Cucsa.038040 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.038040
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
Descriptionuv-b-insensitive 4
Locationscaffold00493 : 85198 .. 88278 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCCCAAAATTTCGACTTCTCTCAAACCAGCTTCACCTTCTTCCCTCTCATTTTTCATCTCCGCTCCTCACAGATCGCCGCCTCCCACCAATCCACCGCCATTTTTTTTTtGGAATACTCCATTCAAGCCCACTGGAATCTCACGGTATGAATCAATTTCCATCTTCCTTTTCTCCATttCTCcATTtCTCTTTTCTTTGGACAATGTTTACTGAAATGTAGTTTTTGGCTTTAACTCAAAGATTCTTAGTTCTTGTTACTGTAGATTTGGATTAGGGCTTCTCTTGCTTTCTTCTTCTTTGAAATGTTTGTTTTCTTGCTTCTTCCTTTTGAAGTTCCATAATGTCGGAAGCAAGGGATAGATTGGAGAGGCAAGTGGATTATGCCGAGGTATTTGCTCGTCGGAGGTCGGAAGGTATATTGGACGAGCAAGAAATGGGTTCTAATTTGATAGGTACTCCGATTGCACGCGCCACTACGACCAATACTGCTCAaCAAAGACCTACGAATCCCGGCCCTGGTGGAGGTGGTACAAATCTGAGACGTACTTTTGGTTCTCCCATTTCTGGCGGAATTGGGCGTAATAGATTTCTTTATAGAACTCCAGTGTTGAGCCGTGAGAATCCGTCGGCTGGGAGTTCCCGGCGGAGTAGATCTCGGGGTAGGAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTTCGTGACATAACTGCAGTTGTGAGGGTAAATTACTATTTTCCCTCTTACTTTCATATTTTTCTGCTTAATTTTTCAAGGATTTCTTCTGTTCTGCCTACAAgTTTGTGGATTACTTGGATATTTGATTCATATTGTTTATAGCAAACATGTTCTCATTGTTGCATATGGTCTCTGGTATGTATATACATACGCCAATTCCTACCTAGTAGATATTTGTTCTCCGATGCAGGCTCTTATTTTAATTTACTTCATCTTCGGAGAACCCCATCTTTTGATTTTCTGGTGTAGATGTTGTGATTATTTTTTCTGTTGTTCTGTTGGAAAGCATTTGTTATGATTTGATTTTTGACCGAAAATGTTGTTGCATATGTCTAATATTTTTTtGTGAATCCTTAGATTGGATCACTTTCCTTTTTCTTTAAGTTAATTAATCAATAAATTTTAAGTGTTTTTAAGCTATGTACTACCTACCTGTTTGTCTAAAAAGGAGATTCTTTTGGTTTTGTAATATCCATGCCCAATGATTTCATATGAAACATTAACAGTCTGGATAATGAGAACCTGTCCACCATTAACTAAAGTTAACATAACTCGTCTCCTTTCTTAGATTTTATATTCATTGTTTAATTGGATTCCAATCCGTTTTTAGGCTTCATTTTCACCTGTTATTAGAACTACTTTTTGGTGGGCTCAATATGCTTCGGCTGGTTACTAGGATTCGCTGACTAGGTAGTCCAAATCAACATTTTGGGCGTTTGTCAAGCTGTCATTTGAAAGTCAAATTGCTGATTTTACTAGCCAATTAAAATTTtTAATTATGATTGCAGTGATATTAACATCTGTTGTTATCGTGACTTGTGGGGCATGTGTGCTGATTAAGCTTGTGTCGACACTTTTAAATTATCTGACCTTACGTTTCCAATGTATTAAATTAATTAAATTATTTTGTTTGAAAAGTTTCAACGGACGAAAAAATATGTTTTGAGCCAGAATATCAATTTTAATTTTTCAAGCATCTGGATGCATGTATATTAATTGACCTTGAAATTGTTAAGATTACGTAATTTTATTTTAAGTAACTTAATGTAAGGCATTATGCATCACTTTTCTCGGTGAATCATACACTAAATCAAACCATTATGAAGAAAATCTTTGTAATGTCTAAAAATAGAATTTTGATTTTTAAAATATGTGTAAAGTAAATGTGTCTTTTTTTTtGTGCTATCAGTTTTTACCATATATTATATCACGTTATAGTGCATCATGTGAGGCTATGTCACATGTCTGTGTCTTTGTACCCTTCATCTAAATTCTTTGCTACTTTTTTGGTTGATTCGCTGATAATTTTGCTGTCTATGTGAAATATTCCTCTCATCTTTTCACGTCTCTGAGGATTTTATTTGGGAATTGTCTTTTAGAAGTTTTCTTTGAGCTATGTTCTTTCAATAAtCAAAGGGAATTCTCTTTAAAGCATTGCTGCGTCTGGGCTCAACTTATTTAAATTTCCATTTCCTGCTTTATCCTGCATGTGGgCATTTGGATATTTTGTTACTGCTCCATTTCATTAAATATCACCTGTGTTTTTCCTAGAAATCTCCTTTCCTAGTTTTTCAATTGAGGCATTTGGAAGgCCATGTGGTTAATTTCTAAGGAATCGTATTCCTTTAATCAGGCAATCGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAGTAGTCCAGCTCCCTCGGACGAAAGAGCACTAGAGTATAGCGTATCCGTGGCAAGTGATCATCAAGAGCCAATCATTTCTCTGCTCACCCCAAAACCAACCGTAGGAAAAGTTCCAAAGATTCTTCGTGGAATCGCGAATGAGAACACGGTAGGGGCCGAAATTCTGACTCCTCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAGTTACAGAAATTGAAAAGAACACCAAGTGCCAAGAAAGCAGAGAGGGAGAAAAGGGTTCGCACTTTAATGTCGTTTCGTTGATTCATTTCAACACTGACCAGAATTCTTTTGGCAAATCATCAGAGACTCAACTCCAGAATTTTTAGGATCAATCATCTGCTGATGATTACTTTAGTGGTCAAGAACGGCCGTTGATTAGAGAGGGAGAAAGAGAATGCTCATCGTCTGATGAAATCTCATCTCTTGGAtGACTATTATGTTAGTTTCCTGTTAAAAAAATGAATCCTTTTCATTTGCATAAACCATCTATAATATGCTTTTAGATGATTAGTAAGGCATTTTTACAAATATGTAGGCTATTCTTGTTGATGTAgTGCCCATTGTTTGTTTACTACAGATATAGGATAGTTATAAAGCAGGCC

mRNA sequence

TGCCCAAAATTTCGACTTCTCTCAAACCAGCTTCACCTTCTTCCCTCTCATTTTTCATCTCCGCTCCTCACAGATCGCCGCCTCCCACCAATCCACCGCCATTTTTTTTTTGGAATACTCCATTCAAGCCCACTGGAATCTCACGTTCCATAATGTCGGAAGCAAGGGATAGATTGGAGAGGCAAGTGGATTATGCCGAGGTATTTGCTCGTCGGAGGTCGGAAGGTATATTGGACGAGCAAGAAATGGGTTCTAATTTGATAGGTACTCCGATTGCACGCGCCACTACGACCAATACTGCTCAACAAAGACCTACGAATCCCGGCCCTGGTGGAGGTGGTACAAATCTGAGACGTACTTTTGGTTCTCCCATTTCTGGCGGAATTGGGCGTAATAGATTTCTTTATAGAACTCCAGTGTTGAGCCGTGAGAATCCGTCGGCTGGGAGTTCCCGGCGGAGTAGATCTCGGGGTAGGAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTTCGTGACATAACTGCAGTTGTGAGGGCAATCGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAGTAGTCCAGCTCCCTCGGACGAAAGAGCACTAGAGTATAGCGTATCCGTGGCAAGTGATCATCAAGAGCCAATCATTTCTCTGCTCACCCCAAAACCAACCGTAGGAAAAGTTCCAAAGATTCTTCGTGGAATCGCGAATGAGAACACGGTAGGGGCCGAAATTCTGACTCCTCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAGTTACAGAAATTGAAAAGAACACCAAGTGCCAAGAAAGCAGAGAGGGAGAAAAGGGTTCGCACTTTAATGTCGTTTCGTTGATTCATTTCAACACTGACCAGAATTCTTTTGGCAAATCATCAGAGACTCAACTCCAGAATTTTTAGGATCAATCATCTGCTGATGATTACTTTAGTGGTCAAGAACGGCCGTTGATTAGAGAGGGAGAAAGAGAATGCTCATCGTCTGATGAAATCTCATCTCTTGGATGACTATTATGTTAGTTTCCTGTTAAAAAAATGAATCCTTTTCATTTGCATAAACCATCTATAATATGCTTTTAGATGATTAGTAAGGCATTTTTACAAATATGTAGGCTATTCTTGTTGATGTAGTGCCCATTGTTTGTTTACTACAGATATAGGATAGTTATAAAGCAGGCC

Coding sequence (CDS)

ATGTCGGAAGCAAGGGATAGATTGGAGAGGCAAGTGGATTATGCCGAGGTATTTGCTCGTCGGAGGTCGGAAGGTATATTGGACGAGCAAGAAATGGGTTCTAATTTGATAGGTACTCCGATTGCACGCGCCACTACGACCAATACTGCTCAaCAAAGACCTACGAATCCCGGCCCTGGTGGAGGTGGTACAAATCTGAGACGTACTTTTGGTTCTCCCATTTCTGGCGGAATTGGGCGTAATAGATTTCTTTATAGAACTCCAGTGTTGAGCCGTGAGAATCCGTCGGCTGGGAGTTCCCGGCGGAGTAGATCTCGGGGTAGGAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTTCGTGACATAACTGCAGTTGTGAGGGCAATCGAAAGGACAAGAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAGTAGTCCAGCTCCCTCGGACGAAAGAGCACTAGAGTATAGCGTATCCGTGGCAAGTGATCATCAAGAGCCAATCATTTCTCTGCTCACCCCAAAACCAACCGTAGGAAAAGTTCCAAAGATTCTTCGTGGAATCGCGAATGAGAACACGGTAGGGGCCGAAATTCTGACTCCTCAGAAGAAGCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAGTTACAGAAATTGAAAAGAACACCAAGTGCCAAGAAAGCAGAGAGGGAGAAAAGGGTTCGCACTTTAATGTCGTTTCGTTGA

Protein sequence

MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPGGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKPTVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSFR*
Homology
[Close]
BLAST of Cucsa.038040 vs. Swiss-Prot
Match: PYM_ARATH (Protein POLYCHOME OS=Arabidopsis thaliana GN=PYM PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.7e-57
Identity = 135/261 (51.72%), Postives = 164/261 (62.84%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR+ERQVDY   F  RRS GIL DE     NL G+P+ R  +  T        G 
Sbjct: 1   MPEARDRIERQVDYPAAFLNRRSHGILLDEPATQHNLFGSPVQRVPSEATGGLGSIGQGS 60

Query: 61  -GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPR 120
             G G  +R  FG   +GG  R +  +R+P   REN S G +RR R+R  NSVLP WYPR
Sbjct: 61  MTGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENMSLGVTRRGRARASNSVLPSWYPR 120

Query: 121 TPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTP 180
           TPLRDI+AVVRAIER RAR+ E  G+  ++ P P     L+  V ++  H E   S++TP
Sbjct: 121 TPLRDISAVVRAIERRRARMGEGVGRDIET-PTPQQLGVLDSLVPLSGAHLEHDYSMVTP 180

Query: 181 KPTVG----------KVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLK 240
            P++G          KV +IL  I  ENT   + LTP+KKLLNSIDKVEKVVMEE+QK+K
Sbjct: 181 GPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQKMK 240

Query: 241 RTPSAKKAEREKRVRTLMSFR 250
            TPSAK+AEREKRVRTLMS R
Sbjct: 241 STPSAKRAEREKRVRTLMSMR 259

[Close]
BLAST of Cucsa.038040 vs. Swiss-Prot
Match: GIG1_ARATH (Protein GIGAS CELL1 OS=Arabidopsis thaliana GN=GIG1 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-38
Identity = 116/266 (43.61%), Postives = 143/266 (53.76%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR ER VDY+ +FA RR  GIL DE +   +LI +P+            P     
Sbjct: 1   MPEARDRTERPVDYSTIFANRRRHGILLDEPDSRLSLIESPV-----------NPDIGSI 60

Query: 61  GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRT 120
           GG G  +R  F +   G        +R P   REN    ++RR R  G   +LP WYPRT
Sbjct: 61  GGTGGLVRGNFTTWRPGNGRGGHTPFRLPQ-GRENMPIVTARRGRGGG---LLPSWYPRT 120

Query: 121 PLRDITAVVRAIERTRARLRENEGQGSDSS-----PAPSDERALEYSVSVASDHQEPIIS 180
           PLRDIT +VRAIER     R   G G D       P       LE  V ++ +H+    S
Sbjct: 121 PLRDITHIVRAIER-----RRGAGTGGDDGRVIEIPTHRQVGVLESPVPLSGEHK---CS 180

Query: 181 LLTPKPTVG----------KVPKILRGIANENTVG-AEILTPQKKLLNSIDKVEKVVMEE 240
           ++TP P+VG          KV K+L  I  E     A  +TP+KKLLNSIDKVEK+VM E
Sbjct: 181 MVTPGPSVGFKRSCPPSTAKVQKMLLDITKEIAEEEAGFITPEKKLLNSIDKVEKIVMAE 240

Query: 241 LQKLKRTPSAKKAEREKRVRTLMSFR 250
           +QKLK TP AK+ EREKRVRTLM+ R
Sbjct: 241 IQKLKSTPQAKREEREKRVRTLMTMR 243

[Close]
BLAST of Cucsa.038040 vs. TrEMBL
Match: A0A0A0KY99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152290 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 1.5e-134
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 60
           MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG
Sbjct: 65  MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 124

Query: 61  GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120
           GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP
Sbjct: 125 GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 184

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180
           LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP
Sbjct: 185 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 244

Query: 181 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240
           TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK
Sbjct: 245 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 304

Query: 241 RVRTLMSFR 250
           RVRTLMSFR
Sbjct: 305 RVRTLMSFR 313

[Close]
BLAST of Cucsa.038040 vs. TrEMBL
Match: F6HL68_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07790 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.6e-56
Identity = 147/267 (55.06%), Postives = 169/267 (63.30%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSE--GIL-DEQEMGSNLIGTPIARATTTNTAQ---QRP 60
           M E+RDRL R  D AE+F RRRS   GIL D  E  SNL  +P  R TTT T     +  
Sbjct: 1   MPESRDRLSRPEDIAELFLRRRSGILGILADGSERSSNLFASPSRRETTTRTTTLGARGA 60

Query: 61  TNPGPGGGGTNLRRTFGSP-ISGGIGRNRFLYRTPVLSREN-PSAGSSRRSRSRGRNSVL 120
           T      GG   R  FG+P I  G GR R +YR+P+  REN P+ GS RR R R  NSVL
Sbjct: 61  TGILASRGGGVGRGGFGTPRIGTGRGRGRAVYRSPLFGRENTPATGSGRRGRGRSGNSVL 120

Query: 121 PIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQ-EP 180
           P WYPRTPLRDIT VVRAIER RARLRE +GQ  D  P P D   +   +   S  Q E 
Sbjct: 121 PSWYPRTPLRDITHVVRAIERRRARLREIDGQQIDI-PIPQDISDVHDPILPPSSAQLEQ 180

Query: 181 IISLLTPKPT---------VGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVME 240
            IS+++P PT         VGKVPKIL  I ++   G++ LTPQKKLLNSID VEK VM+
Sbjct: 181 DISMISPSPTSGMKLVPKAVGKVPKILLDITDQTGGGSDFLTPQKKLLNSIDTVEKAVMD 240

Query: 241 ELQKLKRTPSAKKAEREKRVRTLMSFR 250
           EL KLKRTPSAK+AE+EKRVRTLMS R
Sbjct: 241 ELGKLKRTPSAKRAEQEKRVRTLMSMR 266

[Close]
BLAST of Cucsa.038040 vs. TrEMBL
Match: D7LI35_ARALL (Polychome, UV-B-insensitive 4 OS=Arabidopsis lyrata subsp. lyrata GN=UVI4 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 7.6e-54
Identity = 132/260 (50.77%), Postives = 161/260 (61.92%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR+ER VDY   F  RRS GIL DE     NL G+P+ R  +  T          
Sbjct: 1   MPEARDRIERPVDYPAAFLNRRSHGILLDEPATHHNLFGSPVQRVPSEATGLGSVGQGSM 60

Query: 61  GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRT 120
            G G  +R  FG   +GG  R +  +R+P   REN S G +RR R+R  NSVLP WYPRT
Sbjct: 61  MGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENMSLGVTRRGRARASNSVLPSWYPRT 120

Query: 121 PLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPK 180
           PLRD++AVVRA+ER RAR+ E  G+  ++ P P     L+  V ++    E   S++TP 
Sbjct: 121 PLRDVSAVVRAVERRRARMGEGVGRDIET-PTPQQLGVLDSLVPLSGAQLEHDYSMVTPG 180

Query: 181 PTVG----------KVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKR 240
           P+VG          KV +IL  I  ENT   + LTPQKKLLNSIDKVEKVVMEE+QK+K 
Sbjct: 181 PSVGFKRPWPPSTAKVHQILLDITRENTGEEDALTPQKKLLNSIDKVEKVVMEEIQKMKS 240

Query: 241 TPSAKKAEREKRVRTLMSFR 250
           TPSAK+AEREKRVRTLMS R
Sbjct: 241 TPSAKRAEREKRVRTLMSMR 258

[Close]
BLAST of Cucsa.038040 vs. TrEMBL
Match: V4LQQ2_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10017150mg PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.2e-52
Identity = 133/260 (51.15%), Postives = 161/260 (61.92%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR+ER VDY   F  RRS GIL D+     +L G+P+ R          P+ P  
Sbjct: 1   MPEARDRIERPVDYPAAFLSRRSNGILHDDPVTQHSLFGSPVQRV---------PSEPVI 60

Query: 61  GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRT 120
           G GG  +R  FG   +GG  R +  +R+P   REN S G +RR R+R   SVLP WYPRT
Sbjct: 61  GRGGL-VRGNFGIRRTGGGRRGQTQFRSPQ-GRENMSLGVARRGRARASTSVLPSWYPRT 120

Query: 121 PLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPK 180
           PLRD++ VVRAIER RAR+ E  G+  ++ P P     L+  V ++    E   S++TP 
Sbjct: 121 PLRDVSGVVRAIERRRARMGEGVGRDIET-PTPQQLGVLDSLVPLSGAQLEHNYSMVTPG 180

Query: 181 PTVG----------KVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKR 240
           P+VG          KV KIL  I  ENT   E LTPQKKLLNSIDKVEKVVMEE+QK+K 
Sbjct: 181 PSVGFKRPWPPSAAKVHKILLDITRENTGEEESLTPQKKLLNSIDKVEKVVMEEIQKMKS 240

Query: 241 TPSAKKAEREKRVRTLMSFR 250
           TPSAK+AEREKRVRTLMS R
Sbjct: 241 TPSAKRAEREKRVRTLMSMR 248

[Close]
BLAST of Cucsa.038040 vs. TrEMBL
Match: R0HDW2_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10023892mg PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.2e-52
Identity = 129/260 (49.62%), Postives = 159/260 (61.15%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR+ER VDY   F  RRS G+L DE     +L G+P+ R     T          
Sbjct: 1   MPEARDRIERPVDYPAAFLNRRSNGVLLDEPATQHSLFGSPVQRVPPEATGLGSIGQGSM 60

Query: 61  GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRT 120
            G G  +R  FG   +GG  R +  +R+P   REN S G +RR R+R   SVLP WYPRT
Sbjct: 61  TGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENTSLGVTRRGRARAATSVLPSWYPRT 120

Query: 121 PLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPK 180
           PLRD+++VVRAIER RAR+ E  G+  ++ P P     L+  V ++    E   S++TP 
Sbjct: 121 PLRDVSSVVRAIERRRARMGEGVGRDIET-PTPQQLGVLDSLVPLSGAQLEHDYSMVTPG 180

Query: 181 PTVG----------KVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKR 240
           P+VG          KV +IL  I  ENT   + LTPQKKLLNSIDKVEKVVMEE+QK+K 
Sbjct: 181 PSVGFKRPWPPSTAKVHQILLDITRENTGEEDALTPQKKLLNSIDKVEKVVMEEIQKMKS 240

Query: 241 TPSAKKAEREKRVRTLMSFR 250
           TPSAK+AEREKRVRTLMS R
Sbjct: 241 TPSAKRAEREKRVRTLMSMR 258

[Close]
BLAST of Cucsa.038040 vs. TAIR10
Match: AT2G42260.1 (AT2G42260.1 uv-b-insensitive 4)

HSP 1 Score: 222.6 bits (566), Expect = 2.7e-58
Identity = 135/261 (51.72%), Postives = 164/261 (62.84%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR+ERQVDY   F  RRS GIL DE     NL G+P+ R  +  T        G 
Sbjct: 1   MPEARDRIERQVDYPAAFLNRRSHGILLDEPATQHNLFGSPVQRVPSEATGGLGSIGQGS 60

Query: 61  -GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPR 120
             G G  +R  FG   +GG  R +  +R+P   REN S G +RR R+R  NSVLP WYPR
Sbjct: 61  MTGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENMSLGVTRRGRARASNSVLPSWYPR 120

Query: 121 TPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTP 180
           TPLRDI+AVVRAIER RAR+ E  G+  ++ P P     L+  V ++  H E   S++TP
Sbjct: 121 TPLRDISAVVRAIERRRARMGEGVGRDIET-PTPQQLGVLDSLVPLSGAHLEHDYSMVTP 180

Query: 181 KPTVG----------KVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLK 240
            P++G          KV +IL  I  ENT   + LTP+KKLLNSIDKVEKVVMEE+QK+K
Sbjct: 181 GPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQKMK 240

Query: 241 RTPSAKKAEREKRVRTLMSFR 250
            TPSAK+AEREKRVRTLMS R
Sbjct: 241 STPSAKRAEREKRVRTLMSMR 259

[Close]
BLAST of Cucsa.038040 vs. TAIR10
Match: AT3G57860.1 (AT3G57860.1 UV-B-insensitive 4-like)

HSP 1 Score: 161.0 bits (406), Expect = 9.5e-40
Identity = 116/266 (43.61%), Postives = 143/266 (53.76%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSEGIL-DEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60
           M EARDR ER VDY+ +FA RR  GIL DE +   +LI +P+            P     
Sbjct: 1   MPEARDRTERPVDYSTIFANRRRHGILLDEPDSRLSLIESPV-----------NPDIGSI 60

Query: 61  GGGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRT 120
           GG G  +R  F +   G        +R P   REN    ++RR R  G   +LP WYPRT
Sbjct: 61  GGTGGLVRGNFTTWRPGNGRGGHTPFRLPQ-GRENMPIVTARRGRGGG---LLPSWYPRT 120

Query: 121 PLRDITAVVRAIERTRARLRENEGQGSDSS-----PAPSDERALEYSVSVASDHQEPIIS 180
           PLRDIT +VRAIER     R   G G D       P       LE  V ++ +H+    S
Sbjct: 121 PLRDITHIVRAIER-----RRGAGTGGDDGRVIEIPTHRQVGVLESPVPLSGEHK---CS 180

Query: 181 LLTPKPTVG----------KVPKILRGIANENTVG-AEILTPQKKLLNSIDKVEKVVMEE 240
           ++TP P+VG          KV K+L  I  E     A  +TP+KKLLNSIDKVEK+VM E
Sbjct: 181 MVTPGPSVGFKRSCPPSTAKVQKMLLDITKEIAEEEAGFITPEKKLLNSIDKVEKIVMAE 240

Query: 241 LQKLKRTPSAKKAEREKRVRTLMSFR 250
           +QKLK TP AK+ EREKRVRTLM+ R
Sbjct: 241 IQKLKSTPQAKREEREKRVRTLMTMR 243

[Close]
BLAST of Cucsa.038040 vs. NCBI nr
Match: gi|449464890|ref|XP_004150162.1| (PREDICTED: protein POLYCHOME [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 2.1e-134
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 60
           MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG
Sbjct: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 60

Query: 61  GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120
           GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP
Sbjct: 61  GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180
           LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP
Sbjct: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180

Query: 181 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240
           TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK
Sbjct: 181 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240

Query: 241 RVRTLMSFR 250
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 249

[Close]
BLAST of Cucsa.038040 vs. NCBI nr
Match: gi|700198666|gb|KGN53824.1| (hypothetical protein Csa_4G152290 [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 2.1e-134
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 60
           MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG
Sbjct: 65  MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 124

Query: 61  GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120
           GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP
Sbjct: 125 GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 184

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180
           LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP
Sbjct: 185 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 244

Query: 181 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240
           TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK
Sbjct: 245 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 304

Query: 241 RVRTLMSFR 250
           RVRTLMSFR
Sbjct: 305 RVRTLMSFR 313

[Close]
BLAST of Cucsa.038040 vs. NCBI nr
Match: gi|659121757|ref|XP_008460799.1| (PREDICTED: protein POLYCHOME [Cucumis melo])

HSP 1 Score: 478.8 bits (1231), Expect = 5.8e-132
Identity = 245/249 (98.39%), Postives = 245/249 (98.39%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGPG 60
           MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTT  AQQRPTNPGPG
Sbjct: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTTAAQQRPTNPGPG 60

Query: 61  GGGTNLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120
           GGG NLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP
Sbjct: 61  GGGANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPRTP 120

Query: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180
           LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP
Sbjct: 121 LRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTPKP 180

Query: 181 TVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240
           TVGKVPKILRGIANENTVGAE LTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK
Sbjct: 181 TVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKAEREK 240

Query: 241 RVRTLMSFR 250
           RVRTLMSFR
Sbjct: 241 RVRTLMSFR 249

[Close]
BLAST of Cucsa.038040 vs. NCBI nr
Match: gi|225441692|ref|XP_002277253.1| (PREDICTED: protein POLYCHOME [Vitis vinifera])

HSP 1 Score: 227.6 bits (579), Expect = 2.3e-56
Identity = 147/267 (55.06%), Postives = 169/267 (63.30%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSE--GIL-DEQEMGSNLIGTPIARATTTNTAQ---QRP 60
           M E+RDRL R  D AE+F RRRS   GIL D  E  SNL  +P  R TTT T     +  
Sbjct: 1   MPESRDRLSRPEDIAELFLRRRSGILGILADGSERSSNLFASPSRRETTTRTTTLGARGA 60

Query: 61  TNPGPGGGGTNLRRTFGSP-ISGGIGRNRFLYRTPVLSREN-PSAGSSRRSRSRGRNSVL 120
           T      GG   R  FG+P I  G GR R +YR+P+  REN P+ GS RR R R  NSVL
Sbjct: 61  TGILASRGGGVGRGGFGTPRIGTGRGRGRAVYRSPLFGRENTPATGSGRRGRGRSGNSVL 120

Query: 121 PIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQ-EP 180
           P WYPRTPLRDIT VVRAIER RARLRE +GQ  D  P P D   +   +   S  Q E 
Sbjct: 121 PSWYPRTPLRDITHVVRAIERRRARLREIDGQQIDI-PIPQDISDVHDPILPPSSAQLEQ 180

Query: 181 IISLLTPKPT---------VGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVME 240
            IS+++P PT         VGKVPKIL  I ++   G++ LTPQKKLLNSID VEK VM+
Sbjct: 181 DISMISPSPTSGMKLVPKAVGKVPKILLDITDQTGGGSDFLTPQKKLLNSIDTVEKAVMD 240

Query: 241 ELQKLKRTPSAKKAEREKRVRTLMSFR 250
           EL KLKRTPSAK+AE+EKRVRTLMS R
Sbjct: 241 ELGKLKRTPSAKRAEQEKRVRTLMSMR 266

[Close]
BLAST of Cucsa.038040 vs. NCBI nr
Match: gi|1009106074|ref|XP_015868489.1| (PREDICTED: protein POLYCHOME-like [Ziziphus jujuba])

HSP 1 Score: 224.9 bits (572), Expect = 1.5e-55
Identity = 140/260 (53.85%), Postives = 167/260 (64.23%), Query Frame = 1 

Query: 1   MSEARDRLERQVDYAEVFARRRSEGILDEQEMGSNLIGTPIARATTTNTA-QQRPTNPGP 60
           M E RDRL R VD A VF R RS G+++E +  S+L G+P+ + TT  T   +R T  G 
Sbjct: 1   MPEPRDRLSRPVDVAAVFVRWRSRGVVNESDAASDLFGSPMRQQTTATTPIARRVTGFGA 60

Query: 61  GGGGTNLRRTFGSPIS-GGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWYPR 120
             GG   R  FG+P +    GRNR    +   +REN  AG++RR R R  NSVLP WYPR
Sbjct: 61  TRGGGFGRGIFGTPRTVNRRGRNR--PGSSSAARENTPAGTARRGRGRVTNSVLPSWYPR 120

Query: 121 TPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLLTP 180
           TPLRDITA+V AIER RARLR +EG   ++ P   D   L+  VSV+    E  I + +P
Sbjct: 121 TPLRDITAIVTAIERRRARLRGDEGLQVET-PIYQDPGVLDPPVSVSPAPLEQDIPIASP 180

Query: 181 K---------PTVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKR 240
                     P+VGKVPKIL GI N+ T  +E LTPQKKLLN+ID VEK V EELQKLKR
Sbjct: 181 STAVRKKGCPPSVGKVPKILLGITNQTTGESECLTPQKKLLNNIDTVEKAVKEELQKLKR 240

Query: 241 TPSAKKAEREKRVRTLMSFR 250
           TPSAKKAEREKRVRTLMS R
Sbjct: 241 TPSAKKAEREKRVRTLMSMR 257

The following BLAST results are available for this feature:
BLAST of Cucsa.038040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PYM_ARATH4.7e-5751.72Protein POLYCHOME OS=Arabidopsis thaliana GN=PYM PE=1 SV=1[more]
GIG1_ARATH1.7e-3843.61Protein GIGAS CELL1 OS=Arabidopsis thaliana GN=GIG1 PE=1 SV=1[more]
BLAST of Cucsa.038040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY99_CUCSA1.5e-134100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152290 PE=4 SV=1[more]
F6HL68_VITVI1.6e-5655.06Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07790 PE=4 SV=... [more]
D7LI35_ARALL7.6e-5450.77Polychome, UV-B-insensitive 4 OS=Arabidopsis lyrata subsp. lyrata GN=UVI4 PE=4 S... [more]
V4LQQ2_EUTSA3.2e-5251.15Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10017150mg PE=4 SV=1[more]
R0HDW2_9BRAS4.2e-5249.62Uncharacterized protein OS=Capsella rubella GN=CARUB_v10023892mg PE=4 SV=1[more]
BLAST of Cucsa.038040 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G42260.12.7e-5851.72 uv-b-insensitive 4[more]
AT3G57860.19.5e-4043.61 UV-B-insensitive 4-like[more]
BLAST of Cucsa.038040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464890|ref|XP_004150162.1|2.1e-134100.00PREDICTED: protein POLYCHOME [Cucumis sativus][more]
gi|700198666|gb|KGN53824.1|2.1e-134100.00hypothetical protein Csa_4G152290 [Cucumis sativus][more]
gi|659121757|ref|XP_008460799.1|5.8e-13298.39PREDICTED: protein POLYCHOME [Cucumis melo][more]
gi|225441692|ref|XP_002277253.1|2.3e-5655.06PREDICTED: protein POLYCHOME [Vitis vinifera][more]
gi|1009106074|ref|XP_015868489.1|1.5e-5553.85PREDICTED: protein POLYCHOME-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.038040.1Cucsa.038040.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 121..141
scor
NoneNo IPR availablePANTHERPTHR35119FAMILY NOT NAMEDcoord: 1..33
score: 8.4E-46coord: 70..249
score: 8.4
NoneNo IPR availablePANTHERPTHR35119:SF1PROTEIN GIGAS CELL1-RELATEDcoord: 70..249
score: 8.4E-46coord: 1..33
score: 8.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.038040Csa4G152290Cucumber (Chinese Long) v2cgycuB011
Cucsa.038040MELO3C023180Melon (DHL92) v3.5.1cgymeB011
Cucsa.038040ClCG04G000340Watermelon (Charleston Gray)cgywcgB013
Cucsa.038040CSPI04G10380Wild cucumber (PI 183967)cgycpiB011
Cucsa.038040Lsi01G018920Bottle gourd (USVL1VR-Ls)cgylsiB012
Cucsa.038040MELO3C023180.2Melon (DHL92) v3.6.1cgymedB013
Cucsa.038040CsaV3_4G010540Cucumber (Chinese Long) v3cgycucB014
Cucsa.038040Cla97C04G068720Watermelon (97103) v2cgywmbB013
Cucsa.038040Bhi03G002127Wax gourdcgywgoB013
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None