MELO3C023245.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C023245.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionCoiled-coil domain-containing protein 18, putative isoform 2
Locationchr11 : 502137 .. 503321 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGGCATGGCAGCCGGCGATTGGTCCGGTCACGGAAGCTGAAAGCAAGAACCCGATGAAGACAAGAGATTTGGAGGTGACGGTGACACGCACGATGAGAAGCCCACGTGGTTGGAGATCCCCGTCCTTCTCTTGCCACGTGTACACCAATCTAAATGGTTGACAGTCTCCACGTGGCGGAGTTAATTCGCCCATGGATCGGTGCCACATGCCAAGCTGTCAACTCTCCTCCCTCTTCCACTATATATACACATCATACAACCAAAGAGGAACATTTCATTCTCTTTCTCTTTCAAAAGTGAAAAACAGTTGGAAGCCATTTTCCCATCCTTCTTCCTTTCTAGAGCTGTGTTGTTAAAAGAAGATTGAAGAAAAGCTTAGAAAAAGGAGTAATATATTCATTATGGGAAGTATTGATAGAAAATCATCCATTGAAAATGAGCCAAGAACTCTCAAAATGAATCAAATCCAATTTGCAAGAGTAAGTCTCTCTCTCTCTCTTTCTCTTTTTAAAAAAATTTATTTTTCACTATTCTATATTTTTTGCTTTAATTTTTAGATTTAGTGATTGAATTTGGTGTTGTATATAGCTCATCATAATCATGATCAATTTGGATTAATATATATATATTTCAGGAAGCAGCACTTTATGTGTTAAACACAACAACAATAGAAGAAGCAATGAAGATTTTCACAGAGGTACGTAATTATTATTAAATTAGACACAAATATATATATACAAATTCTTTTTGGTAATTACCAATTTAATTACCCTATTATGATTGAGGTGTGAATAAATGGTGGAAAATAATTCTTGATGCAGGGATTAAAACCAGTGGAATGTAAAGCAATTATTGATGAAGATAAAGATTCAATAATGAAAAATTGGTACCATGATGAAGAAATTGATGAGTTACAACCTTTTTGTCAACTTAGAGATATTGTCTCTGCCCCTTTTTAGTTTTTTTTTTCCTTCTTTTTTTTTTCTTTTGATAAATACACACATGTAAAGGTTTCTGTCTTAATTCTTTTAGTGGAAAGGAGCAAGTTTTAATTTCCATCTATCCTTTCTTAAAAAAAAGAAAAAAAGAAAAAAGAAAAACAATGGTTTAGTAGTAATGTAAATAAGGAGCTTTCAAATGTTGTTATTGGTAGAAATTTTATAAAAAAAGAATATTTAAATCAA

mRNA sequence

TCGGCATGGCAGCCGGCGATTGGTCCGGTCACGGAAGCTGAAAGCAAGAACCCGATGAAGACAAGAGATTTGGAGGTGACGGTGACACGCACGATGAGAAGCCCACGTGGTTGGAGATCCCCGTCCTTCTCTTGCCACGTGTACACCAATCTAAATGGTTGACAGTCTCCACGTGGCGGAGTTAATTCGCCCATGGATCGGTGCCACATGCCAAGCTGTCAACTCTCCTCCCTCTTCCACTATATATACACATCATACAACCAAAGAGGAACATTTCATTCTCTTTCTCTTTCAAAAGTGAAAAACAGTTGGAAGCCATTTTCCCATCCTTCTTCCTTTCTAGAGCTGTGTTGTTAAAAGAAGATTGAAGAAAAGCTTAGAAAAAGGAGTAATATATTCATTATGGGAAGTATTGATAGAAAATCATCCATTGAAAATGAGCCAAGAACTCTCAAAATGAATCAAATCCAATTTGCAAGAGAAGCAGCACTTTATGTGTTAAACACAACAACAATAGAAGAAGCAATGAAGATTTTCACAGAGGGATTAAAACCAGTGGAATGTAAAGCAATTATTGATGAAGATAAAGATTCAATAATGAAAAATTGGTACCATGATGAAGAAATTGATGAGTTACAACCTTTTTGTCAACTTAGAGATATTGTCTCTGCCCCTTTTTAGTTTTTTTTTTCCTTCTTTTTTTTTTCTTTTGATAAATACACACATGTAAAGGTTTCTGTCTTAATTCTTTTAGTGGAAAGGAGCAAGTTTTAATTTCCATCTATCCTTTCTTAAAAAAAAGAAAAAAAGAAAAAAGAAAAACAATGGTTTAGTAGTAATGTAAATAAGGAGCTTTCAAATGTTGTTATTGGTAGAAATTTTATAAAAAAAGAATATTTAAATCAA

Coding sequence (CDS)

ATGGGAAGTATTGATAGAAAATCATCCATTGAAAATGAGCCAAGAACTCTCAAAATGAATCAAATCCAATTTGCAAGAGAAGCAGCACTTTATGTGTTAAACACAACAACAATAGAAGAAGCAATGAAGATTTTCACAGAGGGATTAAAACCAGTGGAATGTAAAGCAATTATTGATGAAGATAAAGATTCAATAATGAAAAATTGGTACCATGATGAAGAAATTGATGAGTTACAACCTTTTTGTCAACTTAGAGATATTGTCTCTGCCCCTTTTTAG

Protein sequence

MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDEDKDSIMKNWYHDEEIDELQPFCQLRDIVSAPF
BLAST of MELO3C023245.2 vs. NCBI nr
Match: XP_008460897.1 (PREDICTED: uncharacterized protein LOC103499638 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-44
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE 60
          MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE
Sbjct: 1  MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE 60

Query: 61 DKDSIMKNWYHDEEIDELQPFCQLRDIVSAPF 93
          DKDSIMKNWYHDEEIDELQPFCQLRDIVSAPF
Sbjct: 61 DKDSIMKNWYHDEEIDELQPFCQLRDIVSAPF 92

BLAST of MELO3C023245.2 vs. NCBI nr
Match: XP_011649401.1 (PREDICTED: uncharacterized protein LOC105434623 [Cucumis sativus] >KGN62156.1 hypothetical protein Csa_2G302230 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 3.9e-37
Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE 60
          MGSIDRKSSIENEPRTLKM+QIQFAREAALYV+NT TIEEAMKIFTEGL+PVECKAI+ E
Sbjct: 1  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVMNTATIEEAMKIFTEGLQPVECKAIM-E 60

Query: 61 DKDSIMKNWYHDEEIDE-LQPFCQLRDIVSAPF 93
          DKDSI+KNWYHDEEIDE LQPF QLRDIVSAPF
Sbjct: 61 DKDSIVKNWYHDEEIDESLQPFYQLRDIVSAPF 92

BLAST of MELO3C023245.2 vs. NCBI nr
Match: XP_023512402.1 (uncharacterized protein LOC111777167 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144.4 bits (363), Expect = 1.9e-31
Identity = 71/92 (77.17%), Postives = 83/92 (90.22%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE 60
          MG +DRKSSIE EPRTLKMNQIQFAREAALYV+NTT++EEA+KIFTEGL+ VECKAI DE
Sbjct: 1  MGRMDRKSSIETEPRTLKMNQIQFAREAALYVMNTTSMEEAIKIFTEGLEAVECKAIRDE 60

Query: 61 DKDSIMKNWYHDEEIDELQPFCQLRDIVSAPF 93
          D +SIM+NW+H++E DEL P  QLRDIV+APF
Sbjct: 61 D-ESIMENWFHEQEADELPPLYQLRDIVTAPF 91

BLAST of MELO3C023245.2 vs. NCBI nr
Match: XP_022947894.1 (uncharacterized protein LOC111451648 [Cucurbita moschata])

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-27
Identity = 68/92 (73.91%), Postives = 79/92 (85.87%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE 60
          M  IDRKSSIENEPRTLKM+QIQFAREAALYV+NT++IEEAM+IFTEGL+ VECK I  E
Sbjct: 1  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKPI--E 60

Query: 61 DKDSIMKNWYHDEEIDELQPFCQLRDIVSAPF 93
          D+DS M+N  H+EE+DEL  F +L DIVSAPF
Sbjct: 61 DRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF 90

BLAST of MELO3C023245.2 vs. NCBI nr
Match: XP_022150869.1 (uncharacterized protein LOC111018915 [Momordica charantia])

HSP 1 Score: 130.2 bits (326), Expect = 3.6e-27
Identity = 64/92 (69.57%), Postives = 77/92 (83.70%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE 60
          MG IDRKSSIENEPRTLKM+QIQFAREAALY+LNTTTI+EAM+IFTEGL+ VECKA  D 
Sbjct: 6  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLETVECKATRDR 65

Query: 61 DKDSIMKNWYHDEEIDELQPFCQLRDIVSAPF 93
          + +   K  Y++EE+ +L+P  + RDIVSAPF
Sbjct: 66 NINGRKKQVYYEEELSDLEPLYRFRDIVSAPF 97

BLAST of MELO3C023245.2 vs. TAIR10
Match: AT4G33467.1 (unknown protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.4e-09
Identity = 41/98 (41.84%), Postives = 55/98 (56.12%), Query Frame = 0

Query: 1   MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFT-----EGLKPVECK 60
           M  ++R+SSIE EP TL ++Q++ ARE ALYV+ T T+EEAM IFT     EGL+  E +
Sbjct: 7   MDMLERRSSIETEPMTLHLDQLENAREEALYVMKTKTMEEAMDIFTKQETHEGLRASEER 66

Query: 61  -AIIDEDKDSIMKNWYHDEEIDELQPFCQLRDIVSAPF 93
                  KD        DE +  + P     DI +APF
Sbjct: 67  GGRCINLKDEXXXXXXXDERMMFMSPHAW--DIHTAPF 102

BLAST of MELO3C023245.2 vs. TrEMBL
Match: tr|A0A1S3CDH2|A0A1S3CDH2_CUCME (uncharacterized protein LOC103499638 OS=Cucumis melo OX=3656 GN=LOC103499638 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 9.7e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE 60
          MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE
Sbjct: 1  MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE 60

Query: 61 DKDSIMKNWYHDEEIDELQPFCQLRDIVSAPF 93
          DKDSIMKNWYHDEEIDELQPFCQLRDIVSAPF
Sbjct: 61 DKDSIMKNWYHDEEIDELQPFCQLRDIVSAPF 92

BLAST of MELO3C023245.2 vs. TrEMBL
Match: tr|A0A0A0LQ89|A0A0A0LQ89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302230 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.6e-37
Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE 60
          MGSIDRKSSIENEPRTLKM+QIQFAREAALYV+NT TIEEAMKIFTEGL+PVECKAI+ E
Sbjct: 1  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVMNTATIEEAMKIFTEGLQPVECKAIM-E 60

Query: 61 DKDSIMKNWYHDEEIDE-LQPFCQLRDIVSAPF 93
          DKDSI+KNWYHDEEIDE LQPF QLRDIVSAPF
Sbjct: 61 DKDSIVKNWYHDEEIDESLQPFYQLRDIVSAPF 92

BLAST of MELO3C023245.2 vs. TrEMBL
Match: tr|A0A061DJK4|A0A061DJK4_THECC (Coiled-coil domain-containing protein 18, putative isoform 2 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_001473 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.5e-16
Identity = 50/89 (56.18%), Postives = 63/89 (70.79%), Query Frame = 0

Query: 4   IDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDEDKD 63
           IDRKSSIE+EPRTL +N+IQ AREAA+YV+ T TIEEAM IFTEGL+PV     +  D  
Sbjct: 45  IDRKSSIESEPRTLNINEIQCAREAAMYVVRTRTIEEAMSIFTEGLEPV---VSVARDNI 104

Query: 64  SIMKNWYHDEEIDELQPFCQLRDIVSAPF 93
             M N    + ++EL    ++RD+VSAPF
Sbjct: 105 GTMMNPKDMQYLEELLHLQEIRDVVSAPF 130

BLAST of MELO3C023245.2 vs. TrEMBL
Match: tr|A0A1R3GDT9|A0A1R3GDT9_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_35729 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.8e-15
Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 0

Query: 3   SIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDEDK 62
           +IDRKSSIE+EPRTL  +QIQ AREAA+YV++T +IEEAM IFTEGL+PV   A  D   
Sbjct: 12  NIDRKSSIESEPRTLSFHQIQCAREAAMYVVSTRSIEEAMSIFTEGLEPVVSGARADNIG 71

Query: 63  DSIMKNWYHDE--EIDELQPFCQLRDIVSAPF 93
            + M +    +  E++E Q   + RD+VSAPF
Sbjct: 72  TNTMMDSKEMQFLELEEFQQLHEFRDVVSAPF 103

BLAST of MELO3C023245.2 vs. TrEMBL
Match: tr|M1CSN4|M1CSN4_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.2e-15
Identity = 51/95 (53.68%), Postives = 68/95 (71.58%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE 60
          M  ++R SSIENEPRTL +NQIQFAR+AALYV+NT  +EEAM+IFTEGL+PV  + + D+
Sbjct: 6  MVPLNRTSSIENEPRTLNLNQIQFARDAALYVINTRGLEEAMRIFTEGLEPVS-QCVHDK 65

Query: 61 DKDSIMKNWYHDEEIDELQPF---CQLRDIVSAPF 93
          ++D +M+  Y DE      P     + RDI +APF
Sbjct: 66 EEDVMME--YADELESLSNPLRINPETRDIATAPF 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008460897.11.5e-44100.00PREDICTED: uncharacterized protein LOC103499638 [Cucumis melo][more]
XP_011649401.13.9e-3790.32PREDICTED: uncharacterized protein LOC105434623 [Cucumis sativus] >KGN62156.1 hy... [more]
XP_023512402.11.9e-3177.17uncharacterized protein LOC111777167 [Cucurbita pepo subsp. pepo][more]
XP_022947894.11.6e-2773.91uncharacterized protein LOC111451648 [Cucurbita moschata][more]
XP_022150869.13.6e-2769.57uncharacterized protein LOC111018915 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT4G33467.11.4e-0941.84unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3CDH2|A0A1S3CDH2_CUCME9.7e-45100.00uncharacterized protein LOC103499638 OS=Cucumis melo OX=3656 GN=LOC103499638 PE=... [more]
tr|A0A0A0LQ89|A0A0A0LQ89_CUCSA2.6e-3790.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302230 PE=4 SV=1[more]
tr|A0A061DJK4|A0A061DJK4_THECC9.5e-1656.18Coiled-coil domain-containing protein 18, putative isoform 2 (Fragment) OS=Theob... [more]
tr|A0A1R3GDT9|A0A1R3GDT9_9ROSI2.8e-1554.35Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_35729 PE=4 SV=1[more]
tr|M1CSN4|M1CSN4_SOLTU6.2e-1553.68Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023245.2.1MELO3C023245.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34808FAMILY NOT NAMEDcoord: 4..92
NoneNo IPR availablePANTHERPTHR34808:SF2SUBFAMILY NOT NAMEDcoord: 4..92