CSPI04G10380 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G10380
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	uv-b-insensitive 4
Location	Chr4 : 8501488 .. 8504676 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAAATTTCGACTTCTCTCAAACCAGCTTCACCTTCTTCCCTCTCATTTTTCATCTCCGCTCCTCACAGATCGCCGCCTCCCACCAATCCACCGCCATTTTTTTTTTGGAATACTCCATTCAAGCCCACTGGAATCTCACGGTATGAATCAATTTCCATCTTCCTTTTCTCCATTTCTCTATTTCTCTTTTCTTTGGACAATGTTTACTGAAATGTAGTTTTTGGCTTTAACTCAAAGATTCTTAGTTCTTGTTACTGTAGATTTGGATTAGGGCTTCTCTTGCTTTCTTCTTCTTTGAAATGTTTGTTTTCTTGCTTCTTCCTTTTGAAGTTCCATAATGTCGGAAGCAAGGGATAGATTGGAGAGGCAAGTGGATTATGCCGAGGTATTTGCTCGTCGGAGGTCGGAAGGTATATTGGACGAGCAAGAAATGGGTTCTAATTTGATAGGTACTCCGATTGCACGCGCCACTACGACCAATACTGCTCAACAAAGACCTACGAATCCCGGCCCTGGTGGAGGTGGTACAAATCTGAGACGTACTTTTGGTTCTCCCATTTCTGGCGGAATTGGGCGTAATAGATTTCTTTATAGAACTCCAGTGTTGAGCCGTGAGAATCCGTCGGCTGGGAGTTCCCGGCGGAGTAGATCTCGGGGTAGGAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTTCGTGACATAACTGCAGTTGTGAGGGTAAATTACTATTTTCCCTCTTACTTTCATATTTTTCTGCTTAGTTTTTCAAGGATTTCTTCTGTTCTGCCTACAAGTTTGTGGATTACTTGGATATTTGATTCATATTGTTTATAGCAAACATGTTCTCATTGTTGCATATGGTCTCTGGTATGTATATACATACGCCAATTCCTACCTAGTAGATATTTGTTCTCCGATGCAGGCTCTTATTTTAATTTACTTCATCTTCGGAGAACCCCATCTTTTGATTTTCTGGTGTAGATGTTGTGATTATTTTTTCTGTTGTTCTGTTGGAAAGCATTTGTTATGATTTGATTTTTGACCGAAAATGTTGTTGCATATGTCTAATATTTTTTTGTGAATCCTTAGATTGGATCACTTTCCTTTTTCTTTAAGTTAATTAATCAATAAATTTTAAGTGTTTTTAAGCTATGTACTACCTACCTGTTTGTCTAAAAAGGAGATTCTTTTGGTTTTGTAATATCCATGCCCAATGATTTCATATGAAACATTAACAGTCTGGATAATGAGAACCTGTCCACCATTAACTAAAGTTAACATAACTCGTCTCCTTTCTTAGATTTTATATTCATTGTTTAATTGGATTCCAATCCGTTTTTAGGCTTCATTTTCACCTGTTATTAGAACTACTTTTTGGTGGGCTCAATATGCTTCGGCTGGTTACTAGGATTCGCTGACTAGGTAGTCCAAATCAACATTTTGGGCGTTTGTCAAGCTGTCATTTGAAAGTCAAATTGCTGATTTTACTAGCCAATTAAAATTTATAATTATGATTGCAGTGATATTAACATCTGTTGTTATCGTGACTTGTGGGGCATGTGTGCTGATTAAGCTTGTGTCGACACTTTTAAATTATCTGACCTTACGTTTCCAATGTATTAAATTAATTAAATTATTTTGTTTGAAAAGTTTCAACGGACGAAAAAATATGTTTTGAGCCAGAATATCAATTTTAATTTTTCAAGCATCTGGATGCATGTATATTAATTGACCTTGAGATTGTTAAGATTACGTAATTTTATTTTAAGTAACTTAATGTAAGGCATTATGCATCACTTTTCTCGGTGAATCATACACTAAATCAAACCATTATGAAGAAAATCTTTGTAATGTCTAAAAATAGAATTTTGATTTTTAAAATATGTGTAAAGTAAATGTGTCTTTTTTTTTGTGCTATCAGTTTTTACCATATATTATATCACGTTATAGTGCATCATGTGAGGCTATGTCACATGTCTGTGTCTTTGTACCCTTCATCTAAATTCTTTGCTACTTTTTTGGTTGATTCGCTGATAATTTTGCTGTCTATGTGAAATATTCCTCTCATCTTTTCACGTCTCTGAGGATTTTATTTGGGAATTGTCTTTTAGAAGTTTTCTTTGAGCTATGTTCTTTCAATAATCAAAGGGAATTCTCTTTAAAGCATTGCTGCGTCTGGGCTCAACTTATTTAAATTTCCATTTCCTGCTTTATCCTGCATGTGGGCATTTGGATATTTTGTTACTGCTCCATTTCATTAAATATCACCTGTGTTTTTCCTAGAAATCTCCTTTCCTAGTTTTTCAATTGAGGCATTTGGAAGGCCATGTGGTTAATTTCTAAGGAATCGTATTCCTTTAATCAGGCAATCGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAGTAGTCCAGCTCCCTCGGACGAAAGAGCACTAGAGTATAGCGTATCCGTGGCAAGTGATCATCAAGAGCCAATCATTTCTCTGCTCACCCCAAAACCAACCGTAGGAAAAGTTCCAAAGATTCTTCGTGGAATCGCGAATGAGAACACGGTAGGGGCCGAAATTCTGACTCCTCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAGTTACAGAAATTGAAAAGAACACCAAGTGCCAAGAAAGCAGAGAGGGAGAAAAGGGTTCGCACTTTAATGTCGTTTCGTTGATTCATTTCAACACTGACCAGAATTCTTTTGGCAAATCATCAGAGACTCAACTCCAGAATTTTTAGGATCAATCATCTGCTGATGATTACTTTAGTGGTCAAGAACGGCCGTTGATTAGAGAGGGAGAAAGAGAATGCTCATCGTCTGATGAAATCTCATCTCTTGGAGGACTATTTTGTTAGTTTCCTGTTAAAAAAATGAATCCTTTTCATTTGCATAAACCATCTATAATATGCTTTTAGATGATTAGTAAGGCATTTTTACAAATATGTAGGCTATTCTTGTTGATGTAGGGTCTGCCCATTGTTTGTTTACTACAGATATAGGATAGTTATAAAGCAGGCCTTTTTTGGGCAGTGGAAATGATGTAAATAGAAGTTTTATTCACTCTAGAACTTGACATTTTTGCCTATCAAAATCTTATTAGATGCATATTTTTTTATTGGTTTCT

mRNA sequence

ATGTCGGAAGCAAGGGATAGATTGGAGAGGCAAGTGGATTATGCCGAGGTATTTGCTCGTCGGAGGTCGGAAGGTATATTGGACGAGCAAGAAATGGGTTCTAATTTGATAGGTACTCCGATTGCACGCGCCACTACGACCAATACTGCTCAACAAAGACCTACGAATCCCGGCCCTGGTGGAGGTGGTACAAATCTGAGACGTACTTTTGGTTCTCCCATTTCTGGCGGAATTGGGCGTAATAGATTTCTTTATAGAACTCCAGTGTTGAGCCGTGAGAATCCGTCGGCTGGGAGTTCCCGGCGGAGTAGATCTCGGGGTAGGAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTTCGTGACATAACTGCAGTTGTGAGGGCAATCGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAGTAGTCCAGCTCCCTCGGACGAAAGAGCACTAGAGTATAGCGTATCCGTGGCAAGTGATCATCAAGAGCCAATCATTTCTCTGCTCACCCCAAAACCAACCGTAGGAAAAGTTCCAAAGATTCTTCGTGGAATCGCGAATGAGAACACGGTAGGGGCCGAAATTCTGACTCCTCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAGTTACAGAAATTGAAAAGAACACCAAGTGCCAAGAAAGCAGAGAGGGAGAAAAGGGTTCGCACTTTAATGTCGTTTCGTTGA

Coding sequence (CDS)

ATGTCGGAAGCAAGGGATAGATTGGAGAGGCAAGTGGATTATGCCGAGGTATTTGCTCGTCGGAGGTCGGAAGGTATATTGGACGAGCAAGAAATGGGTTCTAATTTGATAGGTACTCCGATTGCACGCGCCACTACGACCAATACTGCTCAACAAAGACCTACGAATCCCGGCCCTGGTGGAGGTGGTACAAATCTGAGACGTACTTTTGGTTCTCCCATTTCTGGCGGAATTGGGCGTAATAGATTTCTTTATAGAACTCCAGTGTTGAGCCGTGAGAATCCGTCGGCTGGGAGTTCCCGGCGGAGTAGATCTCGGGGTAGGAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTTCGTGACATAACTGCAGTTGTGAGGGCAATCGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAGTAGTCCAGCTCCCTCGGACGAAAGAGCACTAGAGTATAGCGTATCCGTGGCAAGTGATCATCAAGAGCCAATCATTTCTCTGCTCACCCCAAAACCAACCGTAGGAAAAGTTCCAAAGATTCTTCGTGGAATCGCGAATGAGAACACGGTAGGGGCCGAAATTCTGACTCCTCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAGTTACAGAAATTGAAAAGAACACCAAGTGCCAAGAAAGCAGAGAGGGAGAAAAGGGTTCGCACTTTAATGTCGTTTCGTTGA

Homology

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BLAST of CSPI04G10380 vs. Swiss-Prot
Match: PYM_ARATH (Protein POLYCHOME OS=Arabidopsis thaliana GN=PYM PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.6e-52
Identity = 135/261 (51.72%), Postives = 164/261 (62.84%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR+ERQVDY   F  RRS GIL DE     NL G+P+ R  +  T        G 
Sbjct: 1   MPEARDRIERQVDYPAAFLNRRSHGILLDEPATQHNLFGSPVQRVPSEATGGLGSIGQGS 60

Query: 61  -GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPR 120
             G G  +R  FG   +GG  R +  +R+P   REN S G +RR R+R  NSVLP WYPR
Sbjct: 61  MTGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENMSLGVTRRGRARASNSVLPSWYPR 120

Query: 121 TPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTP 180
           TPLRDI+AVVRAIER RAR+ E  G+  ++ P P     L+  V ++  H E   S++TP
Sbjct: 121 TPLRDISAVVRAIERRRARMGEGVGRDIET-PTPQQLGVLDSLVPLSGAHLEHDYSMVTP 180

Query: 181 KPTVG----------KVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLK 240
            P++G          KV +IL  I  ENT   + LTP+KKLLNSIDKVEKVVMEE+QK+K
Sbjct: 181 GPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQKMK 240

Query: 241 RTPSAKKAEREKRVRTLMSFR 250
            TPSAK+AEREKRVRTLMS R
Sbjct: 241 STPSAKRAEREKRVRTLMSMR 259

[Close]

BLAST of CSPI04G10380 vs. Swiss-Prot
Match: GIG1_ARATH (Protein GIGAS CELL1 OS=Arabidopsis thaliana GN=GIG1 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.3e-34
Identity = 116/266 (43.61%), Postives = 143/266 (53.76%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR ER VDY+ +FA RR  GIL DE +   +LI +P+            P     
Sbjct: 1   MPEARDRTERPVDYSTIFANRRRHGILLDEPDSRLSLIESPV-----------NPDIGSI 60

Query: 61  GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRT 120
           GG G  +R  F +   G        +R P   REN    ++RR R  G   +LP WYPRT
Sbjct: 61  GGTGGLVRGNFTTWRPGNGRGGHTPFRLPQ-GRENMPIVTARRGRGGG---LLPSWYPRT 120

Query: 121 PLRDITAVVRAIERTRARLRENEGQGSDSS-----PAPSDERALEYSVSVASDHQEPIIS 180
           PLRDIT +VRAIER     R   G G D       P       LE  V ++ +H+    S
Sbjct: 121 PLRDITHIVRAIER-----RRGAGTGGDDGRVIEIPTHRQVGVLESPVPLSGEHK---CS 180

Query: 181 LLTPKPTVG----------KVPKILRGIANENTVG-AEILTPQKKLLNSIDKVEKVVMEE 240
           ++TP P+VG          KV K+L  I  E     A  +TP+KKLLNSIDKVEK+VM E
Sbjct: 181 MVTPGPSVGFKRSCPPSTAKVQKMLLDITKEIAEEEAGFITPEKKLLNSIDKVEKIVMAE 240

Query: 241 LQKLKRTPSAKKAEREKRVRTLMSFR 250
           +QKLK TP AK+ EREKRVRTLM+ R
Sbjct: 241 IQKLKSTPQAKREEREKRVRTLMTMR 243

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BLAST of CSPI04G10380 vs. TrEMBL
Match: A0A0A0KY99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152290 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 1.4e-129
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 60
           MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG
Sbjct: 65  MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 124

Query: 61  GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120
           GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP
Sbjct: 125 GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 184

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180
           LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP
Sbjct: 185 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 244

Query: 181 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240
           TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK
Sbjct: 245 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 304

Query: 241 RVRTLMSFR 250
           RVRTLMSFR
Sbjct: 305 RVRTLMSFR 313

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BLAST of CSPI04G10380 vs. TrEMBL
Match: F6HL68_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07790 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-51
Identity = 147/267 (55.06%), Postives = 169/267 (63.30%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSE--GIL-DEQEMGSNLIGTPIARATTTNTAQ---QRP 60
           M E+RDRL R  D AE+F RRRS   GIL D  E  SNL  +P  R TTT T     +  
Sbjct: 1   MPESRDRLSRPEDIAELFLRRRSGILGILADGSERSSNLFASPSRRETTTRTTTLGARGA 60

Query: 61  TNPGPGGGGTNLRRTFGSP-ISGGIGRNRFLYRTPVLSREN-PSAGSSRRSRSRGRNSVL 120
           T      GG   R  FG+P I  G GR R +YR+P+  REN P+ GS RR R R  NSVL
Sbjct: 61  TGILASRGGGVGRGGFGTPRIGTGRGRGRAVYRSPLFGRENTPATGSGRRGRGRSGNSVL 120

Query: 121 PIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQ-EP 180
           P WYPRTPLRDIT VVRAIER RARLRE +GQ  D  P P D   +   +   S  Q E 
Sbjct: 121 PSWYPRTPLRDITHVVRAIERRRARLREIDGQQIDI-PIPQDISDVHDPILPPSSAQLEQ 180

Query: 181 IISLLTPKPT---------VGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVME 240
            IS+++P PT         VGKVPKIL  I ++   G++ LTPQKKLLNSID VEK VM+
Sbjct: 181 DISMISPSPTSGMKLVPKAVGKVPKILLDITDQTGGGSDFLTPQKKLLNSIDTVEKAVMD 240

Query: 241 ELQKLKRTPSAKKAEREKRVRTLMSFR 250
           EL KLKRTPSAK+AE+EKRVRTLMS R
Sbjct: 241 ELGKLKRTPSAKRAEQEKRVRTLMSMR 266

[Close]

BLAST of CSPI04G10380 vs. TrEMBL
Match: D7LI35_ARALL (Polychome, UV-B-insensitive 4 OS=Arabidopsis lyrata subsp. lyrata GN=UVI4 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 7.3e-49
Identity = 132/260 (50.77%), Postives = 161/260 (61.92%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR+ER VDY   F  RRS GIL DE     NL G+P+ R  +  T          
Sbjct: 1   MPEARDRIERPVDYPAAFLNRRSHGILLDEPATHHNLFGSPVQRVPSEATGLGSVGQGSM 60

Query: 61  GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRT 120
            G G  +R  FG   +GG  R +  +R+P   REN S G +RR R+R  NSVLP WYPRT
Sbjct: 61  MGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENMSLGVTRRGRARASNSVLPSWYPRT 120

Query: 121 PLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPK 180
           PLRD++AVVRA+ER RAR+ E  G+  ++ P P     L+  V ++    E   S++TP 
Sbjct: 121 PLRDVSAVVRAVERRRARMGEGVGRDIET-PTPQQLGVLDSLVPLSGAQLEHDYSMVTPG 180

Query: 181 PTVG----------KVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKR 240
           P+VG          KV +IL  I  ENT   + LTPQKKLLNSIDKVEKVVMEE+QK+K 
Sbjct: 181 PSVGFKRPWPPSTAKVHQILLDITRENTGEEDALTPQKKLLNSIDKVEKVVMEEIQKMKS 240

Query: 241 TPSAKKAEREKRVRTLMSFR 250
           TPSAK+AEREKRVRTLMS R
Sbjct: 241 TPSAKRAEREKRVRTLMSMR 258

[Close]

BLAST of CSPI04G10380 vs. TrEMBL
Match: V4LQQ2_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10017150mg PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-47
Identity = 133/260 (51.15%), Postives = 161/260 (61.92%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR+ER VDY   F  RRS GIL D+     +L G+P+ R          P+ P  
Sbjct: 1   MPEARDRIERPVDYPAAFLSRRSNGILHDDPVTQHSLFGSPVQRV---------PSEPVI 60

Query: 61  GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRT 120
           G GG  +R  FG   +GG  R +  +R+P   REN S G +RR R+R   SVLP WYPRT
Sbjct: 61  GRGGL-VRGNFGIRRTGGGRRGQTQFRSPQ-GRENMSLGVARRGRARASTSVLPSWYPRT 120

Query: 121 PLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPK 180
           PLRD++ VVRAIER RAR+ E  G+  ++ P P     L+  V ++    E   S++TP 
Sbjct: 121 PLRDVSGVVRAIERRRARMGEGVGRDIET-PTPQQLGVLDSLVPLSGAQLEHNYSMVTPG 180

Query: 181 PTVG----------KVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKR 240
           P+VG          KV KIL  I  ENT   E LTPQKKLLNSIDKVEKVVMEE+QK+K 
Sbjct: 181 PSVGFKRPWPPSAAKVHKILLDITRENTGEEESLTPQKKLLNSIDKVEKVVMEEIQKMKS 240

Query: 241 TPSAKKAEREKRVRTLMSFR 250
           TPSAK+AEREKRVRTLMS R
Sbjct: 241 TPSAKRAEREKRVRTLMSMR 248

[Close]

BLAST of CSPI04G10380 vs. TrEMBL
Match: R0HDW2_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10023892mg PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.0e-47
Identity = 129/260 (49.62%), Postives = 159/260 (61.15%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR+ER VDY   F  RRS G+L DE     +L G+P+ R     T          
Sbjct: 1   MPEARDRIERPVDYPAAFLNRRSNGVLLDEPATQHSLFGSPVQRVPPEATGLGSIGQGSM 60

Query: 61  GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRT 120
            G G  +R  FG   +GG  R +  +R+P   REN S G +RR R+R   SVLP WYPRT
Sbjct: 61  TGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENTSLGVTRRGRARAATSVLPSWYPRT 120

Query: 121 PLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPK 180
           PLRD+++VVRAIER RAR+ E  G+  ++ P P     L+  V ++    E   S++TP 
Sbjct: 121 PLRDVSSVVRAIERRRARMGEGVGRDIET-PTPQQLGVLDSLVPLSGAQLEHDYSMVTPG 180

Query: 181 PTVG----------KVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKR 240
           P+VG          KV +IL  I  ENT   + LTPQKKLLNSIDKVEKVVMEE+QK+K 
Sbjct: 181 PSVGFKRPWPPSTAKVHQILLDITRENTGEEDALTPQKKLLNSIDKVEKVVMEEIQKMKS 240

Query: 241 TPSAKKAEREKRVRTLMSFR 250
           TPSAK+AEREKRVRTLMS R
Sbjct: 241 TPSAKRAEREKRVRTLMSMR 258

[Close]

BLAST of CSPI04G10380 vs. TAIR10
Match: AT2G42260.1 (AT2G42260.1 uv-b-insensitive 4)

HSP 1 Score: 206.1 bits (523), Expect = 2.6e-53
Identity = 135/261 (51.72%), Postives = 164/261 (62.84%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR+ERQVDY   F  RRS GIL DE     NL G+P+ R  +  T        G 
Sbjct: 1   MPEARDRIERQVDYPAAFLNRRSHGILLDEPATQHNLFGSPVQRVPSEATGGLGSIGQGS 60

Query: 61  -GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPR 120
             G G  +R  FG   +GG  R +  +R+P   REN S G +RR R+R  NSVLP WYPR
Sbjct: 61  MTGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENMSLGVTRRGRARASNSVLPSWYPR 120

Query: 121 TPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTP 180
           TPLRDI+AVVRAIER RAR+ E  G+  ++ P P     L+  V ++  H E   S++TP
Sbjct: 121 TPLRDISAVVRAIERRRARMGEGVGRDIET-PTPQQLGVLDSLVPLSGAHLEHDYSMVTP 180

Query: 181 KPTVG----------KVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLK 240
            P++G          KV +IL  I  ENT   + LTP+KKLLNSIDKVEKVVMEE+QK+K
Sbjct: 181 GPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQKMK 240

Query: 241 RTPSAKKAEREKRVRTLMSFR 250
            TPSAK+AEREKRVRTLMS R
Sbjct: 241 STPSAKRAEREKRVRTLMSMR 259

[Close]

BLAST of CSPI04G10380 vs. TAIR10
Match: AT3G57860.1 (AT3G57860.1 UV-B-insensitive 4-like)

HSP 1 Score: 145.6 bits (366), Expect = 4.1e-35
Identity = 116/266 (43.61%), Postives = 143/266 (53.76%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR ER VDY+ +FA RR  GIL DE +   +LI +P+            P     
Sbjct: 1   MPEARDRTERPVDYSTIFANRRRHGILLDEPDSRLSLIESPV-----------NPDIGSI 60

Query: 61  GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRT 120
           GG G  +R  F +   G        +R P   REN    ++RR R  G   +LP WYPRT
Sbjct: 61  GGTGGLVRGNFTTWRPGNGRGGHTPFRLPQ-GRENMPIVTARRGRGGG---LLPSWYPRT 120

Query: 121 PLRDITAVVRAIERTRARLRENEGQGSDSS-----PAPSDERALEYSVSVASDHQEPIIS 180
           PLRDIT +VRAIER     R   G G D       P       LE  V ++ +H+    S
Sbjct: 121 PLRDITHIVRAIER-----RRGAGTGGDDGRVIEIPTHRQVGVLESPVPLSGEHK---CS 180

Query: 181 LLTPKPTVG----------KVPKILRGIANENTVG-AEILTPQKKLLNSIDKVEKVVMEE 240
           ++TP P+VG          KV K+L  I  E     A  +TP+KKLLNSIDKVEK+VM E
Sbjct: 181 MVTPGPSVGFKRSCPPSTAKVQKMLLDITKEIAEEEAGFITPEKKLLNSIDKVEKIVMAE 240

Query: 241 LQKLKRTPSAKKAEREKRVRTLMSFR 250
           +QKLK TP AK+ EREKRVRTLM+ R
Sbjct: 241 IQKLKSTPQAKREEREKRVRTLMTMR 243

[Close]

BLAST of CSPI04G10380 vs. NCBI nr
Match: gi|449464890|ref|XP_004150162.1| (PREDICTED: protein POLYCHOME [Cucumis sativus])

HSP 1 Score: 470.3 bits (1209), Expect = 2.1e-129
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 60
           MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG
Sbjct: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 60

Query: 61  GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120
           GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP
Sbjct: 61  GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180
           LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP
Sbjct: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180

Query: 181 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240
           TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK
Sbjct: 181 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240

Query: 241 RVRTLMSFR 250
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 249

[Close]

BLAST of CSPI04G10380 vs. NCBI nr
Match: gi|700198666|gb|KGN53824.1| (hypothetical protein Csa_4G152290 [Cucumis sativus])

HSP 1 Score: 470.3 bits (1209), Expect = 2.1e-129
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 60
           MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG
Sbjct: 65  MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 124

Query: 61  GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120
           GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP
Sbjct: 125 GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 184

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180
           LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP
Sbjct: 185 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 244

Query: 181 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240
           TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK
Sbjct: 245 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 304

Query: 241 RVRTLMSFR 250
           RVRTLMSFR
Sbjct: 305 RVRTLMSFR 313

[Close]

BLAST of CSPI04G10380 vs. NCBI nr
Match: gi|659121757|ref|XP_008460799.1| (PREDICTED: protein POLYCHOME [Cucumis melo])

HSP 1 Score: 462.2 bits (1188), Expect = 5.7e-127
Identity = 245/249 (98.39%), Postives = 245/249 (98.39%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 60
           MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTT  AQQRPTNPGPG
Sbjct: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTTAAQQRPTNPGPG 60

Query: 61  GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120
           GGG NLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP
Sbjct: 61  GGGANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180
           LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP
Sbjct: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180

Query: 181 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240
           TVGKVPKILRGIANENTVGAE LTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK
Sbjct: 181 TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240

Query: 241 RVRTLMSFR 250
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 249

[Close]

BLAST of CSPI04G10380 vs. NCBI nr
Match: gi|225441692|ref|XP_002277253.1| (PREDICTED: protein POLYCHOME [Vitis vinifera])

HSP 1 Score: 211.5 bits (537), Expect = 1.7e-51
Identity = 147/267 (55.06%), Postives = 169/267 (63.30%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSE--GIL-DEQEMGSNLIGTPIARATTTNTAQ---QRP 60
           M E+RDRL R  D AE+F RRRS   GIL D  E  SNL  +P  R TTT T     +  
Sbjct: 1   MPESRDRLSRPEDIAELFLRRRSGILGILADGSERSSNLFASPSRRETTTRTTTLGARGA 60

Query: 61  TNPGPGGGGTNLRRTFGSP-ISGGIGRNRFLYRTPVLSREN-PSAGSSRRSRSRGRNSVL 120
           T      GG   R  FG+P I  G GR R +YR+P+  REN P+ GS RR R R  NSVL
Sbjct: 61  TGILASRGGGVGRGGFGTPRIGTGRGRGRAVYRSPLFGRENTPATGSGRRGRGRSGNSVL 120

Query: 121 PIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQ-EP 180
           P WYPRTPLRDIT VVRAIER RARLRE +GQ  D  P P D   +   +   S  Q E 
Sbjct: 121 PSWYPRTPLRDITHVVRAIERRRARLREIDGQQIDI-PIPQDISDVHDPILPPSSAQLEQ 180

Query: 181 IISLLTPKPT---------VGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVME 240
            IS+++P PT         VGKVPKIL  I ++   G++ LTPQKKLLNSID VEK VM+
Sbjct: 181 DISMISPSPTSGMKLVPKAVGKVPKILLDITDQTGGGSDFLTPQKKLLNSIDTVEKAVMD 240

Query: 241 ELQKLKRTPSAKKAEREKRVRTLMSFR 250
           EL KLKRTPSAK+AE+EKRVRTLMS R
Sbjct: 241 ELGKLKRTPSAKRAEQEKRVRTLMSMR 266

[Close]

BLAST of CSPI04G10380 vs. NCBI nr
Match: gi|1009106074|ref|XP_015868489.1| (PREDICTED: protein POLYCHOME-like [Ziziphus jujuba])

HSP 1 Score: 208.4 bits (529), Expect = 1.5e-50
Identity = 140/260 (53.85%), Postives = 167/260 (64.23%), Query Frame = 1


Query: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTA-QQRPTNPGP 60
           M E RDRL R VD A VF R RS G+++E +  S+L G+P+ + TT  T   +R T  G 
Sbjct: 1   MPEPRDRLSRPVDVAAVFVRWRSRGVVNESDAASDLFGSPMRQQTTATTPIARRVTGFGA 60

Query: 61  GGGGTNLRRTFGSPIS-GGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPR 120
             GG   R  FG+P +    GRNR    +   +REN  AG++RR R R  NSVLP WYPR
Sbjct: 61  TRGGGFGRGIFGTPRTVNRRGRNR--PGSSSAARENTPAGTARRGRGRVTNSVLPSWYPR 120

Query: 121 TPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTP 180
           TPLRDITA+V AIER RARLR +EG   ++ P   D   L+  VSV+    E  I + +P
Sbjct: 121 TPLRDITAIVTAIERRRARLRGDEGLQVET-PIYQDPGVLDPPVSVSPAPLEQDIPIASP 180

Query: 181 K---------PTVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKR 240
                     P+VGKVPKIL GI N+ T  +E LTPQKKLLN+ID VEK V EELQKLKR
Sbjct: 181 STAVRKKGCPPSVGKVPKILLGITNQTTGESECLTPQKKLLNNIDTVEKAVKEELQKLKR 240

Query: 241 TPSAKKAEREKRVRTLMSFR 250
           TPSAKKAEREKRVRTLMS R
Sbjct: 241 TPSAKKAEREKRVRTLMSMR 257

The following BLAST results are available for this feature:

BLAST of CSPI04G10380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PYM_ARATH	4.6e-52	51.72	Protein POLYCHOME OS=Arabidopsis thaliana GN=PYM PE=1 SV=1	[more]
GIG1_ARATH	7.3e-34	43.61	Protein GIGAS CELL1 OS=Arabidopsis thaliana GN=GIG1 PE=1 SV=1	[more]

BLAST of CSPI04G10380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY99_CUCSA	1.4e-129	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152290 PE=4 SV=1	[more]
F6HL68_VITVI	1.2e-51	55.06	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07790 PE=4 SV=...	[more]
D7LI35_ARALL	7.3e-49	50.77	Polychome, UV-B-insensitive 4 OS=Arabidopsis lyrata subsp. lyrata GN=UVI4 PE=4 S...	[more]
V4LQQ2_EUTSA	1.4e-47	51.15	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10017150mg PE=4 SV=1	[more]
R0HDW2_9BRAS	4.0e-47	49.62	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10023892mg PE=4 SV=1	[more]

BLAST of CSPI04G10380 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42260.1	2.6e-53	51.72	uv-b-insensitive 4	[more]
AT3G57860.1	4.1e-35	43.61	UV-B-insensitive 4-like	[more]

BLAST of CSPI04G10380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464890\|ref\|XP_004150162.1\|	2.1e-129	100.00	PREDICTED: protein POLYCHOME [Cucumis sativus]	[more]
gi\|700198666\|gb\|KGN53824.1\|	2.1e-129	100.00	hypothetical protein Csa_4G152290 [Cucumis sativus]	[more]
gi\|659121757\|ref\|XP_008460799.1\|	5.7e-127	98.39	PREDICTED: protein POLYCHOME [Cucumis melo]	[more]
gi\|225441692\|ref\|XP_002277253.1\|	1.7e-51	55.06	PREDICTED: protein POLYCHOME [Vitis vinifera]	[more]
gi\|1009106074\|ref\|XP_015868489.1\|	1.5e-50	53.85	PREDICTED: protein POLYCHOME-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0044699	single-organism process
biological_process	GO:0042023	DNA endoreduplication
biological_process	GO:0009960	endosperm development
biological_process	GO:0009561	megagametogenesis
biological_process	GO:1900426	positive regulation of defense response to bacterium
biological_process	GO:0051783	regulation of nuclear division
biological_process	GO:0010224	response to UV-B
biological_process	GO:0010091	trichome branching
biological_process	GO:1904667	negative regulation of ubiquitin protein ligase activity
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G10380.1	CSPI04G10380.1	mRNA
CSPI04G10380.2	CSPI04G10380.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 121..141 scor
None	No IPR available	PANTHER	PTHR35119	FAMILY NOT NAMED	coord: 1..33 score: 8.4E-46coord: 70..249 score: 8.4
None	No IPR available	PANTHER	PTHR35119:SF1	PROTEIN GIGAS CELL1-RELATED	coord: 70..249 score: 8.4E-46coord: 1..33 score: 8.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G10380	Csa4G152290	Cucumber (Chinese Long) v2	cpicuB182
CSPI04G10380	MELO3C023180	Melon (DHL92) v3.5.1	cpimeB332
CSPI04G10380	ClCG04G000340	Watermelon (Charleston Gray)	cpiwcgB320
CSPI04G10380	Lsi01G018920	Bottle gourd (USVL1VR-Ls)	cpilsiB259
CSPI04G10380	MELO3C023180.2	Melon (DHL92) v3.6.1	cpimedB315
CSPI04G10380	CsaV3_4G010540	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G10380	Cla97C04G068720	Watermelon (97103) v2	cpiwmbB311
CSPI04G10380	Bhi03G002127	Wax gourd	cpiwgoB397
CSPI04G10380	Cucsa.038040	Cucumber (Gy14) v1	cgycpiB011
CSPI04G10380	CmaCh03G000790	Cucurbita maxima (Rimu)	cmacpiB681
CSPI04G10380	CmoCh03G000800	Cucurbita moschata (Rifu)	cmocpiB674
CSPI04G10380	Cp4.1LG10g11700	Cucurbita pepo (Zucchini)	cpecpiB069
CSPI04G10380	CsGy4G010070	Cucumber (Gy14) v2	cgybcpiB168
CSPI04G10380	Carg22466	Silver-seed gourd	carcpiB0222

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None