MELO3C019372 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019372
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Plastid transcriptionally active7
Location	chr6 : 8733707 .. 8735903 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATAGGACAGCCATGGCCACTCCAATCTCAACACTCTCCTTTGCTTCCCCTGTAATCACTCTCCCTGTTTGATTCTTCGTCCAATGGTGTCTGAAACTTTCATATGGATATTCTGTTTTATCCCTTCTTTTGATCTTTACTTTCTCTTTCAAAATTCGTCAGTCGTGCTCATGTTTGGGTTTTTTTTTTTTTCAGTTTTTGCCGCTCAGGATTGAGGCGAATCCCAGAATTTCTCCTGCCTTGAACTTCCGTCCCCCGTTTCAGGTTAACATTTCATTGGATTTCTCAACAACACTAACTTACTATTCTTCTCTTTTGCCTCTCACTCTTCGTGTTTTTCTTGTTTACGTTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGGTATGATGAATGTGTTCTATTCTTTCTCTTAATTTCTCCCCTACCCTTTTATTGTTTGTTTCTTTTGTCTCCCATTTCACGTCTTTCTGAAACTATAGTCTTGCAATGTTGGGCTAATTCGACCTAGATTCCATTACATGATGCAAAGAGTGAAGCTGTGAAAGGAACTTGGTTTTTTTAGGGATAGTTCTTGTATTACAACTGCCTGAAGCATGGGGAGTAGGAATTTCTCTCTTTCTTTCAGCGGCTCTTGTGAGTACAAGCATGCTCCTGCTTCTTGTTGGAGTGCATTACATAATCTTTTTATCATAACATACCATTTCTTTGATTAACCTATATTGGTTGCATTTCATTTGGTAACTTTCCTCTATCATGGCCTCTTGGTTCTCTTTCTATATTTATTTTTCCTTAATATATGGTTGCTTCTATTAAGAGAGAGAGAGATTTTGTTCATGCCTCCTCGTGGTTAGTGTTTGTATTGTATGTAAACTACAGTTTACAACAGAGATGTGTAAACTTTGGAAAAAGGTTATTTGGTCCTTTTGTGACGAATATTGGAGATGTTATGGCTTGTTATAGCATTTCTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTATTAATGCAACCCCATGGTTTTTCATTGATAACTATCTAAATGGGGGTGTGTCATTTATGATTCTTCTTTCCAATCGATCAAACTTTGGTGATTGCTGATAATTAGGTGTCACGGTGTGATTCCCGAGTAGGACATTCTTGCCTCTTTGGTCCTGACATTAGGATGCAAGCACTATAGATAGTCAAAAACATTAGAGTATGTGGGGTTCTGGGTTCATTGTAGTATTCAAATCCTACAAGTTTCTTAGTAACATGTTAGATCAGGCAGTTGTCTAGATGAAATTAGGCAAGATGTGTAAAACGGCTCTGATACTTCTTAGAAAAATAATTATATGGAATGCGCACTTAGTGTAGGATTAGGTGGAATAAAGGAAACATTAAGATGATCGATCACCTTCAACCAGACTTTTGCGGATCTCACTATTTGCTATTATTGGGATGCGAATTATGCAATATAATTTAGATGGAAAGGTTTAAATATTGGGAGTTTCTCGAAACAAATAGAATTCTGAGATCGTTCGGGATTATAGGCCACTTTCTGGCAGATCAAAATTTTTTCTTCCAAAATTGAAGAATGAAATCTTTTTTGATATAGAATGACTTTGGGGAGAATTACTTAAGATCATGTATGGTTATTTTGTGAGTTTGCTATGTTGTTGTTGTTGACATTGAAACTTCTAATTTCATTCCTTATTCAGACAAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGAAAGCTCATCACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTCAGCAACCGTGTGAACGATGCAGGGTTTTATAGGCCAGATGCTTATGCTGAAGATGACCCATTTAAACCGGGACCTCATTATCTGAAACAAGAATTTACTTGAACAATTTGATTACAAAATCCATTTTCTTATACAGACTGTCAATGCATTAATCTGATTTTTCCAGTCTTTAAATGTTAGTGCCTTTGTCTCTTCTGATTAAGAA

mRNA sequence

GAAGATAGGACAGCCATGGCCACTCCAATCTCAACACTCTCCTTTGCTTCCCCTGTAATCACTCTCCCTGTTTGATTCTTCGTCCAATGTTTTTGCCGCTCAGGATTGAGGCGAATCCCAGAATTTCTCCTGCCTTGAACTTCCGTCCCCCGTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGAAAGCTCATCACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTCAGCAACCGTGTGAACGATGCAGGGTTTTATAGGCCAGATGCTTATGCTGAAGATGACCCATTTAAACCGGGACCTCATTATCTGAAACAAGAATTTACTTGAACAATTTGATTACAAAATCCATTTTCTTATACAGACTGTCAATGCATTAATCTGATTTTTCCAGTCTTTAAATGTTAGTGCCTTTGTCTCTTCTGATTAAGAA

Coding sequence (CDS)

ATGTTTTTGCCGCTCAGGATTGAGGCGAATCCCAGAATTTCTCCTGCCTTGAACTTCCGTCCCCCGTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGAAAGCTCATCACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTCAGCAACCGTGTGAACGATGCAGGGTTTTATAGGCCAGATGCTTATGCTGAAGATGACCCATTTAAACCGGGACCTCATTATCTGAAACAAGAATTTACTTGA

Protein sequence

MFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT*

Homology

[Close]

BLAST of MELO3C019372 vs. Swiss-Prot
Match: PTA7_ARATH (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana GN=PTAC7 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.3e-48
Identity = 94/140 (67.14%), Postives = 108/140 (77.14%), Query Frame = 1


Query: 18  NFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI 77
           N R  FQ         + +GRRVWRRR LTKKDDM  YKM R+PF+EEQVR+++E GK++
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLTKKDDMLRYKMQRVPFVEEQVRKIREVGKVM 81

Query: 78  TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPD 137
           TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+
Sbjct: 82  TMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPE 141

Query: 138 AYAEDDPFKPGPHYLKQEFT 158
           AY E DP+KPGP YL + +T
Sbjct: 142 AYVEADPYKPGPGYLLEYYT 161

[Close]

BLAST of MELO3C019372 vs. TrEMBL
Match: A0A0A0L9J8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238200 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.1e-81
Identity = 151/155 (97.42%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 3   LPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 62
           LPLRIEANPRISPALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTKKDDMSIYKMDRIPF
Sbjct: 15  LPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 74

Query: 63  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 122
           LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGG+KKAILH
Sbjct: 75  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILH 134

Query: 123 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 158
           VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 135 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]

BLAST of MELO3C019372 vs. TrEMBL
Match: A0A058ZXU2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00396 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.1e-56
Identity = 107/144 (74.31%), Postives = 127/144 (88.19%), Query Frame = 1


Query: 14  SPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQ 73
           +PAL+ + P  V+++    G   GRRVWRRRKLTKKDD+  YKM+RIPFLEEQ R++KE 
Sbjct: 30  APALSSKAPLLVISQSGSRGR--GRRVWRRRKLTKKDDLLQYKMERIPFLEEQERKIKET 89

Query: 74  GKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGF 133
           GKL+TMDIERLLLSEDNRFDF+N+VAAEAKEYVE+NRDEYGG+KKAILHVLSNRVND+GF
Sbjct: 90  GKLLTMDIERLLLSEDNRFDFINDVAAEAKEYVENNRDEYGGTKKAILHVLSNRVNDSGF 149

Query: 134 YRPDAYAEDDPFKPGPHYLKQEFT 158
           YRP+AY+E DPF+PGP YLK+EFT
Sbjct: 150 YRPEAYSESDPFRPGPGYLKEEFT 171

[Close]

BLAST of MELO3C019372 vs. TrEMBL
Match: A0A061G1Y5_THECC (Plastid transcriptionally active7 isoform 1 OS=Theobroma cacao GN=TCM_015438 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 8.7e-56
Identity = 110/146 (75.34%), Postives = 129/146 (88.36%), Query Frame = 1


Query: 12  RISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVK 71
           R++P  N +   +VV+R +  G   GRRVWRRRKLTKKD+M  YK++RIPFLEEQVR+++
Sbjct: 30  RLNP--NLKCQCRVVSRFESEG--GGRRVWRRRKLTKKDEMLQYKLERIPFLEEQVRKIR 89

Query: 72  EQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDA 131
           E GKL+TMDIERLLLSEDNRFDFVN+VAAEAK+Y+ESNRDEYGG+KKAILHVLSNRVND+
Sbjct: 90  EGGKLLTMDIERLLLSEDNRFDFVNDVAAEAKDYIESNRDEYGGTKKAILHVLSNRVNDS 149

Query: 132 GFYRPDAYAEDDPFKPGPHYLKQEFT 158
           GFYRPDAYAE DPFKPGP YLK+EFT
Sbjct: 150 GFYRPDAYAESDPFKPGPTYLKEEFT 171

[Close]

BLAST of MELO3C019372 vs. TrEMBL
Match: A0A0B0MTV6_GOSAR (Putative nicotinate-nucleotide adenylyltransferase OS=Gossypium arboreum GN=F383_10117 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.5e-55
Identity = 108/134 (80.60%), Postives = 122/134 (91.04%), Query Frame = 1


Query: 24  QVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIER 83
           QVV+R +  G   GRRVWRRRKL KKD+M  YK++R+PFLEEQVR+++E GKL+TMDIER
Sbjct: 42  QVVSRLKSEG--GGRRVWRRRKLAKKDEMLQYKLERMPFLEEQVRKIREGGKLLTMDIER 101

Query: 84  LLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDD 143
           LLLSEDNRFDFVN+VAAEAKEYVE+NRDEYGGSKKAILHVLSNRVND+GFYRPDAYAE D
Sbjct: 102 LLLSEDNRFDFVNDVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDSGFYRPDAYAESD 161

Query: 144 PFKPGPHYLKQEFT 158
           PFKPGP YLK+EFT
Sbjct: 162 PFKPGPTYLKEEFT 173

[Close]

BLAST of MELO3C019372 vs. TrEMBL
Match: D7TAM0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g02390 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 9.7e-55
Identity = 107/131 (81.68%), Postives = 121/131 (92.37%), Query Frame = 1


Query: 24  QVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIER 83
           QV+++ QR+G   GRRVWRRRKLTKKDDM  YKMDRIPFLEE+VR+++E GKL+TMDIER
Sbjct: 34  QVISQLQRDGR--GRRVWRRRKLTKKDDMLRYKMDRIPFLEEKVRKIQEGGKLLTMDIER 93

Query: 84  LLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDD 143
           LLLSEDNRFDFVNEVAAEAKEYVE+NRDEYGG+KKAILHVLSNRVNDAGFYRPDAY E +
Sbjct: 94  LLLSEDNRFDFVNEVAAEAKEYVENNRDEYGGNKKAILHVLSNRVNDAGFYRPDAYMESE 153

Query: 144 PFKPGPHYLKQ 155
           P+KPGP YLK+
Sbjct: 154 PYKPGPGYLKE 162

[Close]

BLAST of MELO3C019372 vs. TAIR10
Match: AT5G24314.2 (AT5G24314.2 plastid transcriptionally active7)

HSP 1 Score: 185.3 bits (469), Expect = 3.0e-47
Identity = 94/148 (63.51%), Postives = 108/148 (72.97%), Query Frame = 1


Query: 18  NFRPPFQVVARKQRNGEVSGRRVWRRRKL--------TKKDDMSIYKMDRIPFLEEQVRR 77
           N R  FQ         + +GRRVWRRR L        TKKDDM  YKM R+PF+EEQVR+
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLVSTKLDILTKKDDMLRYKMQRVPFVEEQVRK 81

Query: 78  VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVN 137
           ++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVN
Sbjct: 82  IREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVN 141

Query: 138 DAGFYRPDAYAEDDPFKPGPHYLKQEFT 158
           D GF RP+AY E DP+KPGP YL + +T
Sbjct: 142 DLGFDRPEAYVEADPYKPGPGYLLEYYT 169

[Close]

BLAST of MELO3C019372 vs. NCBI nr
Match: gi|659111938|ref|XP_008455984.1| (PREDICTED: uncharacterized protein LOC103496049 [Cucumis melo])

HSP 1 Score: 317.4 bits (812), Expect = 1.4e-83
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1


Query: 2   FLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 61
           FLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP
Sbjct: 14  FLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 73

Query: 62  FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 121
           FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL
Sbjct: 74  FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 133

Query: 122 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 158
           HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 134 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]

BLAST of MELO3C019372 vs. NCBI nr
Match: gi|449456989|ref|XP_004146231.1| (PREDICTED: uncharacterized protein LOC101217841 [Cucumis sativus])

HSP 1 Score: 309.7 bits (792), Expect = 3.0e-81
Identity = 151/155 (97.42%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 3   LPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 62
           LPLRIEANPRISPALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTKKDDMSIYKMDRIPF
Sbjct: 15  LPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 74

Query: 63  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 122
           LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGG+KKAILH
Sbjct: 75  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILH 134

Query: 123 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 158
           VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 135 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]

BLAST of MELO3C019372 vs. NCBI nr
Match: gi|1009138528|ref|XP_015886635.1| (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 226.5 bits (576), Expect = 3.3e-56
Identity = 107/134 (79.85%), Postives = 125/134 (93.28%), Query Frame = 1


Query: 24  QVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIER 83
           Q+V++ +++G+  GRRVWRRRKLTKKDDM  YKM+R+PFLEEQVR+++E GKL+TMDIER
Sbjct: 39  QIVSQMKKDGK--GRRVWRRRKLTKKDDMLDYKMERVPFLEEQVRKIQEGGKLLTMDIER 98

Query: 84  LLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDD 143
           L+LSEDNRFDFVNE+AAEA EYVESNRDEYGGSKKAILHVLSNRVND+GFYRP+AYAE D
Sbjct: 99  LMLSEDNRFDFVNEIAAEANEYVESNRDEYGGSKKAILHVLSNRVNDSGFYRPEAYAESD 158

Query: 144 PFKPGPHYLKQEFT 158
           PFKPGP YLK+EFT
Sbjct: 159 PFKPGPSYLKEEFT 170

[Close]

BLAST of MELO3C019372 vs. NCBI nr
Match: gi|702489047|ref|XP_010035285.1| (PREDICTED: uncharacterized protein LOC104424523 [Eucalyptus grandis])

HSP 1 Score: 225.3 bits (573), Expect = 7.4e-56
Identity = 107/144 (74.31%), Postives = 127/144 (88.19%), Query Frame = 1


Query: 14  SPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQ 73
           +PAL+ + P  V+++    G   GRRVWRRRKLTKKDD+  YKM+RIPFLEEQ R++KE 
Sbjct: 30  APALSSKAPLLVISQSGSRGR--GRRVWRRRKLTKKDDLLQYKMERIPFLEEQERKIKET 89

Query: 74  GKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGF 133
           GKL+TMDIERLLLSEDNRFDF+N+VAAEAKEYVE+NRDEYGG+KKAILHVLSNRVND+GF
Sbjct: 90  GKLLTMDIERLLLSEDNRFDFINDVAAEAKEYVENNRDEYGGTKKAILHVLSNRVNDSGF 149

Query: 134 YRPDAYAEDDPFKPGPHYLKQEFT 158
           YRP+AY+E DPF+PGP YLK+EFT
Sbjct: 150 YRPEAYSESDPFRPGPGYLKEEFT 171

[Close]

BLAST of MELO3C019372 vs. NCBI nr
Match: gi|590674163|ref|XP_007039090.1| (Plastid transcriptionally active7 isoform 1 [Theobroma cacao])

HSP 1 Score: 224.6 bits (571), Expect = 1.3e-55
Identity = 110/146 (75.34%), Postives = 129/146 (88.36%), Query Frame = 1


Query: 12  RISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVK 71
           R++P  N +   +VV+R +  G   GRRVWRRRKLTKKD+M  YK++RIPFLEEQVR+++
Sbjct: 30  RLNP--NLKCQCRVVSRFESEG--GGRRVWRRRKLTKKDEMLQYKLERIPFLEEQVRKIR 89

Query: 72  EQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDA 131
           E GKL+TMDIERLLLSEDNRFDFVN+VAAEAK+Y+ESNRDEYGG+KKAILHVLSNRVND+
Sbjct: 90  EGGKLLTMDIERLLLSEDNRFDFVNDVAAEAKDYIESNRDEYGGTKKAILHVLSNRVNDS 149

Query: 132 GFYRPDAYAEDDPFKPGPHYLKQEFT 158
           GFYRPDAYAE DPFKPGP YLK+EFT
Sbjct: 150 GFYRPDAYAESDPFKPGPTYLKEEFT 171

The following BLAST results are available for this feature:

BLAST of MELO3C019372 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PTA7_ARATH	3.3e-48	67.14	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana GN=PTAC7 PE=1...	[more]

BLAST of MELO3C019372 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9J8_CUCSA	2.1e-81	97.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238200 PE=4 SV=1	[more]
A0A058ZXU2_EUCGR	5.1e-56	74.31	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00396 PE=4 SV=1	[more]
A0A061G1Y5_THECC	8.7e-56	75.34	Plastid transcriptionally active7 isoform 1 OS=Theobroma cacao GN=TCM_015438 PE=...	[more]
A0A0B0MTV6_GOSAR	2.5e-55	80.60	Putative nicotinate-nucleotide adenylyltransferase OS=Gossypium arboreum GN=F383...	[more]
D7TAM0_VITVI	9.7e-55	81.68	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g02390 PE=4 SV=...	[more]

BLAST of MELO3C019372 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24314.2	3.0e-47	63.51	plastid transcriptionally active7	[more]

BLAST of MELO3C019372 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111938\|ref\|XP_008455984.1\|	1.4e-83	100.00	PREDICTED: uncharacterized protein LOC103496049 [Cucumis melo]	[more]
gi\|449456989\|ref\|XP_004146231.1\|	3.0e-81	97.42	PREDICTED: uncharacterized protein LOC101217841 [Cucumis sativus]	[more]
gi\|1009138528\|ref\|XP_015886635.1\|	3.3e-56	79.85	PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Ziziphus jujub...	[more]
gi\|702489047\|ref\|XP_010035285.1\|	7.4e-56	74.31	PREDICTED: uncharacterized protein LOC104424523 [Eucalyptus grandis]	[more]
gi\|590674163\|ref\|XP_007039090.1\|	1.3e-55	75.34	Plastid transcriptionally active7 isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
biological_process	GO:0042793	transcription from plastid promoter
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU49805	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019372T1	MELO3C019372T1	mRNA
MELO3C019372T2	MELO3C019372T2	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU49805	MU49805	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37257	FAMILY NOT NAMED	coord: 42..169 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C019372	Csa3G238200	Cucumber (Chinese Long) v2	cumeB166
MELO3C019372	Cla004268	Watermelon (97103) v1	mewmB461
MELO3C019372	ClCG05G009050	Watermelon (Charleston Gray)	mewcgB427
MELO3C019372	Cla97C05G091370	Watermelon (97103) v2	mewmbB434
MELO3C019372	CSPI03G19680	Wild cucumber (PI 183967)	cpimeB241
MELO3C019372	Cucsa.032280	Cucumber (Gy14) v1	cgymeB002
MELO3C019372	CmoCh16G000440	Cucurbita moschata (Rifu)	cmomeB289
MELO3C019372	CsGy3G019600	Cucumber (Gy14) v2	cgybmeB210
MELO3C019372	CsaV3_3G019730	Cucumber (Chinese Long) v3	cucmeB247

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019372	Cucumber (Chinese Long) v3	cucmeB256
MELO3C019372	Cucumber (Chinese Long) v3	cucmeB416
MELO3C019372	Watermelon (97103) v2	mewmbB425
MELO3C019372	Watermelon (97103) v2	mewmbB437
MELO3C019372	Wax gourd	mewgoB517
MELO3C019372	Wax gourd	mewgoB530
MELO3C019372	Melon (DHL92) v3.5.1	memeB016
MELO3C019372	Melon (DHL92) v3.5.1	memeB150
MELO3C019372	Cucumber (Gy14) v1	cgymeB368
MELO3C019372	Cucumber (Gy14) v1	cgymeB438
MELO3C019372	Cucurbita maxima (Rimu)	cmameB376
MELO3C019372	Cucurbita maxima (Rimu)	cmameB280
MELO3C019372	Cucurbita maxima (Rimu)	cmameB296
MELO3C019372	Cucurbita maxima (Rimu)	cmameB375
MELO3C019372	Cucurbita maxima (Rimu)	cmameB579
MELO3C019372	Cucurbita moschata (Rifu)	cmomeB272
MELO3C019372	Cucurbita moschata (Rifu)	cmomeB369
MELO3C019372	Cucurbita moschata (Rifu)	cmomeB368
MELO3C019372	Cucurbita moschata (Rifu)	cmomeB567
MELO3C019372	Wild cucumber (PI 183967)	cpimeB249
MELO3C019372	Wild cucumber (PI 183967)	cpimeB404
MELO3C019372	Watermelon (Charleston Gray)	mewcgB423
MELO3C019372	Watermelon (97103) v1	mewmB470
MELO3C019372	Watermelon (97103) v1	mewmB482
MELO3C019372	Cucurbita pepo (Zucchini)	cpemeB039
MELO3C019372	Cucurbita pepo (Zucchini)	cpemeB043
MELO3C019372	Cucurbita pepo (Zucchini)	cpemeB176
MELO3C019372	Cucurbita pepo (Zucchini)	cpemeB193
MELO3C019372	Cucurbita pepo (Zucchini)	cpemeB701
MELO3C019372	Bottle gourd (USVL1VR-Ls)	lsimeB035
MELO3C019372	Bottle gourd (USVL1VR-Ls)	lsimeB368
MELO3C019372	Bottle gourd (USVL1VR-Ls)	lsimeB375
MELO3C019372	Cucumber (Gy14) v2	cgybmeB218
MELO3C019372	Cucumber (Gy14) v2	cgybmeB354
MELO3C019372	Silver-seed gourd	carmeB0513
MELO3C019372	Silver-seed gourd	carmeB0544
MELO3C019372	Silver-seed gourd	carmeB0546
MELO3C019372	Silver-seed gourd	carmeB0966