MELO3C023180.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCCAAAATTTCGACTTCTCTCAAACCAGCTTCACCTTCTTCCCTCTCATTTTTCATCTCCGCTCCTCACAGATCGCCGCTCCCCACCAATCCACCGCCATTTTTTTGGAATACTCCATTCAAGCCCACTGGAATCTCGCGGTATGTATCAATTTCCATCTTCCTTTTCTCCATTTCTCCATTTCTCCATTTCTTTCCTTTTTCTTTGGACAGTGTTTATATGAAATGTAGTTTTTGGCTTTAACTGAAAGATTCTTTGTTCTTGTTACTGTAGATTTAGATTAGGGCTTCTCTTGCTTTCTTCTTCTTTGAAATGTTTGTTTTCTTGCTTCTTCCTTTTGAAGTTCCATAATGTCGGAAGCAAGGGATAGATTGGAGAGACAAGTGGATTATGCCGAGGTATTTGCTCGTCGGAGGTCGGAAGGTATATTGGACGAGCAAGAAATGGGTTCTAATTTGATAGGTACTCCGATTGCACGCGCCACTACGACGACTGCTGCTCAACAAAGGCCTACGAATCCCGGCCCTGGTGGAGGTGGTGCGAATCTGAGACGTACTTTTGGTTCTCCCATTTCTGGCGGAATTGGGCGTAATAGATTTCTTTATAGAACTCCAGTGTTGAGCCGTGAGAATCCGTCGGCTGGGAGTTCCAGGCGGAGTAGATCTCGGGGTAGGAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTTCGTGACATAACTGCAGTTGTGAGGGTAAATGACTAATTCCTCTCTTACTTTCATATGGTTCTGCTTAATTTTTCAAGGATTTGTTCTGTTCTGCCTACAATATTGTGGATTACTTGGATATTTGATTCATATTGTTTATAGCAAACCTATTCTCATTGTCATTGCATATGGTATATACGCCAATTCCTACCCAGTAGATATTTGTTCTCCGATACAGTATCTTTGTTTGGATTGATTCTTATTTTAATTTACTTGATCTTCGGAGAACCCCCTATTTTGATTTTCTGGTGTAGTTGTTGTGATTCTTTTTTCTGTTTTTCAGTTGGTAAGCATTTGTTTTGATTTGATTTTTGACCCAAAATGTTGTTGCTTATGTCTAATATTTTTTTTTTTTTGTGAATCCTTAGATTGGATCACTTTCCTTTTTCTTTAAGTAAATTAATCAATAAATTTGTAGTGTTTTTAAGCTATGTACTACCTACCTGTTTGTCTGAAAAGGAGATTCTTTTGGTTTTGTAACATCCATGCCCAATGATTTCATATGAAACATCAACAGTCTGGATAATGAGAACCTGTCCACCATTAACTAAAGTTAACGTTATTCGTTTCCTTTTTTAGATTTTATATTCATTGTTTAGTTGGATTCCAATCCGTTTTTAGGCTTCATTTTCACCTGTTATTAGAACTACTTTTTGGTGGGCTCAATATGCTTCGGCTGGTTACTAGGATGCGCTGACTAGGTAGTCCAAATCAACATTTTGGGCGTTTGTCAAGCTGTGATTTGAAAGTCAATTAACATCTTGTTATCGTGACCTGTGGGGCATGTGTGCTGATTAAGCTTGTGTTGACACTTGTAAATTATCTGACCTGACGTTTCCAATGTATTAAATTAATTAATTTGTTTTGTTTGAAAAGTTTCAACGGACGAAAAAAGTATGTTTTGAGCAAGAAATATCAAATTTAATTTTTCAAGCATCTAGATGACCTTAAATTTGTTAAGACTACAGAATTCTATTTTAAGTTACTTAATTTAAGGCATCATGCATCACTCTTTCTAAGTAATACACTAAATCAAACCATTATGAGGAAAATCTTTGTGATGTATAAAAATAGAAATTTGATTTTCAAAAATGTATAAAGTAAATGTGTCGTTTTTTTTGGTGCCCTCGGTTTTTAGCATATATTATATCACGTTATAATGCATCGTGTCTTCCCTATGTCACATGTCTGTGTCTTTGTATCATTCATCTAAAATCTTTGGTACTTTTTAGGTTGATTCGCTGATAATTTTGCTGTCTATGTGAAACATTCCTCTCATCTTTTCACGTCTCTGAGGATTTCATTTGGGAATTGTCTTTTAGAAATTTCTTTGAACTATGTTCTTTCACTAATCAAAGGGAATTCTCTTTAAAGCATTGCATCTGGGCTCCTGCATATGGGCATTTGGATATTTAGTTACTGCTCCATTTCATTCAATATCACCTGTGTTTTTCCTAGAAATCTCCTTCCCTAGTTTTTCAATTGAGGCATTTGGAAGGTCATATGGTTAATTTCTAAGGAATCCTATTCCTTTAATCAGGCAATCGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAGTAGTCCAGCTCCCTCGGACGAAAGAGCATTAGAGTATAGCGTCTCCGTGGCAAGTGATCATCAAGAGCCGATCATTTCTCTGCTTACCCCAAAACCAACCGTAGGAAAAGTTCCAAAGATTCTTCGTGGAATCGCAAATGAGAACACGGTAGGGGCCGAGACTCTGACTCCTCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAGTTACAGAAATTGAAAAGAACACCAAGTGCCAAGAAAGCAGAGAGGGAGAAAAGGGTTCGCACTTTAATGTCGTTTCGTTGATTCATTTCAACACTGACCAGGATTCTTTTGGCAAATCATCAGAGACTTAACTCAAGAATTTTTAGGATCAATCATCTGCTGATGATTACTTTAGTGGTCAAGAACAGCCGTTGATTAGAGAGGGAGAAAGAGAATGCTCATCTTCTGATGAAATCTCATCTCTTGGAGGACTATTATGTTAGTTTCCTGTTAAAAAAATGAATCCTTTTCATGCTTTTAGATGATTAGTAAGGCATTTTTACAAATATATAGGCTATTCTTGTTGATGTAGGGTCTGCCCATTGTTTGTTTACTACAGATATAGGATAGTTATAAAGCAGGCCTTTTTTGGGCAGTGCAAATGATGTAAATAGAAGTTTTATTCTCTCTAGACCTTGAAATTTTTGCCAATCGAAATCTTATTAGATGCA GCCCAAAATTTCGACTTCTCTCAAACCAGCTTCACCTTCTTCCCTCTCATTTTTCATCTCCGCTCCTCACAGATCGCCGCTCCCCACCAATCCACCGCCATTTTTTTGGAATACTCCATTCAAGCCCACTGGAATCTCGCGTTCCATAATGTCGGAAGCAAGGGATAGATTGGAGAGACAAGTGGATTATGCCGAGGTATTTGCTCGTCGGAGGTCGGAAGGTATATTGGACGAGCAAGAAATGGGTTCTAATTTGATAGGTACTCCGATTGCACGCGCCACTACGACGACTGCTGCTCAACAAAGGCCTACGAATCCCGGCCCTGGTGGAGGTGGTGCGAATCTGAGACGTACTTTTGGTTCTCCCATTTCTGGCGGAATTGGGCGTAATAGATTTCTTTATAGAACTCCAGTGTTGAGCCGTGAGAATCCGTCGGCTGGGAGTTCCAGGCGGAGTAGATCTCGGGGTAGGAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTTCGTGACATAACTGCAGTTGTGAGGGCAATCGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAGTAGTCCAGCTCCCTCGGACGAAAGAGCATTAGAGTATAGCGTCTCCGTGGCAAGTGATCATCAAGAGCCGATCATTTCTCTGCTTACCCCAAAACCAACCGTAGGAAAAGTTCCAAAGATTCTTCGTGGAATCGCAAATGAGAACACGGTAGGGGCCGAGACTCTGACTCCTCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAGTTACAGAAATTGAAAAGAACACCAAGTGCCAAGAAAGCAGAGAGGGAGAAAAGGGTTCGCACTTTAATGTCGTTTCGTTGATTCATTTCAACACTGACCAGGATTCTTTTGGCAAATCATCAGAGACTTAACTCAAGAATTTTTAGGATCAATCATCTGCTGATGATTACTTTAGTGGTCAAGAACAGCCGTTGATTAGAGAGGGAGAAAGAGAATGCTCATCTTCTGATGAAATCTCATCTCTTGGAGGACTATTATGTTAGTTTCCTGTTAAAAAAATGAATCCTTTTCATGCTTTTAGATGATTAGTAAGGCATTTTTACAAATATATAGGCTATTCTTGTTGATGTAGGGTCTGCCCATTGTTTGTTTACTACAGATATAGGATAGTTATAAAGCAGGCCTTTTTTGGGCAGTGCAAATGATGTAAATAGAAGTTTTATTCTCTCTAGACCTTGAAATTTTTGCCAATCGAAATCTTATTAGATGCA CCCAAAATTTCGACTTCTCTCAAACCAGCTTCACCTTCTTCCCTCTCATTTTTCATCTCCGCTCCTCACAGATCGCCGCTCCCCACCAATCCACCGCCATTTTTTTGGAATACTCCATTCAAGCCCACTGGAATCTCGCGTTCCATAATGTCGGAAGCAAGGGATAGATTGGAGAGACAAGTGGATTATGCCGAGGTATTTGCTCGTCGGAGGTCGGAAGGTATATTGGACGAGCAAGAAATGGGTTCTAATTTGATAGGTACTCCGATTGCACGCGCCACTACGACGACTGCTGCTCAACAAAGGCCTACGAATCCCGGCCCTGGTGGAGGTGGTGCGAATCTGAGACGTACTTTTGGTTCTCCCATTTCTGGCGGAATTGGGCGTAATAGATTTCTTTATAGAACTCCAGTGTTGAGCCGTGAGAATCCGTCGGCTGGGAGTTCCAGGCGGAGTAGATCTCGGGGTAGGAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTTCGTGACATAACTGCAGTTGTGAGGGCAATCGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAGTAGTCCAGCTCCCTCGGACGAAAGAGCATTAGAGTATAGCGTCTCCGTGGCAAGTGATCATCAAGAGCCGATCATTTCTCTGCTTACCCCAAAACCAACCGTAGGAAAAGTTCCAAAGATTCTTCGTGGAATCGCAAATGAGAACACGGTAGGGGCCGAGACTCTGACTCCTCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAGTTACAGAAATTGAAAAGAACACCAAGTGCCAAGAAAGCAGAGAGGGAGAAAAGGGTTCGCACTTTAATGTCGTTTCGTTGA PKISTSLKPASPSSLSFFISAPHRSPLPTNPPPFFWNTPFKPTGISRSIMSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTTAAQQRPTNPGPGGGGANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKPTVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
BLAST of MELO3C023180.2 vs. NCBI nr
Match: KGN53824.1 (hypothetical protein Csa_4G152290 [Cucumis sativus]) HSP 1 Score: 419.5 bits (1077), Expect = 9.7e-114 Identity = 251/287 (87.46%), Postives = 253/287 (88.15%), Query Frame = 0
BLAST of MELO3C023180.2 vs. NCBI nr
Match: XP_008460799.1 (PREDICTED: protein POLYCHOME [Cucumis melo]) HSP 1 Score: 389.8 bits (1000), Expect = 8.3e-105 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of MELO3C023180.2 vs. NCBI nr
Match: XP_004150162.1 (PREDICTED: protein POLYCHOME [Cucumis sativus]) HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103 Identity = 229/249 (91.97%), Postives = 229/249 (91.97%), Query Frame = 0
BLAST of MELO3C023180.2 vs. NCBI nr
Match: XP_023543597.1 (protein POLYCHOME-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 276.6 bits (706), Expect = 1.0e-70 Identity = 161/249 (64.66%), Postives = 172/249 (69.08%), Query Frame = 0
BLAST of MELO3C023180.2 vs. NCBI nr
Match: XP_022928675.1 (protein POLYCHOME-like [Cucurbita moschata]) HSP 1 Score: 275.0 bits (702), Expect = 3.0e-70 Identity = 161/249 (64.66%), Postives = 172/249 (69.08%), Query Frame = 0
BLAST of MELO3C023180.2 vs. TAIR10
Match: AT2G42260.1 (uv-b-insensitive 4) HSP 1 Score: 188.0 bits (476), Expect = 8.7e-48 Identity = 125/261 (47.89%), Postives = 148/261 (56.70%), Query Frame = 0
BLAST of MELO3C023180.2 vs. TAIR10
Match: AT3G57860.1 (UV-B-insensitive 4-like) HSP 1 Score: 139.4 bits (350), Expect = 3.5e-33 Identity = 107/261 (41.00%), Postives = 134/261 (51.34%), Query Frame = 0
BLAST of MELO3C023180.2 vs. Swiss-Prot
Match: sp|O48533|PYM_ARATH (Protein POLYCHOME OS=Arabidopsis thaliana OX=3702 GN=PYM PE=1 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.6e-46 Identity = 125/261 (47.89%), Postives = 148/261 (56.70%), Query Frame = 0
BLAST of MELO3C023180.2 vs. Swiss-Prot
Match: sp|Q9M2R1|GIG1_ARATH (Protein GIGAS CELL1 OS=Arabidopsis thaliana OX=3702 GN=GIG1 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 6.4e-32 Identity = 107/261 (41.00%), Postives = 134/261 (51.34%), Query Frame = 0
BLAST of MELO3C023180.2 vs. TrEMBL
Match: tr|A0A0A0KY99|A0A0A0KY99_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152290 PE=4 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 6.4e-114 Identity = 251/287 (87.46%), Postives = 253/287 (88.15%), Query Frame = 0
BLAST of MELO3C023180.2 vs. TrEMBL
Match: tr|A0A1S3CDA1|A0A1S3CDA1_CUCME (protein POLYCHOME OS=Cucumis melo OX=3656 GN=LOC103499559 PE=4 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 5.5e-105 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of MELO3C023180.2 vs. TrEMBL
Match: tr|A0A2I4DN34|A0A2I4DN34_9ROSI (protein POLYCHOME-like OS=Juglans regia OX=51240 GN=LOC108981745 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 1.2e-48 Identity = 137/264 (51.89%), Postives = 159/264 (60.23%), Query Frame = 0
BLAST of MELO3C023180.2 vs. TrEMBL
Match: tr|A0A2P4HWJ9|A0A2P4HWJ9_QUESU (Protein polychome OS=Quercus suber OX=58331 GN=CFP56_75328 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 7.5e-46 Identity = 129/262 (49.24%), Postives = 154/262 (58.78%), Query Frame = 0
BLAST of MELO3C023180.2 vs. TrEMBL
Match: tr|A0A2N9HHY2|A0A2N9HHY2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39407 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 9.8e-46 Identity = 133/264 (50.38%), Postives = 155/264 (58.71%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |