CmoCh07G013590 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G013590
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	uv-b-insensitive 4
Location	Cmo_Chr07 : 7688045 .. 7690601 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGAATCAAGGGATAGATTGGAGAGGCAAGTGGACTATGCCGAGGTCTTTGCTCGTCGGAGATCAGAAGGCGGTATATTGGACGAGCAAGAAATGAGTACTACTTTGATCGGGACTCCGATCGCACGCGCCACAACGACGACTACAGCTCAACAAAGACCTACGAATCTCGGGCCTGGAGGTGGTGGTGGTGGTGGTGCGATTCCGAGACGCAGTTTTGGTTCTCCCATTTCTGGTGGAATTGGACGTAATAGATTTCTTTACAGATCTCCAGTTTTGAGCCGCGAGAATACGGCGGCTGGGAGTTCCAGACGGAGTAGATCCCGGGTGAGGCATAGTGTTTTGCCGATTTGGTATCCAAGAACTCCACTCCGCGACATTACTGCAGTTGTGAGGGTAAATGACTAACTCTCCTCTTATTTTGATTCTGCTCTGCTAGATCTTTCAAGTGTTCGTTGTGTTCTGCATTCAATTTGTGGAGTATCTGCACATAGCATCTATTGAAATTTCTCTACTTATTGCATTTGAACTGGTGAATTTGATTCATATGAGTTCTGTTAAATTCACTCATTGTCATTGCATCTCTCTCTCTCTGGTATTCATATACACCAATATCTTGAGATATCTGTTCTCTAATACTGTATGCTTGTTTGTTTAGATTCATTCTAATTTGAAGTTGCTTGAACTTTCGGAAACCCTCTTGATTTTTTTTTTCTGTAGTTGTGATCTTGTTTCTGTTTTTCAGTTGGTAGGATTTGATTTGATTTGAGTTGAGCTGACTTTTAATCGGAAATGTTAATTTCATATGTCCAATCCATTTTTGTGAATCCTGAGATCGGATTACTTTCCTTACCCTTTAAGTTAATTAATTAATATATTTCCAGTTCTTAATCAGATTGACTACCGACTTGTTTGTCTAAAAAGAAGATTCTCTTTGTTTTGTAACGTCCATGCTCAATGATTCCTTATGTAACATCAACAGTCTTGATAATGGTATCCTGTCAACCATTTACTTGTTAGTTTGTCACGTAATTCTTCTCCTTGTTAGTTTGTTTCTTTATTATTTTATTTTTATTCAAATTGTTTTCTAGGCTTTGTTTTAACCTATTATTTGAACTACTTTTTGGTGGGCTCACCATGCTTCGGCTGATTGCAGTGCATATTAGCACAAGATAATATCATTACTTGTGGGACATGTTTTCAACGCTTCTAACGCGTTTGAATTAATAGACACTTGTACTAACGTTTTCGATGTGTTCATATATTTATGTTGTTATTAATGAACAAAAAAATTAATTAATTTTGATTGTGACAAATATTTTACATTTTCAAGCCTCTAGGTACATGTACATTATTGACTTATCTATGTCACGTGATTGTGTCTATGCATCATTCATCTCAAATCTTTGCTACTTTTGAAGTTGGTTCCCTGATATTTTTGCTGTCAATTTGAGAAATTTCAACATTTTTCACGTTTTCAAGGATTTTATTTGATGAGAACTTCTATTAGAAGTCTTTATTGAGCAATGTCATTGTGAATTCTCTTTATAAAATTGCATATGGACTCAAGTTTTTGGGCTAATTCTTCACATTCCTGTTTCATGTGTTCAACTTATTTTGATTTTTTCTGGGTATTTAGTTACTCCTCCATGTCATCCAATAGCATCTGTGTTCTTCCTAGATATCTCCTTTCCTAGTTTTCCATTTGATGCGAGGTCAACTGGGGTTATGCCATTTATAAGCATCTTCCAATAGTGTTCTTAACTTGGGGAGAATCATATTCTTAAATCAGGCAATTGAAAGAACACGAGCTCGGTTGAGAGAAAACGAAGGCCAAGGAAGTGATAATAGTCCAGCTCCCTCGGACGAAAGAGCTTTAGAGTTTAGCGCATCTGTGTCAGGTGGTCATCAAGAGCCAGACGTTTCTCTGGTCACCCCCAAACCAACCGTAGGCAAAGTTAACAAGATTCTTCGCGGAATTGCAAATGAGAATGTGGAAGAATCCGAGATGCTCACCCCACAGAAGAAACTCTTGAACTCCATCGACAAAGTGGAGAAAGTAGTGAGGGAGGAGTTGCAGAAATTGAGAAAGACACCGAGTGCAAAGAGAGCCGAGAGGGAAAAAAGAGTTCGCACTTTGATGTCATTTCGTTGATTCAGTTCAACACAGTCAGTCACTCCCAGAATTGGGGAGAACCAGATCATCATCATGTTGATCAAATTCATTCAGAACTCAGATCAATCATCTGCTGATGATTACTCGGTAAAGAGCGCTGGATGATATGATACCAGAGGGATAAAGGGAGAAGGAGAGATCCTCATCTTCTGATGAGATCCCAAGAGGACTATTATCTTACTTTCCTGTTAAATGAATCCTTTTCATTTGCTAGAACCATAATAGGTTGTTTTGTTGTTGTAGGGTCGTCTGCCCTTAAGTCTGTTTACTGCAAATATAGATAGTGAAAGTAGGCCATCTGTTTTGGGCGGTGGAAATGATGTATAGAAGAATTATTCACCAACTCTAGACTTGAATTTTTGCCTTTCAAAAATGCAC

mRNA sequence

ATGTCGGAATCAAGGGATAGATTGGAGAGGCAAGTGGACTATGCCGAGGTCTTTGCTCGTCGGAGATCAGAAGGCGGTATATTGGACGAGCAAGAAATGAGTACTACTTTGATCGGGACTCCGATCGCACGCGCCACAACGACGACTACAGCTCAACAAAGACCTACGAATCTCGGGCCTGGAGGTGGTGGTGGTGGTGGTGCGATTCCGAGACGCAGTTTTGGTTCTCCCATTTCTGGTGGAATTGGACGTAATAGATTTCTTTACAGATCTCCAGTTTTGAGCCGCGAGAATACGGCGGCTGGGAGTTCCAGACGGAGTAGATCCCGGGTGAGGCATAGTGTTTTGCCGATTTGGTATCCAAGAACTCCACTCCGCGACATTACTGCAGTTGTGAGGGCAATTGAAAGAACACGAGCTCGGTTGAGAGAAAACGAAGGCCAAGGAAGTGATAATAGTCCAGCTCCCTCGGACGAAAGAGCTTTAGAGTTTAGCGCATCTGTGTCAGGTGGTCATCAAGAGCCAGACGTTTCTCTGGTCACCCCCAAACCAACCGTAGGCAAAGTTAACAAGATTCTTCGCGGAATTGCAAATGAGAATGTGGAAGAATCCGAGATGCTCACCCCACAGAAGAAACTCTTGAACTCCATCGACAAAGTGGAGAAAGTAGTGAGGGAGGAGTTGCAGAAATTGAGAAAGACACCGAGTGCAAAGAGAGCCGAGAGGGAAAAAAGAGTTCGCACTTTGATGTCATTTCGTTGATTCAGTTCAACACAGTCAGTCACTCCCAGAATTGGGGAGAACCAGATCATCATCATGTTGATCAAATTCATTCAGAACTCAGATCAATCATCTGCTGATGATTACTCGGTAAAGAGCGCTGGATGATATGATACCAGAGGGATAAAGGGAGAAGGAGAGATCCTCATCTTCTGATGAGATCCCAAGAGGACTATTATCTTACTTTCCTGTTAAATGAATCCTTTTCATTTGCTAGAACCATAATAGGTTGTTTTGTTGTTGTAGGGTCGTCTGCCCTTAAGTCTGTTTACTGCAAATATAGATAGTGAAAGTAGGCCATCTGTTTTGGGCGGTGGAAATGATGTATAGAAGAATTATTCACCAACTCTAGACTTGAATTTTTGCCTTTCAAAAATGCAC

Coding sequence (CDS)

ATGTCGGAATCAAGGGATAGATTGGAGAGGCAAGTGGACTATGCCGAGGTCTTTGCTCGTCGGAGATCAGAAGGCGGTATATTGGACGAGCAAGAAATGAGTACTACTTTGATCGGGACTCCGATCGCACGCGCCACAACGACGACTACAGCTCAACAAAGACCTACGAATCTCGGGCCTGGAGGTGGTGGTGGTGGTGGTGCGATTCCGAGACGCAGTTTTGGTTCTCCCATTTCTGGTGGAATTGGACGTAATAGATTTCTTTACAGATCTCCAGTTTTGAGCCGCGAGAATACGGCGGCTGGGAGTTCCAGACGGAGTAGATCCCGGGTGAGGCATAGTGTTTTGCCGATTTGGTATCCAAGAACTCCACTCCGCGACATTACTGCAGTTGTGAGGGCAATTGAAAGAACACGAGCTCGGTTGAGAGAAAACGAAGGCCAAGGAAGTGATAATAGTCCAGCTCCCTCGGACGAAAGAGCTTTAGAGTTTAGCGCATCTGTGTCAGGTGGTCATCAAGAGCCAGACGTTTCTCTGGTCACCCCCAAACCAACCGTAGGCAAAGTTAACAAGATTCTTCGCGGAATTGCAAATGAGAATGTGGAAGAATCCGAGATGCTCACCCCACAGAAGAAACTCTTGAACTCCATCGACAAAGTGGAGAAAGTAGTGAGGGAGGAGTTGCAGAAATTGAGAAAGACACCGAGTGCAAAGAGAGCCGAGAGGGAAAAAAGAGTTCGCACTTTGATGTCATTTCGTTGA

Homology

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BLAST of CmoCh07G013590 vs. Swiss-Prot
Match: PYM_ARATH (Protein POLYCHOME OS=Arabidopsis thaliana GN=PYM PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.8e-54
Identity = 134/263 (50.95%), Postives = 168/263 (63.88%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60
           M E+RDR+ERQVDY   F  RRS G +LDE      L G+P+ R  +  T      ++G 
Sbjct: 1   MPEARDRIERQVDYPAAFLNRRSHGILLDEPATQHNLFGSPVQRVPSEATGGLG--SIGQ 60

Query: 61  GGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWY 120
           G   G G + R +FG   +GG  R +  +RSP   REN + G +RR R+R  +SVLP WY
Sbjct: 61  GSMTGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENMSLGVTRRGRARASNSVLPSWY 120

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLV 180
           PRTPLRDI+AVVRAIER RAR+ E  G+  + +P P     L+    +SG H E D S+V
Sbjct: 121 PRTPLRDISAVVRAIERRRARMGEGVGRDIE-TPTPQQLGVLDSLVPLSGAHLEHDYSMV 180

Query: 181 TPKPTVG----------KVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQK 240
           TP P++G          KV++IL  I  EN  E + LTP+KKLLNSIDKVEKVV EE+QK
Sbjct: 181 TPGPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQK 240

Query: 241 LRKTPSAKRAEREKRVRTLMSFR 254
           ++ TPSAKRAEREKRVRTLMS R
Sbjct: 241 MKSTPSAKRAEREKRVRTLMSMR 259

[Close]

BLAST of CmoCh07G013590 vs. Swiss-Prot
Match: GIG1_ARATH (Protein GIGAS CELL1 OS=Arabidopsis thaliana GN=GIG1 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-34
Identity = 116/269 (43.12%), Postives = 144/269 (53.53%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60
           M E+RDR ER VDY+ +FA RR  G +LDE +   +LI +P+              N   
Sbjct: 1   MPEARDRTERPVDYSTIFANRRRHGILLDEPDSRLSLIESPV--------------NPDI 60

Query: 61  GGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWY 120
           G  GG G + R +F +   G        +R P   REN    ++RR R      +LP WY
Sbjct: 61  GSIGGTGGLVRGNFTTWRPGNGRGGHTPFRLPQ-GRENMPIVTARRGRGG---GLLPSWY 120

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEFSASVSGGHQEP 180
           PRTPLRDIT +VRAIER     R   G G D+      P       LE    +SG H+  
Sbjct: 121 PRTPLRDITHIVRAIER-----RRGAGTGGDDGRVIEIPTHRQVGVLESPVPLSGEHK-- 180

Query: 181 DVSLVTPKPTVG----------KVNKILRGIANENVEESE-MLTPQKKLLNSIDKVEKVV 240
             S+VTP P+VG          KV K+L  I  E  EE    +TP+KKLLNSIDKVEK+V
Sbjct: 181 -CSMVTPGPSVGFKRSCPPSTAKVQKMLLDITKEIAEEEAGFITPEKKLLNSIDKVEKIV 240

Query: 241 REELQKLRKTPSAKRAEREKRVRTLMSFR 254
             E+QKL+ TP AKR EREKRVRTLM+ R
Sbjct: 241 MAEIQKLKSTPQAKREEREKRVRTLMTMR 243

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BLAST of CmoCh07G013590 vs. TrEMBL
Match: A0A0A0KY99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152290 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 3.3e-105
Identity = 215/253 (84.98%), Postives = 231/253 (91.30%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60
           MSE+RDRLERQVDYAEVFARRRSEG ILDEQEM + LIGTPIARATTT TAQQRPTN GP
Sbjct: 65  MSEARDRLERQVDYAEVFARRRSEG-ILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 124

Query: 61  GGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWY 120
           GGGG      RR+FGSPISGGIGRNRFLYR+PVLSREN +AGSSRRSRSR R+SVLPIWY
Sbjct: 125 GGGGTN---LRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWY 184

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLV 180
           PRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALE+S SV+  HQEP +SL+
Sbjct: 185 PRTPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLL 244

Query: 181 TPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKRA 240
           TPKPTVGKV KILRGIANEN   +E+LTPQKKLLNSIDKVEKVV EELQKL++TPSAK+A
Sbjct: 245 TPKPTVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKA 304

Query: 241 EREKRVRTLMSFR 254
           EREKRVRTLMSFR
Sbjct: 305 EREKRVRTLMSFR 313

[Close]

BLAST of CmoCh07G013590 vs. TrEMBL
Match: R0HDW2_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10023892mg PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 6.1e-51
Identity = 133/263 (50.57%), Postives = 166/263 (63.12%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60
           M E+RDR+ER VDY   F  RRS G +LDE     +L G+P+ R     T      ++G 
Sbjct: 1   MPEARDRIERPVDYPAAFLNRRSNGVLLDEPATQHSLFGSPVQRVPPEATGLG---SIGQ 60

Query: 61  GGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWY 120
           G   G G + R +FG   +GG  R +  +RSP   RENT+ G +RR R+R   SVLP WY
Sbjct: 61  GSMTGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENTSLGVTRRGRARAATSVLPSWY 120

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLV 180
           PRTPLRD+++VVRAIER RAR+ E  G+  + +P P     L+    +SG   E D S+V
Sbjct: 121 PRTPLRDVSSVVRAIERRRARMGEGVGRDIE-TPTPQQLGVLDSLVPLSGAQLEHDYSMV 180

Query: 181 TPKPTVG----------KVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQK 240
           TP P+VG          KV++IL  I  EN  E + LTPQKKLLNSIDKVEKVV EE+QK
Sbjct: 181 TPGPSVGFKRPWPPSTAKVHQILLDITRENTGEEDALTPQKKLLNSIDKVEKVVMEEIQK 240

Query: 241 LRKTPSAKRAEREKRVRTLMSFR 254
           ++ TPSAKRAEREKRVRTLMS R
Sbjct: 241 MKSTPSAKRAEREKRVRTLMSMR 258

[Close]

BLAST of CmoCh07G013590 vs. TrEMBL
Match: D7LI35_ARALL (Polychome, UV-B-insensitive 4 OS=Arabidopsis lyrata subsp. lyrata GN=UVI4 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.8e-50
Identity = 132/263 (50.19%), Postives = 166/263 (63.12%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60
           M E+RDR+ER VDY   F  RRS G +LDE      L G+P+ R  +  T      ++G 
Sbjct: 1   MPEARDRIERPVDYPAAFLNRRSHGILLDEPATHHNLFGSPVQRVPSEATGLG---SVGQ 60

Query: 61  GGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWY 120
           G   G G + R +FG   +GG  R +  +RSP   REN + G +RR R+R  +SVLP WY
Sbjct: 61  GSMMGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENMSLGVTRRGRARASNSVLPSWY 120

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLV 180
           PRTPLRD++AVVRA+ER RAR+ E  G+  + +P P     L+    +SG   E D S+V
Sbjct: 121 PRTPLRDVSAVVRAVERRRARMGEGVGRDIE-TPTPQQLGVLDSLVPLSGAQLEHDYSMV 180

Query: 181 TPKPTVG----------KVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQK 240
           TP P+VG          KV++IL  I  EN  E + LTPQKKLLNSIDKVEKVV EE+QK
Sbjct: 181 TPGPSVGFKRPWPPSTAKVHQILLDITRENTGEEDALTPQKKLLNSIDKVEKVVMEEIQK 240

Query: 241 LRKTPSAKRAEREKRVRTLMSFR 254
           ++ TPSAKRAEREKRVRTLMS R
Sbjct: 241 MKSTPSAKRAEREKRVRTLMSMR 258

[Close]

BLAST of CmoCh07G013590 vs. TrEMBL
Match: F6HL68_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07790 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.7e-50
Identity = 146/272 (53.68%), Postives = 168/272 (61.76%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSE--GGILDEQEMSTTLIGTPIARATTTTTAQQRPTNL 60
           M ESRDRL R  D AE+F RRRS   G + D  E S+ L  +P  R TTT T     T L
Sbjct: 1   MPESRDRLSRPEDIAELFLRRRSGILGILADGSERSSNLFASPSRRETTTRT-----TTL 60

Query: 61  GPGGGGG-----GGAIPRRSFGSP-ISGGIGRNRFLYRSPVLSRENT-AAGSSRRSRSRV 120
           G  G  G     GG + R  FG+P I  G GR R +YRSP+  RENT A GS RR R R 
Sbjct: 61  GARGATGILASRGGGVGRGGFGTPRIGTGRGRGRAVYRSPLFGRENTPATGSGRRGRGRS 120

Query: 121 RHSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSA-SVSG 180
            +SVLP WYPRTPLRDIT VVRAIER RARLRE +GQ  D  P P D   +       S 
Sbjct: 121 GNSVLPSWYPRTPLRDITHVVRAIERRRARLREIDGQQID-IPIPQDISDVHDPILPPSS 180

Query: 181 GHQEPDVSLVTPKPT---------VGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVE 240
              E D+S+++P PT         VGKV KIL  I ++    S+ LTPQKKLLNSID VE
Sbjct: 181 AQLEQDISMISPSPTSGMKLVPKAVGKVPKILLDITDQTGGGSDFLTPQKKLLNSIDTVE 240

Query: 241 KVVREELQKLRKTPSAKRAEREKRVRTLMSFR 254
           K V +EL KL++TPSAKRAE+EKRVRTLMS R
Sbjct: 241 KAVMDELGKLKRTPSAKRAEQEKRVRTLMSMR 266

[Close]

BLAST of CmoCh07G013590 vs. TrEMBL
Match: V4LQQ2_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10017150mg PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.1e-47
Identity = 128/263 (48.67%), Postives = 159/263 (60.46%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60
           M E+RDR+ER VDY   F  RRS G + D+     +L G+P+ R  +             
Sbjct: 1   MPEARDRIERPVDYPAAFLSRRSNGILHDDPVTQHSLFGSPVQRVPSEPVI--------- 60

Query: 61  GGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWY 120
               G G + R +FG   +GG  R +  +RSP   REN + G +RR R+R   SVLP WY
Sbjct: 61  ----GRGGLVRGNFGIRRTGGGRRGQTQFRSPQ-GRENMSLGVARRGRARASTSVLPSWY 120

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLV 180
           PRTPLRD++ VVRAIER RAR+ E  G+  + +P P     L+    +SG   E + S+V
Sbjct: 121 PRTPLRDVSGVVRAIERRRARMGEGVGRDIE-TPTPQQLGVLDSLVPLSGAQLEHNYSMV 180

Query: 181 TPKPTVG----------KVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQK 240
           TP P+VG          KV+KIL  I  EN  E E LTPQKKLLNSIDKVEKVV EE+QK
Sbjct: 181 TPGPSVGFKRPWPPSAAKVHKILLDITRENTGEEESLTPQKKLLNSIDKVEKVVMEEIQK 240

Query: 241 LRKTPSAKRAEREKRVRTLMSFR 254
           ++ TPSAKRAEREKRVRTLMS R
Sbjct: 241 MKSTPSAKRAEREKRVRTLMSMR 248

[Close]

BLAST of CmoCh07G013590 vs. TAIR10
Match: AT2G42260.1 (AT2G42260.1 uv-b-insensitive 4)

HSP 1 Score: 213.0 bits (541), Expect = 2.1e-55
Identity = 134/263 (50.95%), Postives = 168/263 (63.88%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60
           M E+RDR+ERQVDY   F  RRS G +LDE      L G+P+ R  +  T      ++G 
Sbjct: 1   MPEARDRIERQVDYPAAFLNRRSHGILLDEPATQHNLFGSPVQRVPSEATGGLG--SIGQ 60

Query: 61  GGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWY 120
           G   G G + R +FG   +GG  R +  +RSP   REN + G +RR R+R  +SVLP WY
Sbjct: 61  GSMTGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENMSLGVTRRGRARASNSVLPSWY 120

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLV 180
           PRTPLRDI+AVVRAIER RAR+ E  G+  + +P P     L+    +SG H E D S+V
Sbjct: 121 PRTPLRDISAVVRAIERRRARMGEGVGRDIE-TPTPQQLGVLDSLVPLSGAHLEHDYSMV 180

Query: 181 TPKPTVG----------KVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQK 240
           TP P++G          KV++IL  I  EN  E + LTP+KKLLNSIDKVEKVV EE+QK
Sbjct: 181 TPGPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQK 240

Query: 241 LRKTPSAKRAEREKRVRTLMSFR 254
           ++ TPSAKRAEREKRVRTLMS R
Sbjct: 241 MKSTPSAKRAEREKRVRTLMSMR 259

[Close]

BLAST of CmoCh07G013590 vs. TAIR10
Match: AT3G57860.1 (AT3G57860.1 UV-B-insensitive 4-like)

HSP 1 Score: 147.5 bits (371), Expect = 1.1e-35
Identity = 116/269 (43.12%), Postives = 144/269 (53.53%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60
           M E+RDR ER VDY+ +FA RR  G +LDE +   +LI +P+              N   
Sbjct: 1   MPEARDRTERPVDYSTIFANRRRHGILLDEPDSRLSLIESPV--------------NPDI 60

Query: 61  GGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWY 120
           G  GG G + R +F +   G        +R P   REN    ++RR R      +LP WY
Sbjct: 61  GSIGGTGGLVRGNFTTWRPGNGRGGHTPFRLPQ-GRENMPIVTARRGRGG---GLLPSWY 120

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEFSASVSGGHQEP 180
           PRTPLRDIT +VRAIER     R   G G D+      P       LE    +SG H+  
Sbjct: 121 PRTPLRDITHIVRAIER-----RRGAGTGGDDGRVIEIPTHRQVGVLESPVPLSGEHK-- 180

Query: 181 DVSLVTPKPTVG----------KVNKILRGIANENVEESE-MLTPQKKLLNSIDKVEKVV 240
             S+VTP P+VG          KV K+L  I  E  EE    +TP+KKLLNSIDKVEK+V
Sbjct: 181 -CSMVTPGPSVGFKRSCPPSTAKVQKMLLDITKEIAEEEAGFITPEKKLLNSIDKVEKIV 240

Query: 241 REELQKLRKTPSAKRAEREKRVRTLMSFR 254
             E+QKL+ TP AKR EREKRVRTLM+ R
Sbjct: 241 MAEIQKLKSTPQAKREEREKRVRTLMTMR 243

[Close]

BLAST of CmoCh07G013590 vs. NCBI nr
Match: gi|659121757|ref|XP_008460799.1| (PREDICTED: protein POLYCHOME [Cucumis melo])

HSP 1 Score: 391.7 bits (1005), Expect = 9.5e-106
Identity = 216/253 (85.38%), Postives = 231/253 (91.30%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60
           MSE+RDRLERQVDYAEVFARRRSEG ILDEQEM + LIGTPIARATTTT AQQRPTN GP
Sbjct: 1   MSEARDRLERQVDYAEVFARRRSEG-ILDEQEMGSNLIGTPIARATTTTAAQQRPTNPGP 60

Query: 61  GGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWY 120
           GGGG   A  RR+FGSPISGGIGRNRFLYR+PVLSREN +AGSSRRSRSR R+SVLPIWY
Sbjct: 61  GGGG---ANLRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWY 120

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLV 180
           PRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALE+S SV+  HQEP +SL+
Sbjct: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLL 180

Query: 181 TPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKRA 240
           TPKPTVGKV KILRGIANEN   +E LTPQKKLLNSIDKVEKVV EELQKL++TPSAK+A
Sbjct: 181 TPKPTVGKVPKILRGIANENTVGAETLTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKA 240

Query: 241 EREKRVRTLMSFR 254
           EREKRVRTLMSFR
Sbjct: 241 EREKRVRTLMSFR 249

[Close]

BLAST of CmoCh07G013590 vs. NCBI nr
Match: gi|449464890|ref|XP_004150162.1| (PREDICTED: protein POLYCHOME [Cucumis sativus])

HSP 1 Score: 389.4 bits (999), Expect = 4.7e-105
Identity = 215/253 (84.98%), Postives = 231/253 (91.30%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60
           MSE+RDRLERQVDYAEVFARRRSEG ILDEQEM + LIGTPIARATTT TAQQRPTN GP
Sbjct: 1   MSEARDRLERQVDYAEVFARRRSEG-ILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 60

Query: 61  GGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWY 120
           GGGG      RR+FGSPISGGIGRNRFLYR+PVLSREN +AGSSRRSRSR R+SVLPIWY
Sbjct: 61  GGGGTN---LRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWY 120

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLV 180
           PRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALE+S SV+  HQEP +SL+
Sbjct: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLL 180

Query: 181 TPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKRA 240
           TPKPTVGKV KILRGIANEN   +E+LTPQKKLLNSIDKVEKVV EELQKL++TPSAK+A
Sbjct: 181 TPKPTVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKA 240

Query: 241 EREKRVRTLMSFR 254
           EREKRVRTLMSFR
Sbjct: 241 EREKRVRTLMSFR 249

[Close]

BLAST of CmoCh07G013590 vs. NCBI nr
Match: gi|700198666|gb|KGN53824.1| (hypothetical protein Csa_4G152290 [Cucumis sativus])

HSP 1 Score: 389.4 bits (999), Expect = 4.7e-105
Identity = 215/253 (84.98%), Postives = 231/253 (91.30%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60
           MSE+RDRLERQVDYAEVFARRRSEG ILDEQEM + LIGTPIARATTT TAQQRPTN GP
Sbjct: 65  MSEARDRLERQVDYAEVFARRRSEG-ILDEQEMGSNLIGTPIARATTTNTAQQRPTNPGP 124

Query: 61  GGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWY 120
           GGGG      RR+FGSPISGGIGRNRFLYR+PVLSREN +AGSSRRSRSR R+SVLPIWY
Sbjct: 125 GGGGTN---LRRTFGSPISGGIGRNRFLYRTPVLSRENPSAGSSRRSRSRGRNSVLPIWY 184

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLV 180
           PRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALE+S SV+  HQEP +SL+
Sbjct: 185 PRTPLRDITAVVRAIERTRARLRENEGQGSDSSPAPSDERALEYSVSVASDHQEPIISLL 244

Query: 181 TPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKRA 240
           TPKPTVGKV KILRGIANEN   +E+LTPQKKLLNSIDKVEKVV EELQKL++TPSAK+A
Sbjct: 245 TPKPTVGKVPKILRGIANENTVGAEILTPQKKLLNSIDKVEKVVMEELQKLKRTPSAKKA 304

Query: 241 EREKRVRTLMSFR 254
           EREKRVRTLMSFR
Sbjct: 305 EREKRVRTLMSFR 313

[Close]

BLAST of CmoCh07G013590 vs. NCBI nr
Match: gi|15227912|ref|NP_181755.1| (protein POLYCHOME [Arabidopsis thaliana])

HSP 1 Score: 213.0 bits (541), Expect = 6.0e-52
Identity = 134/263 (50.95%), Postives = 168/263 (63.88%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60
           M E+RDR+ERQVDY   F  RRS G +LDE      L G+P+ R  +  T      ++G 
Sbjct: 1   MPEARDRIERQVDYPAAFLNRRSHGILLDEPATQHNLFGSPVQRVPSEATGGLG--SIGQ 60

Query: 61  GGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWY 120
           G   G G + R +FG   +GG  R +  +RSP   REN + G +RR R+R  +SVLP WY
Sbjct: 61  GSMTGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENMSLGVTRRGRARASNSVLPSWY 120

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLV 180
           PRTPLRDI+AVVRAIER RAR+ E  G+  + +P P     L+    +SG H E D S+V
Sbjct: 121 PRTPLRDISAVVRAIERRRARMGEGVGRDIE-TPTPQQLGVLDSLVPLSGAHLEHDYSMV 180

Query: 181 TPKPTVG----------KVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQK 240
           TP P++G          KV++IL  I  EN  E + LTP+KKLLNSIDKVEKVV EE+QK
Sbjct: 181 TPGPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQK 240

Query: 241 LRKTPSAKRAEREKRVRTLMSFR 254
           ++ TPSAKRAEREKRVRTLMS R
Sbjct: 241 MKSTPSAKRAEREKRVRTLMSMR 259

[Close]

BLAST of CmoCh07G013590 vs. NCBI nr
Match: gi|565474400|ref|XP_006294841.1| (hypothetical protein CARUB_v10023892mg [Capsella rubella])

HSP 1 Score: 209.1 bits (531), Expect = 8.7e-51
Identity = 133/263 (50.57%), Postives = 166/263 (63.12%), Query Frame = 1


Query: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60
           M E+RDR+ER VDY   F  RRS G +LDE     +L G+P+ R     T      ++G 
Sbjct: 1   MPEARDRIERPVDYPAAFLNRRSNGVLLDEPATQHSLFGSPVQRVPPEATGLG---SIGQ 60

Query: 61  GGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWY 120
           G   G G + R +FG   +GG  R +  +RSP   RENT+ G +RR R+R   SVLP WY
Sbjct: 61  GSMTGRGGLVRGNFGIRRTGGGRRGQIQFRSPQ-GRENTSLGVTRRGRARAATSVLPSWY 120

Query: 121 PRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLV 180
           PRTPLRD+++VVRAIER RAR+ E  G+  + +P P     L+    +SG   E D S+V
Sbjct: 121 PRTPLRDVSSVVRAIERRRARMGEGVGRDIE-TPTPQQLGVLDSLVPLSGAQLEHDYSMV 180

Query: 181 TPKPTVG----------KVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQK 240
           TP P+VG          KV++IL  I  EN  E + LTPQKKLLNSIDKVEKVV EE+QK
Sbjct: 181 TPGPSVGFKRPWPPSTAKVHQILLDITRENTGEEDALTPQKKLLNSIDKVEKVVMEEIQK 240

Query: 241 LRKTPSAKRAEREKRVRTLMSFR 254
           ++ TPSAKRAEREKRVRTLMS R
Sbjct: 241 MKSTPSAKRAEREKRVRTLMSMR 258

The following BLAST results are available for this feature:

BLAST of CmoCh07G013590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PYM_ARATH	3.8e-54	50.95	Protein POLYCHOME OS=Arabidopsis thaliana GN=PYM PE=1 SV=1	[more]
GIG1_ARATH	2.0e-34	43.12	Protein GIGAS CELL1 OS=Arabidopsis thaliana GN=GIG1 PE=1 SV=1	[more]

BLAST of CmoCh07G013590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY99_CUCSA	3.3e-105	84.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G152290 PE=4 SV=1	[more]
R0HDW2_9BRAS	6.1e-51	50.57	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10023892mg PE=4 SV=1	[more]
D7LI35_ARALL	1.8e-50	50.19	Polychome, UV-B-insensitive 4 OS=Arabidopsis lyrata subsp. lyrata GN=UVI4 PE=4 S...	[more]
F6HL68_VITVI	6.7e-50	53.68	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07790 PE=4 SV=...	[more]
V4LQQ2_EUTSA	4.1e-47	48.67	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10017150mg PE=4 SV=1	[more]

BLAST of CmoCh07G013590 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42260.1	2.1e-55	50.95	uv-b-insensitive 4	[more]
AT3G57860.1	1.1e-35	43.12	UV-B-insensitive 4-like	[more]

BLAST of CmoCh07G013590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121757\|ref\|XP_008460799.1\|	9.5e-106	85.38	PREDICTED: protein POLYCHOME [Cucumis melo]	[more]
gi\|449464890\|ref\|XP_004150162.1\|	4.7e-105	84.98	PREDICTED: protein POLYCHOME [Cucumis sativus]	[more]
gi\|700198666\|gb\|KGN53824.1\|	4.7e-105	84.98	hypothetical protein Csa_4G152290 [Cucumis sativus]	[more]
gi\|15227912\|ref\|NP_181755.1\|	6.0e-52	50.95	protein POLYCHOME [Arabidopsis thaliana]	[more]
gi\|565474400\|ref\|XP_006294841.1\|	8.7e-51	50.57	hypothetical protein CARUB_v10023892mg [Capsella rubella]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:1904667	negative regulation of ubiquitin protein ligase activity
biological_process	GO:0051783	regulation of nuclear division
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G013590.1	CmoCh07G013590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 125..145 scor
None	No IPR available	PANTHER	PTHR35119	FAMILY NOT NAMED	coord: 1..33 score: 6.5E-45coord: 74..253 score: 6.5
None	No IPR available	PANTHER	PTHR35119:SF1	PROTEIN GIGAS CELL1-RELATED	coord: 1..33 score: 6.5E-45coord: 74..253 score: 6.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G013590	CmaCh03G000790	Cucurbita maxima (Rimu)	cmacmoB674
CmoCh07G013590	CmaCh07G013150	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G013590	Cla000743	Watermelon (97103) v1	cmowmB819
CmoCh07G013590	MELO3C023180	Melon (DHL92) v3.5.1	cmomeB792
CmoCh07G013590	Lsi01G018920	Bottle gourd (USVL1VR-Ls)	cmolsiB778
CmoCh07G013590	Cp4.1LG19g00650	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G013590	Cp4.1LG10g11700	Cucurbita pepo (Zucchini)	cmocpeB803
CmoCh07G013590	MELO3C023180.2	Melon (DHL92) v3.6.1	cmomedB899
CmoCh07G013590	Bhi03G002127	Wax gourd	cmowgoB1068
CmoCh07G013590	Carg22466	Silver-seed gourd	carcmoB0275
CmoCh07G013590	Carg12737	Silver-seed gourd	carcmoB0395

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G013590	CmoCh03G000800	Cucurbita moschata (Rifu)	cmocmoB461

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G013590	Cucumber (Chinese Long) v3	cmocucB1008
CmoCh07G013590	Watermelon (97103) v2	cmowmbB869
CmoCh07G013590	Wax gourd	cmowgoB1061
CmoCh07G013590	Wild cucumber (PI 183967)	cmocpiB865
CmoCh07G013590	Cucumber (Chinese Long) v2	cmocuB857
CmoCh07G013590	Melon (DHL92) v3.5.1	cmomeB794
CmoCh07G013590	Watermelon (Charleston Gray)	cmowcgB771
CmoCh07G013590	Watermelon (97103) v1	cmowmB829
CmoCh07G013590	Bottle gourd (USVL1VR-Ls)	cmolsiB780
CmoCh07G013590	Cucumber (Gy14) v2	cgybcmoB546
CmoCh07G013590	Melon (DHL92) v3.6.1	cmomedB898