MELO3C024729 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024729
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial NADH-ubiquinone oxidoreductase
Location	chr11 : 7260187 .. 7267605 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTCACATCCGTGGTTTTTACTTTAAGCTCCCCGGGCCGTAGCTCTTCGCGCTCTCTCTTTCTCTCTCAGCTCAGGTTGTGCGTTTGATCGGTGGATCAATGGCGTCAAGTCTGTTCAAATTGCTTCTTGAATCTTCTTCTAATATCCCATCTTCTACTAGAAATCTGAGTCTTGTTGCCAATCAAATCGGCCAGCACACCGCCAAATGGATGCAGGTATCCACTAATTTCTCGCTAATCCCCCCTTTCGAAATCTACTTCTTCTACGCCCGTGTTTGAGTTGATTTCTGTTGGTTCTGTATTCTCGTTTACAGTTCGTTATTCTTTCTAACGTTACCTAATAACCGATTTAGAGCTTGGGCCTGAAGGCTCCTTTAATGTTGTTTTCGTAAATCGATTGTCTTTATGTGGAAATTAATTCGTGTTATTTTAAGAGAAGAGAAGAGAAGACAAGAGAAAGAATCTTTTTTTCCAGTGGCATTGATGGATGCTAAACCTTTTGGTGGTCGTTTATCGAAGTAAATTTATCTATATTATACAAATATTTTATTTCATTAGCTTTCGTGCCCCCCATCCCTACTTAGACCATGTCTTATCTTCTTCATGTTTTGTGGATTTTATGTGTACATGAAAATTATCAGAGAATATGCCTTTCAACCTTTAGAAATATTAACTTTTTCATTGATATTTGAGAAGTTACGAACGATTGACTTCCTAAAGAATGCATAAAAGTAGAAAAGAGAAACTCCTTCAGGTTGTATTCATGCTGCTTGCAGCCTAAGAAAACAAAAAAGAGAAGAGCTGTCATGAATGACTAGGTAGGGAACCCCTTAACAAATGGAAGGTCCTGTGGCTGTTGATGTTGATGGCTTTCATATCTTCTCAATTTTTTTTGAACAAGATACTAGAGGCAATGAGTAGGTGCATTAGAATATCTCAACTAGATCGACACCTCCATAACATCCTCATCATCTCCCACATATCTTCTCAATTATTATTATTACTATTTGTAAGAAAACAATTTTTATTAAGATACAGGCCATGAAGAGACAATCCGAGGCAAAAAGGAATTATGACTACCAAAAGAGGTTCTAATTATCAAGAACCAAAAATAAAGGAAATTTACAAAGTACATACTAATAGTAATGGTACTGGAAGACACTTAGATAGAGGTATTGAATAAGCCAATCCTCACATCCCCTCCGAAGAATCCTTGACCTTTTAAGAATCCTCCACTTTCTTTCAAACCAAATGTACCCAAAGCTATAAGCTGCTTGCCTCATAATTTCCCCTTTACCATCAATGCATTTGCATCCTCCATTTTTGAACAATAATCCTTTTGTTGAACCAAGCGAACACCAAATTTTGAGATCTATTCCCCCACCCCACACGCACGAGATAAGAAGCAAATTTTATTGATGTGAAATTTACAAAAGAAGCATGATGGCCAAATCAAAAATGATTTCTCCAATTGGTCAAATATATCTCACATGTTTATTGCCATGTGACATATTTATAGAGATCTTGCCCTGAATTATTTCCAGAGAGATTGCTTTTGACTTTCGAGGTGTGTTTTGTGTGGGTATGGCCATATGGGAAAAATACTGAAACTATGTTTCAGGGTATGTTTTCTTTCTTAATGAGTATGCAGTTGTTCTTGGAATTCTTTTGGATTATTTGCTATTTGAGGTCGAGCATTCATGACACAATCAATGAAGTTGTTCAGGTTGAAAATGGGGTTCTTTGCATTAGTTTATTTGGCTAGAAAGGGACAACATAGGAATGTTTGTGCAATTAAATGAATGGAGTGTTGATATTTTGGGTTTGATGTAAGCTATTTTTTGGTCTCTTAACTCAAATTGAAGAACTGGTTCATTATTATATCCCTTTTCTATATTTTCTCTTTTTTCTTTTTCTTTCTTTCTCTCTGTTCTTTTTTCTTTTTTTTTGGTTGCCTAAAGTTGGAGGTCTTTGTTGTGAATTCTATTTAGCTTCCACTTTTTGTTTGGCCTTGGCAGTGAGCGTATGTTTTCTTTTGTTTCTCTCAATAACAATTGAATTTTCTAGTTCAATTCCATGACTGTAGGCGGCCATATAACTAGAGCAAATTGAAGTATTAGGAATTTCATGCACTGGTGAATGAAGTTAACTTATTGGATTAGACGTTAAGATGGTACTTTTTCATTTGGGTTGTTGAAAATTGCCATGAGCCTCCTTCCCTAGTTTTGGTAAAGTTGTATTTGAAGCTCTTGCCTATTATTAACCTGGGTTTCTGATTAATTGCCCTTTCTCTATGTTAATGTGCTTACAGCTGCACTATCTTGTTTGTACAGAGTGATAGTGGTTATTTTGGGTGCCTTGTCAATTTTGTGAGTCACACCTCAGTTACTATATTTTTCAAGATATCAAGTATGCATTGCACCACTTTAAGCCCTTGTTTAAGGAATAGTCCGTTTGGGCACCTCCAGTGCATTTAAATTTCTTGTTCATGCATACGAGAAGACTATGCCAAGTAAATATTTGACTGATCCATTTGCTACTTGATGGTAGCAATATCCTGTTGAGCATGACTTCAATTCAAGGAAGTTGCACAGTACCCCTTTTACTGGTCTTGAAGAACATGTAGTGTAGATTGAACTCCACATTTACAATATTAAGATCGTTTCCTAGCATGTCAACAATATTCTTAAATACACGGTTGATCTGTTTGAGATAATCTTTGGGAAGGTTTTTGTTAGACCTCCAATAATGTTACAATACAGTAGGAGAGGGAAGAGAGAGAAAGCACACGTAATTGGGAGTGTTAGCGCTAGTGCTGGGGCCCACAGGTAGTTAGGAGGGAAGGGGGAGGTTCAAATAGAAGGGAGAGCATCTGTGAGGGGGGGAAATGATTTTCAGAGTGGGCTGTTGCATCCTTGAGAGAAAGGATAAACAGAGAGAGAAACTTTGTTCTTCTTGTTGATGTAATTTCCATTCCGAATTGATACTTCATCAATTCGTTACTGTATTGCTTTCAAACTACCAATTGGTTAAAGAACAGTCCTATCAGTGTTCTATCAGTTTTCTTGCAGTGGCAGTATGGATAATGTAAATTGGGAGACTATTCAACACTTTCTAAATTGATGGGTGGTCTTGACATTAGTAACTTTCGGCATTGTGATTATGTATTATTGGCTACATGAATATGGATATTTTGCCCAAAAGAGAGTGCTTTATGGTGGAAGCTTGTTGATGCTAAGTAGTATGCATCTATGATGAGACGAGTTTACCAAGATCTATTCGATTAGATTCTTTTAATCCCCCTGGAGATTTATTTGTAAGATTATTGACCTGGTTGCTAGTGTGCTTGGGATTGTCTTGGTAATGGGATCTCTACTTTTTGGAAGACCTCTTAGCTTAGTCGTGGTTCTATCATGATTGTTGTCCGTCGACTATTTTGCCTTGCTCTTTATCTTGATGCTACAGTGGCTGATGTGTGGGCTTCGGAAACTGGTGCTTGGGTTTACGTTTTTTCTGTAATCTTAATGATTTGTAAATGATTGAATGGGCTAATCTTTCTCATCTATTTGTCCTGTTGCACCTTTATGCTCTATTCAATCACTTATAGCTTATAGTTTATCTTACTTGATTTCAAATTGGAGAACTTGTAATTCACCTATAGCTGTTTGGGATTTTACTCTATTTTATTCATCAATGAAATTATTTGTTCATCCAAAAATGAAAGGTTCTCAACTATAGAATGCATGTTTGACATGAACCCTTGTCCCTTGTGAATCTCTAGGAAATCATGAGCGAGACCCTAGGGTTTCTGTTGAATGTTCTTTCCAACCCAACATTTCATTGCCTTGCAGTGGGAATGTCACAGTTTGAAGAATTTGTGCTTCAAAGGAAACAATTATCTTTGATTTTTTTAACAGTCGTCTAATCTGTTGCACAGTTGCAGCATGTACCGTTCTCATGCACTTGAAGCTTAAATCAACCCTTCAAGTCGGAGAATGTCATTAGCAGAAACTTTATGTCACTCTAGTGATATGATGAATCCGATCAGCTTTTGGTTGAAATATGAGACTAGAGGACTCTTTGTTGCATAAGATTTTGCATCCATGTCCATTAACTAGGAAGGATTGAGTCAGTCTGACAATGGATATTTTTCCCTCTATCATTCCAATTTTGTCGGATGTCCCCAAAGGGACAACAATGGATATTTTTCCTATTTGTAGCACGTACAATTTCTAGATTTATTAAATTAATTTAGATAATTTGGACTTCCTTCAAATGCTCTAGAGTATATGAGAACTATCCACGGTTTCTTATTATTTTAAGTCTAGGATTCTTTCCACAGATCAATTCTTCATAGCCCTCACGCATTTTCACATTTTCAAGAAGTTTTGAGGGTCCCATTCGTGTTCTCACAATTGAAAGAATCGTGATTGCTTGGGAAGTCTTCAAGTAGGTTATTCATCAACATCTTCTGTGTTGCTTAACTATTCTACATGTATTAGCTCGTTGAGTTATCCCTATGCTCAAAGCTGGTAGTTAAATTTTTGTTTCCTCTTTAGTTACATACTCTGGATTGCAGGCTGTCAGCACGTTTTATAACTGCATCAATTTCAATGGCCTTGTTTATTATCTATCCCATGTGAGCTCTGTAATAAATGATTTGTTATTATGCTTTTGGGATTAAGCCAACATTCTTCCTTTAAGGAGATGCTCATTTTCTGCCTTAAGATTTTATCGACAGTTTATTATATAACACAAATCAAGCCCTCATACCAGATATCAACATTCTTCCTTTAAGAAGACGCTATTTTCAAGGAAAAGTGAACCAAGTGAAGGATCTTCTTTTAGATAATAAGAGGCATAGTTTTGGAATGTTATGGCTCTACGGCTGTAAGAAAATTTTGGATGCCTAGATGTAAATAAGAAGACAAACGGGTAGTAACAAATTTCTGTAATAATCCATACTCTTGTCTGCAAAGATTGCAATGGAAGAAGGTTTGGGCGTGGATGTTATCAATTAGAGATACAAAACACAAAAGGACCTCCTACTATATCTTAACATACAGATTAATCGAACAAGCTGAAACCCATGTCGTCATCGGACTCCTCAGCTGGCTCTTCCTTCTTCTCAACAGCTGCAGCAGCTTCTGTGGCAGACCCAGAATCAGCAGCAGACACGGCCACAGCAACAGCAAACTTGTTAGGATCCGCAAGATACTCTTTAACCTTCTCAGCCTGGGGGAAGGAATAGTCGGTAGCAACTGCAACAGCAAGAAGGTTTTTGTATGCATTGATGAGCATGTGTGGTGCAGCAACCAGAGTTGGGTATGAAATGGCCAACGAAAAAGATGTAACCGTGGAAACACCCAATGAAAACTTTTCAAGGAGATCATCCTCGGTCAGATCGAGCACCTGAGGGCTAAAGACTGATCCATTGTCATAAACAGAGAGGACAACAAGACCATATGAGAATGGCCTGATTCCTAGCTTGGCAAGGAGAGCAGCAGCTCTAACAACTCAGAAGATCCAACCTTATCACCCTTCTTAATGAGCTCCACAGGAGTGATAATTTCGACAGTATCCTTGTTAATCTTGGTTGGAATATTAAGAACCTGGAAGAAAGAGGTCTGAGATGGATCAAGCCCTGTGTTGCCTGGTAGAAAGATGACATCAATTGGAGCAAGCAAACCAACACGAGCAGGGGCTCCAACCTTGTATTTGGCCACCTCTTCACTGACTTCCTTCAAATCACCCTTGGTGAAGATCAAACCAACGTTGCCCACAAGAAAGGGAAGAAGGTTGAGGTAAGACTTGTTACCAGTCTGCTCAGAGTGGATCCTCACCAAGCGCTTCATCATGGTGTTTTTCCCCATGAGCACAATGGAATCACCACAGAGACCCTTCCTAATGTTCTGGAGCTGGTTGGATCCGACATTGTCAGCGGCCACAACCAAGACCTGGCTATAATCATCGAGAAGCTGACAGAACTTGGAGTCGTAGGCGACCTTCTTTTCAGCCTTGGTGGGTTTGATAGCCATTGAAATGGGTAAAATTCTAAGATACAACAAAAAAGGGGGTTAAAAAGAAAGAAAAAAAGCAAAACTGAGGGACAAGACGAAGCTGGATGCTCTGCCAAGGCAGACAGCAAAGCTATGCCATCTCTTTAACCTGTGTAATGCTAAGAAGCGTTTTTAAGGGTTTTGGACAACTCCTGGGGAGCTTAAAAGGCTGGTAGCAGTTGATGTTATCAATTAGAAGTCCTTAAATATAGTTTGTGATATCACAAACTTAATTTGTGGTTCACAACTAATTATTTTGGAACTGACGTAAACCAAATTCAATATTATAAACAATAAAATAATGATATTTTGTAACAAAGAACTGTTTTTTAGCCCAAATATTCTTTTTAGCTTGCCTGTCATCTCCCACATTTTCAAGTGATATCTCATGGCCTAATTTTGCTTATGGAAATTTTCTCTTGATCACTGTTCTGTATTGATAATTCATACATTGTTTGACATTTTGCAAGTTGAATTTTGTTTGGCATGACCTCAATATTTTGCTTTCCGCCATCTGTATCCTTAAATTATTGAGTGTCTATCAAGTTCTACTGACTGTTGCGACATGTTATAGTTCTTTCTCAATTTATTTCATTTACTTCTAATAAATATCCTTCCATTTGCTGGGCATCTGATATTACCCTTTGTGATCCTGTCCAATGCTGAAGGATATATGAAACTTTTTATCTTATTTCCATCTCTAGGATACAAGTAAGAAATCACCCATGGAGTTGATCAATGAGGTTCCACCAATCAAGGTTGAAGGCCGCATCGTTGCTTGTGAAGGAGGTTAGTACCTTAGTACGTCTCTATACTTGTATCAACGCATGCATATTTTTCAAGTAAATGATTTATTACAGAAGGTATGATTCCTTATTTGGATTCAAAATCTTGCTGAATGCAGACAGCAATCCTGCCCTTGGACATCCAATTGAGTTCATATGCCTCGATCGGGAAGAGCCCGCTGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAGAAAATGTGCAAATGATTATTCCAGCAAGCAACCCGGAACTTAAAGTCTATTGTACCTTTCTAAACTCGACTTCTGTAATGGTTTATACTATTGGCTGCATAAATTAGGAATTTAAGAATTCCATTCACTAAGCACTTTGGACGGGTCCATTGTCTTTTGCCAAATTTGTTCTATTGCTCTGTCTAGTGAACATATCTTGTTGATTCTAATACACAATAAAAGGTTTTTGATCTCTTGGGAGTTGCAACCTTGAAATGGGATTTTTTATGGATCGCGCTTTTTAAGGTCGCAAATGGAATTTGGCGCAGTGGTGTTTGAAATCAAATGAAAATTTTCCTTTCGTACG

mRNA sequence

GGTCACATCCGTGGTTTTTACTTTAAGCTCCCCGGGCCGTAGCTCTTCGCGCTCTCTCTTTCTCTCTCAGCTCAGGTTGTGCGTTTGATCGGTGGATCAATGGCGTCAAGTCTGTTCAAATTGCTTCTTGAATCTTCTTCTAATATCCCATCTTCTACTAGAAATCTGAGTCTTGTTGCCAATCAAATCGGCCAGCACACCGCCAAATGGATGCAGGATACAAGTAAGAAATCACCCATGGAGTTGATCAATGAGGTTCCACCAATCAAGGTTGAAGGCCGCATCGTTGCTTGTGAAGGAGACAGCAATCCTGCCCTTGGACATCCAATTGAGTTCATATGCCTCGATCGGGAAGAGCCCGCTGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAGAAAATGTGCAAATGATTATTCCAGCAAGCAACCCGGAACTTAAAGTCTATTGTACCTTTCTAAACTCGACTTCTGTAATGGTTTATACTATTGGCTGCATAAATTAGGAATTTAAGAATTCCATTCACTAAGCACTTTGGACGGGTCCATTGTCTTTTGCCAAATTTGTTCTATTGCTCTGTCTAGTGAACATATCTTGTTGATTCTAATACACAATAAAAGGTTTTTGATCTCTTGGGAGTTGCAACCTTGAAATGGGATTTTTTATGGATCGCGCTTTTTAAGGTCGCAAATGGAATTTGGCGCAGTGGTGTTTGAAATCAAATGAAAATTTTCCTTTCGTACG

Coding sequence (CDS)

ATGGCGTCAAGTCTGTTCAAATTGCTTCTTGAATCTTCTTCTAATATCCCATCTTCTACTAGAAATCTGAGTCTTGTTGCCAATCAAATCGGCCAGCACACCGCCAAATGGATGCAGGATACAAGTAAGAAATCACCCATGGAGTTGATCAATGAGGTTCCACCAATCAAGGTTGAAGGCCGCATCGTTGCTTGTGAAGGAGACAGCAATCCTGCCCTTGGACATCCAATTGAGTTCATATGCCTCGATCGGGAAGAGCCCGCTGTGTGCAAGTACTGTGGCCTGCGCTATACTCAGGACCATCACCACTAG

Protein sequence

MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH*

Homology

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BLAST of MELO3C024729 vs. Swiss-Prot
Match: NDUS6_ARATH (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidopsis thaliana GN=At3g03070 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.1e-39
Identity = 78/111 (70.27%), Postives = 85/111 (76.58%), Query Frame = 1


Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINE 60
           MAS+L K L+ S   +PSS RN S+   Q        +G HTAKWMQD SKKSPMELI+E
Sbjct: 1   MASNLLKALIRSQI-LPSSRRNFSVATTQLGIPTDDLVGNHTAKWMQDRSKKSPMELISE 60

Query: 61  VPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           VPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKYCGLRY QDHHH
Sbjct: 61  VPPIKVDGRIVACEGDTNPALGHPIEFICLDLNEPAICKYCGLRYVQDHHH 110

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BLAST of MELO3C024729 vs. Swiss-Prot
Match: NDUS6_HUMAN (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Homo sapiens GN=NDUFS6 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-07
Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 1


Query: 39  QDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRY 98
           ++ ++   ++LI E P  +VE R++AC+G    ALGHP  +I LD+E +   C YCGL++
Sbjct: 61  KEVNENFAIDLIAEQPVSEVETRVIACDGGGG-ALGHPKVYINLDKETKTGTCGYCGLQF 120

Query: 99  TQDHH 103
            Q HH
Sbjct: 121 RQHHH 124

[Close]

BLAST of MELO3C024729 vs. Swiss-Prot
Match: NDUS6_PANTR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Pan troglodytes GN=NDUFS6 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-07
Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 1


Query: 39  QDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRY 98
           ++ ++   ++LI E P  +VE R++AC+G    ALGHP  +I LD+E +   C YCGL++
Sbjct: 61  KEVNENFAIDLIAEQPVSEVETRVIACDGGGG-ALGHPKVYINLDKETKTGTCGYCGLQF 120

Query: 99  TQDHH 103
            Q HH
Sbjct: 121 RQHHH 124

[Close]

BLAST of MELO3C024729 vs. Swiss-Prot
Match: NDUS6_PONPY (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Pongo pygmaeus GN=NDUFS6 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-07
Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 1


Query: 39  QDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRY 98
           ++ ++   ++LI E P  +VE R++AC+G    ALGHP  +I LD+E +   C YCGL++
Sbjct: 61  KEVNENFAIDLIAEQPVSEVETRVIACDGGGG-ALGHPKVYINLDKETKTGTCGYCGLQF 120

Query: 99  TQDHH 103
            Q HH
Sbjct: 121 RQHHH 124

[Close]

BLAST of MELO3C024729 vs. Swiss-Prot
Match: NDUS6_MOUSE (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Mus musculus GN=Ndufs6 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 7.1e-07
Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 1


Query: 39  QDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDRE-EPAVCKYCGLRY 98
           ++ ++   ++LI + P  +VE RI+AC+G    ALGHP  +I LD+E +   C YCGL++
Sbjct: 53  KEVNENFAIDLIAQQPVNEVEHRIIACDGGGG-ALGHPKVYINLDKETKTGTCGYCGLQF 112

Query: 99  TQDHH 103
            Q HH
Sbjct: 113 KQHHH 116

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BLAST of MELO3C024729 vs. TrEMBL
Match: A0A0A0LNG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432800 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.5e-51
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFK+LLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKV G
Sbjct: 1   MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ HHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQGHHH 103

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BLAST of MELO3C024729 vs. TrEMBL
Match: V4TXJ2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023015mg PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 3.0e-44
Identity = 87/103 (84.47%), Postives = 95/103 (92.23%), Query Frame = 1


Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSL K L++S SN+PS+TRNL+ VANQI +HTAKWMQD SKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLLKTLIKS-SNLPSTTRNLTAVANQISEHTAKWMQDVSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLD +EPA+CKYCGLRY QDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDLKEPAICKYCGLRYVQDHHH 102

[Close]

BLAST of MELO3C024729 vs. TrEMBL
Match: W9R6Y3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023521 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.8e-41
Identity = 84/103 (81.55%), Postives = 90/103 (87.38%), Query Frame = 1


Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSL K L+ SS  +   TRNLSLV NQ+G HTAKWMQDTS KSPMELINEVPPIKVEG
Sbjct: 1   MASSLMKTLIRSSK-LALGTRNLSLVPNQVGNHTAKWMQDTSMKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGD++PALGHPIEFICLD +EPAVCKYCGLRY QDHHH
Sbjct: 61  RIVACEGDNDPALGHPIEFICLDLKEPAVCKYCGLRYVQDHHH 102

[Close]

BLAST of MELO3C024729 vs. TrEMBL
Match: V7AE46_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G020300g PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.3e-41
Identity = 82/103 (79.61%), Postives = 92/103 (89.32%), Query Frame = 1


Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASS+ + L++ SS+  +STR+ SLVA+QI  HTAKWMQDTSKKSPMELINEVPPIKV+G
Sbjct: 1   MASSVLRNLMKFSSSTNTSTRSFSLVASQISNHTAKWMQDTSKKSPMELINEVPPIKVDG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGD+NPALGHPIEFICLD  EPAVCKYCGLRY QDHHH
Sbjct: 61  RIVACEGDTNPALGHPIEFICLDLAEPAVCKYCGLRYVQDHHH 103

[Close]

BLAST of MELO3C024729 vs. TrEMBL
Match: M5X1E0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012674mg PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.1e-41
Identity = 82/103 (79.61%), Postives = 89/103 (86.41%), Query Frame = 1


Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLF+ L+ SS    + TRN SLV +QI  HTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 56  MASSLFRTLIRSSKLGSAGTRNFSLVRSQISNHTAKWMQDTSKKSPMELINEVPPIKVEG 115

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGD +PALGHPIEFICLD +EPA+CKYCGLRY QDHHH
Sbjct: 116 RIVACEGDIDPALGHPIEFICLDLDEPAICKYCGLRYVQDHHH 158

[Close]

BLAST of MELO3C024729 vs. TAIR10
Match: AT3G03070.1 (AT3G03070.1 NADH-ubiquinone oxidoreductase-related)

HSP 1 Score: 162.2 bits (409), Expect = 1.8e-40
Identity = 78/111 (70.27%), Postives = 85/111 (76.58%), Query Frame = 1


Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQ--------IGQHTAKWMQDTSKKSPMELINE 60
           MAS+L K L+ S   +PSS RN S+   Q        +G HTAKWMQD SKKSPMELI+E
Sbjct: 1   MASNLLKALIRSQI-LPSSRRNFSVATTQLGIPTDDLVGNHTAKWMQDRSKKSPMELISE 60

Query: 61  VPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           VPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKYCGLRY QDHHH
Sbjct: 61  VPPIKVDGRIVACEGDTNPALGHPIEFICLDLNEPAICKYCGLRYVQDHHH 110

[Close]

BLAST of MELO3C024729 vs. NCBI nr
Match: gi|659125629|ref|XP_008462784.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 215.3 bits (547), Expect = 5.0e-53
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of MELO3C024729 vs. NCBI nr
Match: gi|449468271|ref|XP_004151845.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 209.1 bits (531), Expect = 3.6e-51
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFK+LLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKV G
Sbjct: 1   MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ HHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQGHHH 103

[Close]

BLAST of MELO3C024729 vs. NCBI nr
Match: gi|567901454|ref|XP_006443215.1| (hypothetical protein CICLE_v10023015mg [Citrus clementina])

HSP 1 Score: 185.7 bits (470), Expect = 4.2e-44
Identity = 87/103 (84.47%), Postives = 95/103 (92.23%), Query Frame = 1


Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSL K L++S SN+PS+TRNL+ VANQI +HTAKWMQD SKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLLKTLIKS-SNLPSTTRNLTAVANQISEHTAKWMQDVSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLD +EPA+CKYCGLRY QDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDLKEPAICKYCGLRYVQDHHH 102

[Close]

BLAST of MELO3C024729 vs. NCBI nr
Match: gi|658054136|ref|XP_008362822.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 179.1 bits (453), Expect = 4.0e-42
Identity = 83/103 (80.58%), Postives = 90/103 (87.38%), Query Frame = 1


Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLF+ L+ SS    + TRN SLV  QI +HTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFRTLIRSSKLGSAGTRNFSLVRTQISEHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGD+NPALGHPIEFICLD +EPA+CKYCGLRY QDHHH
Sbjct: 61  RIVACEGDTNPALGHPIEFICLDLDEPAICKYCGLRYVQDHHH 103

[Close]

BLAST of MELO3C024729 vs. NCBI nr
Match: gi|703105548|ref|XP_010098275.1| (hypothetical protein L484_023521 [Morus notabilis])

HSP 1 Score: 176.4 bits (446), Expect = 2.6e-41
Identity = 84/103 (81.55%), Postives = 90/103 (87.38%), Query Frame = 1


Query: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSL K L+ SS  +   TRNLSLV NQ+G HTAKWMQDTS KSPMELINEVPPIKVEG
Sbjct: 1   MASSLMKTLIRSSK-LALGTRNLSLVPNQVGNHTAKWMQDTSMKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGD++PALGHPIEFICLD +EPAVCKYCGLRY QDHHH
Sbjct: 61  RIVACEGDNDPALGHPIEFICLDLKEPAVCKYCGLRYVQDHHH 102

The following BLAST results are available for this feature:

BLAST of MELO3C024729 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDUS6_ARATH	3.1e-39	70.27	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidop...	[more]
NDUS6_HUMAN	3.2e-07	41.54	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Homo sap...	[more]
NDUS6_PANTR	3.2e-07	41.54	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Pan trog...	[more]
NDUS6_PONPY	3.2e-07	41.54	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Pongo py...	[more]
NDUS6_MOUSE	7.1e-07	41.54	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Mus musc...	[more]

BLAST of MELO3C024729 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNG2_CUCSA	2.5e-51	97.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432800 PE=4 SV=1	[more]
V4TXJ2_9ROSI	3.0e-44	84.47	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023015mg PE=4 SV=1	[more]
W9R6Y3_9ROSA	1.8e-41	81.55	Uncharacterized protein OS=Morus notabilis GN=L484_023521 PE=4 SV=1	[more]
V7AE46_PHAVU	2.3e-41	79.61	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G020300g PE=4 SV=1	[more]
M5X1E0_PRUPE	3.1e-41	79.61	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012674mg PE=4 SV=1	[more]

BLAST of MELO3C024729 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03070.1	1.8e-40	70.27	NADH-ubiquinone oxidoreductase-related	[more]

BLAST of MELO3C024729 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125629\|ref\|XP_008462784.1\|	5.0e-53	100.00	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|449468271\|ref\|XP_004151845.1\|	3.6e-51	97.09	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|567901454\|ref\|XP_006443215.1\|	4.2e-44	84.47	hypothetical protein CICLE_v10023015mg [Citrus clementina]	[more]
gi\|658054136\|ref\|XP_008362822.1\|	4.0e-42	80.58	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|703105548\|ref\|XP_010098275.1\|	2.6e-41	81.55	hypothetical protein L484_023521 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019401	Znf_CHCC

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0015992	proton transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU50842	melon EST collection version 4.0	transcribed_cluster
MU54921	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024729T1	MELO3C024729T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU54921	MU54921	transcribed_cluster
MU50842	MU50842	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019401	Zinc finger, CHCC-type	GENE3D	G3DSA:2.60.260.40		coord: 49..99 score: 2.9
IPR019401	Zinc finger, CHCC-type	PFAM	PF10276	zf-CHCC	coord: 60..97 score: 4.3
None	No IPR available	PANTHER	PTHR13156	NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNIT	coord: 33..103 score: 1.8
None	No IPR available	PANTHER	PTHR13156:SF0	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 6, MITOCHONDRIAL	coord: 33..103 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C024729	Csa2G432800	Cucumber (Chinese Long) v2	cumeB087
MELO3C024729	Cla006811	Watermelon (97103) v1	mewmB125
MELO3C024729	ClCG02G007680	Watermelon (Charleston Gray)	mewcgB090
MELO3C024729	Cla97C02G034380	Watermelon (97103) v2	mewmbB092
MELO3C024729	Bhi10G001238	Wax gourd	mewgoB126
MELO3C024729	CSPI02G27430	Wild cucumber (PI 183967)	cpimeB096
MELO3C024729	Cucsa.017430	Cucumber (Gy14) v1	cgymeB440
MELO3C024729	CmaCh20G009410	Cucurbita maxima (Rimu)	cmameB493
MELO3C024729	CmoCh20G009520	Cucurbita moschata (Rifu)	cmomeB483
MELO3C024729	Lsi10G002260	Bottle gourd (USVL1VR-Ls)	lsimeB053
MELO3C024729	Cp4.1LG16g01640	Cucurbita pepo (Zucchini)	cpemeB260
MELO3C024729	Cp4.1LG05g11970	Cucurbita pepo (Zucchini)	cpemeB672
MELO3C024729	CsGy2G026860	Cucumber (Gy14) v2	cgybmeB083
MELO3C024729	Carg25473	Silver-seed gourd	carmeB0935
MELO3C024729	CsaV3_2G036030	Cucumber (Chinese Long) v3	cucmeB103

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C024729	Silver-seed gourd	carmeB1022
MELO3C024729	Cucurbita maxima (Rimu)	cmameB534
MELO3C024729	Cucurbita moschata (Rifu)	cmomeB524