MELO3C020263.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020263.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Calcium binding protein
Location	chr06 : 15381310 .. 15382407 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAGAAAAAGAAAAGGATATCTCTCTCTATTCAAATTTCAAATCCCCTTCACATCATCACAATCAATCCCATGGCCAATAACAACCCCTCCCTTTCTATTTCAACTCCTGGATCTTCCTCCTTAGGCTCCATGGACGAAGTCATCAGAGTCTTCAACAAATTCGACAAGAACGGCGACGGCAAGATTTCCGTCTCAGAACTCGGCGCTGCTCTCGGTGAACTCAGCGGCAACATCTCCACCGGCGAGATCCACCGCATTATGTCCGAGATCGACAAGGACGGTGACGGTTTCATCGACCTCGACGAGTTCACCGACTTCACCTCCTCTTCCACTGGTGGTAACAAAGATCTGCAGGACGCTTTCGATCTCTACGATATTGATAAGAACGGCTTAATCTCTGCCAAGGAGTTGCACTCTGTTCTCAAACGCCTTGGTGAAAAATGTAGCCTCAAAGATTGTTGCCGGATGATCAGTTCTGTTGATGTTGACGGTGATGGACATGTAAATTTCGAGGAATTCAAGAAGATGATGACGAGATCTTAGTCTTCTTCGCCAGTAGAGAGGTAGTTTCACAAATTTAATCAAATTTAGGCTTAGAATTTCAAAACCAAAATCGAGTGTTATCAGTTGATTCTTAGTGTGTACAGTCTAGAATCTATCGTTTCTTTCACGGTTTGTAACCGATTTAGGGCACTAAAGCGTCTCTACAATGAATTTCTCCTTTGATTGTAGATCTTAATCGGAGATCCGGAAAGAAAAAAAAAAAGAAAACAAAGAGATTATAAGTTCATATCATCTCTCTCTATTTGATTCTGATTTTTCTCTTTCTGAAACGGATGGAAGAATCCGAAGTTGAGGGAGTAAATATTTGTGGGCTGAATTTGTGGAATATTTGATTGGTTGATATAGTTATTGAAGCAATTATTTGCATCGGTTAGGTTATTTATAATCATAATTTGGTGATTTCTTCAAAGTTCTTTATTTGATTGAAACTTCCCAATTACGTGTTTAGTTATTTAGAAATTTGAAAAGAATAAAGAGAAAGTTAGAAGTCTGGGATGGGTAAATTAATATTTTAATAACATAATTTGGAT

mRNA sequence

AGAAAAGAAAAAGAAAAGGATATCTCTCTCTATTCAAATTTCAAATCCCCTTCACATCATCACAATCAATCCCATGGCCAATAACAACCCCTCCCTTTCTATTTCAACTCCTGGATCTTCCTCCTTAGGCTCCATGGACGAAGTCATCAGAGTCTTCAACAAATTCGACAAGAACGGCGACGGCAAGATTTCCGTCTCAGAACTCGGCGCTGCTCTCGGTGAACTCAGCGGCAACATCTCCACCGGCGAGATCCACCGCATTATGTCCGAGATCGACAAGGACGGTGACGGTTTCATCGACCTCGACGAGTTCACCGACTTCACCTCCTCTTCCACTGGTGGTAACAAAGATCTGCAGGACGCTTTCGATCTCTACGATATTGATAAGAACGGCTTAATCTCTGCCAAGGAGTTGCACTCTGTTCTCAAACGCCTTGGTGAAAAATGTAGCCTCAAAGATTGTTGCCGGATGATCAGTTCTGTTGATGTTGACGGTGATGGACATGTAAATTTCGAGGAATTCAAGAAGATGATGACGAGATCTTAGTCTTCTTCGCCAGTAGAGAGGTAGTTTCACAAATTTAATCAAATTTAGGCTTAGAATTTCAAAACCAAAATCGAGTGTTATCAGTTGATTCTTAGTGTGTACAGTCTAGAATCTATCGTTTCTTTCACGGTTTGTAACCGATTTAGGGCACTAAAGCGTCTCTACAATGAATTTCTCCTTTGATTGTAGATCTTAATCGGAGATCCGGAAAGAAAAAAAAAAAGAAAACAAAGAGATTATAAGTTCATATCATCTCTCTCTATTTGATTCTGATTTTTCTCTTTCTGAAACGGATGGAAGAATCCGAAGTTGAGGGAGTAAATATTTGTGGGCTGAATTTGTGGAATATTTGATTGGTTGATATAGTTATTGAAGCAATTATTTGCATCGGTTAGGTTATTTATAATCATAATTTGGTGATTTCTTCAAAGTTCTTTATTTGATTGAAACTTCCCAATTACGTGTTTAGTTATTTAGAAATTTGAAAAGAATAAAGAGAAAGTTAGAAGTCTGGGATGGGTAAATTAATATTTTAATAACATAATTTGGAT

Coding sequence (CDS)

ATGGCCAATAACAACCCCTCCCTTTCTATTTCAACTCCTGGATCTTCCTCCTTAGGCTCCATGGACGAAGTCATCAGAGTCTTCAACAAATTCGACAAGAACGGCGACGGCAAGATTTCCGTCTCAGAACTCGGCGCTGCTCTCGGTGAACTCAGCGGCAACATCTCCACCGGCGAGATCCACCGCATTATGTCCGAGATCGACAAGGACGGTGACGGTTTCATCGACCTCGACGAGTTCACCGACTTCACCTCCTCTTCCACTGGTGGTAACAAAGATCTGCAGGACGCTTTCGATCTCTACGATATTGATAAGAACGGCTTAATCTCTGCCAAGGAGTTGCACTCTGTTCTCAAACGCCTTGGTGAAAAATGTAGCCTCAAAGATTGTTGCCGGATGATCAGTTCTGTTGATGTTGACGGTGATGGACATGTAAATTTCGAGGAATTCAAGAAGATGATGACGAGATCTTAG

Protein sequence

MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEIHRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS

Homology

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BLAST of MELO3C020263.2 vs. NCBI nr
Match: XP_008457051.1 (PREDICTED: probable calcium-binding protein CML27 [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 3.2e-63
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX 60
           MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX
Sbjct: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120

Query: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 158
           LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 157

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BLAST of MELO3C020263.2 vs. NCBI nr
Match: XP_004145834.1 (PREDICTED: probable calcium-binding protein CML23 [Cucumis sativus] >KGN57816.1 hypothetical protein Csa_3G319280 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 3.5e-54
Identity = 144/157 (91.72%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX 60
           MA NN SLSISTPGSS+LGSMDE+IRVFNKFDKNGDGKISV+EL AALGELSGN XXXXX
Sbjct: 1   MAKNN-SLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           XXXXXXXXXXXXXXXXXXXXX      TGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120

Query: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 158
           LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 156

[Close]

BLAST of MELO3C020263.2 vs. NCBI nr
Match: XP_022948508.1 (probable calcium-binding protein CML23 [Cucurbita moschata] >XP_023524703.1 probable calcium-binding protein CML23 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46
Identity = 131/156 (83.97%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 9   SISTPGS----SSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXXXXXX 68
           S+S P S     +LGSMDEVI VF KFDKNGDGKIS+ EL AALGEL G IXXXXXXXXX
Sbjct: 7   SVSNPSSPNPGGALGSMDEVIMVFKKFDKNGDGKISIKELAAALGELGGKIXXXXXXXXX 66

Query: 69  XXXXXXXXXXXXXXXXXDF---TSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRL 128
           XXXXXXXXXXXXXXXXX+F   +SS+ GG+KDLQDAFDLYD+DKNGLISAKELHSVLKRL
Sbjct: 67  XXXXXXXXXXXXXXXXXEFHQNSSSTGGGSKDLQDAFDLYDVDKNGLISAKELHSVLKRL 126

Query: 129 GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 158
           GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 127 GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 162

[Close]

BLAST of MELO3C020263.2 vs. NCBI nr
Match: XP_022143269.1 (probable calcium-binding protein CML23 [Momordica charantia])

HSP 1 Score: 194.1 bits (492), Expect = 3.5e-46
Identity = 133/160 (83.12%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX 60
           MA  + S   ST    +LGSMDEV +VFNKFDKNGDGKISV+ELG ALGEL G  XXXXX
Sbjct: 3   MAKKSVSDPSSTNLGGALGSMDEVTKVFNKFDKNGDGKISVNELGDALGELGGXXXXXXX 62

Query: 61  XXXXXXXXXXXXXXXXXXXXXDF---TSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSV 120
           XXXXXXXXXXXXXXXXXXXXX F    S++ GGNKDLQDAFDLYDIDKNGLISAKELHSV
Sbjct: 63  XXXXXXXXXXXXXXXXXXXXXXFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSV 122

Query: 121 LKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 158
           LKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 123 LKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 162

[Close]

BLAST of MELO3C020263.2 vs. NCBI nr
Match: XP_022998716.1 (probable calcium-binding protein CML23 [Cucurbita maxima])

HSP 1 Score: 192.6 bits (488), Expect = 1.0e-45
Identity = 130/156 (83.33%), Postives = 138/156 (88.46%), Query Frame = 0


Query: 9   SISTPGS----SSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXXXXXX 68
           S+S P S     +LGSMDEVI VF KFDKNGDGKIS+ EL AALGEL G IXXXXXXXXX
Sbjct: 7   SVSNPSSPNPGGALGSMDEVIMVFKKFDKNGDGKISIKELAAALGELGGKIXXXXXXXXX 66

Query: 69  XXXXXXXXXXXXXXXXXDF---TSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRL 128
           XXXXXXXXXXXXXXXXX+F    SS+ GG+KDLQDAFDL+D+DKNGLISAKELHSVLKRL
Sbjct: 67  XXXXXXXXXXXXXXXXXEFHQNFSSTGGGSKDLQDAFDLFDVDKNGLISAKELHSVLKRL 126

Query: 129 GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 158
           GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 127 GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 162

[Close]

BLAST of MELO3C020263.2 vs. TAIR10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 129.4 bits (324), Expect = 1.9e-30
Identity = 71/157 (45.22%), Postives = 91/157 (57.96%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX 60
           MA+ NP  +  TP +  + + +E+ +VF++FD NGDGKISV ELG     +  +      
Sbjct: 1   MASANPETAKPTPATVDMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETEL 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
                                    SS+    +++DAFDLYD DKNGLISA ELH VL R
Sbjct: 61  NRVLEEVDTDRDGYINLDEFSTLCRSSSSA-AEIRDAFDLYDQDKNGLISASELHQVLNR 120

Query: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 158
           LG  CS++DC RMI  VD DGDG+VNFEEF+KMMT S
Sbjct: 121 LGMSCSVEDCTRMIGPVDADGDGNVNFEEFQKMMTSS 156

[Close]

BLAST of MELO3C020263.2 vs. TAIR10
Match: AT1G73630.1 (EF hand calcium-binding protein family)

HSP 1 Score: 110.5 bits (275), Expect = 9.3e-25
Identity = 93/155 (60.00%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX 60
           MAN N     ST  S++  +  E+ +VF+KFD NGDGKISVSELG     + G  XXXXX
Sbjct: 1   MANTNLE---STNKSTTPSTDMELKKVFDKFDANGDGKISVSELGNVFKSM-GXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           XXXXXXXXXXXXXXXXXXXXX           ++++AFDLYD +KNGLIS+ E+H VL R
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEIREAFDLYDQNKNGLISSSEIHKVLNR 120

Query: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMT 156
           LG  CS++DC RMI  VD DGDG+VNFEEF+KMM+
Sbjct: 121 LGMTCSVEDCVRMIGHVDTDGDGNVNFEEFQKMMS 151

[Close]

BLAST of MELO3C020263.2 vs. TAIR10
Match: AT1G24620.1 (EF hand calcium-binding protein family)

HSP 1 Score: 104.4 bits (259), Expect = 6.6e-23
Identity = 60/155 (38.71%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 4   NNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXXXXX 63
           ++P L  +  G + +  ++    VF KFD NGDGKIS  ELGA +  L   +        
Sbjct: 21  DSPYLQKARSGKTEIRELE---AVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKA 80

Query: 64  XXXXXXXXXXXXXXXXXXDFTSSSTGGN---KDLQDAFDLYDIDKNGLISAKELHSVLKR 123
                             +  +     N   ++L+DAF +YDID NG ISA+ELH VL+ 
Sbjct: 81  ITEIDRKGDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRS 140

Query: 124 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMT 156
           LG++CS+ +C +MI  VD DGDG ++FEEFK MMT
Sbjct: 141 LGDECSIAECRKMIGGVDKDGDGTIDFEEFKIMMT 172

[Close]

BLAST of MELO3C020263.2 vs. TAIR10
Match: AT1G66400.1 (calmodulin like 23)

HSP 1 Score: 101.3 bits (251), Expect = 5.6e-22
Identity = 85/142 (59.86%), Postives = 99/142 (69.72%), Query Frame = 0


Query: 18  LGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGN-----IXXXXXXXXXXXXXXXXX 77
           LGSM+++ +VF +FDKN DGKIS+ EL   +G LS N      XXXXXXXXXXXXXXXXX
Sbjct: 10  LGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNAXXXXXXXXXXXXXXXXXXXXXX 69

Query: 78  XXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCR 137
           XXXXXXXXX                     +D+NG ISA ELHSV+K LGEKCS++DC R
Sbjct: 70  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDRNGRISANELHSVMKNLGEKCSIQDCQR 129

Query: 138 MISSVDVDGDGHVNFEEFKKMM 155
           MI+ VD DGDG V+FEEFKKMM
Sbjct: 130 MINKVDSDGDGCVDFEEFKKMM 151

[Close]

BLAST of MELO3C020263.2 vs. TAIR10
Match: AT2G15680.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 92.8 bits (229), Expect = 2.0e-19
Identity = 75/149 (50.34%), Postives = 99/149 (66.44%), Query Frame = 0


Query: 8   LSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXXXXXXXXX 67
           LS   PG  S  S++E+ RVF++FD + DGKIS +E    L  L        XXXXXXXX
Sbjct: 35  LSSPGPGGFSQPSVNEMRRVFSRFDLDKDGKISQTEYKVVLRALGQERAIEDXXXXXXXX 94

Query: 68  XXXXXXXXXXXXXXDFTSSSTG-GNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCS 127
           XXXXXXXXX     D    S G  + D++++F  +D++ +G ISA+E+ SVL +LGE+CS
Sbjct: 95  XXXXXXXXXFREFIDAYKRSGGIRSSDIRNSFWTFDLNGDGKISAEEVMSVLWKLGERCS 154

Query: 128 LKDCCRMISSVDVDGDGHVNFEEFKKMMT 156
           L+DC RM+ +VD DGDG VN EEF KMM+
Sbjct: 155 LEDCNRMVRAVDADGDGLVNMEEFIKMMS 183

[Close]

BLAST of MELO3C020263.2 vs. Swiss-Prot
Match: sp|Q9LE22|CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.5e-29
Identity = 71/157 (45.22%), Postives = 91/157 (57.96%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX 60
           MA+ NP  +  TP +  + + +E+ +VF++FD NGDGKISV ELG     +  +      
Sbjct: 1   MASANPETAKPTPATVDMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETEL 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
                                    SS+    +++DAFDLYD DKNGLISA ELH VL R
Sbjct: 61  NRVLEEVDTDRDGYINLDEFSTLCRSSSSA-AEIRDAFDLYDQDKNGLISASELHQVLNR 120

Query: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 158
           LG  CS++DC RMI  VD DGDG+VNFEEF+KMMT S
Sbjct: 121 LGMSCSVEDCTRMIGPVDADGDGNVNFEEFQKMMTSS 156

[Close]

BLAST of MELO3C020263.2 vs. Swiss-Prot
Match: sp|Q9M7R0|ALL8_OLEEU (Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.2e-24
Identity = 68/159 (42.77%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 3   NNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXXXX 62
           N+ PS+ +  P        +EV  VFN+FD NGDGKIS  EL   L  L  N        
Sbjct: 8   NSKPSVYLQEP--------NEVQGVFNRFDANGDGKISGDELAGVLKALGSNTSKEEIGR 67

Query: 63  XXXXXXXXXXXXXXXXXXXDFTSS------STGGNKDLQDAFDLYDIDKNGLISAKELHS 122
                               F  +      S+GG  +L++AF+LYD D NGLIS+ ELH 
Sbjct: 68  IMEEIDTDKDGFINVQEFAAFVKAETDPYPSSGGENELKEAFELYDQDHNGLISSVELHK 127

Query: 123 VLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMT 156
           +L RLGE+ +  DC  MI SVD DGDG+V+FEEFKKMMT
Sbjct: 128 ILTRLGERYAEHDCVEMIKSVDSDGDGYVSFEEFKKMMT 158

[Close]

BLAST of MELO3C020263.2 vs. Swiss-Prot
Match: sp|Q9C9U8|CML26_ARATH (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.7e-23
Identity = 93/155 (60.00%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX 60
           MAN N     ST  S++  +  E+ +VF+KFD NGDGKISVSELG     + G  XXXXX
Sbjct: 1   MANTNLE---STNKSTTPSTDMELKKVFDKFDANGDGKISVSELGNVFKSM-GXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           XXXXXXXXXXXXXXXXXXXXX           ++++AFDLYD +KNGLIS+ E+H VL R
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEIREAFDLYDQNKNGLISSSEIHKVLNR 120

Query: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMT 156
           LG  CS++DC RMI  VD DGDG+VNFEEF+KMM+
Sbjct: 121 LGMTCSVEDCVRMIGHVDTDGDGNVNFEEFQKMMS 151

[Close]

BLAST of MELO3C020263.2 vs. Swiss-Prot
Match: sp|Q0DJV6|CML18_ORYSJ (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.4e-22
Identity = 62/149 (41.61%), Postives = 79/149 (53.02%), Query Frame = 0


Query: 21  MDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXXXXXXXXXXXXXXXXXXXXXX 80
           M E+ +VF ++D NGDGKIS  EL + L  L   +                         
Sbjct: 3   MAELEQVFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEF 62

Query: 81  XDFTSSST------GGN---------KDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKC 140
             F    T      GG+          +L++AF +YD D NG ISA+ELH VL++LG+KC
Sbjct: 63  AAFHCGPTPAHGGKGGDAKDQEAASEAELREAFRMYDADSNGKISARELHRVLRQLGDKC 122

Query: 141 SLKDCCRMISSVDVDGDGHVNFEEFKKMM 155
           S+ DC RMI SVD DGDG VNF+EFKKMM
Sbjct: 123 SVADCSRMIRSVDADGDGCVNFDEFKKMM 151

[Close]

BLAST of MELO3C020263.2 vs. Swiss-Prot
Match: sp|Q9FYK2|CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21
Identity = 60/155 (38.71%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 4   NNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXXXXX 63
           ++P L  +  G + +  ++    VF KFD NGDGKIS  ELGA +  L   +        
Sbjct: 21  DSPYLQKARSGKTEIRELE---AVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKA 80

Query: 64  XXXXXXXXXXXXXXXXXXDFTSSSTGGN---KDLQDAFDLYDIDKNGLISAKELHSVLKR 123
                             +  +     N   ++L+DAF +YDID NG ISA+ELH VL+ 
Sbjct: 81  ITEIDRKGDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRS 140

Query: 124 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMT 156
           LG++CS+ +C +MI  VD DGDG ++FEEFK MMT
Sbjct: 141 LGDECSIAECRKMIGGVDKDGDGTIDFEEFKIMMT 172

[Close]

BLAST of MELO3C020263.2 vs. TrEMBL
Match: tr|A0A1S3C5W9|A0A1S3C5W9_CUCME (probable calcium-binding protein CML27 OS=Cucumis melo OX=3656 GN=LOC103496821 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.1e-63
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX 60
           MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX
Sbjct: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120

Query: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 158
           LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 157

[Close]

BLAST of MELO3C020263.2 vs. TrEMBL
Match: tr|A0A0A0LCM1|A0A0A0LCM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G319280 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.3e-54
Identity = 144/157 (91.72%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX 60
           MA NN SLSISTPGSS+LGSMDE+IRVFNKFDKNGDGKISV+EL AALGELSGN XXXXX
Sbjct: 1   MAKNN-SLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           XXXXXXXXXXXXXXXXXXXXX      TGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120

Query: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 158
           LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 156

[Close]

BLAST of MELO3C020263.2 vs. TrEMBL
Match: tr|A0A166AVJ5|A0A166AVJ5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_010743 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.6e-33
Identity = 103/142 (72.54%), Postives = 116/142 (81.69%), Query Frame = 0


Query: 19  GSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXXXXXXXXXXXXXXXXXXXX 78
           G M+EV +VFNKFD NGDGKI ++ELG+ L  L  N   XXXXXXXXXXXXXXXXXXXXX
Sbjct: 10  GDMEEVKKVFNKFDTNGDGKIDLTELGSILRALGTNAPHXXXXXXXXXXXXXXXXXXXXX 69

Query: 79  XXXDF---TSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCRMIS 138
           XXXDF    S      KDL+DAFDLYD+DKNGLIS  ELH+VLKRLGEKCSLKDC +M+S
Sbjct: 70  XXXDFHLGGSDDAANLKDLRDAFDLYDLDKNGLISVSELHAVLKRLGEKCSLKDCKKMVS 129

Query: 139 SVDVDGDGHVNFEEFKKMMTRS 158
           SVDVDGDG+VNFEEFKKMM ++
Sbjct: 130 SVDVDGDGNVNFEEFKKMMNKA 151

[Close]

BLAST of MELO3C020263.2 vs. TrEMBL
Match: tr|A0A2P5BY36|A0A2P5BY36_PARAD (Parvalbumin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_200320 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32
Identity = 99/153 (64.71%), Postives = 109/153 (71.24%), Query Frame = 0


Query: 16  SSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXXXXXXXXXXXXXXXXX 75
           SSLG+MD+V +VFNKFD NGDG+IS  EL   L  L       XXXXXXXXXXXXXXXXX
Sbjct: 12  SSLGTMDDVRKVFNKFDSNGDGRISCDELRGMLLALGSKTSTEXXXXXXXXXXXXXXXXX 71

Query: 76  XXXXXXDFTSSS------------TGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGE 135
                 +F S S              GNK+L+DAFDLYD+DKNGLISA ELH+V+KRLGE
Sbjct: 72  DLKEFAEFHSGSEADQCGGDGAAAAAGNKELKDAFDLYDLDKNGLISASELHAVMKRLGE 131

Query: 136 KCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTR 157
           KCSL DC RMI SVD DGDG VNFEEFKKMMTR
Sbjct: 132 KCSLSDCSRMIRSVDADGDGSVNFEEFKKMMTR 164

[Close]

BLAST of MELO3C020263.2 vs. TrEMBL
Match: tr|A0A2P5E778|A0A2P5E778_9ROSA (Parvalbumin OS=Trema orientalis OX=63057 GN=TorRG33x02_228270 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32
Identity = 97/153 (63.40%), Postives = 107/153 (69.93%), Query Frame = 0


Query: 16  SSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXXXXXXXXXXXXXXXXX 75
           SSLG+MD+V +VFNKFD NGDG+IS  EL   L  L        XXXXXXXXXXXXXXX 
Sbjct: 12  SSLGTMDDVRKVFNKFDSNGDGRISCDELRGMLLALGSKTSTEEXXXXXXXXXXXXXXXI 71

Query: 76  XXXXXXDFTSSST------------GGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGE 135
                 +F S S              GNK+L+DAFDLYD+DKNGLISA ELH+V+KRLGE
Sbjct: 72  DLKEFAEFHSGSEADQCGGAGAAAGAGNKELKDAFDLYDLDKNGLISASELHAVMKRLGE 131

Query: 136 KCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTR 157
           KCSL DC RMI SVD DGDG VNFEEFKKMMTR
Sbjct: 132 KCSLSDCSRMIRSVDADGDGSVNFEEFKKMMTR 164

The following BLAST results are available for this feature:

BLAST of MELO3C020263.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457051.1	3.2e-63	100.00	PREDICTED: probable calcium-binding protein CML27 [Cucumis melo]	[more]
XP_004145834.1	3.5e-54	91.72	PREDICTED: probable calcium-binding protein CML23 [Cucumis sativus] >KGN57816.1 ...	[more]
XP_022948508.1	1.6e-46	83.97	probable calcium-binding protein CML23 [Cucurbita moschata] >XP_023524703.1 prob...	[more]
XP_022143269.1	3.5e-46	83.13	probable calcium-binding protein CML23 [Momordica charantia]	[more]
XP_022998716.1	1.0e-45	83.33	probable calcium-binding protein CML23 [Cucurbita maxima]	[more]

BLAST of MELO3C020263.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18210.1	1.9e-30	45.22	Calcium-binding EF-hand family protein	[more]
AT1G73630.1	9.3e-25	60.00	EF hand calcium-binding protein family	[more]
AT1G24620.1	6.6e-23	38.71	EF hand calcium-binding protein family	[more]
AT1G66400.1	5.6e-22	59.86	calmodulin like 23	[more]
AT2G15680.1	2.0e-19	50.34	Calcium-binding EF-hand family protein	[more]

BLAST of MELO3C020263.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LE22\|CML27_ARATH	3.5e-29	45.22	Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 ...	[more]
sp\|Q9M7R0\|ALL8_OLEEU	1.2e-24	42.77	Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1	[more]
sp\|Q9C9U8\|CML26_ARATH	1.7e-23	60.00	Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 ...	[more]
sp\|Q0DJV6\|CML18_ORYSJ	5.4e-22	41.61	Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
sp\|Q9FYK2\|CML25_ARATH	1.2e-21	38.71	Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 ...	[more]

BLAST of MELO3C020263.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C5W9\|A0A1S3C5W9_CUCME	2.1e-63	100.00	probable calcium-binding protein CML27 OS=Cucumis melo OX=3656 GN=LOC103496821 P...	[more]
tr\|A0A0A0LCM1\|A0A0A0LCM1_CUCSA	2.3e-54	91.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G319280 PE=4 SV=1	[more]
tr\|A0A166AVJ5\|A0A166AVJ5_DAUCA	6.6e-33	72.54	Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_010743 ...	[more]
tr\|A0A2P5BY36\|A0A2P5BY36_PARAD	1.1e-32	64.71	Parvalbumin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_200320 PE=4 SV=1	[more]
tr\|A0A2P5E778\|A0A2P5E778_9ROSA	1.5e-32	63.40	Parvalbumin OS=Trema orientalis OX=63057 GN=TorRG33x02_228270 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020263.2.1	MELO3C020263.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 59..87 e-value: 2.1E-5 score: 34.0 coord: 23..51 e-value: 9.5E-6 score: 35.1 coord: 93..121 e-value: 3.2E-5 score: 33.4 coord: 129..157 e-value: 2.1E-4 score: 30.6
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 92..154 e-value: 1.4E-11 score: 44.6 coord: 25..84 e-value: 3.3E-12 score: 46.6
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 19..54 score: 14.569
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 89..124 score: 14.318
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 125..157 score: 13.174
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 55..83 score: 9.269
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 23..83 e-value: 4.90197E-17 score: 70.6545
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 93..155 e-value: 9.05647E-19 score: 75.2769
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 88..157 e-value: 3.5E-23 score: 83.6
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 12..87 e-value: 2.4E-20 score: 75.2
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 9..157
None	No IPR available	PANTHER	PTHR10891:SF698	CALCIUM-BINDING PROTEIN CML26-RELATED	coord: 9..157
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 138..150
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 32..44
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 102..114
IPR011992	EF-hand domain pair	SUPERFAMILY	SSF47473	EF-hand	coord: 21..156

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C020263.2	Csa3G319280	Cucumber (Chinese Long) v2	cumedB239
MELO3C020263.2	CSPI03G21520	Wild cucumber (PI 183967)	cpimedB240
MELO3C020263.2	Cucsa.375430	Cucumber (Gy14) v1	cgymedB606
MELO3C020263.2	CmaCh14G008380	Cucurbita maxima (Rimu)	cmamedB274
MELO3C020263.2	CmoCh14G008530	Cucurbita moschata (Rifu)	cmomedB261
MELO3C020263.2	Lsi05G003280	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C020263.2	Cp4.1LG03g05830	Cucurbita pepo (Zucchini)	cpemedB694
MELO3C020263.2	Cp4.1LG02g16750	Cucurbita pepo (Zucchini)	cpemedB630
MELO3C020263.2	CsGy3G020790	Cucumber (Gy14) v2	cgybmedB216
MELO3C020263.2	Cla013188	Watermelon (97103) v1	medwmB448
MELO3C020263.2	ClCG05G011200	Watermelon (Charleston Gray)	medwcgB417
MELO3C020263.2	Cla97C05G093380	Watermelon (97103) v2	medwmbB424
MELO3C020263.2	Bhi01G001514	Wax gourd	medwgoB546
MELO3C020263.2	Carg07449	Silver-seed gourd	carmedB0771
MELO3C020263.2	Carg26921	Silver-seed gourd	carmedB0521
MELO3C020263.2	CsaV3_3G021210	Cucumber (Chinese Long) v3	cucmedB247

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C020263.2	Cucurbita maxima (Rimu)	cmamedB496
MELO3C020263.2	Cucurbita moschata (Rifu)	cmomedB483