CsGy3G020790 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G020790
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionprobable calcium-binding protein CML27
LocationChr3 : 18137683 .. 18138153 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAGAACAACTCCCTTTCAATTTCTACTCCAGGATCCTCCGCCTTAGGCTCCATGGACGAAATCATCCGAGTCTTCAACAAATTCGACAAGAACGGCGACGGCAAGATTTCCGTCACAGAACTCGCCGCTGCTCTCGGTGAACTCAGCGGCAACATCTCCACCGACGAGATCCACCGCATTATGTCCGAGATCGATAAGGACGGTGACGGTTTCATCGACCTCGATGAGTTCACCGACTTCACCTCCTCTTCCACTGGAGGAAACAAAGATCTGCAGGACGCTTTCGATCTCTACGATATTGATAAGAACGGCTTAATCTCTGCCAAGGAGTTGCACTCTGTTCTCAAACGCCTTGGTGAAAAATGTAGCCTCAAAGATTGTTGCCGGATGATCAGTTCTGTTGATGTTGACGGTGATGGACATGTAAATTTCGAGGAATTCAAGAAGATGATGACGAGATCTTAG

mRNA sequence

ATGGCCAAGAACAACTCCCTTTCAATTTCTACTCCAGGATCCTCCGCCTTAGGCTCCATGGACGAAATCATCCGAGTCTTCAACAAATTCGACAAGAACGGCGACGGCAAGATTTCCGTCACAGAACTCGCCGCTGCTCTCGGTGAACTCAGCGGCAACATCTCCACCGACGAGATCCACCGCATTATGTCCGAGATCGATAAGGACGGTGACGGTTTCATCGACCTCGATGAGTTCACCGACTTCACCTCCTCTTCCACTGGAGGAAACAAAGATCTGCAGGACGCTTTCGATCTCTACGATATTGATAAGAACGGCTTAATCTCTGCCAAGGAGTTGCACTCTGTTCTCAAACGCCTTGGTGAAAAATGTAGCCTCAAAGATTGTTGCCGGATGATCAGTTCTGTTGATGTTGACGGTGATGGACATGTAAATTTCGAGGAATTCAAGAAGATGATGACGAGATCTTAG

Coding sequence (CDS)

ATGGCCAAGAACAACTCCCTTTCAATTTCTACTCCAGGATCCTCCGCCTTAGGCTCCATGGACGAAATCATCCGAGTCTTCAACAAATTCGACAAGAACGGCGACGGCAAGATTTCCGTCACAGAACTCGCCGCTGCTCTCGGTGAACTCAGCGGCAACATCTCCACCGACGAGATCCACCGCATTATGTCCGAGATCGATAAGGACGGTGACGGTTTCATCGACCTCGATGAGTTCACCGACTTCACCTCCTCTTCCACTGGAGGAAACAAAGATCTGCAGGACGCTTTCGATCTCTACGATATTGATAAGAACGGCTTAATCTCTGCCAAGGAGTTGCACTCTGTTCTCAAACGCCTTGGTGAAAAATGTAGCCTCAAAGATTGTTGCCGGATGATCAGTTCTGTTGATGTTGACGGTGATGGACATGTAAATTTCGAGGAATTCAAGAAGATGATGACGAGATCTTAG

Protein sequence

MAKNNSLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNISTDEIHRIMSEIDKDGDGFIDLDEFTDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Homology
[Close]
BLAST of CsGy3G020790 vs. NCBI nr
Match: XP_004145834.1 (PREDICTED: probable calcium-binding protein CML23 [Cucumis sativus] >KGN57816.1 hypothetical protein Csa_3G319280 [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 4.0e-58
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 1   MAKNNSLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXX 60
           MAKNNSLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXX
Sbjct: 1   MAKNNSLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRL 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRL 120

Query: 121 GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 157
           GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 121 GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 156

[Close]
BLAST of CsGy3G020790 vs. NCBI nr
Match: XP_008457051.1 (PREDICTED: probable calcium-binding protein CML27 [Cucumis melo])

HSP 1 Score: 222.6 bits (566), Expect = 9.1e-55
Identity = 144/157 (91.72%), Postives = 147/157 (93.63%), Query Frame = 0 

Query: 1   MAKNN-SLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXX 60
           MA NN SLSISTPGSS+LGSMDE+IRVFNKFDKNGDGKISV+EL AALGELSGN XXXXX
Sbjct: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           XXXXXXXXXXXXXXXXXXXXX      TGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120

Query: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 157
           LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 157

[Close]
BLAST of CsGy3G020790 vs. NCBI nr
Match: XP_022143269.1 (probable calcium-binding protein CML23 [Momordica charantia])

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44
Identity = 131/156 (83.97%), Postives = 136/156 (87.18%), Query Frame = 0 

Query: 8   SISTPGSS----ALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXXXXX 67
           S+S P S+    ALGSMDE+ +VFNKFDKNGDGKISV EL  ALGEL G XXXXXXXXXX
Sbjct: 7   SVSDPSSTNLGGALGSMDEVTKVFNKFDKNGDGKISVNELGDALGELGGXXXXXXXXXXX 66

Query: 68  XXXXXXXXXXXXXXXXXXXXXXXT---GGNKDLQDAFDLYDIDKNGLISAKELHSVLKRL 127
           XXXXXXXXXXXXXXXXXX     +   GGNKDLQDAFDLYDIDKNGLISAKELHSVLKRL
Sbjct: 67  XXXXXXXXXXXXXXXXXXFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRL 126

Query: 128 GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 157
           GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 127 GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 162

[Close]
BLAST of CsGy3G020790 vs. NCBI nr
Match: XP_022948508.1 (probable calcium-binding protein CML23 [Cucurbita moschata] >XP_023524703.1 probable calcium-binding protein CML23 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44
Identity = 129/160 (80.62%), Postives = 137/160 (85.62%), Query Frame = 0 

Query: 1   MAKNNSLSISTPG-SSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXX 60
           MAK +  + S+P    ALGSMDE+I VF KFDKNGDGKIS+ ELAAALGEL G  XXXXX
Sbjct: 3   MAKTSVSNPSSPNPGGALGSMDEVIMVFKKFDKNGDGKISIKELAAALGELGGKIXXXXX 62

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXT---GGNKDLQDAFDLYDIDKNGLISAKELHSV 120
           XXXXXXXXXXXXXXXXXXXXX      +   GG+KDLQDAFDLYD+DKNGLISAKELHSV
Sbjct: 63  XXXXXXXXXXXXXXXXXXXXXEFHQNSSSTGGGSKDLQDAFDLYDVDKNGLISAKELHSV 122

Query: 121 LKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 157
           LKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 123 LKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 162

[Close]
BLAST of CsGy3G020790 vs. NCBI nr
Match: XP_022998716.1 (probable calcium-binding protein CML23 [Cucurbita maxima])

HSP 1 Score: 187.2 bits (474), Expect = 4.3e-44
Identity = 128/160 (80.00%), Postives = 137/160 (85.62%), Query Frame = 0 

Query: 1   MAKNNSLSISTPG-SSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXX 60
           MAK +  + S+P    ALGSMDE+I VF KFDKNGDGKIS+ ELAAALGEL G  XXXXX
Sbjct: 3   MAKTSVSNPSSPNPGGALGSMDEVIMVFKKFDKNGDGKISIKELAAALGELGGKIXXXXX 62

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXT---GGNKDLQDAFDLYDIDKNGLISAKELHSV 120
           XXXXXXXXXXXXXXXXXXXXX      +   GG+KDLQDAFDL+D+DKNGLISAKELHSV
Sbjct: 63  XXXXXXXXXXXXXXXXXXXXXEFHQNFSSTGGGSKDLQDAFDLFDVDKNGLISAKELHSV 122

Query: 121 LKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 157
           LKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 123 LKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 162

[Close]
BLAST of CsGy3G020790 vs. TAIR10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 121.3 bits (303), Expect = 5.2e-28
Identity = 65/146 (44.52%), Postives = 82/146 (56.16%), Query Frame = 0 

Query: 11  TPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXXXXXXXXXXXX 70
           TP +  + + +E+ +VF++FD NGDGKISV EL     +  G                  
Sbjct: 12  TPATVDMANPEELKKVFDQFDSNGDGKISVLELGGVF-KAMGTSYTETELNRVLEEVDTD 71

Query: 71  XXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCC 130
                           +    +++DAFDLYD DKNGLISA ELH VL RLG  CS++DC 
Sbjct: 72  RDGYINLDEFSTLCRSSSSAAEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCT 131

Query: 131 RMISSVDVDGDGHVNFEEFKKMMTRS 157
           RMI  VD DGDG+VNFEEF+KMMT S
Sbjct: 132 RMIGPVDADGDGNVNFEEFQKMMTSS 156

[Close]
BLAST of CsGy3G020790 vs. TAIR10
Match: AT1G73630.1 (EF hand calcium-binding protein family)

HSP 1 Score: 107.8 bits (268), Expect = 6.0e-24
Identity = 94/145 (64.83%), Postives = 113/145 (77.93%), Query Frame = 0 

Query: 10  STPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXXXXXXXXXXX 69
           ST  S+   +  E+ +VF+KFD NGDGKISV+EL      + G XXXXXXXXXXXXXXXX
Sbjct: 8   STNKSTTPSTDMELKKVFDKFDANGDGKISVSELGNVFKSM-GXXXXXXXXXXXXXXXXX 67

Query: 70  XXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDC 129
           XXXXXXXXXXXXXXXXX     ++++AFDLYD +KNGLIS+ E+H VL RLG  CS++DC
Sbjct: 68  XXXXXXXXXXXXXXXXXXXXXVEIREAFDLYDQNKNGLISSSEIHKVLNRLGMTCSVEDC 127

Query: 130 CRMISSVDVDGDGHVNFEEFKKMMT 155
            RMI  VD DGDG+VNFEEF+KMM+
Sbjct: 128 VRMIGHVDTDGDGNVNFEEFQKMMS 151

[Close]
BLAST of CsGy3G020790 vs. TAIR10
Match: AT1G66400.1 (calmodulin like 23)

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22
Identity = 93/144 (64.58%), Postives = 107/144 (74.31%), Query Frame = 0 

Query: 15  SALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGN-----XXXXXXXXXXXXXXXX 74
           + LGSM++I +VF +FDKN DGKIS+ EL   +G LS N     XXXXXXXXXXXXXXXX
Sbjct: 8   NCLGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNAXXXXXXXXXXXXXXXXXXXX 67

Query: 75  XXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDC 134
           XXXXXXXXXXXXXXXXX               +D+NG ISA ELHSV+K LGEKCS++DC
Sbjct: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDRNGRISANELHSVMKNLGEKCSIQDC 127

Query: 135 CRMISSVDVDGDGHVNFEEFKKMM 154
            RMI+ VD DGDG V+FEEFKKMM
Sbjct: 128 QRMINKVDSDGDGCVDFEEFKKMM 151

[Close]
BLAST of CsGy3G020790 vs. TAIR10
Match: AT1G24620.1 (EF hand calcium-binding protein family)

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-21
Identity = 57/136 (41.91%), Postives = 72/136 (52.94%), Query Frame = 0 

Query: 22  EIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 81
           E+  VF KFD NGDGKIS  EL A +  L                               
Sbjct: 37  ELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVE 96

Query: 82  XXXXXTGGN---KDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCRMISSVDV 141
                   N   ++L+DAF +YDID NG ISA+ELH VL+ LG++CS+ +C +MI  VD 
Sbjct: 97  LNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVDK 156

Query: 142 DGDGHVNFEEFKKMMT 155
           DGDG ++FEEFK MMT
Sbjct: 157 DGDGTIDFEEFKIMMT 172

[Close]
BLAST of CsGy3G020790 vs. TAIR10
Match: AT2G15680.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 94.4 bits (233), Expect = 6.8e-20
Identity = 75/154 (48.70%), Postives = 103/154 (66.88%), Query Frame = 0 

Query: 3   KNNSLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXXXX 62
           +++ LS   PG  +  S++E+ RVF++FD + DGKIS TE    L  L G       XXX
Sbjct: 31  QSSGLSSPGPGGFSQPSVNEMRRVFSRFDLDKDGKISQTEYKVVLRAL-GQERAIEDXXX 90

Query: 63  XXXXXXXXXXXXXXXXXXXXXXXXTGG--NKDLQDAFDLYDIDKNGLISAKELHSVLKRL 122
           XXXXXXXXXXXXXX          +GG  + D++++F  +D++ +G ISA+E+ SVL +L
Sbjct: 91  XXXXXXXXXXXXXXFREFIDAYKRSGGIRSSDIRNSFWTFDLNGDGKISAEEVMSVLWKL 150

Query: 123 GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMT 155
           GE+CSL+DC RM+ +VD DGDG VN EEF KMM+
Sbjct: 151 GERCSLEDCNRMVRAVDADGDGLVNMEEFIKMMS 183

[Close]
BLAST of CsGy3G020790 vs. Swiss-Prot
Match: sp|Q9LE22|CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.4e-27
Identity = 65/146 (44.52%), Postives = 82/146 (56.16%), Query Frame = 0 

Query: 11  TPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXXXXXXXXXXXX 70
           TP +  + + +E+ +VF++FD NGDGKISV EL     +  G                  
Sbjct: 12  TPATVDMANPEELKKVFDQFDSNGDGKISVLELGGVF-KAMGTSYTETELNRVLEEVDTD 71

Query: 71  XXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCC 130
                           +    +++DAFDLYD DKNGLISA ELH VL RLG  CS++DC 
Sbjct: 72  RDGYINLDEFSTLCRSSSSAAEIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCT 131

Query: 131 RMISSVDVDGDGHVNFEEFKKMMTRS 157
           RMI  VD DGDG+VNFEEF+KMMT S
Sbjct: 132 RMIGPVDADGDGNVNFEEFQKMMTSS 156

[Close]
BLAST of CsGy3G020790 vs. Swiss-Prot
Match: sp|Q9M7R0|ALL8_OLEEU (Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23
Identity = 63/140 (45.00%), Postives = 76/140 (54.29%), Query Frame = 0 

Query: 21  DEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXXXXXXXXXXXXXXXXXXXXXX 80
           +E+  VFN+FD NGDGKIS  ELA  L  L  N                           
Sbjct: 19  NEVQGVFNRFDANGDGKISGDELAGVLKALGSNTSKEEIGRIMEEIDTDKDGFINVQEFA 78

Query: 81  XXXXXXT------GGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCRMIS 140
                 T      GG  +L++AF+LYD D NGLIS+ ELH +L RLGE+ +  DC  MI 
Sbjct: 79  AFVKAETDPYPSSGGENELKEAFELYDQDHNGLISSVELHKILTRLGERYAEHDCVEMIK 138

Query: 141 SVDVDGDGHVNFEEFKKMMT 155
           SVD DGDG+V+FEEFKKMMT
Sbjct: 139 SVDSDGDGYVSFEEFKKMMT 158

[Close]
BLAST of CsGy3G020790 vs. Swiss-Prot
Match: sp|Q9C9U8|CML26_ARATH (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22
Identity = 94/145 (64.83%), Postives = 113/145 (77.93%), Query Frame = 0 

Query: 10  STPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXXXXXXXXXXX 69
           ST  S+   +  E+ +VF+KFD NGDGKISV+EL      + G XXXXXXXXXXXXXXXX
Sbjct: 8   STNKSTTPSTDMELKKVFDKFDANGDGKISVSELGNVFKSM-GXXXXXXXXXXXXXXXXX 67

Query: 70  XXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDC 129
           XXXXXXXXXXXXXXXXX     ++++AFDLYD +KNGLIS+ E+H VL RLG  CS++DC
Sbjct: 68  XXXXXXXXXXXXXXXXXXXXXVEIREAFDLYDQNKNGLISSSEIHKVLNRLGMTCSVEDC 127

Query: 130 CRMISSVDVDGDGHVNFEEFKKMMT 155
            RMI  VD DGDG+VNFEEF+KMM+
Sbjct: 128 VRMIGHVDTDGDGNVNFEEFQKMMS 151

[Close]
BLAST of CsGy3G020790 vs. Swiss-Prot
Match: sp|Q0DJV6|CML18_ORYSJ (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.1e-22
Identity = 63/149 (42.28%), Postives = 78/149 (52.35%), Query Frame = 0 

Query: 20  MDEIIRVFNKFDKNGDGKISVTELAA---ALGELSGNXXXXXXXXXXXXXXXXXXXXXXX 79
           M E+ +VF ++D NGDGKIS  ELA+   ALG   G                        
Sbjct: 3   MAELEQVFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEF 62

Query: 80  XXXXXXXXXXTGG------------NKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKC 139
                      GG              +L++AF +YD D NG ISA+ELH VL++LG+KC
Sbjct: 63  AAFHCGPTPAHGGKGGDAKDQEAASEAELREAFRMYDADSNGKISARELHRVLRQLGDKC 122

Query: 140 SLKDCCRMISSVDVDGDGHVNFEEFKKMM 154
           S+ DC RMI SVD DGDG VNF+EFKKMM
Sbjct: 123 SVADCSRMIRSVDADGDGCVNFDEFKKMM 151

[Close]
BLAST of CsGy3G020790 vs. Swiss-Prot
Match: sp|Q9C8Y1|CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.5e-21
Identity = 93/144 (64.58%), Postives = 107/144 (74.31%), Query Frame = 0 

Query: 15  SALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGN-----XXXXXXXXXXXXXXXX 74
           + LGSM++I +VF +FDKN DGKIS+ EL   +G LS N     XXXXXXXXXXXXXXXX
Sbjct: 8   NCLGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNAXXXXXXXXXXXXXXXXXXXX 67

Query: 75  XXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDC 134
           XXXXXXXXXXXXXXXXX               +D+NG ISA ELHSV+K LGEKCS++DC
Sbjct: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDRNGRISANELHSVMKNLGEKCSIQDC 127

Query: 135 CRMISSVDVDGDGHVNFEEFKKMM 154
            RMI+ VD DGDG V+FEEFKKMM
Sbjct: 128 QRMINKVDSDGDGCVDFEEFKKMM 151

[Close]
BLAST of CsGy3G020790 vs. TrEMBL
Match: tr|A0A0A0LCM1|A0A0A0LCM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G319280 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.6e-58
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 1   MAKNNSLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXX 60
           MAKNNSLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXX
Sbjct: 1   MAKNNSLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRL 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRL 120

Query: 121 GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 157
           GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 121 GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 156

[Close]
BLAST of CsGy3G020790 vs. TrEMBL
Match: tr|A0A1S3C5W9|A0A1S3C5W9_CUCME (probable calcium-binding protein CML27 OS=Cucumis melo OX=3656 GN=LOC103496821 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 6.1e-55
Identity = 144/157 (91.72%), Postives = 147/157 (93.63%), Query Frame = 0 

Query: 1   MAKNN-SLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNXXXXXX 60
           MA NN SLSISTPGSS+LGSMDE+IRVFNKFDKNGDGKISV+EL AALGELSGN XXXXX
Sbjct: 1   MANNNPSLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNIXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120
           XXXXXXXXXXXXXXXXXXXXX      TGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXDFTSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 120

Query: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 157
           LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 121 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 157

[Close]
BLAST of CsGy3G020790 vs. TrEMBL
Match: tr|A0A061EGG0|A0A061EGG0_THECC (Calmodulin like 23, putative OS=Theobroma cacao OX=3641 GN=TCM_019204 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.7e-31
Identity = 102/151 (67.55%), Postives = 114/151 (75.50%), Query Frame = 0 

Query: 14  SSALGSMDEIIRVFNKFDKNGDGKISVTEL---AAALGELSGNXXXXXXXXXXXXXXXXX 73
           +S LGSM+E+  VFNKFDKNGDGKIS  EL    +ALG    + XXXXXXXXXXXXXXXX
Sbjct: 2   ASPLGSMEEMKEVFNKFDKNGDGKISRDELKSILSALGSPPSSDXXXXXXXXXXXXXXXX 61

Query: 74  XXXXXXXXXXXXXXXXTG-----GNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCS 133
           XXXXX            G     GNK+L+DAFD+YD+DKNGLISA ELH+VLKRLGEKCS
Sbjct: 62  XXXXXFIAFHGTNINGNGDDSQCGNKELKDAFDMYDLDKNGLISANELHAVLKRLGEKCS 121

Query: 134 LKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 157
           L DC RMIS VD DGDG+VNFEEFKKMMT +
Sbjct: 122 LSDCRRMISQVDKDGDGNVNFEEFKKMMTNA 152

[Close]
BLAST of CsGy3G020790 vs. TrEMBL
Match: tr|A0A2P5BY36|A0A2P5BY36_PARAD (Parvalbumin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_200320 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.7e-31
Identity = 94/167 (56.29%), Postives = 108/167 (64.67%), Query Frame = 0 

Query: 1   MAKNNSLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAA---ALGELSGN---- 60
           MAK +S+S S P  S+LG+MD++ +VFNKFD NGDG+IS  EL     ALG  +      
Sbjct: 1   MAKKSSVS-SEP--SSLGTMDDVRKVFNKFDSNGDGRISCDELRGMLLALGSKTSTEXXX 60

Query: 61  -----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGNKDLQDAFDLYDIDKNGLI 120
                XXXXXXXXX                          GNK+L+DAFDLYD+DKNGLI
Sbjct: 61  XXXXXXXXXXXXXXDLKEFAEFHSGSEADQCGGDGAAAAAGNKELKDAFDLYDLDKNGLI 120

Query: 121 SAKELHSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTR 156
           SA ELH+V+KRLGEKCSL DC RMI SVD DGDG VNFEEFKKMMTR
Sbjct: 121 SASELHAVMKRLGEKCSLSDCSRMIRSVDADGDGSVNFEEFKKMMTR 164

[Close]
BLAST of CsGy3G020790 vs. TrEMBL
Match: tr|I1JHX0|I1JHX0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100796491 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.1e-31
Identity = 109/138 (78.99%), Postives = 120/138 (86.96%), Query Frame = 0 

Query: 22  EIIRVFNKFDKNGDGKISVTEL---AAALGELSGNXXXXXXXXXXXXXXXXXXXXXXXXX 81
           E+ ++FNKFDKNGDGKISVTEL    AALG  +  XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 4   EVRQIFNKFDKNGDGKISVTELKDMLAALGSKTTXXXXXXXXXXXXXXXXXXXXXXXXXX 63

Query: 82  XXXXXXXXTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCRMISSVDV 141
           XXXXXXX    +K+L+DAFDLYD+DKNGLISAKELH VL+ LGEKCSL DC RMIS+VD 
Sbjct: 64  XXXXXXXGKDDSKELRDAFDLYDVDKNGLISAKELHDVLRNLGEKCSLSDCRRMISNVDA 123

Query: 142 DGDGHVNFEEFKKMMTRS 157
           DGDG+VNFEEFKKMMTRS
Sbjct: 124 DGDGNVNFEEFKKMMTRS 141

The following BLAST results are available for this feature:
BLAST of CsGy3G020790 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004145834.14.0e-58100.00PREDICTED: probable calcium-binding protein CML23 [Cucumis sativus] >KGN57816.1 ... [more]
XP_008457051.19.1e-5591.72PREDICTED: probable calcium-binding protein CML27 [Cucumis melo][more]
XP_022143269.11.5e-4483.97probable calcium-binding protein CML23 [Momordica charantia][more]
XP_022948508.11.5e-4480.63probable calcium-binding protein CML23 [Cucurbita moschata] >XP_023524703.1 prob... [more]
XP_022998716.14.3e-4480.00probable calcium-binding protein CML23 [Cucurbita maxima][more]
BLAST of CsGy3G020790 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G18210.15.2e-2844.52Calcium-binding EF-hand family protein[more]
AT1G73630.16.0e-2464.83EF hand calcium-binding protein family[more]
AT1G66400.11.9e-2264.58calmodulin like 23[more]
AT1G24620.11.6e-2141.91EF hand calcium-binding protein family[more]
AT2G15680.16.8e-2048.70Calcium-binding EF-hand family protein[more]
BLAST of CsGy3G020790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LE22|CML27_ARATH9.4e-2744.52Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 ... [more]
sp|Q9M7R0|ALL8_OLEEU1.3e-2345.00Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1[more]
sp|Q9C9U8|CML26_ARATH1.1e-2264.83Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 ... [more]
sp|Q0DJV6|CML18_ORYSJ9.1e-2242.28Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q9C8Y1|CML23_ARATH3.5e-2164.58Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 ... [more]
BLAST of CsGy3G020790 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LCM1|A0A0A0LCM1_CUCSA2.6e-58100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G319280 PE=4 SV=1[more]
tr|A0A1S3C5W9|A0A1S3C5W9_CUCME6.1e-5591.72probable calcium-binding protein CML27 OS=Cucumis melo OX=3656 GN=LOC103496821 P... [more]
tr|A0A061EGG0|A0A061EGG0_THECC4.7e-3167.55Calmodulin like 23, putative OS=Theobroma cacao OX=3641 GN=TCM_019204 PE=4 SV=1[more]
tr|A0A2P5BY36|A0A2P5BY36_PARAD4.7e-3156.29Parvalbumin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_200320 PE=4 SV=1[more]
tr|I1JHX0|I1JHX0_SOYBN6.1e-3178.99Uncharacterized protein OS=Glycine max OX=3847 GN=100796491 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G020790.1CsGy3G020790.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 92..120
e-value: 3.2E-5
score: 33.4
coord: 58..86
e-value: 2.1E-5
score: 34.0
coord: 22..50
e-value: 2.4E-5
score: 33.8
coord: 128..156
e-value: 2.1E-4
score: 30.6
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 91..153
e-value: 1.4E-11
score: 44.6
coord: 22..83
e-value: 4.5E-14
score: 52.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 88..123
score: 14.318
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 18..53
score: 14.569
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 124..156
score: 13.174
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 54..82
score: 9.966
IPR002048EF-hand domainCDDcd00051EFhcoord: 92..154
e-value: 3.01624E-18
score: 73.7361
IPR002048EF-hand domainCDDcd00051EFhcoord: 22..82
e-value: 8.63646E-17
score: 69.8841
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 14..87
e-value: 1.7E-20
score: 75.7
NoneNo IPR availableGENE3DG3DSA:1.10.238.10coord: 88..156
e-value: 4.1E-23
score: 83.3
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 12..156
NoneNo IPR availablePANTHERPTHR10891:SF698CALCIUM-BINDING PROTEIN CML26-RELATEDcoord: 12..156
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 137..149
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 101..113
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 31..43
IPR011992EF-hand domain pairSUPERFAMILYSSF47473EF-handcoord: 20..155