), Postives = 59/137 (43.07%), Query Frame = 1


Query: 214 HRASTRDSSPVRRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSR 273
           HR   RDS   ++       +R      R   + +RS+SR    S  + ++   ++   R
Sbjct: 412 HRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKS-SKHKNESKEKSNKR 471

Query: 274 DRDHDRERDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRT 333
            R   + R    ++ + REH   +EK     R R R +ER+  R+    +++S  +DRR 
Sbjct: 472 SRSGSQGRTDSVEKSKKREHSPSKEK----SRKRSRSKERSHKRDHSDSKDQSDKHDRRR 531

Query: 334 HYTDRESRRDFERSSRD 351
             +  +  ++ +  ++D
Sbjct: 532 SQSIEQESQEKQHKNKD 543

[Close]

BLAST of Cla009142 vs. Swiss-Prot
Match: PR38B_RAT (Pre-mRNA-splicing factor 38B OS=Rattus norvegicus GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 7.0e-72
Identity = 181/451 (40.13%), Postives = 238/451 (52.77%), Query Frame = 1


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRGP- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  --------STAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA+GF+Y+RY   P  LW+W
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW 177

Query: 134 FEPYVKDEEEFS-PGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLK 193
           FE ++ DEE+       G + T+G  +R  L    +F TLFPRIPVPV + +   ++   
Sbjct: 178 FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRP 237

Query: 194 LPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVN 253
              K  G  G    I      RR  S + SLS    +R+P R+ +R  S  R     S  
Sbjct: 238 RKIKKDGKEG-VEEIDRHIERRRSRSPRRSLS---PRRSPRRSRSR--SHHRDGHGSSSF 297

Query: 254 DRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRERDRGRDRD---RD 313
           DR++  +  R    R ++ RE    R RS DR  DR RSR R+  R R R RDR    RD
Sbjct: 298 DRELEREKERQRLEREAKEREKERRRSRSLDRGLDRRRSRSRERHRSRSRSRDRKGDRRD 357

Query: 314 REHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRT--------HYTDRESRR 373
           R+ +R++E  R R RDRD +++R  DRERDR+R R    ++R+        H  D+E RR
Sbjct: 358 RDREREKENERGRRRDRDYDKDRGNDRERDRERSRERSKEQRSRGEGEEKKHKEDKEDRR 417

Query: 374 DFERSSRDGGSRHYRRSRSRSRS-RSRSRSLQTGNAHHEREPSPA---RGGTTEKTSIIS 430
              R  +    + + RSRSR R  RSRSRS   G     R    A   +  + EK++  S
Sbjct: 418 --HRDDKKESKKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKDKASKHKNESKEKSNKRS 477

HSP 2 Score: 47.0 bits (110), Expect = 6.3e-04
Identity = 41/158 (25.95%), Postives = 64/158 (40.51%), Query Frame = 1


Query: 170 EKLKLPSKHSGVTGE----THRIGSEDTARRPPSV--KASLSVSFGQRAPHRASTRDSSP 229
           E+ +  SK     GE     H+   ED   R      K   S S  +   HR+ +R  + 
Sbjct: 383 ERSRERSKEQRSRGEGEEKKHKEDKEDRRHRDDKKESKKKHSRSRSRERKHRSRSRSRNA 442

Query: 230 VRRTLPPSVNDRDISDDLRRSPSSRRSQS-------------REHPDSRERSRDRDYDRE 289
            +R+   S +      +  +  S++RS+S             REH  SRE+SR R   ++
Sbjct: 443 GKRSRSRSKDKASKHKNESKEKSNKRSRSGSQGRTGSVEKRKREHSPSREKSRKRSRSQD 502

Query: 290 RSRDRDHDRERDRGRDRDRDREHDRDREKYRDRERDRD 309
           RS  RDHD  +D+   +D  R    + E      +++D
Sbjct: 503 RSHKRDHD-SKDQSDRQDHQRSQSVEPESQEKEHKNKD 539

HSP 3 Score: 47.0 bits (110), Expect = 6.3e-04
Identity = 34/111 (30.63%), Postives = 51/111 (45.95%), Query Frame = 1


Query: 235 RDISDDLRRSPSSRRSQSREHPDSRERSRDRDYD-RERSRDRD----HDRE-RDRGRDRD 294
           RD   + ++  S  RS+ R+H   R RSR R+   R RSR +D    H  E +++   R 
Sbjct: 413 RDDKKESKKKHSRSRSRERKH---RSRSRSRNAGKRSRSRSKDKASKHKNESKEKSNKRS 472

Query: 295 RDREHDRD-----REKYRDRERDRDRERERARDRERDRDRERSYDYDRRTH 335
           R     R      R++     R++ R+R R++DR   RD +     DR+ H
Sbjct: 473 RSGSQGRTGSVEKRKREHSPSREKSRKRSRSQDRSHKRDHDSKDQSDRQDH 520

[Close]

BLAST of Cla009142 vs. Swiss-Prot
Match: PR38B_MOUSE (Pre-mRNA-splicing factor 38B OS=Mus musculus GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 7.0e-72
Identity = 181/457 (39.61%), Postives = 242/457 (52.95%), Query Frame = 1


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRGP- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 59  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 118

Query: 74  --------STAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA+GF+Y+RY   P  LW+W
Sbjct: 119 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW 178

Query: 134 FEPYVKDEEEFS-PGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLK 193
           FE ++ DEE+       G + T+G  +R  L    +F TLFPRIPVPV + +   ++   
Sbjct: 179 FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRP 238

Query: 194 LPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVN 253
              K  G  G    I      RR  S + SLS    +R+P R+ +R  S  R     S  
Sbjct: 239 RKIKKDGKEG-IEEIDRHVERRRSRSPRRSLS---PRRSPRRSRSR--SHHREGHGSSSF 298

Query: 254 DRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRERDRGRDRD---RD 313
           DR++  +  R    R ++ RE    R RS DR  DR RSR R+  R R R RDR    RD
Sbjct: 299 DRELEREKERQRLEREAKEREKERRRSRSIDRGLDRRRSRSRERHRSRSRSRDRKGDRRD 358

Query: 314 REHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRT--------HYTDRESR- 373
           R+ +R++E  R R RDRD ++ER  DRERDR+R R    ++R+        H  D+E R 
Sbjct: 359 RDREREKENERGRRRDRDYDKERGSDRERDRERSRERSKEQRSRGDGEEKKHKEDKEDRR 418

Query: 374 -RDFERSSRDGGSR-------HYRRSRS---RSRSRSRSRSLQTGNAHHEREPSPARGGT 428
            RD ++ S+   SR       H  RSR+   RSRSRS+ +S +  N   E+    +R G+
Sbjct: 419 HRDDKKESKKKHSRSRSRERKHRSRSRNAGKRSRSRSKDKSSRHKNESKEKANKRSRSGS 478

HSP 2 Score: 55.5 bits (132), Expect = 1.8e-06
Identity = 41/171 (23.98%), Postives = 68/171 (39.77%), Query Frame = 1


Query: 234 DRDISDDLRRSPSSRRSQSREHP---DSRERSRDRDYDRERSRDRDHDRERDRGRDRDRD 293
           D++   D  R     R +S+E     D  E+    D +  R RD   + ++   R R R+
Sbjct: 372 DKERGSDRERDRERSRERSKEQRSRGDGEEKKHKEDKEDRRHRDDKKESKKKHSRSRSRE 431

Query: 294 REH--------DRDREKYRD---RERDRDRERERARDRERDRDRERSYDYDRRTHYTDRE 353
           R+H         R R + +D   R ++  +E+   R R   + R  S +  +R H   RE
Sbjct: 432 RKHRSRSRNAGKRSRSRSKDKSSRHKNESKEKANKRSRSGSQGRTGSVEKRKREHSPSRE 491

Query: 354 SRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGT 391
             R   RS      R +  S+ +S  R   +S Q+G    + +   ++  T
Sbjct: 492 KSRKRSRSQDRSHKREHNDSKDQS-DRQDHQSSQSGEPESQEKEHKSKDET 541

HSP 3 Score: 43.9 bits (102), Expect = 5.3e-03
Identity = 32/136 (23.53%), Postives = 53/136 (38.97%), Query Frame = 1


Query: 186 HRIGSEDTARRPPSV--KASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDDLRR 245
           H+   ED   R      K   S S  +   HR+ +R++    R+     + R  ++   +
Sbjct: 404 HKEDKEDRRHRDDKKESKKKHSRSRSRERKHRSRSRNAGKRSRSRSKDKSSRHKNESKEK 463

Query: 246 SPSSRRSQS-----------REHPDSRERSRDRDYDRERSRDRDHDRERDRGRDRDRDRE 305
           +    RS S           REH  SRE+SR R   ++RS  R+H+  +D+   +D    
Sbjct: 464 ANKRSRSGSQGRTGSVEKRKREHSPSREKSRKRSRSQDRSHKREHNDSKDQSDRQDHQSS 523

Query: 306 HDRDREKYRDRERDRD 309
              + E      + +D
Sbjct: 524 QSGEPESQEKEHKSKD 539

HSP 4 Score: 34.3 bits (77), Expect = 4.2e+00
Identity = 31/124 (25.00%), Postives = 50/124 (40.32%), Query Frame = 1


Query: 170 EKLKLPSKHSGVTGET--HRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVR-R 229
           +K +   KHS        HR  S +  +R  S     S      +  +A+ R  S  + R
Sbjct: 416 DKKESKKKHSRSRSRERKHRSRSRNAGKRSRSRSKDKSSRHKNESKEKANKRSRSGSQGR 475

Query: 230 TLPPSVNDRDISDDL----RRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRERD 287
           T       R+ S       +RS S  RS  REH DS+++S  +D+   +S + +   +  
Sbjct: 476 TGSVEKRKREHSPSREKSRKRSRSQDRSHKREHNDSKDQSDRQDHQSSQSGEPESQEKEH 535

[Close]

BLAST of Cla009142 vs. Swiss-Prot
Match: PR38B_DANRE (Pre-mRNA-splicing factor 38B OS=Danio rerio GN=prpf38b PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.9e-65
Identity = 170/465 (36.56%), Postives = 231/465 (49.68%), Query Frame = 1


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRGP- 73
           L  ++  N+LSS YFK +LY LKTYHEVVDEIY +V+HVEPW          TG C G  
Sbjct: 36  LNPMILTNVLSSPYFKVQLYELKTYHEVVDEIYFKVNHVEPWEKGSRKTAGQTGMCGGVR 95

Query: 74  --------STAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSP IRA+GF+Y+RY   P  L +W
Sbjct: 96  GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHSDSPDIRALGFMYIRYTQPPPDLVDW 155

Query: 134 FEPYVKDEEEFS-PGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKL- 193
           ++ ++ DEEE       G + T+G  +R  L    +F TLFPRIPVPV + +  +++   
Sbjct: 156 YDEFLDDEEELDVKAGGGCVMTVGEMLRSFLTKLEWFSTLFPRIPVPVQKAIDQHMKSRP 215

Query: 194 -KLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPS 253
            K P K             E+      +  A+ +   G +   R   R  SP +      
Sbjct: 216 RKPPQKDE----------QEEEEEEATAAPAADTGRHGDKRRSRTPRRSPSPRKS----Q 275

Query: 254 VNDRDISDDLRRSPSS-------RRSQSREHPDSRERSRDRDYDRERSRDRDHDRERDRG 313
              R  S    R  +S        R + R+  + ++R RDRD DRER R+RD DR R R 
Sbjct: 276 NRSRSRSHHRERHGASFDYELERERDRQRKEREGKDRDRDRDRDRERDRERDRDRRRSRT 335

Query: 314 RDRDRDREHDRDREKYRDRERDRDRERERA---RDRERDRDRERSYDYDRRTHYTDRESR 373
            DR+ +R   R RE+ R R   RD+  ER    +DRE + +RERS   DR  H+ DRE  
Sbjct: 336 PDRNAERRRSRSRERRRSRSTSRDKRTERKDRDKDREAESERERSRKKDRE-HHKDRERS 395

Query: 374 RDFERSSRDGGSRHY-------------RRSRSRSRSRSRSRSLQTGNAHHEREPSPARG 433
           +D +RS  +G  R +             R  RSRSRSR R    +  +    R  S +R 
Sbjct: 396 KD-KRSKGEGEERRHKDDKEEKKHREEKRSKRSRSRSRDRKHKAERSSKKRSRSGSRSRQ 455

[Close]

BLAST of Cla009142 vs. Swiss-Prot
Match: FRAY2_DICDI (Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.5e-29
Identity = 101/262 (38.55%), Postives = 135/262 (51.53%), Query Frame = 1


Query: 167 SNLEKLKLPS--KHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRAST----RD 226
           S L K   PS  K +  T ++++  S  ++R     ++S S S    +   +S     R 
Sbjct: 655 SALSKPPSPSSDKENNSTSKSNKSKSRQSSRASSLSESSDSTSHTSSSDEHSSRYESDRK 714

Query: 227 SSPVRRTLPPSVN---------DRDISDDLRRSPSSRR-SQSREHP-DSRERSRDRDYDR 286
           S   +++   S N         DRD S+   ++  SR  S+ RE   D   RSRDRD +R
Sbjct: 715 SYKKKKSSSSSSNSKRDRERERDRDRSNKTYKNSRSRNVSRDRERERDRHNRSRDRDRER 774

Query: 287 ERSRDRDHDRERDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDY 346
           ER RDRD +R+RDR RDR RDR  DR+R++ RDR RDRDR R+R+RDR R+RDR+RS D 
Sbjct: 775 ERERDRDRERDRDRSRDRSRDRSRDRERDRSRDRSRDRDRSRDRSRDRSRERDRDRSRDR 834

Query: 347 DR-RTHYTDRESR---RDFERS------SRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHH 402
            R R+   D +SR   RD  RS      SR   SR+  R RS    RSR RS        
Sbjct: 835 SRDRSRSRDSDSRDRSRDRSRSHSNRRRSRSRDSRNKSRDRSSDSDRSRDRSRDRDYKSS 894

HSP 2 Score: 96.3 bits (238), Expect = 9.0e-19
Identity = 79/235 (33.62%), Postives = 106/235 (45.11%), Query Frame = 1


Query: 173 KLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSV 232
           K  S  S    +  R    D  R   + K S S +  +         + S  R       
Sbjct: 718 KKKSSSSSSNSKRDRERERDRDRSNKTYKNSRSRNVSRDRERERDRHNRSRDRDRERERE 777

Query: 233 NDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRERDRGRDRDRDRE 292
            DRD   D  RS    R +SR+    R+RSRDR  DR+RSRDR  DR R+R RDR RDR 
Sbjct: 778 RDRDRERDRDRSRDRSRDRSRDR--ERDRSRDRSRDRDRSRDRSRDRSRERDRDRSRDRS 837

Query: 293 HDRDREK---YRDRERDRDR---ERERARDRE-RDRDRERSYDYDRRTHYTDRESRRDFE 352
            DR R +    RDR RDR R    R R+R R+ R++ R+RS D DR     DR   RD++
Sbjct: 838 RDRSRSRDSDSRDRSRDRSRSHSNRRRSRSRDSRNKSRDRSSDSDRS---RDRSRDRDYK 897

Query: 353 RSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSN 401
            S     SR     R  ++ +S+  S  T  ++ E + S       ++  + +SN
Sbjct: 898 SSKYKKSSRG-TSGRKNNKIQSKLDSQATHISYLEDKISTLTNWLQQQNLLNTSN 946

[Close]

BLAST of Cla009142 vs. TrEMBL
Match: F6HI04_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0043g00270 PE=4 SV=1)

HSP 1 Score: 691.0 bits (1782), Expect = 9.2e-196
Identity = 350/461 (75.92%), Postives = 393/461 (85.25%), Query Frame = 1


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEI+T GKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRY  DPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAGDPKTLWNWFEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DEEEFSPGS GRM TMG YVRDLLLGQYYFDTLFPRIPVP++RQ+V+NLEK+KLPSKH+G
Sbjct: 121 DEEEFSPGSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMRQIVANLEKMKLPSKHAG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTL--PPSVNDRDIS 240
           VTG+T R GS+DTARRPPSVKA+LSVSFGQRAPHRASTRDSSPVRRTL  PP   DR+ S
Sbjct: 181 VTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRNSS 240

Query: 241 DDLRRSPSSRRSQSREHPD------------SRERSRDRDYDRERSRDRDHDRERDRGRD 300
           DDLRRSPSSRRSQSRE  D            SRE  RDRD+DRER R+RD  R RD+ RD
Sbjct: 241 DDLRRSPSSRRSQSRELSDREYSDRDRDRGKSRELDRDRDHDRERDRERDRTRNRDKDRD 300

Query: 301 R--DRDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRTHYTDRESRRDF 360
           R  DRDR+ D+DR++ RDR+RDRD++++R RDRER+RDR+R +DYDRR+ YT+RESRRD+
Sbjct: 301 RAMDRDRDRDKDRDRDRDRDRDRDKDKDRDRDRERERDRDRRHDYDRRSKYTERESRRDY 360

Query: 361 ERSSRDGGSRHYRRS---RSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNL 420
           +RSSRD GSR+ R +   RSRSRSRSRS+SLQ  N H +   SP   G+ EKTS  S+NL
Sbjct: 361 DRSSRD-GSRYNRETSSRRSRSRSRSRSQSLQARNDHIDHRSSPLADGSKEKTS-ASANL 420

Query: 421 AKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGG-SWK 442
           AKL+D+YGD  +QKG S+ ER +RRD+SGEEVIRLGG SWK
Sbjct: 421 AKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGSSWK 459

[Close]

BLAST of Cla009142 vs. TrEMBL
Match: A0A0S3RL76_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G098000 PE=4 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 1.2e-195
Identity = 346/455 (76.04%), Postives = 389/455 (85.49%), Query Frame = 1


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEI+TCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRY  DPKTLW+WFEPY+K
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCGDPKTLWSWFEPYIK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DEEEFSPGS+GRM TMGVY+RDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLP+ HSG
Sbjct: 121 DEEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPTTHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
            TGE+ R GS+DTARRPPSVKA+LSVSFGQRAPHRASTRDSSP+RRTLP   ++R+ SDD
Sbjct: 181 STGESTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPS--HERNGSDD 240

Query: 241 LRRSPSSRRSQSREHPD---SRERSRDRDYDRERSRDRDHDRERDRGRDRDRDR------ 300
           +RRSPSSRRSQSRE+PD    RERSR RD DR+  RDRD +RERDR R+RDRDR      
Sbjct: 241 IRRSPSSRRSQSREYPDRDRDRERSRSRDRDRDHDRDRDRERERDRDRERDRDRYRDRDR 300

Query: 301 ----EHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRTHYTDRESRRDFERS 360
               E DRDRE+YRDR+ DRD+ER+R R R+++R+RERSYDYDRR+ +T+RES RD+   
Sbjct: 301 NREWERDRDRERYRDRDSDRDQERDRIR-RDKERERERSYDYDRRSKHTERESSRDY--- 360

Query: 361 SRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDI 420
             D GSRHYR+SRSRSRSRSRS+S Q G A HE   SP R G+  K +  SSNLAKLKD+
Sbjct: 361 --DNGSRHYRKSRSRSRSRSRSQSQQAGTARHESRSSPPRDGS--KRTSASSNLAKLKDM 420

Query: 421 YGDVSEQKGDSSRERVNRRDSSGEEVIRLGGS-WK 442
           YGD+ + KG+   E++ R+DS GEEVIRLGGS WK
Sbjct: 421 YGDLGDNKGEIRMEKIPRKDSGGEEVIRLGGSTWK 445

[Close]

BLAST of Cla009142 vs. TrEMBL
Match: A0A0L9UWE1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g078200 PE=4 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 1.2e-195
Identity = 346/455 (76.04%), Postives = 389/455 (85.49%), Query Frame = 1


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEI+TCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRY  DPKTLW+WFEPY+K
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCGDPKTLWSWFEPYIK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DEEEFSPGS+GRM TMGVY+RDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLP+ HSG
Sbjct: 121 DEEEFSPGSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPTTHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
            TGE+ R GS+DTARRPPSVKA+LSVSFGQRAPHRASTRDSSP+RRTLP   ++R+ SDD
Sbjct: 181 STGESTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPS--HERNGSDD 240

Query: 241 LRRSPSSRRSQSREHPD---SRERSRDRDYDRERSRDRDHDRERDRGRDRDRDR------ 300
           +RRSPSSRRSQSRE+PD    RERSR RD DR+  RDRD +RERDR R+RDRDR      
Sbjct: 241 IRRSPSSRRSQSREYPDRDRDRERSRSRDRDRDHDRDRDRERERDRDRERDRDRYRDRDR 300

Query: 301 ----EHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRTHYTDRESRRDFERS 360
               E DRDRE+YRDR+ DRD+ER+R R R+++R+RERSYDYDRR+ +T+RES RD+   
Sbjct: 301 NREWERDRDRERYRDRDSDRDQERDRIR-RDKERERERSYDYDRRSKHTERESSRDY--- 360

Query: 361 SRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDI 420
             D GSRHYR+SRSRSRSRSRS+S Q G A HE   SP R G+  K +  SSNLAKLKD+
Sbjct: 361 --DNGSRHYRKSRSRSRSRSRSQSQQAGTARHESRSSPPRDGS--KRTSASSNLAKLKDM 420

Query: 421 YGDVSEQKGDSSRERVNRRDSSGEEVIRLGGS-WK 442
           YGD+ + KG+   E++ R+DS GEEVIRLGGS WK
Sbjct: 421 YGDLGDNKGEIRMEKIPRKDSGGEEVIRLGGSTWK 445

[Close]

BLAST of Cla009142 vs. TrEMBL
Match: A0A0B2S496_GLYSO (Pre-mRNA-splicing factor 38B OS=Glycine soja GN=glysoja_016875 PE=4 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 3.5e-195
Identity = 346/452 (76.55%), Postives = 389/452 (86.06%), Query Frame = 1


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEI+TCG+PIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIQTCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRY ADPKTLWNWFE YVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCADPKTLWNWFESYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSPGS+GRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPS HSG
Sbjct: 121 DDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSTHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
            TGET R GS+DTARRPPSVKA+LSVSFGQRAPHRASTRDSSP+RRTLP   ++++ SDD
Sbjct: 181 STGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPS--HEKNGSDD 240

Query: 241 LRRSPSSRRSQSREHPD-----SRERSRDRDYDRERSRDRDHDRERDRGRDRDRDRE--- 300
           +RRSPS+RRSQSRE+PD      R+RS+ RD DRER RDRD +R+RDR RDRDR+RE   
Sbjct: 241 IRRSPSNRRSQSREYPDRDRDRDRDRSQSRDRDRERDRDRDRERDRDRYRDRDRNREWER 300

Query: 301 -HDRDREKYRDRERDRDRERER-ARDRERDRDRERSYDYDRRTHYTDRESRRDFERSSRD 360
             DRDRE+YRD + +RD++R+R  R+ ER+R+RERSYDYD+R+ YT+RES RD+     D
Sbjct: 301 DRDRDRERYRDHDSERDQDRDRIRRNNERERERERSYDYDKRSKYTERESSRDY-----D 360

Query: 361 GGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGD 420
            GSRHYRRSRSRSRSRSRSRSLQ G   +E   SP R     K +  SSNLAKLKD+YGD
Sbjct: 361 NGSRHYRRSRSRSRSRSRSRSLQAGTGRYESRSSPQR--EESKRTSASSNLAKLKDMYGD 420

Query: 421 VSEQKGDSSRERVNRRDSSGEEVIRLGGS-WK 442
           + + KGD++ ER+ R+DS GEEVIRLGGS WK
Sbjct: 421 LGDSKGDANMERIPRKDSGGEEVIRLGGSTWK 443

[Close]

BLAST of Cla009142 vs. TrEMBL
Match: I1MBS7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G211600 PE=4 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 3.0e-194
Identity = 345/452 (76.33%), Postives = 388/452 (85.84%), Query Frame = 1


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEI+TCG+PIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIQTCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRY ADPKTLWNWFE YVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCADPKTLWNWFESYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSPGS+GRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPS HSG
Sbjct: 121 DDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSTHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
            TGET R GS+DTARRPPSVKA+LSVSFGQRAPHRASTRDSSP+RRTLP   ++++ SDD
Sbjct: 181 STGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTLPS--HEKNGSDD 240

Query: 241 LRRSPSSRRSQSREHPD-----SRERSRDRDYDRERSRDRDHDRERDRGRDRDRDRE--- 300
           +RRSPS+RRSQSRE+PD      R+RS+ RD DRER RDRD +R+RDR RDRDR+RE   
Sbjct: 241 IRRSPSNRRSQSREYPDRERDRDRDRSQSRDRDRERDRDRDRERDRDRYRDRDRNREWER 300

Query: 301 -HDRDREKYRDRERDRDRERER-ARDRERDRDRERSYDYDRRTHYTDRESRRDFERSSRD 360
             DRDRE+YRD + +RD++R+R  R+ ER+R+RER YDYD+R+ YT+RES RD+     D
Sbjct: 301 DRDRDRERYRDHDSERDQDRDRIRRNNERERERERIYDYDKRSKYTERESSRDY-----D 360

Query: 361 GGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGD 420
            GSRHYRRSRSRSRSRSRSRSLQ G   +E   SP R     K +  SSNLAKLKD+YGD
Sbjct: 361 NGSRHYRRSRSRSRSRSRSRSLQAGTGWYESRSSPQR--EESKRTSASSNLAKLKDMYGD 420

Query: 421 VSEQKGDSSRERVNRRDSSGEEVIRLGGS-WK 442
           + + KGD++ ER+ R+DS GEEVIRLGGS WK
Sbjct: 421 LGDSKGDANMERIPRKDSGGEEVIRLGGSTWK 443

[Close]

BLAST of Cla009142 vs. NCBI nr
Match: gi|778702200|ref|XP_011655154.1| (PREDICTED: pre-mRNA-splicing factor 38B [Cucumis sativus])

HSP 1 Score: 848.2 bits (2190), Expect = 6.5e-243
Identity = 418/443 (94.36%), Postives = 429/443 (96.84%), Query Frame = 1


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG
Sbjct: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLP S NDRD +DD
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSANDRDNNDD 240

Query: 241 LRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRERDRGRDRDRDREHDRDREKY 300
           LRRSPS RRSQSREHPDSRERSRDR++DRERSRDRD+DR+RDRGRDRDRDREHDRDREKY
Sbjct: 241 LRRSPSIRRSQSREHPDSRERSRDREFDRERSRDRDYDRDRDRGRDRDRDREHDRDREKY 300

Query: 301 RDRERDRDRERERARDRERD--RDRERSYDYDRRTHYTDRESRRDFERSSRDGGSRHYRR 360
           RDRERDRDRERE+ARDRERD  RDRERSYDYDRRTHY+DRESRRDFERSSRDGG+RHYRR
Sbjct: 301 RDRERDRDREREKARDRERDRERDRERSYDYDRRTHYSDRESRRDFERSSRDGGTRHYRR 360

Query: 361 SRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDS 420
           SRSRSRSRSRSRSLQT   HHEREPSPARGGTTEK S+ISSNLAKLKDIYGDVSEQKGDS
Sbjct: 361 SRSRSRSRSRSRSLQT---HHEREPSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDS 420

Query: 421 SRERVNRRDSSGEEVIRLGGSWK 442
           S  +VNRRD SGEEVIRLGGSWK
Sbjct: 421 S--KVNRRDGSGEEVIRLGGSWK 438

[Close]

BLAST of Cla009142 vs. NCBI nr
Match: gi|659126372|ref|XP_008463149.1| (PREDICTED: pre-mRNA-splicing factor 38B isoform X4 [Cucumis melo])

HSP 1 Score: 830.1 bits (2143), Expect = 1.8e-237
Identity = 420/473 (88.79%), Postives = 430/473 (90.91%), Query Frame = 1


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG
Sbjct: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLP SVNDRDI+DD
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240

Query: 241 LRRSPSSRRSQSREHPDSR----------ERSRDRDYDRERSRDRDHDRE---------- 300
           LRRSPS+RRSQSREHPDSR          ERSRDRDYDRERSRDRD+DRE          
Sbjct: 241 LRRSPSNRRSQSREHPDSRERSRDREYDRERSRDRDYDRERSRDRDYDRERSRDRDYDRE 300

Query: 301 ----------RDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERD--RDRERSYD 360
                     RDRGRDRDRDRE DRDREKYRDRERDRDRERE+ARDRERD  RDRERSYD
Sbjct: 301 RSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRERDRDREREKARDRERDRERDRERSYD 360

Query: 361 YDRRTHYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARG 420
           YDRRTHY+DRESRRDFERSSRDGG+RHYRRSRSRSRSRSR RSLQT   HHERE SPARG
Sbjct: 361 YDRRTHYSDRESRRDFERSSRDGGTRHYRRSRSRSRSRSRGRSLQT---HHEREQSPARG 420

Query: 421 GTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGGSWK 442
           GTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  ++NRRDSSGEEVIRLGGSWK
Sbjct: 421 GTTEKASVISSNLAKLKDIYGDVSEQKGDSS--KINRRDSSGEEVIRLGGSWK 468

[Close]

BLAST of Cla009142 vs. NCBI nr
Match: gi|659126374|ref|XP_008463150.1| (PREDICTED: pre-mRNA-splicing factor 38B isoform X5 [Cucumis melo])

HSP 1 Score: 828.9 bits (2140), Expect = 4.1e-237
Identity = 419/473 (88.58%), Postives = 430/473 (90.91%), Query Frame = 1


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG
Sbjct: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLP SVNDRDI+DD
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240

Query: 241 LRRSPSSRRSQSREHPDSR----------ER--------------------SRDRDYDRE 300
           LRRSPS+RRSQSREHPDSR          ER                    SRDRDYDRE
Sbjct: 241 LRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRDRDYDRERSRDRDYDRE 300

Query: 301 RSRDRDHDRERDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERD--RDRERSYD 360
           RSRDRD+DR+RDRGRDRDRDRE DRDREKYRDRERDRDRERE+ARDRERD  RDRERSYD
Sbjct: 301 RSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRERDRDREREKARDRERDRERDRERSYD 360

Query: 361 YDRRTHYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARG 420
           YDRRTHY+DRESRRDFERSSRDGG+RHYRRSRSRSRSRSR RSLQT   HHERE SPARG
Sbjct: 361 YDRRTHYSDRESRRDFERSSRDGGTRHYRRSRSRSRSRSRGRSLQT---HHEREQSPARG 420

Query: 421 GTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGGSWK 442
           GTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  ++NRRDSSGEEVIRLGGSWK
Sbjct: 421 GTTEKASVISSNLAKLKDIYGDVSEQKGDSS--KINRRDSSGEEVIRLGGSWK 468

[Close]

BLAST of Cla009142 vs. NCBI nr
Match: gi|659126368|ref|XP_008463147.1| (PREDICTED: pre-mRNA-splicing factor 38B isoform X2 [Cucumis melo])

HSP 1 Score: 826.2 bits (2133), Expect = 2.6e-236
Identity = 420/483 (86.96%), Postives = 430/483 (89.03%), Query Frame = 1


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG
Sbjct: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLP SVNDRDI+DD
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240

Query: 241 LRRSPSSRRSQSREHPDSR--------------------ERSRDRDYDRERSRDRDHDRE 300
           LRRSPS+RRSQSREHPDSR                    ERSRDRDYDRERSRDRD+DRE
Sbjct: 241 LRRSPSNRRSQSREHPDSRERSRDREYDRERSRDRDYDRERSRDRDYDRERSRDRDYDRE 300

Query: 301 --------------------RDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERD 360
                               RDRGRDRDRDRE DRDREKYRDRERDRDRERE+ARDRERD
Sbjct: 301 RSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRERDRDREREKARDRERD 360

Query: 361 --RDRERSYDYDRRTHYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAH 420
             RDRERSYDYDRRTHY+DRESRRDFERSSRDGG+RHYRRSRSRSRSRSR RSLQT   H
Sbjct: 361 RERDRERSYDYDRRTHYSDRESRRDFERSSRDGGTRHYRRSRSRSRSRSRGRSLQT---H 420

Query: 421 HEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGG 442
           HERE SPARGGTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  ++NRRDSSGEEVIRLGG
Sbjct: 421 HEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSS--KINRRDSSGEEVIRLGG 478

[Close]

BLAST of Cla009142 vs. NCBI nr
Match: gi|659126370|ref|XP_008463148.1| (PREDICTED: pre-mRNA-splicing factor 38B isoform X3 [Cucumis melo])

HSP 1 Score: 826.2 bits (2133), Expect = 2.6e-236
Identity = 420/483 (86.96%), Postives = 430/483 (89.03%), Query Frame = 1


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG
Sbjct: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLP SVNDRDI+DD
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240

Query: 241 LRRSPSSRRSQSREHPDSR--------------------ERSRDRDYDRERSRDRDHDRE 300
           LRRSPS+RRSQSREHPDSR                    ERSRDRDYDRERSRDRD+DRE
Sbjct: 241 LRRSPSNRRSQSREHPDSRERSRDREYDRERSRDREYDRERSRDRDYDRERSRDRDYDRE 300

Query: 301 --------------------RDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERD 360
                               RDRGRDRDRDRE DRDREKYRDRERDRDRERE+ARDRERD
Sbjct: 301 RSRDRDYDRERSRDRDYDRDRDRGRDRDRDRELDRDREKYRDRERDRDREREKARDRERD 360

Query: 361 --RDRERSYDYDRRTHYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAH 420
             RDRERSYDYDRRTHY+DRESRRDFERSSRDGG+RHYRRSRSRSRSRSR RSLQT   H
Sbjct: 361 RERDRERSYDYDRRTHYSDRESRRDFERSSRDGGTRHYRRSRSRSRSRSRGRSLQT---H 420

Query: 421 HEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGG 442
           HERE SPARGGTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  ++NRRDSSGEEVIRLGG
Sbjct: 421 HEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSS--KINRRDSSGEEVIRLGG 478

The following BLAST results are available for this feature:

BLAST of Cla009142 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PR38B_HUMAN	1.1e-72	39.31	Pre-mRNA-splicing factor 38B OS=Homo sapiens GN=PRPF38B PE=1 SV=1	[more]
PR38B_RAT	7.0e-72	40.13	Pre-mRNA-splicing factor 38B OS=Rattus norvegicus GN=Prpf38b PE=1 SV=1	[more]
PR38B_MOUSE	7.0e-72	39.61	Pre-mRNA-splicing factor 38B OS=Mus musculus GN=Prpf38b PE=1 SV=1	[more]
PR38B_DANRE	2.9e-65	36.56	Pre-mRNA-splicing factor 38B OS=Danio rerio GN=prpf38b PE=2 SV=1	[more]
FRAY2_DICDI	2.5e-29	38.55	Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 ...	[more]

BLAST of Cla009142 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HI04_VITVI	9.2e-196	75.92	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0043g00270 PE=4 SV=...	[more]
A0A0S3RL76_PHAAN	1.2e-195	76.04	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G098000 PE=...	[more]
A0A0L9UWE1_PHAAN	1.2e-195	76.04	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g078200 PE=4 SV=1	[more]
A0A0B2S496_GLYSO	3.5e-195	76.55	Pre-mRNA-splicing factor 38B OS=Glycine soja GN=glysoja_016875 PE=4 SV=1	[more]
I1MBS7_SOYBN	3.0e-194	76.33	Uncharacterized protein OS=Glycine max GN=GLYMA_14G211600 PE=4 SV=1	[more]

BLAST of Cla009142 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778702200\|ref\|XP_011655154.1\|	6.5e-243	94.36	PREDICTED: pre-mRNA-splicing factor 38B [Cucumis sativus]	[more]
gi\|659126372\|ref\|XP_008463149.1\|	1.8e-237	88.79	PREDICTED: pre-mRNA-splicing factor 38B isoform X4 [Cucumis melo]	[more]
gi\|659126374\|ref\|XP_008463150.1\|	4.1e-237	88.58	PREDICTED: pre-mRNA-splicing factor 38B isoform X5 [Cucumis melo]	[more]
gi\|659126368\|ref\|XP_008463147.1\|	2.6e-236	86.96	PREDICTED: pre-mRNA-splicing factor 38B isoform X2 [Cucumis melo]	[more]
gi\|659126370\|ref\|XP_008463148.1\|	2.6e-236	86.96	PREDICTED: pre-mRNA-splicing factor 38B isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005037	PRP38

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0008150	biological_process
biological_process	GO:0010226	response to lithium ion
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0071011	precatalytic spliceosome
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU37250	watermelon EST collection version 2.0	transcribed_cluster
WMU45695	watermelon EST collection version 2.0	transcribed_cluster
WMU52269	watermelon EST collection version 2.0	transcribed_cluster
WMU65335	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla009142	Cla009142.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU37250	WMU37250	transcribed_cluster
WMU52269	WMU52269	transcribed_cluster
WMU45695	WMU45695	transcribed_cluster
WMU65335	WMU65335	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 252..436 score: 3.7E-184coord: 1..229 score: 3.7E
IPR005037	Pre-mRNA-splicing factor 38	PFAM	PF03371	PRP38	coord: 12..161 score: 3.8
None	No IPR available	PANTHER	PTHR23142:SF3	SUBFAMILY NOT NAMED	coord: 252..436 score: 3.7E-184coord: 1..229 score: 3.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla009142	Cla97C01G008890	Watermelon (97103) v2	wmwmbB237
Cla009142	Csa5G348070	Cucumber (Chinese Long) v2	cuwmB412
Cla009142	MELO3C025080	Melon (DHL92) v3.5.1	mewmB026
Cla009142	ClCG01G008650	Watermelon (Charleston Gray)	wcgwmB144
Cla009142	CSPI05G13720	Wild cucumber (PI 183967)	cpiwmB422
Cla009142	CmaCh04G022770	Cucurbita maxima (Rimu)	cmawmB711
Cla009142	CmoCh04G023810	Cucurbita moschata (Rifu)	cmowmB707
Cla009142	CmoCh15G007870	Cucurbita moschata (Rifu)	cmowmB269
Cla009142	Cp4.1LG13g05370	Cucurbita pepo (Zucchini)	cpewmB185
Cla009142	Cp4.1LG01g19710	Cucurbita pepo (Zucchini)	cpewmB441
Cla009142	CsGy5G013630	Cucumber (Gy14) v2	cgybwmB385
Cla009142	MELO3C025080.2	Melon (DHL92) v3.6.1	medwmB031
Cla009142	Carg18286	Silver-seed gourd	carwmB0524
Cla009142	Carg01445	Silver-seed gourd	carwmB0831
Cla009142	CsaV3_5G020660	Cucumber (Chinese Long) v3	cucwmB437
Cla009142	Bhi12G001044	Wax gourd	wgowmB078

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla009142	Cucurbita maxima (Rimu)	cmawmB279
Cla009142	Melon (DHL92) v3.5.1	mewmB032
Cla009142	Bottle gourd (USVL1VR-Ls)	lsiwmB029
Cla009142	Melon (DHL92) v3.6.1	medwmB023