Cla97C01G008890 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G008890
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	pre-mRNA-splicing factor 38B
Location	Cla97Chr01 : 9748821 .. 9756210 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTTGACGAGATTTATAACCAAGTTGATCACGTGGAGCCGTGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAACTTACTGTTAAGCAAATGCATGGGCTATTAAAGCATGAGGATTCTCCTTACATCAGAGCGGTAGGTGGAATCCTTTTGACCTTTAATAATCATGTTTATAGTAAAGATGTAAGATATTGTTTTATAGCTTTTCTGTCATGGTCCATCTATTCATTTTTTTTTTTTGTAAATATATAATGTGGTGCATACCAATACAGACCGGAGGGAAATTATTCTGATCTTTTATTAAGAAAATATAGAGCTAGTATTTGTACTCACGTTCACAGTCAATCAACAAAGTTACTGTAGGCAACTTGAGAAACTTAACAGTAACTCATGCTATAAAACAAAGGAAAAATTCCAATGTAAACAGAAACAAACCACATCGTGATGGACATTAAGACTAACAGTCTGACAGCTTGCAATGTGTATATTTTTGAAGAGTTAATTAATTTTCTCCAATGTTGCATGTACTTTTACAATCATTACTGTGCTCTGGAAAAATATTAATATATTATATCTTGTTTGGAACTTAGATTAGTAACGTACAAGTTGGATCAAATATAGCTGATGTAAATGGTTTACTATGGTAATTAGTTAACTTCAGTGTAATTGGGACAACCAGAGGTAGATTTTGAAGTGCATTCTTGAAGTATCTGTTTCATATAGAGGATAGATTGTAATTTTCTTGAGGGCATTCTTGAGCATGATTAGATTCTTTATCTTTTCATCATATTTACATTATAATGCATTTCAGCTTGATCTTTGTTGGTAGAAGTAGTAATCCATGGATCTTCACGTAATCTGGATTGCTAATTGCTTTTGCTTTTGTCTTGTTATTTTCTTTACAAGTTTCTGTTGCGTTTGAGGATTGCTAGTTGATTAATCAGTTTCCATCTGGACTTCTAAATATTTATTTCTCTCAAATTTCGGATGTTCAATGAATAAATAACTTGTTTTTGGAGGTTCTTGGTCATTGTCACCTTGAACAACTACTAATCTAACCTAATTTACTGTTTGAAAATATGTTGGAGACTAGCTCTTCGTATACTGATGTGTTTGGGTTGCTCTCTTTCTAAGTCCTACTTTATTCTATCGCTTCAATTTTGTCCTTTATGGTCTGATGGTTCTGTTGTACTAGAATCATTGGTACCTGATATGAACATTGCTCTTTATCCTCTCCCCAAACACAAGGGAAAAGGAGTCTCTTTGTGAACAGAAAAATTTTCTTCTGCCATCAACGATTCCCCAATTCCCTGCTAAGAAGATTACTAGAGAAGCTTTCCAACTATCCTTATAAAACAATAAAACAGAATAATTGCAAGAAGACCCGAGCCAAAAAGCTTGATCCTGAAGTATGAAGTAAATTAGGTAAAAATTGTCATGAGTTTTCTACATTTTCCTTGAAACATCTGTAGGTTTCTTTTTTATAAAGTGCCCCCAACTGTCGGTTTTATTCTACTTGTATAGTAAAATAGCTGAGTGTTGAATAGTATTATGATGAATTACAAAACTATTTTTCCTTGATATCAAAGCGTTTTTTTCCATAAGCATCTCAAGACATGAAAAATTTATCATTCAAAAGAATAGCATCAGTCATAAAACCTTAACTGCTTTTAAATAATACAGAATGAGAATAGTTTTATGGAATAACTTGCTAGTAATCAGAGTTAGCCCTTAGTTTGTGGAAGTGATTAAGGATCGCTTTTTAGAAGAGGTCAAAATCACCAATGAATATGTCTTGAGAGCTGTTGGTTATTATGGATTTTAGAATGGTAAAATGCTGATACAATAAGCAGAATGTTTGATTAGTTTTAAATGTCTGCTTAAACAATTTTTTCTATGAAAAGAAAGTTTTGCTTGTGATCATACTGCAGTCGGCTTCTCTTTCTTATTCAAATACGGTAATACACCATTTTTGCAAGTCTTCAATTAGGAGCAGAGGTCTCCTCTCTCTTAAATTTATTATTCTGATTTGATAATGGTTGTGCTATTATTTGGATTAGAAATTTTTAGTGAACTTTATATTAGAAATTATTTTGGTATCTTCACTGATATTTGTCTGTTGCCCTTTATGCTAGTTCCTGCATTACTCTATTTCTTTAGTTTATAAAACTGTCTGATACATGCATATGCTTGGTAACATTCTTGCCTTGCTCACCAGATGTTATGAACAAAGGATGAACCTTGTCACTTTGGGTTGCTGTGCCCTTTCTCACACCATAAATTAATAGTGCCTTTGCTTTGCTTAGCAGTTATCTAAGGTTTGAGGTGACCTTTTTTTATTTTTATTTTCTAAAGATACTGAGATTATTTCAGTCTCTTGGATTTATTTATCTGTAAATTGATATTCTTTAATGAGTGCACAATGTTTCCCGTATGAATATTGCATCCTTTTGTTTTATGCTCTTAATAAGGTCTGAATACATCAAAGGAATTAATGTGGTTACTTATATTCTTGCATGCCTCTCTTTCTGCATAATTTATTTTCTTACCTGATAATTATGATGCCTTTATCTGTACGATGTTTAAGAAGTTATGGTTCTAGTGGTATTACACTCGGTTCTGCTACCTCTTGATGAAATTTCTTAAATTATTTTTTCCAGATTGGATTTCTCTACTTGAGATATGTTGCAGACCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGAAGAGGTATGTGATACTGATGCATATATGAGCTTGATTATTATTATTATTTTAATTTTGTGGATTGTTGCTTAAGCATTATGGTTAGGGTGCATGTGTTTCGCTTAAAATTTCCTTTAATGTGACTGTAAGTTGCTTTCTGGTTTCTGCTACCTTCAATGTATGTATATATGCTGATAATTTAGTAAGTGCAGACTGATTTTCTATATTATTGAGATGTCATATATGCTTGTGAAGGTATTTGAACTTGAGGCCGTTGATAGTTTCTAACCTAGGAATTATTCAATGTCCTTTTATTCGACTTTCTTCTGCAACCCCTTCTTTTGGGGGGCATTCACATGACCCATCCTTTGGAGAAGGGACACCTTTTCCCTTTGTCTGTTAGGCTGTTTTGGCTGGATTGGTGCCGTTTGAGTGAAGTTTAATGTAAATTACAAAAGAGGCACTAGCGTCCATATGATTTATAAAACATATTGCTAATAAGCTGAGAGAGAAGTAAGGCTATGGTCTCAAAAAGAGGGGAGAATTTACATCAAGTGAGAGCGAGAACAATATAAGTTAGGTGTTAAAGAAAGAGTCAAAATTTGTAGCTTTTTCCTTGAAGATGTGATGGTTTCATTGGGTGGGGGGTGTATGGAGAGGTCAGTAAAGGTACTGATAAGTAAGGGGCACAAGGCTTTTGGAGACTCCTTTGGCATGTATTGTGGGTTCCAAAAAGGTAAGAGGTAACTCCGGCGGCTTTGGCTTTGGGCAGTTGACATCAGCAATGTGACCAACGGAGTAGCCTAGTCTTCATTGAAGTTTAACTTTTTCGTACCTGGAAAAAATTTGACTTCCTACTACAAAAGTTGGAATTCACTGTGCATGATGAATGTATTTCCAACGTTTCTTCTCTGGCATGAGTTTATTTGTGGTATTTTGTTGATTATCAATTGCTTTGAGTGATAAGTGCATTAAATAGTCCACCGCTGAACTCTAAGATACTTGCCTCTTGGTGAATGAGAAGTCTTTTATGGGGTTCTTATCTTTGTTTCATCATCCTGAATTCACCACCGGTTGGTCTTTTGTTTGGAAACCCAAAGTCCTCATTATTCGTGGCTTTTACTATTGCTGGTAATGTTTGACCTGTTGATATCAAGATCATCAATGAGTAATCCTGCTGTTCTCTTTAATTGTCACACAGTTGGCTTCAAAGTTCGAAATTCTCTTCGACGCTTCTTTTGGTCTGGAATTCGAAGGGGTCTTTCCTCTTTGATGAGTTGGATTGTTAAGATATCCATGACATTTTAAGTTCTTTGCTTGGCAAGTTTTGCATGGAAAAGTGAACGTCCAAAACCATCTCAAGAGATTTTTCCCTTGTGATGCACGTGCAATGCACGTTCTCTATGGCCAGTTAGAAGAGGATCTTGAACATTTTTTGTGAGGTTGCTAGTTTGCTTATTCCCTTGGAGTCGATGCTTGAAGTTGTTTGGGATTTGTTTGGCTCTTAGCAAAAATTGCAGCTTTATGATTGAGGAGGCTCTCTTGAACTTTCCCTTTTAGAATAAGTGTAGCATTCTGTGGCATGGATTTTTTGTTTTTGCTAGTTTTTGCGGAATTTGGCTAGTGATGAAAAGTAGGATTTATTGAGGGGTGAATAGATCCTGGGAGGAGGTTGCTAGGTTTAATGCTTTTTTATGGGCGTTCACTACTTAAGCTTTTGTAATTACTAACCTCTTATTCTTTTGGATTGGAGGCTCTTCTTGTAGTTATTGTTAGGATGTTTTTATGGCTTTTTTCCTTGTACTTCTTTCATTTTTATAGAATGAAAGTTTGGTTTCTTATAAACAAAAATCTTAGCCAGTTTTTCCTAGGGATGGTTTGTGGTAAGTGGGATTTGGAAGTGTATATTCTCTTGCCTCCTTTTGGGCCTTTCCAGTAAACACCCTTTACATTGTTCTACAGAGCTCGTATAGTCTATCAGAGAAATCTTTTGTTACTCCTTTGGTTTGGGATCAGGGATCCTACCTTTTTTTAGTAAATTTCACATCAGAGGAATTTGTTTCTTTTATAAAAAAGGAAAGTAAACAGCATTTTTCATGTCTTTTTTCATTTGTTGGTTGTAGTCCTTTTCCCCTTCCGACAAATATCAGAAAATAAAATTCTTCCTTACAAATCTATGGTGTTTTGCATGTTTCATTTTTAATGGATTTAATAAGAATCTAAAACTATTTTTAATTGAATTAATAAGAATCTAAAGCTATAAAAGGCAGAAAAAGAACTAACAGACTTATCACTTATGTGTTTCAGGAATTTTCACCAGGATCCCATGGACGTATGGCTACAATGGGTGTTTATGTTCGTGATTTGCTCCTTGGACAGGTCAGGTTATATACCAAACATTTTCCCCTTAATTATCTTGTTTATTGCTCATATCTTTCTTTTTTTCTTTCCTTTTTAACATCCTTGCGTCACAGACATGATAAGTTGTGTGTATATACAGTTGCTGTTGGCATTTCTCTAGTGTTTAACCATGGGAACGCTGCATTATTGATTCATGGTTGGAAGATATTGTTAAGAGTTGTATATAGAGTATAATATAGTTAAAAGATTTTCATCAAGAGACAAGAAGATGCAAAAAGGTTCAAGAAAAGAACTACAGCATAACAGTAACCTTTCCCTCCCGATTTAAGTAATTAGGTCCTTGTTTCCATTAAACCATCTCATATTTTGTTGGTTTATCATGGTGATTCGAAGCCATGTTCTCTGGCATGAGCTGGTGAAGTTGACTTCACAATGTGCCGTTTGGTGTCTTGTCCACTTTATTGTTGTCTTCATTTTTGTTATTTGTCTTTTCCAATGTATCCAGTATTTTTCTTAACTTTCCTTATATAACCTTTTCTTGTAGTTCTATTTCCCACTTATGCTCCTTGTAGACTAGAAGGAGCCTTTTACATGAAGTATGGTTGTGTTGGCTTTTACCTGAGATACCCTCCAGAGCTCTGCCCCTTCATGAACTTTCCTTACACTATTTCAAAATCCAGATCATGAATAAAATGCTTTATGGAATGTTCTTGAAATATTTAAATCAATCATTGTTTGGGTTCGATTGTTGCTCTGTTGTAGTATATGGTGAAAAGAGATGAATCAAGTGTATAAGATGAACAAAATAAAATATGAGACCAAGGTTTTGATTTTATCACATTGTTGTTATCTAGAAGTGGTTTAACTCATGTGAACAGCCCTCAATACCTTTTCTTTGTTCAGCCATAGCCGCACAACTATTCGAGCATAGGAGCAAACTGAAATGTTGTGTGTTTTAATGCTTAATCAGTAGAAAGCTGATGTAAATCTTGATATCCATGTATGGGTTTCATTTGGCCAACCGAGCGGAATGATAGTTAAGCTTTTATTTTATTTGTTTTTTTAGCTTTTAAACGGCAAAAATTGTGTTTGGTGTTATCTGGTAGTATTAATGTTTCTATTATGTCTGCCAACAAACGGAATGATCATTATTCCACATGTTTAAACTGGAACATATGAAACACATATCTGCCTTTAGACATATTATTATTGTTATTTTTGAATCCTCGTCCTTGTAGCTAAGCAGGTACCCACATTTTGTTTGCCAATTGCAGTATTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTCGAAAAGTTGAAGCTTCCAAGCAAGCATTCAGGTGTGACTGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGCCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGACTCATCTCCTGTTCGTCGTACACTGCCACCATCCGTTAATGATAGAGATATCAGTGATGATCTACGAAGATCCCCAAGCAGTCGCCGTAGTCAAAGCCGTGAACATCCAGATAGTAGAGAGAGGAGCAGGGATAGAGATTATGATAGGGAGAGGAGCAGGGATAGAGATCACGACAGGGAGAGGGACAGAGGAAGGGATAGGGACCGAGATCGAGAACATGATCGGGACAGGGAGAAGTACAGAGATCGGGAGAGGGACCGAGATAGAGAAAGAGAGAGAGCTAGGGATAGGGAAAGGGACAGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATACCGATAGAGAGAGTAGAAGGGACTTTGAAAGGAGTAGCCGTGATGGTGGCTCCAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGGAGCAGAAGTCGAAGTCTACAAACAGGGAATGCCCATCACGAGCGAGAGCCAAGTCCTGCAAGGGGCGGAACTACAGAGAAGACGTCCATCATATCGAGCAATCTGGCGAAACTAAAAGATATCTATGGCGATGTGAGCGAGCAGAAAGGGGATTCGAGCAGAGAAAGAGTTAATAGAAGAGATAGTAGTGGCGAAGAAGTGATTAGACTGGGTGGATCCTGGAAATAG

mRNA sequence

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTTGACGAGATTTATAACCAAGTTGATCACGTGGAGCCGTGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAACTTACTGTTAAGCAAATGCATGGGCTATTAAAGCATGAGGATTCTCCTTACATCAGAGCGATTGGATTTCTCTACTTGAGATATGTTGCAGACCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGAAGAGGAATTTTCACCAGGATCCCATGGACGTATGGCTACAATGGGTGTTTATGTTCGTGATTTGCTCCTTGGACAGTATTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTCGAAAAGTTGAAGCTTCCAAGCAAGCATTCAGGTGTGACTGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGCCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGACTCATCTCCTGTTCGTCGTACACTGCCACCATCCGTTAATGATAGAGATATCAGTGATGATCTACGAAGATCCCCAAGCAGTCGCCGTAGTCAAAGCCGTGAACATCCAGATAGTAGAGAGAGGAGCAGGGATAGAGATTATGATAGGGAGAGGAGCAGGGATAGAGATCACGACAGGGAGAGGGACAGAGGAAGGGATAGGGACCGAGATCGAGAACATGATCGGGACAGGGAGAAGTACAGAGATCGGGAGAGGGACCGAGATAGAGAAAGAGAGAGAGCTAGGGATAGGGAAAGGGACAGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATACCGATAGAGAGAGTAGAAGGGACTTTGAAAGGAGTAGCCGTGATGGTGGCTCCAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGGAGCAGAAGTCGAAGTCTACAAACAGGGAATGCCCATCACGAGCGAGAGCCAAGTCCTGCAAGGGGCGGAACTACAGAGAAGACGTCCATCATATCGAGCAATCTGGCGAAACTAAAAGATATCTATGGCGATGTGAGCGAGCAGAAAGGGGATTCGAGCAGAGAAAGAGTTAATAGAAGAGATAGTAGTGGCGAAGAAGTGATTAGACTGGGTGGATCCTGGAAATAG

Coding sequence (CDS)

ATGGAGATAAAGACTTGCGGGAAGCCAATTGATTCTTTGCTGGAGAAGGTTCTATGTATGAATATTCTGTCTTCTGATTACTTTAAGGAGCTTTATCGTTTGAAGACATACCATGAAGTGGTTGACGAGATTTATAACCAAGTTGATCACGTGGAGCCGTGGATGACTGGTAACTGCCGTGGTCCTTCAACAGCATTCTGCCTTCTGTACAAGTTTTTCACCATGAAACTTACTGTTAAGCAAATGCATGGGCTATTAAAGCATGAGGATTCTCCTTACATCAGAGCGATTGGATTTCTCTACTTGAGATATGTTGCAGACCCAAAGACTCTCTGGAATTGGTTTGAACCGTATGTTAAAGATGAAGAGGAATTTTCACCAGGATCCCATGGACGTATGGCTACAATGGGTGTTTATGTTCGTGATTTGCTCCTTGGACAGTATTACTTCGATACCCTTTTCCCTCGTATTCCAGTTCCTGTCTTGCGGCAAGTTGTATCTAATCTCGAAAAGTTGAAGCTTCCAAGCAAGCATTCAGGTGTGACTGGGGAAACACATCGAATAGGGTCTGAAGACACTGCACGGCGCCCCCCTTCTGTTAAAGCTTCACTTTCAGTTTCCTTTGGACAACGAGCCCCACATCGTGCCTCAACTAGGGACTCATCTCCTGTTCGTCGTACACTGCCACCATCCGTTAATGATAGAGATATCAGTGATGATCTACGAAGATCCCCAAGCAGTCGCCGTAGTCAAAGCCGTGAACATCCAGATAGTAGAGAGAGGAGCAGGGATAGAGATTATGATAGGGAGAGGAGCAGGGATAGAGATCACGACAGGGAGAGGGACAGAGGAAGGGATAGGGACCGAGATCGAGAACATGATCGGGACAGGGAGAAGTACAGAGATCGGGAGAGGGACCGAGATAGAGAAAGAGAGAGAGCTAGGGATAGGGAAAGGGACAGGGACAGAGAACGAAGTTATGATTATGATCGAAGGACTCATTATACCGATAGAGAGAGTAGAAGGGACTTTGAAAGGAGTAGCCGTGATGGTGGCTCCAGGCATTATCGAAGGAGTCGTAGCCGAAGTAGGAGCCGGAGCAGAAGTCGAAGTCTACAAACAGGGAATGCCCATCACGAGCGAGAGCCAAGTCCTGCAAGGGGCGGAACTACAGAGAAGACGTCCATCATATCGAGCAATCTGGCGAAACTAAAAGATATCTATGGCGATGTGAGCGAGCAGAAAGGGGATTCGAGCAGAGAAAGAGTTAATAGAAGAGATAGTAGTGGCGAAGAAGTGATTAGACTGGGTGGATCCTGGAAATAG

Protein sequence

MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVKDEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSGVTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDDLRRSPSSRRSQSREHPDSRERSRDRDYDRERSRDRDHDRERDRGRDRDRDREHDRDREKYRDRERDRDRERERARDRERDRDRERSYDYDRRTHYTDRESRRDFERSSRDGGSRHYRRSRSRSRSRSRSRSLQTGNAHHEREPSPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRLGGSWK

Homology

[Close]

BLAST of Cla97C01G008890 vs. NCBI nr
Match: XP_008463144.1 (PREDICTED: pre-mRNA-splicing factor 38B [Cucumis melo] >XP_008463145.1 PREDICTED: pre-mRNA-splicing factor 38B [Cucumis melo] >XP_016902978.1 PREDICTED: pre-mRNA-splicing factor 38B [Cucumis melo])

HSP 1 Score: 540.4 bits (1391), Expect = 5.6e-150
Identity = 419/493 (84.99%), Postives = 425/493 (86.21%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG
Sbjct: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLP SVNDRDI+DD
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240

Query: 241 LRR----------------------------------------------------XXXXX 300
           LRR                                                    XXXXX
Sbjct: 241 LRRSPSNRRSQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRDGGSRHYRRXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RSSRDGG+RHYRR   XXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFERSSRDGGTRHYRR---XXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDS 442
           XXXXXXXXXXX     PARGGTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  ++NRRDS
Sbjct: 421 XXXXXXXXXXXEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSS--KINRRDS 480

[Close]

BLAST of Cla97C01G008890 vs. NCBI nr
Match: XP_011655154.1 (PREDICTED: pre-mRNA-splicing factor 38B [Cucumis sativus] >XP_011655155.1 PREDICTED: pre-mRNA-splicing factor 38B [Cucumis sativus])

HSP 1 Score: 539.3 bits (1388), Expect = 1.2e-149
Identity = 418/443 (94.36%), Postives = 422/443 (95.26%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG
Sbjct: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRD--IS 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLP S NDRD    
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSANDRDNNXX 240

Query: 241 DDLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRDGGSRHYRR 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RSSRDGG+RHYRR
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERSSRDGGTRHYRR 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDS 420
              XXXXXXXXXXXXXXXXXXXXXXX ARGGTTEK S+ISSNLAKLKDIYGDVSEQKGDS
Sbjct: 361 ---XXXXXXXXXXXXXXXXXXXXXXXXARGGTTEKASVISSNLAKLKDIYGDVSEQKGDS 420

Query: 421 SRERVNRRDSSGEEVIRLGGSWK 442
           S  +VNRRD SGEEVIRLGGSWK
Sbjct: 421 S--KVNRRDGSGEEVIRLGGSWK 438

[Close]

BLAST of Cla97C01G008890 vs. NCBI nr
Match: XP_022141497.1 (pre-mRNA splicing factor SR-like 1 isoform X1 [Momordica charantia] >XP_022141498.1 pre-mRNA splicing factor SR-like 1 isoform X1 [Momordica charantia])

HSP 1 Score: 534.3 bits (1375), Expect = 4.0e-148
Identity = 408/462 (88.31%), Postives = 416/462 (90.04%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DEEEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVV+NLEKLKLPSKHSG
Sbjct: 121 DEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVANLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPS ND+D  DD
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSANDKDNGDD 240

Query: 241 LRR--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +RR                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 VRRSPSSRRSQSREHPDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXRSSRDGGSRHYRRXXXXXXXXXXXXXXXXXXXXXXXXXXPARGGTTEKTSIISSN 420
           XXXXX+SSRD GSRHYR XXXXXXXXXXXXXXX           P R G T+KTS ISSN
Sbjct: 361 XXXXXKSSRDDGSRHYRXXXXXXXXXXXXXXXXTVNAHHERVPSPVRDGNTDKTSNISSN 420

Query: 421 LAKLKDIYGDVSEQKGDSSRERVNRRDSSGEEVIRL-GGSWK 442
           LAKLKDIYGDVS+QKGD S+ERV +RD SGEEV RL GGSWK
Sbjct: 421 LAKLKDIYGDVSDQKGDCSKERVPKRDGSGEEVFRLGGGSWK 462

[Close]

BLAST of Cla97C01G008890 vs. NCBI nr
Match: XP_022993767.1 (pre-mRNA splicing factor SR-like 1 [Cucurbita maxima])

HSP 1 Score: 533.1 bits (1372), Expect = 8.9e-148
Identity = 410/458 (89.52%), Postives = 417/458 (91.05%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW EPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWVEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DEEEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVV+NLEKLKLPSKHSG
Sbjct: 121 DEEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVANLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
           VTGETHR+GSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLP S  DRD SDD
Sbjct: 181 VTGETHRLGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPTSAIDRDNSDD 240

Query: 241 LRR------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           LRR            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 LRRSPSSRRSQSREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSS 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            RSS
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYTDREGRRDFERSS 360

Query: 361 RDGGSRHYRR---XXXXXXXXXXXXXXXXXXXXXXXXXXPARGGTTEKTSIISSNLAKLK 420
           RDGG+RHYRR   XXXXXXXXXXXXXXXXXXXXXXXXXX     T+EKTSIISSNLAKLK
Sbjct: 361 RDGGTRHYRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSEKTSIISSNLAKLK 420

Query: 421 DIYGDVSEQK--GDSSRERVNRRDSSGEEVIRLGGSWK 442
           D+YGDVSEQK  GD S+ER+NRRDSSGEEVIRLGGSWK
Sbjct: 421 DMYGDVSEQKGGGDPSKERINRRDSSGEEVIRLGGSWK 458

[Close]

BLAST of Cla97C01G008890 vs. NCBI nr
Match: XP_023548529.1 (pre-mRNA splicing factor SR-like 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 515.4 bits (1326), Expect = 1.9e-142
Identity = 375/444 (84.46%), Postives = 382/444 (86.04%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGK IDSLLEKVLCMNILSSDYFKELYRLKT+HEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKAIDSLLEKVLCMNILSSDYFKELYRLKTFHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVAD KTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADTKTLWNWFEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DEEEFSP SHGRM TMGVYVRDLLLGQYYFDTLFPRIPV VLRQV +NLEKLKLPSKHSG
Sbjct: 121 DEEEFSPESHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVSVLRQVAANLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVR TLPPSV+DRD  DD
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRCTLPPSVSDRDNKDD 240

Query: 241 LRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           L+R             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 LQR---SPSSRHPDNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRDGGSRHY--RR 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            RSSRD  +RHY    
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTHYADSRRDYKRSSRDSVTRHYXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDS 420
           XXXXXXXXXXXX              P RGGTTEKTSI   NLAKLKDIYGDV E+KGD 
Sbjct: 361 XXXXXXXXXXXXLQTGNDGYHKREASPVRGGTTEKTSI---NLAKLKDIYGDVREEKGDL 420

Query: 421 SRERV-NRRDSSGEEVIRLGGSWK 442
           S+ER  NRRDSSGEEVIRLGGSWK
Sbjct: 421 SKERFNNRRDSSGEEVIRLGGSWK 438

[Close]

BLAST of Cla97C01G008890 vs. TrEMBL
Match: tr|A0A1S3CIJ0|A0A1S3CIJ0_CUCME (pre-mRNA-splicing factor 38B OS=Cucumis melo OX=3656 GN=LOC103501359 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 3.7e-150
Identity = 419/493 (84.99%), Postives = 425/493 (86.21%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           D+EEFSPGSHGRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG
Sbjct: 121 DDEEFSPGSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
           VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLP SVNDRDI+DD
Sbjct: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSVNDRDINDD 240

Query: 241 LRR----------------------------------------------------XXXXX 300
           LRR                                                    XXXXX
Sbjct: 241 LRRSPSNRRSQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRDGGSRHYRRXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RSSRDGG+RHYRR   XXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFERSSRDGGTRHYRR---XXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSRERVNRRDS 442
           XXXXXXXXXXX     PARGGTTEK S+ISSNLAKLKDIYGDVSEQKGDSS  ++NRRDS
Sbjct: 421 XXXXXXXXXXXEREQSPARGGTTEKASVISSNLAKLKDIYGDVSEQKGDSS--KINRRDS 480

[Close]

BLAST of Cla97C01G008890 vs. TrEMBL
Match: tr|A0A2I4EBU1|A0A2I4EBU1_9ROSI (pre-mRNA-splicing factor 38B OS=Juglans regia OX=51240 GN=LOC108988163 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 2.8e-129
Identity = 378/444 (85.14%), Postives = 396/444 (89.19%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEI+T GKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTA CLLYKFFTMKLTVKQMHGLLKH DSPYIRAIGFLYLRY ADPKTLWNWFEPYVK
Sbjct: 61  GPSTAICLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYAADPKTLWNWFEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DEEEFSPGS+GRM TMGVYVRDLLLGQYYFDTLFPRIPVPV+RQVV+NLEKLKLP+KH G
Sbjct: 121 DEEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVMRQVVANLEKLKLPTKHIG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
           VTG++ R GS+DTARRPPSVKA+LSVSFGQRAPHRASTRDSSPVRRTLPP+ +DR  SDD
Sbjct: 181 VTGDSTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPAPHDRASSDD 240

Query: 241 LRR--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           LRR      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 LRRSPRARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRDGGSRHYRR 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDS 420
           XXXXXXXXXXXXXXXXXXX       P R G+ EKTS  SSNLAKLKD+YGD+ +QKGD+
Sbjct: 361 XXXXXXXXXXXXXXXXXXXHGDRHSSPQRDGSKEKTS-ASSNLAKLKDLYGDLGDQKGDA 420

Query: 421 SRERVNRRDSSGEEVIRLGGS-WK 442
           + ER  RRD+ GEEVIRLGGS WK
Sbjct: 421 NMERAPRRDNGGEEVIRLGGSTWK 443

[Close]

BLAST of Cla97C01G008890 vs. TrEMBL
Match: tr|A0A2P4NB23|A0A2P4NB23_QUESU (Pre-mrna splicing factor sr-like 1 OS=Quercus suber OX=58331 GN=CFP56_37699 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 3.6e-129
Identity = 362/442 (81.90%), Postives = 378/442 (85.52%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEI+TCGK IDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIQTCGKSIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKH DSPYIR IGFLYLRY ADPKTLWNWFEPYVK
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHTDSPYIRCIGFLYLRYAADPKTLWNWFEPYVK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DEEEFSPGS+GRM TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ+V+NLEKLKLPSKHSG
Sbjct: 121 DEEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQIVANLEKLKLPSKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
           VTGET R GS+DTARRPPSVKA+LSVSFGQRAPHRASTRDSSPVRRT+ P   DR  SDD
Sbjct: 181 VTGETTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTIQPPSYDRASSDD 240

Query: 241 LRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
            R+              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 PRK------SPRSRRSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRDGGSRHYRRXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             XX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSR 420
           XXXXXXXXXXXX            P R G  EKTS +S+NLAKLKD+YGD+   KGD+S 
Sbjct: 361 XXXXXXXXXXXXQAGIVNDDRHSSPQRDGIKEKTS-VSNNLAKLKDLYGDLGNDKGDASM 420

Query: 421 ERVNRRDSSGEEVIRLGG-SWK 442
           ER+ RRD+SGEEVIRLGG SWK
Sbjct: 421 ERIPRRDNSGEEVIRLGGSSWK 435

[Close]

BLAST of Cla97C01G008890 vs. TrEMBL
Match: tr|A0A1Q3ARV2|A0A1Q3ARV2_CEPFO (PRP38 domain-containing protein/PRP38_assoc domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_01985 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.4e-128
Identity = 339/442 (76.70%), Postives = 363/442 (82.13%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           MEI+ CGKPID+LLEKVLCMNILSSDYFKELYRLKTYHEV+DEIY QVDHVEPWMTGNCR
Sbjct: 1   MEIQNCGKPIDALLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYLQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKH+DSPYIRAIGFLYLRY ADPKTLWNWFEPY+K
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHQDSPYIRAIGFLYLRYAADPKTLWNWFEPYIK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DEEEFSPGS GRMATMG Y+RDLLLGQYYFDTLFPRIPVPV+RQ+V+NLEK+KLP+KHSG
Sbjct: 121 DEEEFSPGSCGRMATMGAYLRDLLLGQYYFDTLFPRIPVPVMRQIVANLEKMKLPAKHSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDD 240
           VTG+T R GS+DTARRPPSVKA+LSVSFGQRAPHRASTRDSSPVRRTLPP   +R  SDD
Sbjct: 181 VTGDTTRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPSYERTTSDD 240

Query: 241 LRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           +RR                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 VRRSPRSRRSQSREYCDREYLDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRDGGSRHYRRXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   + G S   R   
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGISSFDRH-- 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSSR 420
                                   P R  + +KTS  SSNLAKL+D+YGD+S QK D+S 
Sbjct: 361 ----------------------SSPQRDESKDKTS-ASSNLAKLRDLYGDLSNQKEDASS 417

Query: 421 ERVNRRDSSGEEVIRLGGS-WK 442
           ERV RRD+ GEEVIRLGGS WK
Sbjct: 421 ERVPRRDNGGEEVIRLGGSTWK 417

[Close]

BLAST of Cla97C01G008890 vs. TrEMBL
Match: tr|M5XBU6|M5XBU6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G069400 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.3e-128
Identity = 352/443 (79.46%), Postives = 377/443 (85.10%), Query Frame = 0


Query: 1   MEIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCR 60
           ME++TCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEV+DEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEVQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVK 120
           GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRA+GFLYLRY ADPKTLWNW EPY+K
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAVGFLYLRYAADPKTLWNWVEPYIK 120

Query: 121 DEEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSG 180
           DEEEFSPGS+GR  TMGVYVRDLLLGQYYFDTLFPRIPVPVLRQ+V++LEK+KLP+K SG
Sbjct: 121 DEEEFSPGSNGRTTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQIVAHLEKMKLPTKLSG 180

Query: 181 VTGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVN-DRDISD 240
           +TGE  R GS+DTARRPPSVKA+LSVSFGQRAPHRASTRDSSPVRRTLP     D+  SD
Sbjct: 181 ITGEATRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPXXXXYDKASSD 240

Query: 241 DLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           DLR                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 DLR--------THRSQSREYSDREYLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRDGGSRHYRRX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XX   SSRDGG RHY  X
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSRXXQYESSRDGG-RHY-XX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXPARGGTTEKTSIISSNLAKLKDIYGDVSEQKGDSS 420
           XXXXXXXXXXXXXXXXXX       P R    ++TS  SSNLAKL+D+YGD+SEQKGD+S
Sbjct: 361 XXXXXXXXXXXXXXXXXXGAALRSSPQRDVNKDRTS-ASSNLAKLRDLYGDISEQKGDAS 420

Query: 421 RERVNRRDSSGEEVIRLGGS-WK 442
            +R++R D+ GEEVIRLGGS WK
Sbjct: 421 MDRISRIDNGGEEVIRLGGSRWK 432

[Close]

BLAST of Cla97C01G008890 vs. Swiss-Prot
Match: sp|Q8RWB1|SRL1_ARATH (Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana OX=3702 GN=SRL1 PE=1 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 2.3e-110
Identity = 195/242 (80.58%), Postives = 218/242 (90.08%), Query Frame = 0


Query: 2   EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVKD 121
           PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRYVAD KTLW W+EPY+KD
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKD 122

Query: 122 EEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSGV 181
           +EEFSPGS+GRM TMGVYVRDLLLG YYFDTLFPRIPVPV+RQ+VSNLEK+ LP+K SG 
Sbjct: 123 DEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKMNLPTKPSGS 182

Query: 182 TGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDDL 241
           TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVRR  PP+  DR+  D++
Sbjct: 183 TGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRP-PPTGYDRNGGDEV 242

Query: 242 RR 244
           ++
Sbjct: 243 QQ 242

[Close]

BLAST of Cla97C01G008890 vs. Swiss-Prot
Match: sp|Q80SY5|PR38B_MOUSE (Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.7e-42
Identity = 92/190 (48.42%), Postives = 114/190 (60.00%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 59  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 118

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA+GF+Y+RY   P  LW+W
Sbjct: 119 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW 178

Query: 134 FEPYVKDEEEFS-PGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLK 184
           FE ++ DEE+       G + T+G  +R  L    +F TLFPRIPVPV + +   ++   
Sbjct: 179 FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRP 238

[Close]

BLAST of Cla97C01G008890 vs. Swiss-Prot
Match: sp|Q6AXY7|PR38B_RAT (Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.7e-42
Identity = 92/190 (48.42%), Postives = 114/190 (60.00%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA+GF+Y+RY   P  LW+W
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW 177

Query: 134 FEPYVKDEEEFS-PGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLK 184
           FE ++ DEE+       G + T+G  +R  L    +F TLFPRIPVPV + +   ++   
Sbjct: 178 FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRP 237

[Close]

BLAST of Cla97C01G008890 vs. Swiss-Prot
Match: sp|Q5VTL8|PR38B_HUMAN (Pre-mRNA-splicing factor 38B OS=Homo sapiens OX=9606 GN=PRPF38B PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-41
Identity = 91/187 (48.66%), Postives = 113/187 (60.43%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  NILSS YFK +LY LKTYHEVVDEIY +V HVEPW          TG C G  
Sbjct: 58  LNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVR 117

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA+GF+Y+RY   P  LW+W
Sbjct: 118 GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDW 177

Query: 134 FEPYVKDEEEFS-PGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLK 181
           FE ++ DEE+       G + T+G  +R  L    +F TLFPRIPVPV + +   ++   
Sbjct: 178 FESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRP 237

[Close]

BLAST of Cla97C01G008890 vs. Swiss-Prot
Match: sp|Q6P7Y3|PR38B_DANRE (Pre-mRNA-splicing factor 38B OS=Danio rerio OX=7955 GN=prpf38b PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.8e-38
Identity = 85/177 (48.02%), Postives = 111/177 (62.71%), Query Frame = 0


Query: 14  LEKVLCMNILSSDYFK-ELYRLKTYHEVVDEIYNQVDHVEPW---------MTGNCRG-- 73
           L  ++  N+LSS YFK +LY LKTYHEVVDEIY +V+HVEPW          TG C G  
Sbjct: 36  LNPMILTNVLSSPYFKVQLYELKTYHEVVDEIYFKVNHVEPWEKGSRKTAGQTGMCGGVR 95

Query: 74  -------PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNW 133
                   STAFCLLYK FT+KLT KQ+ GL+ H DSP IRA+GF+Y+RY   P  L +W
Sbjct: 96  GVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHSDSPDIRALGFMYIRYTQPPPDLVDW 155

Query: 134 FEPYVKDEEEFS-PGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLE 171
           ++ ++ DEEE       G + T+G  +R  L    +F TLFPRIPVPV + +  +++
Sbjct: 156 YDEFLDDEEELDVKAGGGCVMTVGEMLRSFLTKLEWFSTLFPRIPVPVQKAIDQHMK 212

[Close]

BLAST of Cla97C01G008890 vs. TAIR10
Match: AT5G37370.1 (PRP38 family protein)

HSP 1 Score: 400.6 bits (1028), Expect = 1.3e-111
Identity = 195/242 (80.58%), Postives = 218/242 (90.08%), Query Frame = 0


Query: 2   EIKTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRG 61
           EI++ G+  +SLLEKVL MNILSSDYFKELY LKTYHEV+DEIYNQV+HVEPWM GNCRG
Sbjct: 3   EIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRG 62

Query: 62  PSTAFCLLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVKD 121
           PSTA+CLLYKFFTMKLTVKQMHGLLKH DSPYIRA+GFLYLRYVAD KTLW W+EPY+KD
Sbjct: 63  PSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKD 122

Query: 122 EEEFSPGSHGRMATMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSGV 181
           +EEFSPGS+GRM TMGVYVRDLLLG YYFDTLFPRIPVPV+RQ+VSNLEK+ LP+K SG 
Sbjct: 123 DEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKMNLPTKPSGS 182

Query: 182 TGETHRIGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPPSVNDRDISDDL 241
           TG+  R GSEDTARRPPSVKASLSVSFGQRAPHRASTR SSPVRR  PP+  DR+  D++
Sbjct: 183 TGDMTR-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRP-PPTGYDRNGGDEV 242

Query: 242 RR 244
           ++
Sbjct: 243 QQ 242

The following BLAST results are available for this feature:

BLAST of Cla97C01G008890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463144.1	5.6e-150	84.99	PREDICTED: pre-mRNA-splicing factor 38B [Cucumis melo] >XP_008463145.1 PREDICTED...	[more]
XP_011655154.1	1.2e-149	94.36	PREDICTED: pre-mRNA-splicing factor 38B [Cucumis sativus] >XP_011655155.1 PREDIC...	[more]
XP_022141497.1	4.0e-148	88.31	pre-mRNA splicing factor SR-like 1 isoform X1 [Momordica charantia] >XP_02214149...	[more]
XP_022993767.1	8.9e-148	89.52	pre-mRNA splicing factor SR-like 1 [Cucurbita maxima]	[more]
XP_023548529.1	1.9e-142	84.46	pre-mRNA splicing factor SR-like 1 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C01G008890 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CIJ0\|A0A1S3CIJ0_CUCME	3.7e-150	84.99	pre-mRNA-splicing factor 38B OS=Cucumis melo OX=3656 GN=LOC103501359 PE=4 SV=1	[more]
tr\|A0A2I4EBU1\|A0A2I4EBU1_9ROSI	2.8e-129	85.14	pre-mRNA-splicing factor 38B OS=Juglans regia OX=51240 GN=LOC108988163 PE=4 SV=1	[more]
tr\|A0A2P4NB23\|A0A2P4NB23_QUESU	3.6e-129	81.90	Pre-mrna splicing factor sr-like 1 OS=Quercus suber OX=58331 GN=CFP56_37699 PE=4...	[more]
tr\|A0A1Q3ARV2\|A0A1Q3ARV2_CEPFO	1.4e-128	76.70	PRP38 domain-containing protein/PRP38_assoc domain-containing protein OS=Cephalo...	[more]
tr\|M5XBU6\|M5XBU6_PRUPE	2.3e-128	79.46	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G069400 PE=4 SV=1	[more]

BLAST of Cla97C01G008890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RWB1\|SRL1_ARATH	2.3e-110	80.58	Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana OX=3702 GN=SRL1 PE=1 ...	[more]
sp\|Q80SY5\|PR38B_MOUSE	7.7e-42	48.42	Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1	[more]
sp\|Q6AXY7\|PR38B_RAT	7.7e-42	48.42	Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1	[more]
sp\|Q5VTL8\|PR38B_HUMAN	1.7e-41	48.66	Pre-mRNA-splicing factor 38B OS=Homo sapiens OX=9606 GN=PRPF38B PE=1 SV=1	[more]
sp\|Q6P7Y3\|PR38B_DANRE	1.8e-38	48.02	Pre-mRNA-splicing factor 38B OS=Danio rerio OX=7955 GN=prpf38b PE=2 SV=1	[more]

BLAST of Cla97C01G008890 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G37370.1	1.3e-111	80.58	PRP38 family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005037	PRP38

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0008150	biological_process
biological_process	GO:0010226	response to lithium ion
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0071011	precatalytic spliceosome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G008890.1	Cla97C01G008890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005037	Pre-mRNA-splicing factor 38	PFAM	PF03371	PRP38	coord: 12..161 e-value: 4.9E-53 score: 179.4
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 1..306
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 295..439
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 408..432
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 373..387
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..441
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..354
None	No IPR available	PANTHER	PTHR23142:SF3	SUBFAMILY NOT NAMED	coord: 295..439
None	No IPR available	PANTHER	PTHR23142:SF3	SUBFAMILY NOT NAMED	coord: 1..306

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G008890	Cla009142	Watermelon (97103) v1	wmwmbB237
Cla97C01G008890	Csa5G348070	Cucumber (Chinese Long) v2	cuwmbB339
Cla97C01G008890	MELO3C025080	Melon (DHL92) v3.5.1	mewmbB009
Cla97C01G008890	ClCG01G008650	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G008890	CSPI05G13720	Wild cucumber (PI 183967)	cpiwmbB353
Cla97C01G008890	CmaCh04G022770	Cucurbita maxima (Rimu)	cmawmbB705
Cla97C01G008890	CmoCh15G007870	Cucurbita moschata (Rifu)	cmowmbB271
Cla97C01G008890	CmoCh04G023810	Cucurbita moschata (Rifu)	cmowmbB676
Cla97C01G008890	CsGy5G013630	Cucumber (Gy14) v2	cgybwmbB322
Cla97C01G008890	MELO3C025080.2	Melon (DHL92) v3.6.1	medwmbB008
Cla97C01G008890	Carg18286	Silver-seed gourd	carwmbB0551
Cla97C01G008890	Carg01445	Silver-seed gourd	carwmbB0858
Cla97C01G008890	CsaV3_5G020660	Cucumber (Chinese Long) v3	cucwmbB354
Cla97C01G008890	Bhi12G001044	Wax gourd	wgowmbB057

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G008890	Cucumber (Gy14) v1	cgywmbB469
Cla97C01G008890	Cucurbita maxima (Rimu)	cmawmbB289
Cla97C01G008890	Cucumber (Chinese Long) v3	cucwmbB361
Cla97C01G008890	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G008890	Melon (DHL92) v3.6.1	medwmbB001
Cla97C01G008890	Melon (DHL92) v3.6.1	medwmbB009
Cla97C01G008890	Melon (DHL92) v3.5.1	mewmbB004
Cla97C01G008890	Melon (DHL92) v3.5.1	mewmbB010