MELO3C019896 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019896
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	40S ribosomal protein S25, putative
Location	chr3 : 21241451 .. 21243461 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCTTCGGACTTCTTCCCTCTTTCCCTTCCAGCCGAAGCCCTTGGAACTCCTTCACTCAAACCCTAGAAACCAAATCTCATGGTGAGTTTCTTTCCTCTTTTGTTTATTCGAATAGTTTGTTCTTCCTTCTGATTCTCGTTTCGTCTTTGTAACTTCCGATGTACTGATTATACATGATGTGATGTCGTTTCGTTTGTTGTCATCGTTTTGAATCTTAGGCGCCGAAGAAGGACAAGGCTCCTCCACCGTCCTCTAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGGTAAGCTTCTTAAATTTAAGTTCTGCTTGCTCCTTCATGATTAGTATGCCAATACTTGCTTATCTCATCGTTCAAGATCATTAGGTAAGATTTAATCGTTTTAATTTCCTCGTGTTACTGCATTGCTAGCGTTAAGTGCTCTTTCCGAAGTTAGTATCGTTGTATTTTATTTCGATACTGGAATTTGGAATTATCTTTTGTAATTTGATCTTTTTATGTCGTGTAGCATATAATTTTTTCGTCATACTGATAATGAGATAGTGACGTATATATTCGATTAGAATTAGAATGAAGGGACGATAAAAACCTTGAAAAATACAAGAGATTTTTGAAAGTTGGTGATGTTTGTTGAGTTTGAGGAAGAGTTTGCTTGTAATATGGCCATTATTGTTATTTTACATGTCATTTGGTTTGCAGAAATGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGGACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGATTGAGGGTATGTCTTTTTTTTTAATTTTTTTTCTGTTTCCATCCATCAATTCCCCAATTTTATTGATTTATTTTTTTGTTCGTGTTTAGAATATATTGTAAAGAAGTTGAGATTTGTCCAAACCTATCAAAATGAGTTTTGAAATGTAGTGGTGATTGGACTGGTGATTCCTAAGGTTTTTAATTAATTAAAAAAGAGCCCCACCTAGTTAAGTGTACTGATGACCATGAAATTTATGCTCAAGACCCCCTTGAAAATCAAGCCAATAAACATCCCTTCTACTTCTAAATTTCTTTGCTTTTGTTATCTACTTTCTACCTTTACTTTGAAAAACCAAGTGAGGGTTTGAGAGCTAGAAAAAGTTGTTTTTTACAAATCTGCTTTTGTTTTTGGCAAGGGTTTTTAAAATATTGGTATTGAATGAGTGTTTATAAGCCTAAGAAAGCAAGGAATTTATATGTGGAATGAGTGTTTGTAGGCTTAATTTTCAAAAACTTGTATTTATACGTGGAAGGAGTGTAAGTGTGTATAGGCTTAATTTGAATTTAGACGCGGGATGAGGGTTTATAGGCGTAATTTTCAAAAACTAAAAATCATTAAGACAGACCTAAAGTGTTTTCCAAATGATTGACTGACTTATCCTGATAGCACCTTCTACAGCAATTCACTAATGGTTTCCTTTGTCATGTACAATTACCAGATCAATGGATCATTAGCACGAAGAGCAATTAAGGATTTGATGGCTCGAGGTTCCATCAGAATGATATCGGCTCACTCGAGTCAGCAGATCTACACCAGAGCAACCAACACCTAAGGACAACAATTCATTTCACTTATGCCCGAGAGGGTATATAATAGATATGTAGTTGCCTTTCCATTTTGCAAGTCCAAATTTTGTTGAGTGATCAAATTATCATTTTAGTCTGTTAACGGCAGAATGAACTCTAAAAGAGACGTTTTTAATTTGTTAATGTGCACGAATTTGTTTGCGGTGCGGGTCTTAACTTGTGTGATGAATTGTGTCGCATTGGCTGTTGCCTGCCTTTTCTCTTTCCTACTGCCAAGTACTAATCATAATGTTTGTATGTAGAATCTCGTTTTAGATGAAAGTTGGTAATCCAACGTGGCTTTGACATTAGCGTTGTTTGAACAATTCTTGGATTTCGTTTC

mRNA sequence

ACCCTTCGGACTTCTTCCCTCTTTCCCTTCCAGCCGAAGCCCTTGGAACTCCTTCACTCAAACCCTAGAAACCAAATCTCATGGCGCCGAAGAAGGACAAGGCTCCTCCACCGTCCTCTAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGGACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGATTGAGGATCAATGGATCATTAGCACGAAGAGCAATTAAGGATTTGATGGCTCGAGGTTCCATCAGAATGATATCGGCTCACTCGAGTCAGCAGATCTACACCAGAGCAACCAACACCTAAGGACAACAATTCATTTCACTTATGCCCGAGAGGGTATATAATAGATATGTAGTTGCCTTTCCATTTTGCAAGTCCAAATTTTGTTGAGTGATCAAATTATCATTTTAGTCTGTTAACGGCAGAATGAACTCTAAAAGAGACGTTTTTAATTTGTTAATGTGCACGAATTTGTTTGCGGTGCGGGTCTTAACTTGTGTGATGAATTGTGTCGCATTGGCTGTTGCCTGCCTTTTCTCTTTCCTACTGCCAAGTACTAATCATAATGTTTGTATGTAGAATCTCGTTTTAGATGAAAGTTGGTAATCCAACGTGGCTTTGACATTAGCGTTGTTTGAACAATTCTTGGATTTCGTTTC

Coding sequence (CDS)

ATGGCGCCGAAGAAGGACAAGGCTCCTCCACCGTCCTCTAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGGACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGATTGAGGATCAATGGATCATTAGCACGAAGAGCAATTAAGGATTTGATGGCTCGAGGTTCCATCAGAATGATATCGGCTCACTCGAGTCAGCAGATCTACACCAGAGCAACCAACACCTAA

Protein sequence

MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT*

Homology

[Close]

BLAST of MELO3C019896 vs. Swiss-Prot
Match: RS252_ARATH (40S ribosomal protein S25-2 OS=Arabidopsis thaliana GN=RPS25B PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 2.9e-51
Identity = 97/108 (89.81%), Postives = 103/108 (95.37%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. Swiss-Prot
Match: RS253_ARATH (40S ribosomal protein S25-3 OS=Arabidopsis thaliana GN=RPS25D PE=3 SV=2)

HSP 1 Score: 199.1 bits (505), Expect = 2.4e-50
Identity = 96/107 (89.72%), Postives = 102/107 (95.33%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATN 108
           +TPSILSDRLRINGSLARRAI++LMA+G+IRM+SAHSSQQIYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]

BLAST of MELO3C019896 vs. Swiss-Prot
Match: RS25_SOLLC (40S ribosomal protein S25 OS=Solanum lycopersicum GN=RPS25 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.4e-50
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLLSE PKYKL
Sbjct: 1   MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPS+LSDRLRI+GSLAR+AI+DLMARGSIRM+SAH+SQQIYTRATNT
Sbjct: 61  ITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. Swiss-Prot
Match: RS254_ARATH (40S ribosomal protein S25-4 OS=Arabidopsis thaliana GN=RPS25E PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 3.2e-50
Identity = 95/108 (87.96%), Postives = 102/108 (94.44%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. Swiss-Prot
Match: RS251_ARATH (40S ribosomal protein S25-1 OS=Arabidopsis thaliana GN=RPS25A PE=3 SV=3)

HSP 1 Score: 191.8 bits (486), Expect = 3.9e-48
Identity = 92/106 (86.79%), Postives = 98/106 (92.45%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+SE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRAT 107
           +TPSILSDRLRINGSLAR+AI+DLM +G+IRM+S HSSQQI TRAT
Sbjct: 61  ITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 106

[Close]

BLAST of MELO3C019896 vs. TrEMBL
Match: A0A0A0KB40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G045180 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.2e-53
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDR+R+NGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. TrEMBL
Match: B9SCV0_RICCO (40S ribosomal protein S25, putative OS=Ricinus communis GN=RCOM_1281730 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.0e-52
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDRLRINGSLARRAIKDLMARGSIRMISAH+SQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. TrEMBL
Match: A0A067JDX0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03002 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.0e-52
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNM+LFDQ TYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMILFDQATYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAH+SQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. TrEMBL
Match: A0A067JTK0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21007 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.3e-52
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNM+LFDQ TYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMILFDQATYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLR+NGSLARRAIKDLMARGSIRMISAH+SQQIYTRATNT
Sbjct: 61  VTPSILSDRLRVNGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. TrEMBL
Match: A0A067JTS7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21008 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 6.9e-52
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAH+SQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. TAIR10
Match: AT2G21580.1 (AT2G21580.1 Ribosomal protein S25 family protein)

HSP 1 Score: 202.2 bits (513), Expect = 1.6e-52
Identity = 97/108 (89.81%), Postives = 103/108 (95.37%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. TAIR10
Match: AT4G34555.1 (AT4G34555.1 Ribosomal protein S25 family protein)

HSP 1 Score: 199.1 bits (505), Expect = 1.4e-51
Identity = 96/107 (89.72%), Postives = 102/107 (95.33%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATN 108
           +TPSILSDRLRINGSLARRAI++LMA+G+IRM+SAHSSQQIYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]

BLAST of MELO3C019896 vs. TAIR10
Match: AT4G39200.1 (AT4G39200.1 Ribosomal protein S25 family protein)

HSP 1 Score: 198.7 bits (504), Expect = 1.8e-51
Identity = 95/108 (87.96%), Postives = 102/108 (94.44%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. TAIR10
Match: AT2G16360.1 (AT2G16360.1 Ribosomal protein S25 family protein)

HSP 1 Score: 136.0 bits (341), Expect = 1.4e-32
Identity = 66/83 (79.52%), Postives = 74/83 (89.16%), Query Frame = 1


Query: 24  KKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLVTPSILSDRLRINGSLARRAIKD 83
           + +K SKGKQKEKVNNMVLFDQ TYDKL+SE PK+KL+TPSILSDRLRINGSLAR+AI+D
Sbjct: 40  ESRKRSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKLITPSILSDRLRINGSLARKAIRD 99

Query: 84  LMARGSIRMISAHSSQQIYTRAT 107
           LM +G+IRM+S HSSQQI TRAT
Sbjct: 100 LMVKGTIRMVSTHSSQQINTRAT 122

[Close]

BLAST of MELO3C019896 vs. NCBI nr
Match: gi|659113490|ref|XP_008456601.1| (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo])

HSP 1 Score: 215.7 bits (548), Expect = 4.0e-53
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. NCBI nr
Match: gi|449446287|ref|XP_004140903.1| (PREDICTED: 40S ribosomal protein S25-2 [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 9.0e-53
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDR+R+NGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. NCBI nr
Match: gi|802774697|ref|XP_012090801.1| (PREDICTED: 40S ribosomal protein S25 [Jatropha curcas])

HSP 1 Score: 211.8 bits (538), Expect = 5.8e-52
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNM+LFDQ TYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMILFDQATYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAH+SQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. NCBI nr
Match: gi|255565659|ref|XP_002523819.1| (PREDICTED: 40S ribosomal protein S25 [Ricinus communis])

HSP 1 Score: 211.8 bits (538), Expect = 5.8e-52
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDRLRINGSLARRAIKDLMARGSIRMISAH+SQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 108

[Close]

BLAST of MELO3C019896 vs. NCBI nr
Match: gi|657997509|ref|XP_008391134.1| (PREDICTED: 40S ribosomal protein S25-like [Malus domestica])

HSP 1 Score: 211.8 bits (538), Expect = 5.8e-52
Identity = 104/108 (96.30%), Postives = 108/108 (100.00%), Query Frame = 1


Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDRLRINGSLARRAIKDLMARGSIR+I+AH+SQQIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLIAAHASQQIYTRATNT 108

The following BLAST results are available for this feature:

BLAST of MELO3C019896 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RS252_ARATH	2.9e-51	89.81	40S ribosomal protein S25-2 OS=Arabidopsis thaliana GN=RPS25B PE=2 SV=1	[more]
RS253_ARATH	2.4e-50	89.72	40S ribosomal protein S25-3 OS=Arabidopsis thaliana GN=RPS25D PE=3 SV=2	[more]
RS25_SOLLC	2.4e-50	88.89	40S ribosomal protein S25 OS=Solanum lycopersicum GN=RPS25 PE=3 SV=1	[more]
RS254_ARATH	3.2e-50	87.96	40S ribosomal protein S25-4 OS=Arabidopsis thaliana GN=RPS25E PE=2 SV=1	[more]
RS251_ARATH	3.9e-48	86.79	40S ribosomal protein S25-1 OS=Arabidopsis thaliana GN=RPS25A PE=3 SV=3	[more]

BLAST of MELO3C019896 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB40_CUCSA	6.2e-53	98.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G045180 PE=4 SV=1	[more]
B9SCV0_RICCO	4.0e-52	97.22	40S ribosomal protein S25, putative OS=Ricinus communis GN=RCOM_1281730 PE=4 SV=...	[more]
A0A067JDX0_JATCU	4.0e-52	97.22	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03002 PE=4 SV=1	[more]
A0A067JTK0_JATCU	5.3e-52	96.30	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21007 PE=4 SV=1	[more]
A0A067JTS7_JATCU	6.9e-52	97.22	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21008 PE=4 SV=1	[more]

BLAST of MELO3C019896 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21580.1	1.6e-52	89.81	Ribosomal protein S25 family protein	[more]
AT4G34555.1	1.4e-51	89.72	Ribosomal protein S25 family protein	[more]
AT4G39200.1	1.8e-51	87.96	Ribosomal protein S25 family protein	[more]
AT2G16360.1	1.4e-32	79.52	Ribosomal protein S25 family protein	[more]

BLAST of MELO3C019896 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113490\|ref\|XP_008456601.1\|	4.0e-53	100.00	PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo]	[more]
gi\|449446287\|ref\|XP_004140903.1\|	9.0e-53	98.15	PREDICTED: 40S ribosomal protein S25-2 [Cucumis sativus]	[more]
gi\|802774697\|ref\|XP_012090801.1\|	5.8e-52	97.22	PREDICTED: 40S ribosomal protein S25 [Jatropha curcas]	[more]
gi\|255565659\|ref\|XP_002523819.1\|	5.8e-52	97.22	PREDICTED: 40S ribosomal protein S25 [Ricinus communis]	[more]
gi\|657997509\|ref\|XP_008391134.1\|	5.8e-52	96.30	PREDICTED: 40S ribosomal protein S25-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004977	Ribosomal_S25
IPR004977	Ribosomal_S25

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU47782	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019896T2	MELO3C019896T2	mRNA
MELO3C019896T1	MELO3C019896T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU47782	MU47782	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004977	Ribosomal protein S25	PRODOM	PD012268		coord: 20..87 score: 7.0
IPR004977	Ribosomal protein S25	PANTHER	PTHR12850	FAMILY NOT NAMED	coord: 7..88 score: 6.7
IPR004977	Ribosomal protein S25	PFAM	PF03297	Ribosomal_S25	coord: 6..85 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C019896	Csa6G045180	Cucumber (Chinese Long) v2	cumeB474
MELO3C019896	Cla013693	Watermelon (97103) v1	mewmB308
MELO3C019896	ClCG08G008280	Watermelon (Charleston Gray)	mewcgB300
MELO3C019896	Cla97C08G151020	Watermelon (97103) v2	mewmbB307
MELO3C019896	Bhi04G001322	Wax gourd	mewgoB326
MELO3C019896	CSPI06G03970	Wild cucumber (PI 183967)	cpimeB473
MELO3C019896	Cucsa.364650	Cucumber (Gy14) v1	cgymeB588
MELO3C019896	CmoCh04G026370	Cucurbita moschata (Rifu)	cmomeB667
MELO3C019896	CmoCh15G005300	Cucurbita moschata (Rifu)	cmomeB262
MELO3C019896	Lsi08G006460	Bottle gourd (USVL1VR-Ls)	lsimeB470
MELO3C019896	Cp4.1LG01g25120	Cucurbita pepo (Zucchini)	cpemeB396
MELO3C019896	CsGy6G003940	Cucumber (Gy14) v2	cgybmeB415
MELO3C019896	Carg01677	Silver-seed gourd	carmeB0823
MELO3C019896	Carg04622	Silver-seed gourd	carmeB0686
MELO3C019896	CsaV3_6G004250	Cucumber (Chinese Long) v3	cucmeB484

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019896	Cucurbita pepo (Zucchini)	cpemeB164
MELO3C019896	Cucurbita maxima (Rimu)	cmameB271
MELO3C019896	Cucurbita maxima (Rimu)	cmameB675