MELO3C024899 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C024899
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description30S ribosomal protein S10
Locationchr1 : 10020104 .. 10023315 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACACACACAAATTGGAAATTTATTTAGATAACGCTGCAGAAAAAATCATCCATTTCTTTCAGCTTCCGCCATCGATATTCAAAGCAACTTCCATGGCTATTTCTTCACTCTCTGCTACTATAATTCCATCTCCTACTCTATTTACTTCTTTATCATCCCATTCTTCTAAACCCAAATTTCTTCCCTTTCCTGGTTCATCTTCTACTGCTTTGAAGCTCAAACCCCTTCAATTTTCCTTGCCATCCACAAGGGTTTATGCTGCTCCTGAAGTTCTAGACTCCTCCGATACCATTGAACCACCTCCGGAAATCTTGGAGGGCTCTGGAGTTGCCACTCTCGAGGTTTGTGATAATTTTGTTCGGAATGGAGCAAAATGTTACAATTTTTCTTGGTTTTGTAATGGGTGTAAGAATGTTTGTTCTGGGTTATTTTTCCCTCCTTTTTTAAAATTTCCATTTTGTTTTCAATTGCATTGGAACTTGGACAATGTTTCTGTTTTATTTTTTTTTCTTTTTTTCTTTGCTAATGTTATGTTTATGTTTAGGGTGAAGATTTTGAGGTTCCTGGGACTTCAGCTCTCAGCATTGGTGAGGATGTGGATAAGGTAGATTTTATGTTTTTCAGATTACGTTTTACTCCAGCTTCTTGTGGCTTTCTGAAGATATAATATGTTATGCTGAGATACTTCTGATATCCAAACTGAACTCTTGAATATATATTGGTTCTGACGAGTTAAAGAAAGAATGGCCAGAAAATACATAATGGAATTATTTAATGAGATTATATTAGTATCTTCATTTGTCATTCTGCTAAGTTGAGTGGGTAAAGTCATATGCAAAATTTACATTTTATGTATAGTTGTAGTGTTGCCTTAGAAGCTAATAACATGCTTGGGAGTAATTCTAAAATGGTTTAAATCATTTTTTTTTTCATTTTCAAAACCACTCCAAAAATGCTTTTAATAATTCAAAATCAATTTTAATAGTATGAGAGCTGCGCCTAAGACTAGAGTATATAATTAAACATTGAATTGACTAGAGTATATAATTTTAAAGTGATTCTGAATAATGATAAAAATGATTCTAAATATTTCAAAATCACTCACAAACATGCACAAAACAAGGTGATTAATCTAATGCAATATTGAAAGTTTCTAATGTAGTGGGATTGGGTGGAATGTGGCAGTTCCATATTCCTTTGTATCCTAAAACAACCTCCTCAACCGGGTAGGGTATAGTCATTGACAATTGCTCCAGTGGCTGAATTTCTGTGACATTTGGCCCACTAGGATAATAGATATATGTATACACATTGGTACAAAATTGTGCTTTTACTGAAATAAACAAAAGAATACAAGGGCATACAAGTTTAGGATTCAAATACGAAAGAACAAGGACAAGATCATAGGTAAAAGAGGCCTAGCGAGCAAAGTTCAAGAGATGCCTAGAACCGAACCACTTCCGAAAATGGGTACCAAGATAGTCATTTTGTACCTTTATATTTACTGAACGTCGTTGTAGTTTTCAGTAAGTCTCAATGCTGTGTTATTTGATTTGTTTGATTATCTGTGTGGTAGGTGTGTCTAGATACTTGTGTCAGCTAATTGGTTTTGTAATTGATAGCCTCCATCTTTTTCTTATGCTTGGATAATTTTAACGAACCAAAGATGTTTGTGGTTTCAGCTGGCGCCGAAGCAGAAAATTAGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCTTGCAAGCAAATAATGGATGCTGCAAGGAATACAAATGCAAAAACCATGGGTCCTGTGCCATTACCTACAAAAAAGCGCATTTATTGTGTTCTTAAATCCCCTCATGTTCATAAGGATGCAAGATTCCATTTTGAAATCAGAACCCACCAACGCCTCATTGATATTTTGTACCCTACTGCCCAAACGATTGATTCTTTGATGCAACTCGACCTTCCAGCTGGTGTTGACGTGGAGGTCAAGCTATGAAGAGAACAGCTTCACCTAGGTAAAGAATTTAGTTTCCATAAGTTTATTATATATGGTGGTATTCCTTTTACTGCAATAAAGAAACAGGAAAGTTGGCCATAGGTACGAGGCAGAAAAGGAAGTGACATTTCAAGTTTATGTCTTGATAGAGCTGGGGTGAAAAAAGAGAGAAAATTTGGCCTTTGTTTTGATCATATCATATTACTAAGAAATAAAAGAATGAGTTGGAAGGAATGTTTTGTTTGAATTTTTTCCTTGTATTTGAGGGGAGGGGCTTTATTTGTTTTGGGTTCACATATAATTGTCTTTACCTAGCGCAAGGAAAAATTGAAAAACCGAAAAAACCACTTGATGGTGTCAGGTTGAAAATATTTATTAAAAATCTGCAAAACTTTTCGTTACGGTTTGGGTTAGGCAAAATAATAAACTGAGAAAACCTAAATGTCAAAAGAAGGCTCATGTGTGTCATGTTCCCACCTCCTCGAGCTGCCAATATCTCTCATGTA

mRNA sequence

ACACACACACAAATTGGAAATTTATTTAGATAACGCTGCAGAAAAAATCATCCATTTCTTTCAGCTTCCGCCATCGATATTCAAAGCAACTTCCATGGCTATTTCTTCACTCTCTGCTACTATAATTCCATCTCCTACTCTATTTACTTCTTTATCATCCCATTCTTCTAAACCCAAATTTCTTCCCTTTCCTGGTTCATCTTCTACTGCTTTGAAGCTCAAACCCCTTCAATTTTCCTTGCCATCCACAAGGGTTTATGCTGCTCCTGAAGTTCTAGACTCCTCCGATACCATTGAACCACCTCCGGAAATCTTGGAGGGCTCTGGAGTTGCCACTCTCGAGGGTGAAGATTTTGAGGTTCCTGGGACTTCAGCTCTCAGCATTGGTGAGGATGTGGATAAGCTGGCGCCGAAGCAGAAAATTAGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCTTGCAAGCAAATAATGGATGCTGCAAGGAATACAAATGCAAAAACCATGGGTCCTGTGCCATTACCTACAAAAAAGCGCATTTATTGTGTTCTTAAATCCCCTCATGTTCATAAGGATGCAAGATTCCATTTTGAAATCAGAACCCACCAACGCCTCATTGATATTTTGTACCCTACTGCCCAAACGATTGATTCTTTGATGCAACTCGACCTTCCAGCTGGTGTTGACGTGGAGGTCAAGCTATGAAGAGAACAGCTTCACCTAGGTAAAGAATTTAGTTTCCATAAGTTTATTATATATGGTGGTATTCCTTTTACTGCAATAAAGAAACAGGAAAGTTGGCCATAGGTACGAGGCAGAAAAGGAAGTGACATTTCAAGTTTATGTCTTGATAGAGCTGGGGTGAAAAAAGAGAGAAAATTTGGCCTTTGTTTTGATCATATCATATTACTAAGAAATAAAAGAATGAGTTGGAAGGAATGTTTTGTTTGAATTTTTTCCTTGTATTTGAGGGGAGGGGCTTTATTTGTTTTGGGTTCACATATAATTGTCTTTACCTAGCGCAAGGAAAAATTGAAAAACCGAAAAAACCACTTGATGGTGTCAGGTTGAAAATATTTATTAAAAATCTGCAAAACTTTTCGTTACGGTTTGGGTTAGGCAAAATAATAAACTGAGAAAACCTAAATGTCAAAAGAAGGCTCATGTGTGTCATGTTCCCACCTCCTCGAGCTGCCAATATCTCTCATGTA

Coding sequence (CDS)

ATGGCTATTTCTTCACTCTCTGCTACTATAATTCCATCTCCTACTCTATTTACTTCTTTATCATCCCATTCTTCTAAACCCAAATTTCTTCCCTTTCCTGGTTCATCTTCTACTGCTTTGAAGCTCAAACCCCTTCAATTTTCCTTGCCATCCACAAGGGTTTATGCTGCTCCTGAAGTTCTAGACTCCTCCGATACCATTGAACCACCTCCGGAAATCTTGGAGGGCTCTGGAGTTGCCACTCTCGAGGGTGAAGATTTTGAGGTTCCTGGGACTTCAGCTCTCAGCATTGGTGAGGATGTGGATAAGCTGGCGCCGAAGCAGAAAATTAGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCTTGCAAGCAAATAATGGATGCTGCAAGGAATACAAATGCAAAAACCATGGGTCCTGTGCCATTACCTACAAAAAAGCGCATTTATTGTGTTCTTAAATCCCCTCATGTTCATAAGGATGCAAGATTCCATTTTGAAATCAGAACCCACCAACGCCTCATTGATATTTTGTACCCTACTGCCCAAACGATTGATTCTTTGATGCAACTCGACCTTCCAGCTGGTGTTGACGTGGAGGTCAAGCTATGA

Protein sequence

MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL*
Homology
[Close]
BLAST of MELO3C024899 vs. Swiss-Prot
Match: RR10_MESCR (30S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum GN=RPS10 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.1e-65
Identity = 142/212 (66.98%), Postives = 155/212 (73.11%), Query Frame = 1 

Query: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPST------RV 60
           MA SSLS TI+ SP   ++ SS  +KP+       SS +   + L  S PS+      RV
Sbjct: 1   MATSSLS-TIVFSPLALSNSSSFPNKPQVSNLSLHSSLSNLRRTLSHSSPSSSSSSNVRV 60

Query: 61  YAAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKL 120
           +AAPEVL+S +T  P   + EGS              TSAL IG D D++APKQKIRIKL
Sbjct: 61  FAAPEVLESQET-GPESYVEEGSE-------------TSALGIGADSDQMAPKQKIRIKL 120

Query: 121 RSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTH 180
           RSYWVPLIEDSCKQIMDAAR TNAKTMGPVPLPTKKRI+CVLKSPHVHKDARFHFEIRTH
Sbjct: 121 RSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTH 180

Query: 181 QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 197

[Close]
BLAST of MELO3C024899 vs. Swiss-Prot
Match: RR10_ARATH (30S ribosomal protein S10, chloroplastic OS=Arabidopsis thaliana GN=RPS10 PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.6e-63
Identity = 136/211 (64.45%), Postives = 159/211 (75.36%), Query Frame = 1 

Query: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSS-----STALKLKPLQFSLPSTRVY 60
           MA+S++S+ ++PS  + +S S  S++ K    P SS     S+ +  KP   S+  T+V+
Sbjct: 1   MAVSTVSSFLLPSFGIPSS-SPSSTRLKVSLLPSSSTHGGLSSCVLTKP---SVSLTKVF 60

Query: 61  AAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLR 120
           A P      DT++P PEIL+            EVP +S++S+  D DK+APKQKIRIKLR
Sbjct: 61  AVP------DTLDPTPEILDEPAS--------EVPSSSSISV--DADKMAPKQKIRIKLR 120

Query: 121 SYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180
           SYWVPLIEDSCKQI+DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 121 SYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180

Query: 181 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           R+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 RMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191

[Close]
BLAST of MELO3C024899 vs. Swiss-Prot
Match: RR10_CYAPA (Cyanelle 30S ribosomal protein S10 OS=Cyanophora paradoxa GN=rps10 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.5e-32
Identity = 65/98 (66.33%), Postives = 84/98 (85.71%), Query Frame = 1 

Query: 109 KIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFH 168
           KIRI+LRSY   L+E+SC+QI++AA+ T+A  +GP+PLPTKK+IYCVL+SPHV KD+R H
Sbjct: 8   KIRIQLRSYDSSLLENSCEQIIEAAKRTDATAVGPIPLPTKKKIYCVLRSPHVDKDSREH 67

Query: 169 FEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           FEIR H+R+ID+  P+++TID+L +LDLPAGVDVEVKL
Sbjct: 68  FEIRVHRRIIDLYLPSSKTIDTLTRLDLPAGVDVEVKL 105

[Close]
BLAST of MELO3C024899 vs. Swiss-Prot
Match: RS10_CYAP7 (30S ribosomal protein S10 OS=Cyanothece sp. (strain PCC 7424) GN=rpsJ PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.7e-32
Identity = 62/100 (62.00%), Postives = 84/100 (84.00%), Query Frame = 1 

Query: 107 KQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDAR 166
           +QKIRI+L+++   L++ SC++I+D A  TNA  +GP+PLPTK+R+YCVL+SPHV KD+R
Sbjct: 6   QQKIRIRLKAFDRRLLDTSCEKIVDTANRTNATAIGPIPLPTKRRVYCVLRSPHVDKDSR 65

Query: 167 FHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
            HFE RTH+R+IDI  P+++TID+LM+LDLPAGVD+EVKL
Sbjct: 66  EHFETRTHRRIIDIYQPSSKTIDALMKLDLPAGVDIEVKL 105

[Close]
BLAST of MELO3C024899 vs. Swiss-Prot
Match: RR10_PORPU (30S ribosomal protein S10, chloroplastic OS=Porphyra purpurea GN=rps10 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.4e-32
Identity = 64/98 (65.31%), Postives = 82/98 (83.67%), Query Frame = 1 

Query: 109 KIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFH 168
           KIRIKL++Y   L+  SCK+I+D A  TNA  +GP+PLPTK+RIYCVL+SPHV KD+R H
Sbjct: 8   KIRIKLKAYNSSLLNTSCKKIVDTAERTNAIAVGPIPLPTKRRIYCVLRSPHVDKDSREH 67

Query: 169 FEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           FEIR+H+R+IDI  P++QTID+LM+L+LP+GVD+EVKL
Sbjct: 68  FEIRSHRRIIDIHQPSSQTIDALMKLNLPSGVDIEVKL 105

[Close]
BLAST of MELO3C024899 vs. TrEMBL
Match: A0A0A0LEH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G769090 PE=3 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 7.6e-108
Identity = 200/206 (97.09%), Postives = 202/206 (98.06%), Query Frame = 1 

Query: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 60
           MAISSLSATIIPSPTLFTSLSSHSSKPKF PFP SSSTALKLKPLQFS PSTR+YAAPEV
Sbjct: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFPPFPASSSTALKLKPLQFSFPSTRLYAAPEV 60

Query: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120
           LDS DTIEPPPEILEGSGV+TLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSPDTIEPPPEILEGSGVSTLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 207
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MELO3C024899 vs. TrEMBL
Match: W9QQJ9_9ROSA (30S ribosomal protein S10 OS=Morus notabilis GN=L484_018244 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 6.0e-73
Identity = 153/213 (71.83%), Postives = 168/213 (78.87%), Query Frame = 1 

Query: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGS-SSTALKLKPLQFSLPSTRVYAAPE 60
           M +SS+SAT+IPS +L  S    SSKPK   F    ++ + KL+ L+ S PSTRVYAAPE
Sbjct: 1   MTVSSVSATLIPSLSLSNSSPFSSSKPKLSAFSLQFANCSPKLRALKPSQPSTRVYAAPE 60

Query: 61  VLDSSDTIEPPP------EILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIK 120
           VL      EPPP      E L+GSG   +E  D E P TS+LS+G D DK APKQKIRIK
Sbjct: 61  VL------EPPPETLDGSETLDGSGADGVEVGDSETPSTSSLSVGADADKAAPKQKIRIK 120

Query: 121 LRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRT 180
           LRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRI+CVLKSPHVHKDARFHFEIRT
Sbjct: 121 LRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIHCVLKSPHVHKDARFHFEIRT 180

Query: 181 HQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           HQRLIDILYPTAQTIDSLMQLDLPAGVDVE+ L
Sbjct: 181 HQRLIDILYPTAQTIDSLMQLDLPAGVDVELVL 207

[Close]
BLAST of MELO3C024899 vs. TrEMBL
Match: M5WVB4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011713mg PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 6.7e-72
Identity = 150/207 (72.46%), Postives = 166/207 (80.19%), Query Frame = 1 

Query: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFP-GSSSTALKLKPLQFSLPSTRVYAAPE 60
           MA+SS+SA +IPS  L  S    SSK     F   S++ ALKL+ L+ S  STRVYAAPE
Sbjct: 1   MAVSSMSAILIPSLPLTNSSPFPSSKLNVSSFALPSANNALKLRALRPSQSSTRVYAAPE 60

Query: 61  VLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWV 120
           VL+S +++ PPPE        TLE    E P TS+L++G D DK +PKQKIRIKLRSY+V
Sbjct: 61  VLESQESLVPPPE--------TLEVGSSETPSTSSLNVGGDADKASPKQKIRIKLRSYFV 120

Query: 121 PLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 180
           PLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID
Sbjct: 121 PLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 180

Query: 181 ILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           ILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 ILYPTAQTIDSLMQLDLPAGVDVEVKL 199

[Close]
BLAST of MELO3C024899 vs. TrEMBL
Match: A0A067L5B3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01016 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.8e-70
Identity = 150/220 (68.18%), Postives = 167/220 (75.91%), Query Frame = 1 

Query: 1   MAISSLSATIIPS-----------PT---LFTSLSSHSSKPKFLPFPGSSSTALKLKPLQ 60
           MAISS++ T+IPS           PT   LF+S SS SS      F  S+++   L  L+
Sbjct: 1   MAISSITTTLIPSLATSSSFASKQPTQTKLFSSSSSSSSS-----FSNSANSVFSL--LK 60

Query: 61  FSLPSTRVYAAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAP 120
            S  + RV A PE LDS++ +E PPE ++ S   T +  D E P + +LSIG D DKLAP
Sbjct: 61  ISSSTIRVLAVPETLDSAEPLETPPETVDESDPDTFQIGDSETPSSPSLSIGADADKLAP 120

Query: 121 KQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDAR 180
           KQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDAR
Sbjct: 121 KQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDAR 180

Query: 181 FHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           FHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 FHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 213

[Close]
BLAST of MELO3C024899 vs. TrEMBL
Match: I3S9B7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.4e-69
Identity = 145/206 (70.39%), Postives = 162/206 (78.64%), Query Frame = 1 

Query: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 60
           MA+SS SA I+PS     SLS+ S KPKF      S   L+L  L+    ST + AAPEV
Sbjct: 1   MAVSSFSAAIVPS----LSLSNSSPKPKFPSLSFLSGNTLRLTTLKPLHSSTVLKAAPEV 60

Query: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120
           LDS++T+E      + S  +TL+  D   P TS++SIG D D +APKQKIRIKLRSYWVP
Sbjct: 61  LDSTETLE------DDSESSTLQVGDLGTPSTSSISIGGDADAMAPKQKIRIKLRSYWVP 120

Query: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180
           LIEDSCKQI++AARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQILEAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 207
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 196

[Close]
BLAST of MELO3C024899 vs. TAIR10
Match: AT3G13120.1 (AT3G13120.1 Ribosomal protein S10p/S20e family protein)

HSP 1 Score: 243.8 bits (621), Expect = 9.2e-65
Identity = 136/211 (64.45%), Postives = 159/211 (75.36%), Query Frame = 1 

Query: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSS-----STALKLKPLQFSLPSTRVY 60
           MA+S++S+ ++PS  + +S S  S++ K    P SS     S+ +  KP   S+  T+V+
Sbjct: 1   MAVSTVSSFLLPSFGIPSS-SPSSTRLKVSLLPSSSTHGGLSSCVLTKP---SVSLTKVF 60

Query: 61  AAPEVLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLR 120
           A P      DT++P PEIL+            EVP +S++S+  D DK+APKQKIRIKLR
Sbjct: 61  AVP------DTLDPTPEILDEPAS--------EVPSSSSISV--DADKMAPKQKIRIKLR 120

Query: 121 SYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180
           SYWVPLIEDSCKQI+DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ
Sbjct: 121 SYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180

Query: 181 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           R+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 RMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191

[Close]
BLAST of MELO3C024899 vs. TAIR10
Match: AT3G45030.1 (AT3G45030.1 Ribosomal protein S10p/S20e family protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.0e-06
Identity = 35/118 (29.66%), Postives = 56/118 (47.46%), Query Frame = 1 

Query: 90  PGTSALSIGEDVDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTK 149
           PG + L      + L    KIRI L S  V  +E  C  ++  A++   +  GPV +PTK
Sbjct: 10  PGKAGLE-----EPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTK 69

Query: 150 KRIYCVLKSPHVHKDARF-HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
                  K+P       +  FE+R H+R+ID L+ +   +  +  + +  GV+VEV +
Sbjct: 70  VLKITTRKAPCGEGTNTWDRFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121

[Close]
BLAST of MELO3C024899 vs. TAIR10
Match: AT5G62300.1 (AT5G62300.1 Ribosomal protein S10p/S20e family protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.0e-06
Identity = 35/118 (29.66%), Postives = 56/118 (47.46%), Query Frame = 1 

Query: 90  PGTSALSIGEDVDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTK 149
           PG + L      + L    KIRI L S  V  +E  C  ++  A++   +  GPV +PTK
Sbjct: 10  PGKAGLE-----EPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTK 69

Query: 150 KRIYCVLKSPHVHKDARF-HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
                  K+P       +  FE+R H+R+ID L+ +   +  +  + +  GV+VEV +
Sbjct: 70  VLKITTRKAPCGEGTNTWDRFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121

[Close]
BLAST of MELO3C024899 vs. TAIR10
Match: AT3G47370.2 (AT3G47370.2 Ribosomal protein S10p/S20e family protein)

HSP 1 Score: 49.7 bits (117), Expect = 2.6e-06
Identity = 31/99 (31.31%), Postives = 50/99 (50.51%), Query Frame = 1 

Query: 109 KIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 168
           KIRI L S  V  +E  C  ++  A++   +  GPV +PTK       K+P       + 
Sbjct: 22  KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81

Query: 169 HFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 207
            FE+R H+R+ID L+ +   +  +  + +  GV+VEV +
Sbjct: 82  RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119

[Close]
BLAST of MELO3C024899 vs. NCBI nr
Match: gi|659126003|ref|XP_008462962.1| (PREDICTED: 30S ribosomal protein S10, chloroplastic [Cucumis melo])

HSP 1 Score: 408.7 bits (1049), Expect = 6.1e-111
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1 

Query: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 60
           MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV
Sbjct: 64  MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 123

Query: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120
           LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 124 LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 183

Query: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 184 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 243

Query: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 207
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 244 LYPTAQTIDSLMQLDLPAGVDVEVKL 269

[Close]
BLAST of MELO3C024899 vs. NCBI nr
Match: gi|449465511|ref|XP_004150471.1| (PREDICTED: 30S ribosomal protein S10, chloroplastic [Cucumis sativus])

HSP 1 Score: 397.9 bits (1021), Expect = 1.1e-107
Identity = 200/206 (97.09%), Postives = 202/206 (98.06%), Query Frame = 1 

Query: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 60
           MAISSLSATIIPSPTLFTSLSSHSSKPKF PFP SSSTALKLKPLQFS PSTR+YAAPEV
Sbjct: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFPPFPASSSTALKLKPLQFSFPSTRLYAAPEV 60

Query: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120
           LDS DTIEPPPEILEGSGV+TLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSPDTIEPPPEILEGSGVSTLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180
           LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 207
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MELO3C024899 vs. NCBI nr
Match: gi|1009169482|ref|XP_015865689.1| (PREDICTED: 30S ribosomal protein S10, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-78
Identity = 155/207 (74.88%), Postives = 172/207 (83.09%), Query Frame = 1 

Query: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFP-GSSSTALKLKPLQFSLPSTRVYAAPE 60
           MA+SS+SAT++PS  L  S     S PK   F   S++ +LKL+ L+ S   TRVYAAPE
Sbjct: 1   MAVSSISATLVPSLPLPKSSPFSHSNPKLSSFSLASANCSLKLRALKPSQSFTRVYAAPE 60

Query: 61  VLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWV 120
           VL+S DT++PPPE L+GSG    E    E+P TS+LS+G D DKLAPKQKIRIKLRSYWV
Sbjct: 61  VLESQDTLQPPPETLDGSGSDASEVGGSEIPSTSSLSVGADADKLAPKQKIRIKLRSYWV 120

Query: 121 PLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 180
           PLIEDSCKQI+DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID
Sbjct: 121 PLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 180

Query: 181 ILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           ILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 ILYPTAQTIDSLMQLDLPAGVDVEVKL 207

[Close]
BLAST of MELO3C024899 vs. NCBI nr
Match: gi|657953696|ref|XP_008364077.1| (PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Malus domestica])

HSP 1 Score: 285.0 bits (728), Expect = 1.0e-73
Identity = 153/207 (73.91%), Postives = 169/207 (81.64%), Query Frame = 1 

Query: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFP-GSSSTALKLKPLQFSLPSTRVYAAPE 60
           MA+SS+S+ +IPS  L  S +  +SKPK   F   S++ ALKL+  + S  STRVYAAPE
Sbjct: 1   MAVSSMSSILIPSLPLSNSSAFPTSKPKLSSFALPSANNALKLRASRPSQSSTRVYAAPE 60

Query: 61  VLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWV 120
           VL+S +T+ PPPE        TLE    E P TS+LSIGED DK +PKQKIRIKLRSY+V
Sbjct: 61  VLESQETLIPPPE--------TLEVGSSETPSTSSLSIGEDGDKASPKQKIRIKLRSYFV 120

Query: 121 PLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 180
           PLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID
Sbjct: 121 PLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 180

Query: 181 ILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           ILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 ILYPTAQTIDSLMQLDLPAGVDVEVKL 199

[Close]
BLAST of MELO3C024899 vs. NCBI nr
Match: gi|658028895|ref|XP_008349887.1| (PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Malus domestica])

HSP 1 Score: 283.5 bits (724), Expect = 3.0e-73
Identity = 152/207 (73.43%), Postives = 169/207 (81.64%), Query Frame = 1 

Query: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFP-GSSSTALKLKPLQFSLPSTRVYAAPE 60
           MA+SS+S  +IPS  L  S +S +SKPK   F   S+++ALK++  + S  STRVYAAPE
Sbjct: 1   MAVSSMSTILIPSLPLSKSTASPTSKPKLSSFSLPSANSALKVRASRPSQSSTRVYAAPE 60

Query: 61  VLDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWV 120
           VL+S +T+ PPPE        TLE    E P TS+LSIG D DK +PKQKIRIKLRSY+V
Sbjct: 61  VLESPETLVPPPE--------TLEVGSSETPSTSSLSIGGDGDKASPKQKIRIKLRSYFV 120

Query: 121 PLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 180
           PLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID
Sbjct: 121 PLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 180

Query: 181 ILYPTAQTIDSLMQLDLPAGVDVEVKL 207
           ILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 ILYPTAQTIDSLMQLDLPAGVDVEVKL 199

The following BLAST results are available for this feature:
BLAST of MELO3C024899 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RR10_MESCR5.1e-6566.9830S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum GN=RPS... [more]
RR10_ARATH1.6e-6364.4530S ribosomal protein S10, chloroplastic OS=Arabidopsis thaliana GN=RPS10 PE=2 S... [more]
RR10_CYAPA1.5e-3266.33Cyanelle 30S ribosomal protein S10 OS=Cyanophora paradoxa GN=rps10 PE=3 SV=1[more]
RS10_CYAP75.7e-3262.0030S ribosomal protein S10 OS=Cyanothece sp. (strain PCC 7424) GN=rpsJ PE=3 SV=1[more]
RR10_PORPU7.4e-3265.3130S ribosomal protein S10, chloroplastic OS=Porphyra purpurea GN=rps10 PE=3 SV=1[more]
BLAST of MELO3C024899 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEH6_CUCSA7.6e-10897.09Uncharacterized protein OS=Cucumis sativus GN=Csa_3G769090 PE=3 SV=1[more]
W9QQJ9_9ROSA6.0e-7371.8330S ribosomal protein S10 OS=Morus notabilis GN=L484_018244 PE=3 SV=1[more]
M5WVB4_PRUPE6.7e-7272.46Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011713mg PE=3 SV=1[more]
A0A067L5B3_JATCU2.8e-7068.18Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01016 PE=3 SV=1[more]
I3S9B7_LOTJA2.4e-6970.39Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
BLAST of MELO3C024899 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G13120.19.2e-6564.45 Ribosomal protein S10p/S20e family protein[more]
AT3G45030.12.0e-0629.66 Ribosomal protein S10p/S20e family protein[more]
AT5G62300.12.0e-0629.66 Ribosomal protein S10p/S20e family protein[more]
AT3G47370.22.6e-0631.31 Ribosomal protein S10p/S20e family protein[more]
BLAST of MELO3C024899 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659126003|ref|XP_008462962.1|6.1e-111100.00PREDICTED: 30S ribosomal protein S10, chloroplastic [Cucumis melo][more]
gi|449465511|ref|XP_004150471.1|1.1e-10797.09PREDICTED: 30S ribosomal protein S10, chloroplastic [Cucumis sativus][more]
gi|1009169482|ref|XP_015865689.1|1.4e-7874.88PREDICTED: 30S ribosomal protein S10, chloroplastic [Ziziphus jujuba][more]
gi|657953696|ref|XP_008364077.1|1.0e-7373.91PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Malus domestica][more]
gi|658028895|ref|XP_008349887.1|3.0e-7373.43PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001848Ribosomal_S10
IPR018268Ribosomal_S10_CS
IPR027486Ribosomal_S10_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009902 chloroplast relocation
biological_process GO:0044711 single-organism biosynthetic process
biological_process GO:0009657 plastid organization
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0044763 single-organism cellular process
biological_process GO:0006412 translation
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0015979 photosynthesis
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU48585melon EST collection version 4.0transcribed_cluster
MU58263melon EST collection version 4.0transcribed_cluster
MU66763melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024899T1MELO3C024899T1mRNA
MELO3C024899T2MELO3C024899T2mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU48585MU48585transcribed_cluster
MU66763MU66763transcribed_cluster
MU58263MU58263transcribed_cluster