Cucsa.364650 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTTCTTTCCCTTCCAGCCGAAGCCCTTGGAACTCTTCACTCAAACCCTAGAAACCAAATCTCATGGTGAGTTTCTTTCCTCTTGCCGATTCGATGAACTTGTTCTTCCCTTTGATTCTTCTTTCGTCTTTGGAACTTCCGGTGTACTGATTCTACATGATGTGATATCTTTTGTTGTCTTCGTTTTGAATCTTAGGCGCCGAAGAAGGACAAGGCTCCTCCACCGTCCTCCAAACCTGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGGTAAGCTTTTTAAATTTAAGTTCTGCTAGCTGTTATATTATTAGTATGTTGATACTTGTTTAATCTCATCGTTCAGGATCATTAGATAAGATTTAGTCGTTTTAATTTCTTCTTGTTGATAGCATTAACTGCTCTTTTCGAAGTTTGCAGCGTTGTACTTTTTTTCGATACTGGAATTTGGAATTATCTTTAGTAATTTGATCTTCTTACGTCGTGTAGCATTTCGTTTTTtCGTCATACTGATAACGAGATAGTGACGTTTATATTTGATTAGAATTGGAATGAAAGGACGATAAAAACCAGTTAGGATAGGGACCCTAAACCTTGAAAAATACTATGAGATTTTTTAAGGATGGCGATGTTTATTGAGTTTGAGGAAGAGTTTGATTTTTGGTATTCATTGTAGTATGGCCATTCTTGTTATTTTACATGATCAGTATCACTTGGTTTGCAGAAATGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGAACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGAATGAGGGTATGTCTTTTTCTTCTTTTTCTATCCATCAATTTCCCAATTTTATTGAATTATTTTGTTGTTCTTGTTTAGAAAAaGTACAAATCTGCTTTTGTTTtCCGATGTGGAATGAGGGTTGTTAACACCTAAAGGGTTTACCAAATGACTGATTGATTTGTTACTAATTGCACCCTCTATAGCAATTTACTAATGGTTTCCTTTGCCATGTGCAATTACCAGGTTAATGGATCGCTAGCAAGAAGAGCAATTAAGGATTTGATGGCTAGAGGTTCCATCAGAATGATATCAGCTCACTCGAGTCAGCAGATCTACACCAGAGCAACCAACACCTAAGGACAACAATTCATGTCACTTATGCCCGAAAGGGTATATATGATATGTAGTTGCCTTTCCATTTTGCAATTCCAAATTTTGTTGAGTGATCAAATGAACTCTAAATGTGACGTTTTTAATTTGTTTGCGTTGCGGGTCTTGACTTGTTTGATGAATTGTGTCACATTAGCTGGTATTTGCCTTTTCTTTTCTACTGCCAAATACTAACAATAATGTTTGTATGTAGAATCTCGTTCTAGATGTAAGTTGGTAAACTAATGTGGCTCTGACATTAGCGTTGTTTGAACAATTCTTAGATTTCGTCTCACTATGTTGAGAAAAACAAGATGATTTCAGGGTCAGGTTTAATCTAAAATCTACTTTCAATA TCCTTCTTTCCCTTCCAGCCGAAGCCCTTGGAACTCTTCACTCAAACCCTAGAAACCAAATCTCATGGCGCCGAAGAAGGACAAGGCTCCTCCACCGTCCTCCAAACCTGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGAACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGAATGAGGGTTAATGGATCGCTAGCAAGAAGAGCAATTAAGGATTTGATGGCTAGAGGTTCCATCAGAATGATATCAGCTCACTCGAGTCAGCAGATCTACACCAGAGCAACCAACACCTAAGGACAACAATTCATGTCACTTATGCCCGAAAGGGTATATATGATATGTAGTTGCCTTTCCATTTTGCAATTCCAAATTTTGTTGAGTGATCAAATGAACTCTAAATGTGACGTTTTTAATTTGTTTGCGTTGCGGGTCTTGACTTGTTTGATGAATTGTGTCACATTAGCTGGTATTTGCCTTTTCTTTTCTACTGCCAAATACTAACAATAATGTTTGTATGTAGAATCTCGTTCTAGATGTAAGTTGGTAAACTAATGTGGCTCTGACATTAGCGTTGTTTGAACAATTCTTAGATTTCGTCTCACTATGTTGAGAAAAACAAGATGATTTCAGGGTCAGGTTTAATCTAAAATCTACTTTCAATA ATGGCGCCGAAGAAGGACAAGGCTCCTCCACCGTCCTCCAAACCTGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGAACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGAATGAGGGTTAATGGATCGCTAGCAAGAAGAGCAATTAAGGATTTGATGGCTAGAGGTTCCATCAGAATGATATCAGCTCACTCGAGTCAGCAGATCTACACCAGAGCAACCAACACCTAA MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLVTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT*
BLAST of Cucsa.364650 vs. Swiss-Prot
Match: RS252_ARATH (40S ribosomal protein S25-2 OS=Arabidopsis thaliana GN=RPS25B PE=2 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 1.7e-51 Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 1
BLAST of Cucsa.364650 vs. Swiss-Prot
Match: RS254_ARATH (40S ribosomal protein S25-4 OS=Arabidopsis thaliana GN=RPS25E PE=2 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 1.9e-50 Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 1
BLAST of Cucsa.364650 vs. Swiss-Prot
Match: RS25_SOLLC (40S ribosomal protein S25 OS=Solanum lycopersicum GN=RPS25 PE=3 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 5.4e-50 Identity = 94/108 (87.04%), Postives = 105/108 (97.22%), Query Frame = 1
BLAST of Cucsa.364650 vs. Swiss-Prot
Match: RS253_ARATH (40S ribosomal protein S25-3 OS=Arabidopsis thaliana GN=RPS25D PE=3 SV=2) HSP 1 Score: 198.0 bits (502), Expect = 5.4e-50 Identity = 94/107 (87.85%), Postives = 104/107 (97.20%), Query Frame = 1
BLAST of Cucsa.364650 vs. Swiss-Prot
Match: RS251_ARATH (40S ribosomal protein S25-1 OS=Arabidopsis thaliana GN=RPS25A PE=3 SV=3) HSP 1 Score: 190.7 bits (483), Expect = 8.7e-48 Identity = 90/106 (84.91%), Postives = 100/106 (94.34%), Query Frame = 1
BLAST of Cucsa.364650 vs. TrEMBL
Match: A0A0A0KB40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G045180 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 2.1e-53 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1
BLAST of Cucsa.364650 vs. TrEMBL
Match: A0A067JTK0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21007 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 6.9e-52 Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 1
BLAST of Cucsa.364650 vs. TrEMBL
Match: B9SCV0_RICCO (40S ribosomal protein S25, putative OS=Ricinus communis GN=RCOM_1281730 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 9.0e-52 Identity = 103/108 (95.37%), Postives = 107/108 (99.07%), Query Frame = 1
BLAST of Cucsa.364650 vs. TrEMBL
Match: A0A067JDX0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03002 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 9.0e-52 Identity = 103/108 (95.37%), Postives = 107/108 (99.07%), Query Frame = 1
BLAST of Cucsa.364650 vs. TrEMBL
Match: A0A067JTS7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21008 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 1.5e-51 Identity = 103/108 (95.37%), Postives = 107/108 (99.07%), Query Frame = 1
BLAST of Cucsa.364650 vs. TAIR10
Match: AT2G21580.1 (AT2G21580.1 Ribosomal protein S25 family protein) HSP 1 Score: 203.0 bits (515), Expect = 9.5e-53 Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 1
BLAST of Cucsa.364650 vs. TAIR10
Match: AT4G39200.1 (AT4G39200.1 Ribosomal protein S25 family protein) HSP 1 Score: 199.5 bits (506), Expect = 1.1e-51 Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 1
BLAST of Cucsa.364650 vs. TAIR10
Match: AT4G34555.1 (AT4G34555.1 Ribosomal protein S25 family protein) HSP 1 Score: 198.0 bits (502), Expect = 3.1e-51 Identity = 94/107 (87.85%), Postives = 104/107 (97.20%), Query Frame = 1
BLAST of Cucsa.364650 vs. TAIR10
Match: AT2G16360.1 (AT2G16360.1 Ribosomal protein S25 family protein) HSP 1 Score: 134.8 bits (338), Expect = 3.2e-32 Identity = 64/83 (77.11%), Postives = 76/83 (91.57%), Query Frame = 1
BLAST of Cucsa.364650 vs. NCBI nr
Match: gi|449446287|ref|XP_004140903.1| (PREDICTED: 40S ribosomal protein S25-2 [Cucumis sativus]) HSP 1 Score: 216.1 bits (549), Expect = 3.1e-53 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1
BLAST of Cucsa.364650 vs. NCBI nr
Match: gi|659113490|ref|XP_008456601.1| (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo]) HSP 1 Score: 214.5 bits (545), Expect = 9.0e-53 Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 1
BLAST of Cucsa.364650 vs. NCBI nr
Match: gi|802713424|ref|XP_012084672.1| (PREDICTED: 40S ribosomal protein S25-like [Jatropha curcas]) HSP 1 Score: 211.1 bits (536), Expect = 9.9e-52 Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 1
BLAST of Cucsa.364650 vs. NCBI nr
Match: gi|255565659|ref|XP_002523819.1| (PREDICTED: 40S ribosomal protein S25 [Ricinus communis]) HSP 1 Score: 210.7 bits (535), Expect = 1.3e-51 Identity = 103/108 (95.37%), Postives = 107/108 (99.07%), Query Frame = 1
BLAST of Cucsa.364650 vs. NCBI nr
Match: gi|657997509|ref|XP_008391134.1| (PREDICTED: 40S ribosomal protein S25-like [Malus domestica]) HSP 1 Score: 210.7 bits (535), Expect = 1.3e-51 Identity = 102/108 (94.44%), Postives = 108/108 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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