Cla97C02G034380 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G034380
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Location	Cla97Chr02 : 8561655 .. 8567640 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGAGTCTGTTCAAAGCGCTTGTTGAATCTTCCTCCAAAATCCCATCTTCGGCTAGAAATCTGAGTCTTGTTAGCAATCAAATCGGCCAGCACACCGCCAAATGGATGCAGGTATACAGTAATTTCTCGCTAATCCCCCCTTTCGAAATTTACTTCTTCTACGTCTGTGTTTGAGTTGATTTCTGCAGATTCTGTATTCTAGCTTACAAGTCGTTGTTCTTTCTAACTTTACCTGATAACTGATTTGGAGCTTGGGTCTGAAGGCTCCCAATTAATGTTGTTGTTATTGTTGTTGTTGTTTTATTAAATCGATTGTTTTTATGTAGAAATTAATTCGTGTTTTTTTAAGAGAAGAGAAAGAAGTTTGTTTTCCAGTGGTATTGATGGAAGCTAAACCTTTTGGTGCTCATCTTTCATCGAAGCAAATATATATAAATTTTACGAACATTTTATTATTCACTAGCTATCGCCCCCTCCCATCCCTGGTTAGACCATGTCTTATCTTCTTCTTGTTCTGTGGGTTTTATATGTACATGAAGTTATCAGAGAACATGTCTTTCAACCTTTAGAAATATTAACTTTTCATTGATATTTGAGAAGTTACAAGCTATCGACTTCCTAAAGAATGTACAAAAGTAGAAAAGAGAACTCCTCCAGGTTGCATTTATGCTGCTTGCAGGCAAAAAGAGAAGAGCTGTCGTGAATAACAAGCTAGTGAATTCCCTTAAACAGATGAAAGGTTCTATGACTGTTGATGTTGATTTATAATGGCTTTCATATCTCTCAATTACTATTATAACTATTTGCAAAAAAAACCATTTTTATTAAGATACACGTCATGGAGAGACAATCCCAGGCAAAAAGGAACTATGACTACCAAAAGAGTTTCTAATTATTAAGAACCAAAACTTAAGGATAATTACAAACTAAATAGTGGGACACTTAGATAGAGGTATTGAAATTAGCCAATCCTCACACTTCCTCACAAGAATCCTTGACTTTTTAAGAATCCTCCAATCTCTTTCAAACCAAAATCAAATATACCCCAAAATAGCTAAATAAGCTGCTTGCCTCAGAATTTCCCCTTTACCACCAATGCAGGCGCAACTACTTTTCGAACCAATCTAACACCAAATTTTGAGATTTATATTTATAGAGATCTTGCCCCGAATTTTTTGCAGAGAGCTTGCTTTCAAGCTTGAACTGGTGTGTTTTGTGTAGGTATGGTTGTATGGGAAAAAGGTTGAAGCTTTCGTTCGGGGTCTGCCCTTTTTCTTAATGAGTTTGCAGCCATTTTTGGAATAGTTTTGGATTGTTTGTTGTTTGAGGTTGAGCACCCATGACACAATGGATGAAGTTGTTCAGGTTGGAAATGGGGTTCTTCGCATTAGTTTATTTGGCTAGAAAGGAACAATAGAAGAATGTTTTGTGCAGTTAAATGGATGGTGGGATGATATTTAGGATTTGATGTATGCTATTTTTTGGGCTCTTAACTCAAATTTAGGAACTGGTTCGTGGTTATCCGTTTTTTTCTTTGTTACCAACAGTTGGAGTTCTTTGTTGTAAATTTTCTTTAACTTCCATTTTGGTTTGGCCTCTCCAGTGAGGGTTAATGTTTTCCTTCATTTCTGTCAATAAAAATTGAGTTTTCTAGTTCAATTTCATGACTGTAGGCCGCCATATTACAAGTGCAAACCTCTGAAATATTAGGAATTTCATGCATTGGTGAAGTAAACTTATTGGATTACACATTAAGATGGTACTTGTTCATTTGAGTTGTTGAAAACTATCACAAGCCTCCTTCTCTAATTCTGGTAAAGTTGTTTTTGAAGCTCTTGCCTATTATTATCCTGGGTCTTGGAGTCATTGTCCTTTCTCTTATGTTAACATGCTTACGGCAGCACTGTCGTGTTTGTATAGAGTGATAGATATTGCTTAATTGGGGTGCCTTGTCAATTTTGTGAGCAACACCCCAGTCGGTATTTCTCAAGAAATTTTCTCAAGCTATCAATTGCGCCACTTTAAGCCTTTGGCTAAGGAATAGTCAATTTTGGCACCTCCAATGCAATTATAGTTCTTCTTGATGCATAGGAGCAGGACTATGCCAAGTAAATATTTAATTGATCCATTTGCTACTTGAACTCCATGTTTACAATGTTAAGATAGTTTCCCAACATCTTAACAATATTCTTAAATACATGGTCTACTTGTTGAATTTAATTGGTTTCATGTCCAGTATTGCAAGGTTGTAACCTCGTGAAATAAACGTTGATGAATATTGAAAGATTGTCCATTATATCATTTCTCGTGTTTTGTCTAATTGTTTAAAGCGTATTCTTCCATCCACCATAAAAATCAACTAGCTTTTGTTGCCAATAGAAAAATGTTGGATGCCTCCTCAATAGCGAATGAACTAATTGATGATTGGACTTTCTCTAGGAGGGAAGGAGTGGTTCTCAAACTAGACCTAGGATAGGCTTTTGATATTGTTGATTAGGGCTTTTGGATGCCCTTCTTCAGGCTAAGGGCTTTGGTACTCTCTAGCAGTCTTGGGTAAAAGGTTGTATAGCTAGTGCCAACCAAGGTTTGAAATATTGATGTTGGTGGAAATATCAAGGTCCCGATTTTATAGAAATATCAATGGAAATTTCAAGAAACTCTATGAAAATTGATGAAAATTGTTATAATTAGTTAATGAAGCTCTCATTGTGGCTTATTTAGACTGTAATTGACCATTTTTAATCATCACTTCTATAAAATAAGACAACATTTAGATTTATTGTAGATGTATGTGTAGTTGTCGATGCGAGAGCAGAAATGGAAAAATAATTACAAAATAATATAAATTTTAGGAATATTTAATGATGTGAAAATTTAATGAAAAAGTTGAATGAGGTTAAAAATAAAAATAGTGTTTTTTCCAAATTCAATTTCTTTAAAAATGAAAGTTTTGAATTGAAATTAAACTGAAAATTGAGAAAAGTTGGAAATTAGAAAAAGTAACCATTGAAAAAGTTTCATCCTTCATTAGAAATGACAGTGGCTTGTAAAACTATACAATTGTGAGTAATCAAGACTATAAAACTGAAAAATTTGAACTGAGCTAACGTAGTTAATTTAAAAAGAGATCAATATTTTCTCGAAATTTTGAAATTTTTTCAAAATTTTGTCAAAATGGGGGAAAAAGAAAATAAAATAATTCTTGGAATTTCTTTGAAATGGGGAAAAACAAAATTTCCCCCTCCCAAAATTTCAAGGCATCAATGGAAATTTTCCACCGTGGTGCCAACACCTCTATCATTATAAATGGTAGGCCTCCAGGGAAGATCTATCCATCTCCTGAAATTAGACAAGGTGACCCCTCTCAGCTTTCTTATTTATTTTGGTTTATGATTGCTTTAGTCACCTTTTGGACCATAGTGCCCATTTGGATACTATTGGGAGGGGACCCTTCCGATTGGTACATCCTCTTTCTATTTGAACTACTTTACAATTTGTTTATGACACCCTTTTGTTTTCGACTGTGGATGGGATTGTTTTAGTACGTCTTTTTGAGATTGTTAATATTTTTGAGAGGGCATTTGGTTTGAAAATCAATCTAGGAGTGCATTGCTTGGGTTTCATATTGCTGACTCTAAGATGAAACGGATGTTGTCTACGTTTGAATGCAAATAGGGTCACTAGCCATTGACCTATCTAGGTCTTCCCTTGGGAGGTAATTCTAAAATTGTTACATTGAGGGCATTCAACACAAGCTTCATAATTGAATGTATGCTTTTATCACAAAGGGTGGTAGACATACACTTATCCAGTCTACTCTGGTTAGTGTGCCAACTTATTATTTATGTTTGCTTCGTGGTCCAACTAAAACTACAATAATATTGGATAGTTGATTCGAGATTTTTTCTGGGAAGGTTCTTGTGGTGATGGCCGTATGGATAATGTGAATTGGGAGACTATTCAACTCCCTAAATTGATGGGTGGTCTTGACATTGGTAATTTTCAGCATCGTGATTATGATTTTGTAGATTATTGACCCGGTTGCTATTTTATTTATTTTTGGATGAAGATCTGGTTGCTAGTTGTGCTGGCATTGTCTTGGTAATGGCCAATGGGATCTCTCTACTTTCTGGAAGACCTCATAGCTTAGTTGTGGTTCAATTATGGTTGTTTTCCCTCCACGTTTTTGCCTTGCTCTCTATCCTGATGCTGTGGTGGCTGATGTGTGGGTTTAGGTAACTGGTGTTTGGGATGTGCATCTTTGCCCCAAACTTAATGATTTAGAAATGATTGAATGGCCTAATCTTTCTCATCTTTTGTCCTCAGTCCACCTTCAGAACTCTCCTGATTCATGGACTTGGCCTCTTGCACCATCTATGAGATACTTTGTTAAATCACTTATAGCATATCTTACCTGATTTCAAATTGGATACCGTGTGCCTTATGAATCTCCAGGAAATCATGAGCGAGACACTCAGATTTTTTACTGACCTAGGGTTTCTATTGAATGTTCTTTCCAACCCAACATTTCATTGCCTTGCAGTGGCTATGCCACTGTTCTAAGCATTTGTATTTCAAAGGAAACAATTATCTTAACAGTTGTCTAATCTGTTACACGGTTGCAGCATGGAGCATTCTTATGCACTTGAAGCTTAAATCAACCCTTCTAGTGTTAATCCAAAAAAAAATCAACCCTTCTAGTGTGCTTGGTTGGAAGAGTAGGGGCCTAGTAAACAGGTCAAAGAGAATGTCATTAGCAGAGGATTTTTATCACTCTAGTGATGGATCCGATCAGCCCTTGGTTGAAATATGAGACTAGAGGACTCTTTGTTGCAAAATATATTACATCCATGTCCATTAAATAGGATTGAGTCAGTCTAACGATGGAGGTTTTTCCTATCTTGTAACAGGTACAACTTCGTAGATTTATTAAATCATTCTAGATAACCTAGACTTCCTTCGAATGCTCTAGAGTATATGAGAACTATCCAAGGTTTTTTATTATTTTAAATCTAGGATTCTATCCCACTGCAGATCAATTCTTCACAACCCTCGTGCATTTTTCACATTTTCAAGAAGTTGTGAGTTGTGAAATTAGGGTCCCTTCCATGTTTTGACAATTAAAAGAATTGTGATTGCTTGGAGTCTTCAATTAGGTTATTTATCAAGTTTGTTATTTCATGAACTTCTTACTGATGTGTAGTTCACAACTAATTATTTTGGAACTGAGGTGGACCTTCGGTATTATAAACAATGATAACTTGTAACAAAGCACTGTTTTAGCCCAATATTCTTTTTACCTTGCCTGTCATCTCCCACATTTTCAAGTAAAATCTCTCTACTTCATTTTACTTATGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTTGATTACTGTTTCTCTATTGATAATTGTGATACATTGTTTCTCATGTTTGAATCTTGAATTTTCTTTGGCATGACCTCAAAATATTTTGCTTTTTGCCATCTATATCCTTGAATTATTGAGTCAATCAAGTTCCACGGACTATTGAGACATGATATAGTTCTTTCTCTATTTGTTTCGTTTACTTCTAAGAAATATCCTACCATTTTCTGGAACTCGATATTATTCTTTGCGATCCTGTCCAATACTGAAGGATATATGAAAGTTTTATTTTATTTCCATTCCTAGGATACAAGTAAGAAATCACCGATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTCGAAGGCCGTATCGTTGCTTGTGAGGGAGGTTAGTACATCTCCATACATGTATCCATACATTTCCAAGTAAACAATTTATTAAGGAAGGTGTGGTTCCTTATTTGCATTCAAACTCTTGCTGACTGCAGACAGCAATCCTGCCCTTGGACATCCAATCGAGTTCATATGCCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGGTATACTCAGGACCATCATCACTAG

mRNA sequence

ATGGCGTCGAGTCTGTTCAAAGCGCTTGTTGAATCTTCCTCCAAAATCCCATCTTCGGCTAGAAATCTGAGTCTTGTTAGCAATCAAATCGGCCAGCACACCGCCAAATGGATGCAGGATACAAGTAAGAAATCACCGATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTCGAAGGCCGTATCGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTTGGACATCCAATCGAGTTCATATGCCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGGTATACTCAGGACCATCATCACTAG

Coding sequence (CDS)

ATGGCGTCGAGTCTGTTCAAAGCGCTTGTTGAATCTTCCTCCAAAATCCCATCTTCGGCTAGAAATCTGAGTCTTGTTAGCAATCAAATCGGCCAGCACACCGCCAAATGGATGCAGGATACAAGTAAGAAATCACCGATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTCGAAGGCCGTATCGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTTGGACATCCAATCGAGTTCATATGCCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGGTATACTCAGGACCATCATCACTAG

Protein sequence

MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH

Homology

[Close]

BLAST of Cla97C02G034380 vs. NCBI nr
Match: XP_023511819.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.5 bits (537), Expect = 1.4e-51
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFKALVESSSKIPSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Cla97C02G034380 vs. NCBI nr
Match: XP_022943963.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata])

HSP 1 Score: 209.9 bits (533), Expect = 4.1e-51
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFKALVESSSKIPSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKALVESSSKIPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPGLGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Cla97C02G034380 vs. NCBI nr
Match: XP_022986645.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita maxima])

HSP 1 Score: 209.5 bits (532), Expect = 5.3e-51
Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFKALVESSSK PSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKALVESSSKTPSSARSLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Cla97C02G034380 vs. NCBI nr
Match: XP_022148513.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Momordica charantia])

HSP 1 Score: 207.6 bits (527), Expect = 2.0e-50
Identity = 97/103 (94.17%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MAS+LFK ++ESSSK PSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASTLFKTIIESSSKFPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIIACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Cla97C02G034380 vs. NCBI nr
Match: XP_008462784.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucumis melo])

HSP 1 Score: 205.7 bits (522), Expect = 7.6e-50
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFK L+ESSS IPSS RNLSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Cla97C02G034380 vs. TrEMBL
Match: tr|A0A1S3CI88|A0A1S3CI88_CUCME (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501074 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.1e-50
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFK L+ESSS IPSS RNLSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKLLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 103

[Close]

BLAST of Cla97C02G034380 vs. TrEMBL
Match: tr|A0A0A0LNG2|A0A0A0LNG2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432800 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-48
Identity = 96/103 (93.20%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFK L+ESSS IPSS RNLSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV G
Sbjct: 1   MASSLFKVLLESSSNIPSSTRNLSLVANQIGQHTAKWMQDTSKKSPMELINEVPPIKVAG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ HHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQGHHH 103

[Close]

BLAST of Cla97C02G034380 vs. TrEMBL
Match: tr|V4TXJ2|V4TXJ2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10023015mg PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.3e-42
Identity = 84/103 (81.55%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 1   MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSL K L++SS+ +PS+ RNL+ V+NQI +HTAKWMQD SKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLLKTLIKSSN-LPSTTRNLTAVANQISEHTAKWMQDVSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLD +EPA+CKYCGLRY QDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDLKEPAICKYCGLRYVQDHHH 102

[Close]

BLAST of Cla97C02G034380 vs. TrEMBL
Match: tr|A0A2H5QC55|A0A2H5QC55_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_216030 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.3e-42
Identity = 84/103 (81.55%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 1   MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSL K L++SS+ +PS+ RNL+ V+NQI +HTAKWMQD SKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLLKTLIKSSN-LPSTTRNLTAVANQISEHTAKWMQDVSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLD +EPA+CKYCGLRY QDHHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDLKEPAICKYCGLRYVQDHHH 102

[Close]

BLAST of Cla97C02G034380 vs. TrEMBL
Match: tr|A0A2P4ID54|A0A2P4ID54_QUESU (Nadh dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_29293 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.0e-42
Identity = 84/103 (81.55%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 1   MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEG 60
           MASSLFK L+ SS+  PS+ R+ SL+S+QI +HTAKWMQDTSKKSPMELINEVPPIKVEG
Sbjct: 1   MASSLFKTLIRSSNS-PSTVRSFSLISSQISEHTAKWMQDTSKKSPMELINEVPPIKVEG 60

Query: 61  RIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           RIVACEGDSNPALGHPIEFICLD  EPA+CKYCGLRY Q+HHH
Sbjct: 61  RIVACEGDSNPALGHPIEFICLDLNEPAICKYCGLRYVQEHHH 102

[Close]

BLAST of Cla97C02G034380 vs. Swiss-Prot
Match: sp|Q9M9M6|NDUS6_ARATH (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g03070 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-39
Identity = 79/111 (71.17%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 1   MASSLFKALVESSSKIPSSARNLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINE 60
           MAS+L KAL+ S   +PSS RN S+ + Q        +G HTAKWMQD SKKSPMELI+E
Sbjct: 1   MASNLLKALIRSQI-LPSSRRNFSVATTQLGIPTDDLVGNHTAKWMQDRSKKSPMELISE 60

Query: 61  VPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           VPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKYCGLRY QDHHH
Sbjct: 61  VPPIKVDGRIVACEGDTNPALGHPIEFICLDLNEPAICKYCGLRYVQDHHH 110

[Close]

BLAST of Cla97C02G034380 vs. TAIR10
Match: AT3G03070.1 (NADH-ubiquinone oxidoreductase-related)

HSP 1 Score: 163.7 bits (413), Expect = 6.0e-41
Identity = 79/111 (71.17%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 1   MASSLFKALVESSSKIPSSARNLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINE 60
           MAS+L KAL+ S   +PSS RN S+ + Q        +G HTAKWMQD SKKSPMELI+E
Sbjct: 1   MASNLLKALIRSQI-LPSSRRNFSVATTQLGIPTDDLVGNHTAKWMQDRSKKSPMELISE 60

Query: 61  VPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH 104
           VPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKYCGLRY QDHHH
Sbjct: 61  VPPIKVDGRIVACEGDTNPALGHPIEFICLDLNEPAICKYCGLRYVQDHHH 110

The following BLAST results are available for this feature:

BLAST of Cla97C02G034380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023511819.1	1.4e-51	99.03	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucur...	[more]
XP_022943963.1	4.1e-51	98.06	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita ...	[more]
XP_022986645.1	5.3e-51	98.06	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita ...	[more]
XP_022148513.1	2.0e-50	94.17	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Momordica ...	[more]
XP_008462784.1	7.6e-50	95.15	PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial ...	[more]

BLAST of Cla97C02G034380 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CI88\|A0A1S3CI88_CUCME	5.1e-50	95.15	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Cucumis ...	[more]
tr\|A0A0A0LNG2\|A0A0A0LNG2_CUCSA	1.2e-48	93.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432800 PE=4 SV=1	[more]
tr\|V4TXJ2\|V4TXJ2_9ROSI	2.3e-42	81.55	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10023015mg PE=4 ...	[more]
tr\|A0A2H5QC55\|A0A2H5QC55_CITUN	2.3e-42	81.55	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_216030 PE=4 SV=1	[more]
tr\|A0A2P4ID54\|A0A2P4ID54_QUESU	3.0e-42	81.55	Nadh dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Quercus ...	[more]

BLAST of Cla97C02G034380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M9M6\|NDUS6_ARATH	1.1e-39	71.17	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidop...	[more]

BLAST of Cla97C02G034380 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03070.1	6.0e-41	71.17	NADH-ubiquinone oxidoreductase-related	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019401	Znf_CHCC

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0015992	proton transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G034380.1	Cla97C02G034380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.60.260.40		coord: 55..103 e-value: 6.4E-17 score: 62.9
None	No IPR available	PANTHER	PTHR13156	NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNIT	coord: 35..103
IPR019401	Zinc finger, CHCC-type	PFAM	PF10276	zf-CHCC	coord: 60..97 e-value: 4.3E-15 score: 55.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C02G034380	Cla006810	Watermelon (97103) v1	wmwmbB326
Cla97C02G034380	Csa2G432800	Cucumber (Chinese Long) v2	cuwmbB119
Cla97C02G034380	MELO3C024729	Melon (DHL92) v3.5.1	mewmbB092
Cla97C02G034380	ClCG02G007680	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G034380	CSPI02G27430	Wild cucumber (PI 183967)	cpiwmbB121
Cla97C02G034380	Cucsa.017430	Cucumber (Gy14) v1	cgywmbB459
Cla97C02G034380	CmaCh20G009410	Cucurbita maxima (Rimu)	cmawmbB571
Cla97C02G034380	CmoCh20G009520	Cucurbita moschata (Rifu)	cmowmbB547
Cla97C02G034380	Lsi10G002260	Bottle gourd (USVL1VR-Ls)	lsiwmbB054
Cla97C02G034380	CsGy2G026860	Cucumber (Gy14) v2	cgybwmbB116
Cla97C02G034380	MELO3C024729.2	Melon (DHL92) v3.6.1	medwmbB087
Cla97C02G034380	Carg25473	Silver-seed gourd	carwmbB1004
Cla97C02G034380	CsaV3_2G036030	Cucumber (Chinese Long) v3	cucwmbB125
Cla97C02G034380	Bhi10G001238	Wax gourd	wgowmbB370

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G034380	Silver-seed gourd	carwmbB1111
Cla97C02G034380	Cucurbita maxima (Rimu)	cmawmbB617
Cla97C02G034380	Cucurbita moschata (Rifu)	cmowmbB591