MELO3C023180.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C023180.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionprotein POLYCHOME
Locationchr08 : 16317043 .. 16320108 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCCAAAATTTCGACTTCTCTCAAACCAGCTTCACCTTCTTCCCTCTCATTTTTCATCTCCGCTCCTCACAGATCGCCGCTCCCCACCAATCCACCGCCATTTTTTTGGAATACTCCATTCAAGCCCACTGGAATCTCGCGGTATGTATCAATTTCCATCTTCCTTTTCTCCATTTCTCCATTTCTCCATTTCTTTCCTTTTTCTTTGGACAGTGTTTATATGAAATGTAGTTTTTGGCTTTAACTGAAAGATTCTTTGTTCTTGTTACTGTAGATTTAGATTAGGGCTTCTCTTGCTTTCTTCTTCTTTGAAATGTTTGTTTTCTTGCTTCTTCCTTTTGAAGTTCCATAATGTCGGAAGCAAGGGATAGATTGGAGAGACAAGTGGATTATGCCGAGGTATTTGCTCGTCGGAGGTCGGAAGGTATATTGGACGAGCAAGAAATGGGTTCTAATTTGATAGGTACTCCGATTGCACGCGCCACTACGACGACTGCTGCTCAACAAAGGCCTACGAATCCCGGCCCTGGTGGAGGTGGTGCGAATCTGAGACGTACTTTTGGTTCTCCCATTTCTGGCGGAATTGGGCGTAATAGATTTCTTTATAGAACTCCAGTGTTGAGCCGTGAGAATCCGTCGGCTGGGAGTTCCAGGCGGAGTAGATCTCGGGGTAGGAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTTCGTGACATAACTGCAGTTGTGAGGGTAAATGACTAATTCCTCTCTTACTTTCATATGGTTCTGCTTAATTTTTCAAGGATTTGTTCTGTTCTGCCTACAATATTGTGGATTACTTGGATATTTGATTCATATTGTTTATAGCAAACCTATTCTCATTGTCATTGCATATGGTATATACGCCAATTCCTACCCAGTAGATATTTGTTCTCCGATACAGTATCTTTGTTTGGATTGATTCTTATTTTAATTTACTTGATCTTCGGAGAACCCCCTATTTTGATTTTCTGGTGTAGTTGTTGTGATTCTTTTTTCTGTTTTTCAGTTGGTAAGCATTTGTTTTGATTTGATTTTTGACCCAAAATGTTGTTGCTTATGTCTAATATTTTTTTTTTTTTGTGAATCCTTAGATTGGATCACTTTCCTTTTTCTTTAAGTAAATTAATCAATAAATTTGTAGTGTTTTTAAGCTATGTACTACCTACCTGTTTGTCTGAAAAGGAGATTCTTTTGGTTTTGTAACATCCATGCCCAATGATTTCATATGAAACATCAACAGTCTGGATAATGAGAACCTGTCCACCATTAACTAAAGTTAACGTTATTCGTTTCCTTTTTTAGATTTTATATTCATTGTTTAGTTGGATTCCAATCCGTTTTTAGGCTTCATTTTCACCTGTTATTAGAACTACTTTTTGGTGGGCTCAATATGCTTCGGCTGGTTACTAGGATGCGCTGACTAGGTAGTCCAAATCAACATTTTGGGCGTTTGTCAAGCTGTGATTTGAAAGTCAATTAACATCTTGTTATCGTGACCTGTGGGGCATGTGTGCTGATTAAGCTTGTGTTGACACTTGTAAATTATCTGACCTGACGTTTCCAATGTATTAAATTAATTAATTTGTTTTGTTTGAAAAGTTTCAACGGACGAAAAAAGTATGTTTTGAGCAAGAAATATCAAATTTAATTTTTCAAGCATCTAGATGACCTTAAATTTGTTAAGACTACAGAATTCTATTTTAAGTTACTTAATTTAAGGCATCATGCATCACTCTTTCTAAGTAATACACTAAATCAAACCATTATGAGGAAAATCTTTGTGATGTATAAAAATAGAAATTTGATTTTCAAAAATGTATAAAGTAAATGTGTCGTTTTTTTTGGTGCCCTCGGTTTTTAGCATATATTATATCACGTTATAATGCATCGTGTCTTCCCTATGTCACATGTCTGTGTCTTTGTATCATTCATCTAAAATCTTTGGTACTTTTTAGGTTGATTCGCTGATAATTTTGCTGTCTATGTGAAACATTCCTCTCATCTTTTCACGTCTCTGAGGATTTCATTTGGGAATTGTCTTTTAGAAATTTCTTTGAACTATGTTCTTTCACTAATCAAAGGGAATTCTCTTTAAAGCATTGCATCTGGGCTCCTGCATATGGGCATTTGGATATTTAGTTACTGCTCCATTTCATTCAATATCACCTGTGTTTTTCCTAGAAATCTCCTTCCCTAGTTTTTCAATTGAGGCATTTGGAAGGTCATATGGTTAATTTCTAAGGAATCCTATTCCTTTAATCAGGCAATCGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAGTAGTCCAGCTCCCTCGGACGAAAGAGCATTAGAGTATAGCGTCTCCGTGGCAAGTGATCATCAAGAGCCGATCATTTCTCTGCTTACCCCAAAACCAACCGTAGGAAAAGTTCCAAAGATTCTTCGTGGAATCGCAAATGAGAACACGGTAGGGGCCGAGACTCTGACTCCTCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAGTTACAGAAATTGAAAAGAACACCAAGTGCCAAGAAAGCAGAGAGGGAGAAAAGGGTTCGCACTTTAATGTCGTTTCGTTGATTCATTTCAACACTGACCAGGATTCTTTTGGCAAATCATCAGAGACTTAACTCAAGAATTTTTAGGATCAATCATCTGCTGATGATTACTTTAGTGGTCAAGAACAGCCGTTGATTAGAGAGGGAGAAAGAGAATGCTCATCTTCTGATGAAATCTCATCTCTTGGAGGACTATTATGTTAGTTTCCTGTTAAAAAAATGAATCCTTTTCATGCTTTTAGATGATTAGTAAGGCATTTTTACAAATATATAGGCTATTCTTGTTGATGTAGGGTCTGCCCATTGTTTGTTTACTACAGATATAGGATAGTTATAAAGCAGGCCTTTTTTGGGCAGTGCAAATGATGTAAATAGAAGTTTTATTCTCTCTAGACCTTGAAATTTTTGCCAATCGAAATCTTATTAGATGCA

mRNA sequence

GCCCAAAATTTCGACTTCTCTCAAACCAGCTTCACCTTCTTCCCTCTCATTTTTCATCTCCGCTCCTCACAGATCGCCGCTCCCCACCAATCCACCGCCATTTTTTTGGAATACTCCATTCAAGCCCACTGGAATCTCGCGTTCCATAATGTCGGAAGCAAGGGATAGATTGGAGAGACAAGTGGATTATGCCGAGGTATTTGCTCGTCGGAGGTCGGAAGGTATATTGGACGAGCAAGAAATGGGTTCTAATTTGATAGGTACTCCGATTGCACGCGCCACTACGACGACTGCTGCTCAACAAAGGCCTACGAATCCCGGCCCTGGTGGAGGTGGTGCGAATCTGAGACGTACTTTTGGTTCTCCCATTTCTGGCGGAATTGGGCGTAATAGATTTCTTTATAGAACTCCAGTGTTGAGCCGTGAGAATCCGTCGGCTGGGAGTTCCAGGCGGAGTAGATCTCGGGGTAGGAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTTCGTGACATAACTGCAGTTGTGAGGGCAATCGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAGTAGTCCAGCTCCCTCGGACGAAAGAGCATTAGAGTATAGCGTCTCCGTGGCAAGTGATCATCAAGAGCCGATCATTTCTCTGCTTACCCCAAAACCAACCGTAGGAAAAGTTCCAAAGATTCTTCGTGGAATCGCAAATGAGAACACGGTAGGGGCCGAGACTCTGACTCCTCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAGTTACAGAAATTGAAAAGAACACCAAGTGCCAAGAAAGCAGAGAGGGAGAAAAGGGTTCGCACTTTAATGTCGTTTCGTTGATTCATTTCAACACTGACCAGGATTCTTTTGGCAAATCATCAGAGACTTAACTCAAGAATTTTTAGGATCAATCATCTGCTGATGATTACTTTAGTGGTCAAGAACAGCCGTTGATTAGAGAGGGAGAAAGAGAATGCTCATCTTCTGATGAAATCTCATCTCTTGGAGGACTATTATGTTAGTTTCCTGTTAAAAAAATGAATCCTTTTCATGCTTTTAGATGATTAGTAAGGCATTTTTACAAATATATAGGCTATTCTTGTTGATGTAGGGTCTGCCCATTGTTTGTTTACTACAGATATAGGATAGTTATAAAGCAGGCCTTTTTTGGGCAGTGCAAATGATGTAAATAGAAGTTTTATTCTCTCTAGACCTTGAAATTTTTGCCAATCGAAATCTTATTAGATGCA

Coding sequence (CDS)

CCCAAAATTTCGACTTCTCTCAAACCAGCTTCACCTTCTTCCCTCTCATTTTTCATCTCCGCTCCTCACAGATCGCCGCTCCCCACCAATCCACCGCCATTTTTTTGGAATACTCCATTCAAGCCCACTGGAATCTCGCGTTCCATAATGTCGGAAGCAAGGGATAGATTGGAGAGACAAGTGGATTATGCCGAGGTATTTGCTCGTCGGAGGTCGGAAGGTATATTGGACGAGCAAGAAATGGGTTCTAATTTGATAGGTACTCCGATTGCACGCGCCACTACGACGACTGCTGCTCAACAAAGGCCTACGAATCCCGGCCCTGGTGGAGGTGGTGCGAATCTGAGACGTACTTTTGGTTCTCCCATTTCTGGCGGAATTGGGCGTAATAGATTTCTTTATAGAACTCCAGTGTTGAGCCGTGAGAATCCGTCGGCTGGGAGTTCCAGGCGGAGTAGATCTCGGGGTAGGAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTTCGTGACATAACTGCAGTTGTGAGGGCAATCGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAGTAGTCCAGCTCCCTCGGACGAAAGAGCATTAGAGTATAGCGTCTCCGTGGCAAGTGATCATCAAGAGCCGATCATTTCTCTGCTTACCCCAAAACCAACCGTAGGAAAAGTTCCAAAGATTCTTCGTGGAATCGCAAATGAGAACACGGTAGGGGCCGAGACTCTGACTCCTCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAGTTACAGAAATTGAAAAGAACACCAAGTGCCAAGAAAGCAGAGAGGGAGAAAAGGGTTCGCACTTTAATGTCGTTTCGTTGA

Protein sequence

PKISTSLKPASPSSLSFFISAPHRSPLPTNPPPFFWNTPFKPTGISRSIMSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTTAAQQRPTNPGPGGGGANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKPTVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
BLAST of MELO3C023180.2 vs. NCBI nr
Match: KGN53824.1 (hypothetical protein Csa_4G152290 [Cucumis sativus])

HSP 1 Score: 419.5 bits (1077), Expect = 9.7e-114
Identity = 251/287 (87.46%), Postives = 253/287 (88.15%), Query Frame = 0

Query: 12  PSSLSFFISAPHRSPLPTNPPPFFWNTPFKPTGISRSIMSEARDRLERQVDYAEVFARRR 71
           PS  S  +    R P P +   FFWNTPFKPTGISRSIMSEARDRLERQVDYAEVFARRR
Sbjct: 28  PSHFSSPLLTDRRLP-PIHRHFFFWNTPFKPTGISRSIMSEARDRLERQVDYAEVFARRR 87

Query: 72  SEGILDEQEMGSNLIGTPIARATXXXXXXXXXXXXXXXXXXANLRRTFGSPISGGIGRNR 131
           SEGILDEQEMGSNLIGTPIARAT                   NLRRTFGSPISGGIGRNR
Sbjct: 88  SEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPGGGGTNLRRTFGSPISGGIGRNR 147

Query: 132 FLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTPLRDITAVVRAIERTXXXXXXXX 191
           FLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTPLRDITAVVRAIERTXXXXXXXX
Sbjct: 148 FLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTPLRDITAVVRAIERTXXXXXXXX 207

Query: 192 XXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKPTVGKVPKILRGIANENTVGAET 251
           XXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKPTVGKVPKILRGIANENTVGAE 
Sbjct: 208 XXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKPTVGKVPKILRGIANENTVGAEI 267

Query: 252 LTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR 299
           LTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
Sbjct: 268 LTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR 313

BLAST of MELO3C023180.2 vs. NCBI nr
Match: XP_008460799.1 (PREDICTED: protein POLYCHOME [Cucumis melo])

HSP 1 Score: 389.8 bits (1000), Expect = 8.3e-105
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0

Query: 50  MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATXXXXXXXXXXXXXXX 109
           MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATXXXXXXXXXXXXXXX
Sbjct: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATXXXXXXXXXXXXXXX 60

Query: 110 XXXANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 169
           XXXANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP
Sbjct: 61  XXXANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120

Query: 170 LRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKP 229
           LRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKP
Sbjct: 121 LRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKP 180

Query: 230 TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 289
           TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK
Sbjct: 181 TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240

Query: 290 RVRTLMSFR 299
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 249

BLAST of MELO3C023180.2 vs. NCBI nr
Match: XP_004150162.1 (PREDICTED: protein POLYCHOME [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103
Identity = 229/249 (91.97%), Postives = 229/249 (91.97%), Query Frame = 0

Query: 50  MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATXXXXXXXXXXXXXXX 109
           MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARAT               
Sbjct: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 60

Query: 110 XXXANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 169
               NLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP
Sbjct: 61  GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120

Query: 170 LRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKP 229
           LRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKP
Sbjct: 121 LRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKP 180

Query: 230 TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 289
           TVGKVPKILRGIANENTVGAE LTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK
Sbjct: 181 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240

Query: 290 RVRTLMSFR 299
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 249

BLAST of MELO3C023180.2 vs. NCBI nr
Match: XP_023543597.1 (protein POLYCHOME-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.6 bits (706), Expect = 1.0e-70
Identity = 161/249 (64.66%), Postives = 172/249 (69.08%), Query Frame = 0

Query: 50  MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATXXXXXXXXXXXXXXX 109
           MSE+RDRLERQVD+AEVFAR RSEGILDE+EM +NL+GTPI+RAT               
Sbjct: 1   MSESRDRLERQVDHAEVFARWRSEGILDEKEMSTNLLGTPISRAT---------TTTTVQ 60

Query: 110 XXXANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 169
               NLRR+FGSPISGGIGRNRFLYR+PV SREN  AGSSRRSRSRGRNSVLPIWYPRTP
Sbjct: 61  QRPTNLRRSFGSPISGGIGRNRFLYRSPVFSRENAVAGSSRRSRSRGRNSVLPIWYPRTP 120

Query: 170 LRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKP 229
           LRDITAVVRAIERT                   DER LE S           I L+TPK 
Sbjct: 121 LRDITAVVRAIERTRARMKENKGPGSDISPAPSDERVLEAS-----------IFLVTPKA 180

Query: 230 TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 289
           T+GKVPKILRGI N+N  GAETLTPQ KLLNSIDKVEKVVME               REK
Sbjct: 181 TIGKVPKILRGITNQNVGGAETLTPQNKLLNSIDKVEKVVMEXXXXXXXXXXXXXXXREK 229

Query: 290 RVRTLMSFR 299
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 229

BLAST of MELO3C023180.2 vs. NCBI nr
Match: XP_022928675.1 (protein POLYCHOME-like [Cucurbita moschata])

HSP 1 Score: 275.0 bits (702), Expect = 3.0e-70
Identity = 161/249 (64.66%), Postives = 172/249 (69.08%), Query Frame = 0

Query: 50  MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATXXXXXXXXXXXXXXX 109
           MSE+RDRLERQVD+AEVFAR RSEGILDE+EM +NL+ TPI+RAT               
Sbjct: 1   MSESRDRLERQVDHAEVFARWRSEGILDEKEMSTNLLRTPISRAT---------TTTTDQ 60

Query: 110 XXXANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 169
               NLRR+FGSPISGGIGRNRFLYR+PVLSREN  AGSSRRSRSRGRNSVLPIWYPRTP
Sbjct: 61  QRPTNLRRSFGSPISGGIGRNRFLYRSPVLSRENAVAGSSRRSRSRGRNSVLPIWYPRTP 120

Query: 170 LRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKP 229
           LRDITAVVRAIERT                   DER LE S           I L+TPK 
Sbjct: 121 LRDITAVVRAIERTRARMKENKGPGSDISPAPSDERVLEAS-----------IFLVTPKA 180

Query: 230 TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 289
           T+GKVPKILRGI N+N  GAETLTPQ KLLNSIDKVEKVVME               REK
Sbjct: 181 TIGKVPKILRGITNQNVGGAETLTPQNKLLNSIDKVEKVVMEXXXXXXXXXXXXXXXREK 229

Query: 290 RVRTLMSFR 299
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 229

BLAST of MELO3C023180.2 vs. TAIR10
Match: AT2G42260.1 (uv-b-insensitive 4)

HSP 1 Score: 188.0 bits (476), Expect = 8.7e-48
Identity = 125/261 (47.89%), Postives = 148/261 (56.70%), Query Frame = 0

Query: 50  MSEARDRLERQVDYAEVFARRRSEGI-LDEQEMGSNLIGTPIARATXXXXXXXXXXXXXX 109
           M EARDR+ERQVDY   F  RRS GI LDE     NL G+P+ R                
Sbjct: 1   MPEARDRIERQVDYPAAFLNRRSHGILLDEPATQHNLFGSPVQRVPSEATGGLGSIGQGS 60

Query: 110 XXXXANL-RRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPR 169
                 L R  FG   +GG  R +  +R+P   REN S G +RR R+R  NSVLP WYPR
Sbjct: 61  MTGRGGLVRGNFGIRRTGGGRRGQIQFRSP-QGRENMSLGVTRRGRARASNSVLPSWYPR 120

Query: 170 TPLRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTP 229
           TPLRDI+AVVRAIER                        L+  V ++  H E   S++TP
Sbjct: 121 TPLRDISAVVRAIER-RRARMGEGVGRDIETPTPQQLGVLDSLVPLSGAHLEHDYSMVTP 180

Query: 230 KPTVG----------KVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLK 289
            P++G          KV +IL  I  ENT   + LTP+KKLLNSIDKVEKVVMEE+QK+K
Sbjct: 181 GPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQKMK 240

Query: 290 RTPSAKKAEREKRVRTLMSFR 299
            TPSAK+AEREKRVRTLMS R
Sbjct: 241 STPSAKRAEREKRVRTLMSMR 259

BLAST of MELO3C023180.2 vs. TAIR10
Match: AT3G57860.1 (UV-B-insensitive 4-like)

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-33
Identity = 107/261 (41.00%), Postives = 134/261 (51.34%), Query Frame = 0

Query: 50  MSEARDRLERQVDYAEVFARRRSEGI-LDEQEMGSNLIGTPIARATXXXXXXXXXXXXXX 109
           M EARDR ER VDY+ +FA RR  GI LDE +   +LI +P+                  
Sbjct: 1   MPEARDRTERPVDYSTIFANRRRHGILLDEPDSRLSLIESPV-----------NPDIGSI 60

Query: 110 XXXXANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRT 169
                 +R  F +   G        +R P   REN    ++RR R  G   +LP WYPRT
Sbjct: 61  GGTGGLVRGNFTTWRPGNGRGGHTPFRLP-QGRENMPIVTARRGRGGG---LLPSWYPRT 120

Query: 170 PLRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPK 229
           PLRDIT +VRAIER                        LE  V ++ +H+    S++TP 
Sbjct: 121 PLRDITHIVRAIERRRGAGTGGDDGRVIEIPTHRQVGVLESPVPLSGEHK---CSMVTPG 180

Query: 230 PTVG----------KVPKILRGIANE-NTVGAETLTPQKKLLNSIDKVEKVVMEELQKLK 289
           P+VG          KV K+L  I  E     A  +TP+KKLLNSIDKVEK+VM E+QKLK
Sbjct: 181 PSVGFKRSCPPSTAKVQKMLLDITKEIAEEEAGFITPEKKLLNSIDKVEKIVMAEIQKLK 240

Query: 290 RTPSAKKAEREKRVRTLMSFR 299
            TP AK+ EREKRVRTLM+ R
Sbjct: 241 STPQAKREEREKRVRTLMTMR 243

BLAST of MELO3C023180.2 vs. Swiss-Prot
Match: sp|O48533|PYM_ARATH (Protein POLYCHOME OS=Arabidopsis thaliana OX=3702 GN=PYM PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.6e-46
Identity = 125/261 (47.89%), Postives = 148/261 (56.70%), Query Frame = 0

Query: 50  MSEARDRLERQVDYAEVFARRRSEGI-LDEQEMGSNLIGTPIARATXXXXXXXXXXXXXX 109
           M EARDR+ERQVDY   F  RRS GI LDE     NL G+P+ R                
Sbjct: 1   MPEARDRIERQVDYPAAFLNRRSHGILLDEPATQHNLFGSPVQRVPSEATGGLGSIGQGS 60

Query: 110 XXXXANL-RRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPR 169
                 L R  FG   +GG  R +  +R+P   REN S G +RR R+R  NSVLP WYPR
Sbjct: 61  MTGRGGLVRGNFGIRRTGGGRRGQIQFRSP-QGRENMSLGVTRRGRARASNSVLPSWYPR 120

Query: 170 TPLRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTP 229
           TPLRDI+AVVRAIER                        L+  V ++  H E   S++TP
Sbjct: 121 TPLRDISAVVRAIER-RRARMGEGVGRDIETPTPQQLGVLDSLVPLSGAHLEHDYSMVTP 180

Query: 230 KPTVG----------KVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLK 289
            P++G          KV +IL  I  ENT   + LTP+KKLLNSIDKVEKVVMEE+QK+K
Sbjct: 181 GPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQKMK 240

Query: 290 RTPSAKKAEREKRVRTLMSFR 299
            TPSAK+AEREKRVRTLMS R
Sbjct: 241 STPSAKRAEREKRVRTLMSMR 259

BLAST of MELO3C023180.2 vs. Swiss-Prot
Match: sp|Q9M2R1|GIG1_ARATH (Protein GIGAS CELL1 OS=Arabidopsis thaliana OX=3702 GN=GIG1 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.4e-32
Identity = 107/261 (41.00%), Postives = 134/261 (51.34%), Query Frame = 0

Query: 50  MSEARDRLERQVDYAEVFARRRSEGI-LDEQEMGSNLIGTPIARATXXXXXXXXXXXXXX 109
           M EARDR ER VDY+ +FA RR  GI LDE +   +LI +P+                  
Sbjct: 1   MPEARDRTERPVDYSTIFANRRRHGILLDEPDSRLSLIESPV-----------NPDIGSI 60

Query: 110 XXXXANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRT 169
                 +R  F +   G        +R P   REN    ++RR R  G   +LP WYPRT
Sbjct: 61  GGTGGLVRGNFTTWRPGNGRGGHTPFRLP-QGRENMPIVTARRGRGGG---LLPSWYPRT 120

Query: 170 PLRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPK 229
           PLRDIT +VRAIER                        LE  V ++ +H+    S++TP 
Sbjct: 121 PLRDITHIVRAIERRRGAGTGGDDGRVIEIPTHRQVGVLESPVPLSGEHK---CSMVTPG 180

Query: 230 PTVG----------KVPKILRGIANE-NTVGAETLTPQKKLLNSIDKVEKVVMEELQKLK 289
           P+VG          KV K+L  I  E     A  +TP+KKLLNSIDKVEK+VM E+QKLK
Sbjct: 181 PSVGFKRSCPPSTAKVQKMLLDITKEIAEEEAGFITPEKKLLNSIDKVEKIVMAEIQKLK 240

Query: 290 RTPSAKKAEREKRVRTLMSFR 299
            TP AK+ EREKRVRTLM+ R
Sbjct: 241 STPQAKREEREKRVRTLMTMR 243

BLAST of MELO3C023180.2 vs. TrEMBL
Match: tr|A0A0A0KY99|A0A0A0KY99_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152290 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 6.4e-114
Identity = 251/287 (87.46%), Postives = 253/287 (88.15%), Query Frame = 0

Query: 12  PSSLSFFISAPHRSPLPTNPPPFFWNTPFKPTGISRSIMSEARDRLERQVDYAEVFARRR 71
           PS  S  +    R P P +   FFWNTPFKPTGISRSIMSEARDRLERQVDYAEVFARRR
Sbjct: 28  PSHFSSPLLTDRRLP-PIHRHFFFWNTPFKPTGISRSIMSEARDRLERQVDYAEVFARRR 87

Query: 72  SEGILDEQEMGSNLIGTPIARATXXXXXXXXXXXXXXXXXXANLRRTFGSPISGGIGRNR 131
           SEGILDEQEMGSNLIGTPIARAT                   NLRRTFGSPISGGIGRNR
Sbjct: 88  SEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPGGGGTNLRRTFGSPISGGIGRNR 147

Query: 132 FLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTPLRDITAVVRAIERTXXXXXXXX 191
           FLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTPLRDITAVVRAIERTXXXXXXXX
Sbjct: 148 FLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTPLRDITAVVRAIERTXXXXXXXX 207

Query: 192 XXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKPTVGKVPKILRGIANENTVGAET 251
           XXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKPTVGKVPKILRGIANENTVGAE 
Sbjct: 208 XXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKPTVGKVPKILRGIANENTVGAEI 267

Query: 252 LTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR 299
           LTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR
Sbjct: 268 LTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR 313

BLAST of MELO3C023180.2 vs. TrEMBL
Match: tr|A0A1S3CDA1|A0A1S3CDA1_CUCME (protein POLYCHOME OS=Cucumis melo OX=3656 GN=LOC103499559 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 5.5e-105
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0

Query: 50  MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATXXXXXXXXXXXXXXX 109
           MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATXXXXXXXXXXXXXXX
Sbjct: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATXXXXXXXXXXXXXXX 60

Query: 110 XXXANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 169
           XXXANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP
Sbjct: 61  XXXANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120

Query: 170 LRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKP 229
           LRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKP
Sbjct: 121 LRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLLTPKP 180

Query: 230 TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 289
           TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK
Sbjct: 181 TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240

Query: 290 RVRTLMSFR 299
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 249

BLAST of MELO3C023180.2 vs. TrEMBL
Match: tr|A0A2I4DN34|A0A2I4DN34_9ROSI (protein POLYCHOME-like OS=Juglans regia OX=51240 GN=LOC108981745 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.2e-48
Identity = 137/264 (51.89%), Postives = 159/264 (60.23%), Query Frame = 0

Query: 50  MSEARDRLERQVDYAEVFARRRSEGI---LDEQEMGSNLIGTPIARATXXXXXXXXXXXX 109
           M E+RDR+ R VD A +FARRRS  +   L+EQE GSNL G+PI R T            
Sbjct: 1   MPESRDRMSRPVDLASLFARRRSASVGVALEEQETGSNLFGSPIERVTIATTPATRGRTA 60

Query: 110 XXXXXXANLRR-TFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGR--NSVLPI 169
                   LRR  FG+P S    R R +Y TP   REN  + S+RR  +RGR  +SVLP 
Sbjct: 61  LGATRGGGLRRGGFGTPRS---VRGRIMYGTPASGREN--SQSTRRGSARGRRGSSVLPS 120

Query: 170 WYPRTPLRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIIS 229
           +YPRTPLRDIT+VVRAIER                     +  ++ S+ V     E  +S
Sbjct: 121 YYPRTPLRDITSVVRAIER-RRARLRDVEGQQIENPATEGQSVVDPSLPVTGAQLEHDLS 180

Query: 230 LLTPK---------PTVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQ 289
           L +P          P VGKVPKIL GIANEN   +E +TPQKKLLNSIDKVEKVVMEELQ
Sbjct: 181 LTSPNPDIGVKPRTPAVGKVPKILLGIANENAGESEFVTPQKKLLNSIDKVEKVVMEELQ 240

Query: 290 KLKRTPSAKKAEREKRVRTLMSFR 299
           KLKRTPSAKKAEREKRVRTLMS R
Sbjct: 241 KLKRTPSAKKAEREKRVRTLMSMR 258

BLAST of MELO3C023180.2 vs. TrEMBL
Match: tr|A0A2P4HWJ9|A0A2P4HWJ9_QUESU (Protein polychome OS=Quercus suber OX=58331 GN=CFP56_75328 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 7.5e-46
Identity = 129/262 (49.24%), Postives = 154/262 (58.78%), Query Frame = 0

Query: 50  MSEARDRLERQVDYAEVFARRRSEG---ILDEQEMGSNLIGTPIARATXXXXXXXXXXXX 109
           M E+RDRL R VD+A +FARRR+ G   ++D+ E+G NL G+P                 
Sbjct: 1   MPESRDRLVRPVDHAAIFARRRTPGTGILIDDPEVGPNLFGSP--------APVRQVATP 60

Query: 110 XXXXXXANLRRTFGSPISGGIGRNRFLYRTPVLSRE-NPSAGSSRRSRSRGRNSVLPIWY 169
                    R  FG+P      R R LYRTP   +E NP        R R R+SVLP WY
Sbjct: 61  ATRGLFIRGRGGFGTPRH---VRGRNLYRTPASGQENNPRTAQRSSGRGRPRSSVLPSWY 120

Query: 170 PRTPLRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIISLL 229
           PRTPLRDITAVVRAIERT                    +R L+ SV+ +S   +  IS++
Sbjct: 121 PRTPLRDITAVVRAIERT-RARLRDVEGQQIETPVPEGQRVLDPSVTQSSAQLKHNISMV 180

Query: 230 TPK---------PTVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKL 289
           +P          P VGKVPKIL GI N+N   +E+LTPQKKLLNSID VEKVVMEELQKL
Sbjct: 181 SPSLAVGVKPRTPAVGKVPKILLGITNQNAGESESLTPQKKLLNSIDTVEKVVMEELQKL 240

Query: 290 KRTPSAKKAEREKRVRTLMSFR 299
           KR+PSAKKAEREKR+RTLMS R
Sbjct: 241 KRSPSAKKAEREKRIRTLMSMR 250

BLAST of MELO3C023180.2 vs. TrEMBL
Match: tr|A0A2N9HHY2|A0A2N9HHY2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39407 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 9.8e-46
Identity = 133/264 (50.38%), Postives = 155/264 (58.71%), Query Frame = 0

Query: 50  MSEARDRLERQVDYAEVFARRRSEGI---LDEQEMGSNLIGTPIARATXXXXXXXXXXXX 109
           M E+RDRL R +DYA VF+ RRS GI   LD+ EMGSNL G+P+                
Sbjct: 1   MPESRDRLSRPLDYAAVFSHRRSAGIGVLLDDPEMGSNLFGSPL----PARRVATVTTPA 60

Query: 110 XXXXXXANLRRTFGSPISGGIGRNRFLYRTPVLSREN-PSAGSSRRSRSRGR--NSVLPI 169
                   L R  G+P S    R R LY +P   REN PS  + RR+  RGR  +SVLP 
Sbjct: 61  TRGRTGLRLTRGRGTPRS---MRGRNLYGSPDFGRENTPSTSTGRRNSVRGRPGSSVLPS 120

Query: 170 WYPRTPLRDITAVVRAIERTXXXXXXXXXXXXXXXXXXXDERALEYSVSVASDHQEPIIS 229
           WYPR PLRDITAVVRAIER                     +R L+ SV+ +    +  IS
Sbjct: 121 WYPRAPLRDITAVVRAIER-RRARLGDVEGQPIESPIPEGQRVLDPSVTPSGAQLKHNIS 180

Query: 230 LLTPK---------PTVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQ 289
           +++P          P VGKVPKIL GI ++N   +E LTPQKKLLNSID VEKVVMEELQ
Sbjct: 181 MISPNTAVGVKPCTPAVGKVPKILLGITDQNAGESEFLTPQKKLLNSIDTVEKVVMEELQ 240

Query: 290 KLKRTPSAKKAEREKRVRTLMSFR 299
           KLKRTP AKKAEREKRVRTLMS R
Sbjct: 241 KLKRTPGAKKAEREKRVRTLMSMR 256

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN53824.19.7e-11487.46hypothetical protein Csa_4G152290 [Cucumis sativus][more]
XP_008460799.18.3e-105100.00PREDICTED: protein POLYCHOME [Cucumis melo][more]
XP_004150162.11.2e-10391.97PREDICTED: protein POLYCHOME [Cucumis sativus][more]
XP_023543597.11.0e-7064.66protein POLYCHOME-like [Cucurbita pepo subsp. pepo][more]
XP_022928675.13.0e-7064.66protein POLYCHOME-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT2G42260.18.7e-4847.89uv-b-insensitive 4[more]
AT3G57860.13.5e-3341.00UV-B-insensitive 4-like[more]
Match NameE-valueIdentityDescription
sp|O48533|PYM_ARATH1.6e-4647.89Protein POLYCHOME OS=Arabidopsis thaliana OX=3702 GN=PYM PE=1 SV=1[more]
sp|Q9M2R1|GIG1_ARATH6.4e-3241.00Protein GIGAS CELL1 OS=Arabidopsis thaliana OX=3702 GN=GIG1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0KY99|A0A0A0KY99_CUCSA6.4e-11487.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152290 PE=4 SV=1[more]
tr|A0A1S3CDA1|A0A1S3CDA1_CUCME5.5e-105100.00protein POLYCHOME OS=Cucumis melo OX=3656 GN=LOC103499559 PE=4 SV=1[more]
tr|A0A2I4DN34|A0A2I4DN34_9ROSI1.2e-4851.89protein POLYCHOME-like OS=Juglans regia OX=51240 GN=LOC108981745 PE=4 SV=1[more]
tr|A0A2P4HWJ9|A0A2P4HWJ9_QUESU7.5e-4649.24Protein polychome OS=Quercus suber OX=58331 GN=CFP56_75328 PE=4 SV=1[more]
tr|A0A2N9HHY2|A0A2N9HHY2_FAGSY9.8e-4650.38Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39407 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0051783regulation of nuclear division
GO:1904667negative regulation of ubiquitin protein ligase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR034590POLYCHOME/GIG1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051783 regulation of nuclear division
biological_process GO:0008150 biological_process
biological_process GO:0042023 DNA endoreduplication
biological_process GO:0009960 endosperm development
biological_process GO:0009561 megagametogenesis
biological_process GO:1904667 negative regulation of ubiquitin protein ligase activity
biological_process GO:1900426 positive regulation of defense response to bacterium
biological_process GO:0010224 response to UV-B
biological_process GO:0010091 trichome branching
biological_process GO:0044699 single-organism process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023180.2.1MELO3C023180.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..298
NoneNo IPR availablePANTHERPTHR35119:SF1PROTEIN GIGAS CELL1-RELATEDcoord: 50..298
IPR034590POLYCHOME/GIGAS CELL1PANTHERPTHR35119FAMILY NOT NAMEDcoord: 50..298