MELO3C019372T2 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019372T2
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Plastid transcriptionally active7
Location	chr6 : 8733707 .. 8735903 (+)
Sequence length	628

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATAGGACAGCCATGGCCACTCCAATCTCAACACTCTCCTTTGCTTCCCCTGTAATCACTCTCCCTGTTTGATTCTTCGTCCAATGGTGTCTGAAACTTTCATATGGATATTCTGTTTTATCCCTTCTTTTGATCTTTACTTTCTCTTTCAAAATTCGTCAGTCGTGCTCATGTTTGGGTTTTTTTTTTTTTCAGTTTTTGCCGCTCAGGATTGAGGCGAATCCCAGAATTTCTCCTGCCTTGAACTTCCGTCCCCCGTTTCAGGTTAACATTTCATTGGATTTCTCAACAACACTAACTTACTATTCTTCTCTTTTGCCTCTCACTCTTCGTGTTTTTCTTGTTTACGTTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGGTATGATGAATGTGTTCTATTCTTTCTCTTAATTTCTCCCCTACCCTTTTATTGTTTGTTTCTTTTGTCTCCCATTTCACGTCTTTCTGAAACTATAGTCTTGCAATGTTGGGCTAATTCGACCTAGATTCCATTACATGATGCAAAGAGTGAAGCTGTGAAAGGAACTTGGTTTTTTTAGGGATAGTTCTTGTATTACAACTGCCTGAAGCATGGGGAGTAGGAATTTCTCTCTTTCTTTCAGCGGCTCTTGTGAGTACAAGCATGCTCCTGCTTCTTGTTGGAGTGCATTACATAATCTTTTTATCATAACATACCATTTCTTTGATTAACCTATATTGGTTGCATTTCATTTGGTAACTTTCCTCTATCATGGCCTCTTGGTTCTCTTTCTATATTTATTTTTCCTTAATATATGGTTGCTTCTATTAAGAGAGAGAGAGATTTTGTTCATGCCTCCTCGTGGTTAGTGTTTGTATTGTATGTAAACTACAGTTTACAACAGAGATGTGTAAACTTTGGAAAAAGGTTATTTGGTCCTTTTGTGACGAATATTGGAGATGTTATGGCTTGTTATAGCATTTCTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTATTAATGCAACCCCATGGTTTTTCATTGATAACTATCTAAATGGGGGTGTGTCATTTATGATTCTTCTTTCCAATCGATCAAACTTTGGTGATTGCTGATAATTAGGTGTCACGGTGTGATTCCCGAGTAGGACATTCTTGCCTCTTTGGTCCTGACATTAGGATGCAAGCACTATAGATAGTCAAAAACATTAGAGTATGTGGGGTTCTGGGTTCATTGTAGTATTCAAATCCTACAAGTTTCTTAGTAACATGTTAGATCAGGCAGTTGTCTAGATGAAATTAGGCAAGATGTGTAAAACGGCTCTGATACTTCTTAGAAAAATAATTATATGGAATGCGCACTTAGTGTAGGATTAGGTGGAATAAAGGAAACATTAAGATGATCGATCACCTTCAACCAGACTTTTGCGGATCTCACTATTTGCTATTATTGGGATGCGAATTATGCAATATAATTTAGATGGAAAGGTTTAAATATTGGGAGTTTCTCGAAACAAATAGAATTCTGAGATCGTTCGGGATTATAGGCCACTTTCTGGCAGATCAAAATTTTTTCTTCCAAAATTGAAGAATGAAATCTTTTTTGATATAGAATGACTTTGGGGAGAATTACTTAAGATCATGTATGGTTATTTTGTGAGTTTGCTATGTTGTTGTTGTTGACATTGAAACTTCTAATTTCATTCCTTATTCAGACAAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGAAAGCTCATCACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTCAGCAACCGTGTGAACGATGCAGGGTTTTATAGGCCAGATGCTTATGCTGAAGATGACCCATTTAAACCGGGACCTCATTATCTGAAACAAGAATTTACTTGAACAATTTGATTACAAAATCCATTTTCTTATACAGACTGTCAATGCATTAATCTGATTTTTCCAGTCTTTAAATGTTAGTGCCTTTGTCTCTTCTGATTAAGAA

mRNA sequence

GAAGATAGGACAGCCATGGCCACTCCAATCTCAACACTCTCCTTTGCTTCCCCTTTTTTGCCGCTCAGGATTGAGGCGAATCCCAGAATTTCTCCTGCCTTGAACTTCCGTCCCCCGTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGAAAGCTCATCACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTCAGCAACCGTGTGAACGATGCAGGGTTTTATAGGCCAGATGCTTATGCTGAAGATGACCCATTTAAACCGGGACCTCATTATCTGAAACAAGAATTTACTTGAACAATTTGATTACAAAATCCATTTTCTTATACAGACTGTCAATGCATTAATCTGATTTTTCCAGTCTTTAAATGTTAGTGCCTTTGTCTCTTCTGATTAAGAA

Coding sequence (CDS)

ATGGCCACTCCAATCTCAACACTCTCCTTTGCTTCCCCTTTTTTGCCGCTCAGGATTGAGGCGAATCCCAGAATTTCTCCTGCCTTGAACTTCCGTCCCCCGTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGAAAGCTCATCACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTCAGCAACCGTGTGAACGATGCAGGGTTTTATAGGCCAGATGCTTATGCTGAAGATGACCCATTTAAACCGGGACCTCATTATCTGAAACAAGAATTTACTTGA

Protein sequence

MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT*

Homology

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BLAST of MELO3C019372T2 vs. Swiss-Prot
Match: PTA7_ARATH (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana GN=PTAC7 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.6e-48
Identity = 94/140 (67.14%), Postives = 108/140 (77.14%), Query Frame = 1


Query: 30  NFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI 89
           N R  FQ         + +GRRVWRRR LTKKDDM  YKM R+PF+EEQVR+++E GK++
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLTKKDDMLRYKMQRVPFVEEQVRKIREVGKVM 81

Query: 90  TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPD 149
           TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+
Sbjct: 82  TMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPE 141

Query: 150 AYAEDDPFKPGPHYLKQEFT 170
           AY E DP+KPGP YL + +T
Sbjct: 142 AYVEADPYKPGPGYLLEYYT 161

[Close]

BLAST of MELO3C019372T2 vs. TrEMBL
Match: A0A0A0L9J8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238200 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 1.9e-88
Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 1


Query: 1   MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 60
           MATPISTLSFASP LPLRIEANPRISPALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]

BLAST of MELO3C019372T2 vs. TrEMBL
Match: A0A058ZXU2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00396 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.2e-56
Identity = 111/159 (69.81%), Postives = 133/159 (83.65%), Query Frame = 1


Query: 11  ASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMD 70
           A+P    +   N R +PAL+ + P  V+++    G   GRRVWRRRKLTKKDD+  YKM+
Sbjct: 16  AAPASSPKRSVNAR-APALSSKAPLLVISQSGSRGR--GRRVWRRRKLTKKDDLLQYKME 75

Query: 71  RIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKK 130
           RIPFLEEQ R++KE GKL+TMDIERLLLSEDNRFDF+N+VAAEAKEYVE+NRDEYGG+KK
Sbjct: 76  RIPFLEEQERKIKETGKLLTMDIERLLLSEDNRFDFINDVAAEAKEYVENNRDEYGGTKK 135

Query: 131 AILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           AILHVLSNRVND+GFYRP+AY+E DPF+PGP YLK+EFT
Sbjct: 136 AILHVLSNRVNDSGFYRPEAYSESDPFRPGPGYLKEEFT 171

[Close]

BLAST of MELO3C019372T2 vs. TrEMBL
Match: A0A061G1Y5_THECC (Plastid transcriptionally active7 isoform 1 OS=Theobroma cacao GN=TCM_015438 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.2e-56
Identity = 117/171 (68.42%), Postives = 138/171 (80.70%), Query Frame = 1


Query: 1   MATPISTLSFASPFLPL-RIEANP-RISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKL 60
           ++ P    S  SP L   R   N  R++P  N +   +VV+R +  G   GRRVWRRRKL
Sbjct: 5   ISNPTCISSSISPLLKTARAGTNSWRLNP--NLKCQCRVVSRFESEG--GGRRVWRRRKL 64

Query: 61  TKKDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYV 120
           TKKD+M  YK++RIPFLEEQVR+++E GKL+TMDIERLLLSEDNRFDFVN+VAAEAK+Y+
Sbjct: 65  TKKDEMLQYKLERIPFLEEQVRKIREGGKLLTMDIERLLLSEDNRFDFVNDVAAEAKDYI 124

Query: 121 ESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           ESNRDEYGG+KKAILHVLSNRVND+GFYRPDAYAE DPFKPGP YLK+EFT
Sbjct: 125 ESNRDEYGGTKKAILHVLSNRVNDSGFYRPDAYAESDPFKPGPTYLKEEFT 171

[Close]

BLAST of MELO3C019372T2 vs. TrEMBL
Match: A0A0B0MTV6_GOSAR (Putative nicotinate-nucleotide adenylyltransferase OS=Gossypium arboreum GN=F383_10117 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 9.4e-56
Identity = 118/171 (69.01%), Postives = 136/171 (79.53%), Query Frame = 1


Query: 1   MATPISTLSFASPFLPLRIEANPRISP-ALNFRP-PFQVVARKQRNGEVSGRRVWRRRKL 60
           ++ P S  S  SP L    +A  R +   LN      QVV+R +  G   GRRVWRRRKL
Sbjct: 5   ISNPTSIASSVSPSLLKSTQARARTNSWRLNTHHLNSQVVSRLKSEG--GGRRVWRRRKL 64

Query: 61  TKKDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYV 120
            KKD+M  YK++R+PFLEEQVR+++E GKL+TMDIERLLLSEDNRFDFVN+VAAEAKEYV
Sbjct: 65  AKKDEMLQYKLERMPFLEEQVRKIREGGKLLTMDIERLLLSEDNRFDFVNDVAAEAKEYV 124

Query: 121 ESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           E+NRDEYGGSKKAILHVLSNRVND+GFYRPDAYAE DPFKPGP YLK+EFT
Sbjct: 125 ENNRDEYGGSKKAILHVLSNRVNDSGFYRPDAYAESDPFKPGPTYLKEEFT 173

[Close]

BLAST of MELO3C019372T2 vs. TrEMBL
Match: D7TAM0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g02390 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.1e-55
Identity = 115/164 (70.12%), Postives = 136/164 (82.93%), Query Frame = 1


Query: 5   ISTLSF--ASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKD 64
           +S+L F  +SP   + + A     P+ + R   QV+++ QR+G   GRRVWRRRKLTKKD
Sbjct: 3   LSSLPFVCSSPAPRIAVGAGNSWPPSFSVRS--QVISQLQRDGR--GRRVWRRRKLTKKD 62

Query: 65  DMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNR 124
           DM  YKMDRIPFLEE+VR+++E GKL+TMDIERLLLSEDNRFDFVNEVAAEAKEYVE+NR
Sbjct: 63  DMLRYKMDRIPFLEEKVRKIQEGGKLLTMDIERLLLSEDNRFDFVNEVAAEAKEYVENNR 122

Query: 125 DEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQ 167
           DEYGG+KKAILHVLSNRVNDAGFYRPDAY E +P+KPGP YLK+
Sbjct: 123 DEYGGNKKAILHVLSNRVNDAGFYRPDAYMESEPYKPGPGYLKE 162

[Close]

BLAST of MELO3C019372T2 vs. TAIR10
Match: AT5G24314.2 (AT5G24314.2 plastid transcriptionally active7)

HSP 1 Score: 185.3 bits (469), Expect = 3.2e-47
Identity = 94/148 (63.51%), Postives = 108/148 (72.97%), Query Frame = 1


Query: 30  NFRPPFQVVARKQRNGEVSGRRVWRRRKL--------TKKDDMSIYKMDRIPFLEEQVRR 89
           N R  FQ         + +GRRVWRRR L        TKKDDM  YKM R+PF+EEQVR+
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLVSTKLDILTKKDDMLRYKMQRVPFVEEQVRK 81

Query: 90  VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVN 149
           ++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVN
Sbjct: 82  IREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVN 141

Query: 150 DAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           D GF RP+AY E DP+KPGP YL + +T
Sbjct: 142 DLGFDRPEAYVEADPYKPGPGYLLEYYT 169

[Close]

BLAST of MELO3C019372T2 vs. NCBI nr
Match: gi|659111938|ref|XP_008455984.1| (PREDICTED: uncharacterized protein LOC103496049 [Cucumis melo])

HSP 1 Score: 341.7 bits (875), Expect = 7.6e-91
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1


Query: 1   MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 60
           MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]

BLAST of MELO3C019372T2 vs. NCBI nr
Match: gi|449456989|ref|XP_004146231.1| (PREDICTED: uncharacterized protein LOC101217841 [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 2.7e-88
Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 1


Query: 1   MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 60
           MATPISTLSFASP LPLRIEANPRISPALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]

BLAST of MELO3C019372T2 vs. NCBI nr
Match: gi|1009138528|ref|XP_015886635.1| (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 226.5 bits (576), Expect = 3.6e-56
Identity = 107/134 (79.85%), Postives = 125/134 (93.28%), Query Frame = 1


Query: 36  QVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIER 95
           Q+V++ +++G+  GRRVWRRRKLTKKDDM  YKM+R+PFLEEQVR+++E GKL+TMDIER
Sbjct: 39  QIVSQMKKDGK--GRRVWRRRKLTKKDDMLDYKMERVPFLEEQVRKIQEGGKLLTMDIER 98

Query: 96  LLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDD 155
           L+LSEDNRFDFVNE+AAEA EYVESNRDEYGGSKKAILHVLSNRVND+GFYRP+AYAE D
Sbjct: 99  LMLSEDNRFDFVNEIAAEANEYVESNRDEYGGSKKAILHVLSNRVNDSGFYRPEAYAESD 158

Query: 156 PFKPGPHYLKQEFT 170
           PFKPGP YLK+EFT
Sbjct: 159 PFKPGPSYLKEEFT 170

[Close]

BLAST of MELO3C019372T2 vs. NCBI nr
Match: gi|702489047|ref|XP_010035285.1| (PREDICTED: uncharacterized protein LOC104424523 [Eucalyptus grandis])

HSP 1 Score: 225.7 bits (574), Expect = 6.1e-56
Identity = 111/159 (69.81%), Postives = 133/159 (83.65%), Query Frame = 1


Query: 11  ASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMD 70
           A+P    +   N R +PAL+ + P  V+++    G   GRRVWRRRKLTKKDD+  YKM+
Sbjct: 16  AAPASSPKRSVNAR-APALSSKAPLLVISQSGSRGR--GRRVWRRRKLTKKDDLLQYKME 75

Query: 71  RIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKK 130
           RIPFLEEQ R++KE GKL+TMDIERLLLSEDNRFDF+N+VAAEAKEYVE+NRDEYGG+KK
Sbjct: 76  RIPFLEEQERKIKETGKLLTMDIERLLLSEDNRFDFINDVAAEAKEYVENNRDEYGGTKK 135

Query: 131 AILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           AILHVLSNRVND+GFYRP+AY+E DPF+PGP YLK+EFT
Sbjct: 136 AILHVLSNRVNDSGFYRPEAYSESDPFRPGPGYLKEEFT 171

[Close]

BLAST of MELO3C019372T2 vs. NCBI nr
Match: gi|590674163|ref|XP_007039090.1| (Plastid transcriptionally active7 isoform 1 [Theobroma cacao])

HSP 1 Score: 224.9 bits (572), Expect = 1.0e-55
Identity = 117/171 (68.42%), Postives = 138/171 (80.70%), Query Frame = 1


Query: 1   MATPISTLSFASPFLPL-RIEANP-RISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKL 60
           ++ P    S  SP L   R   N  R++P  N +   +VV+R +  G   GRRVWRRRKL
Sbjct: 5   ISNPTCISSSISPLLKTARAGTNSWRLNP--NLKCQCRVVSRFESEG--GGRRVWRRRKL 64

Query: 61  TKKDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYV 120
           TKKD+M  YK++RIPFLEEQVR+++E GKL+TMDIERLLLSEDNRFDFVN+VAAEAK+Y+
Sbjct: 65  TKKDEMLQYKLERIPFLEEQVRKIREGGKLLTMDIERLLLSEDNRFDFVNDVAAEAKDYI 124

Query: 121 ESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           ESNRDEYGG+KKAILHVLSNRVND+GFYRPDAYAE DPFKPGP YLK+EFT
Sbjct: 125 ESNRDEYGGTKKAILHVLSNRVNDSGFYRPDAYAESDPFKPGPTYLKEEFT 171

The following BLAST results are available for this feature:

BLAST of MELO3C019372T2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PTA7_ARATH	3.6e-48	67.14	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana GN=PTAC7 PE=1...	[more]

BLAST of MELO3C019372T2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9J8_CUCSA	1.9e-88	97.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238200 PE=4 SV=1	[more]
A0A058ZXU2_EUCGR	4.2e-56	69.81	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00396 PE=4 SV=1	[more]
A0A061G1Y5_THECC	7.2e-56	68.42	Plastid transcriptionally active7 isoform 1 OS=Theobroma cacao GN=TCM_015438 PE=...	[more]
A0A0B0MTV6_GOSAR	9.4e-56	69.01	Putative nicotinate-nucleotide adenylyltransferase OS=Gossypium arboreum GN=F383...	[more]
D7TAM0_VITVI	2.1e-55	70.12	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g02390 PE=4 SV=...	[more]

BLAST of MELO3C019372T2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24314.2	3.2e-47	63.51	plastid transcriptionally active7	[more]

BLAST of MELO3C019372T2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111938\|ref\|XP_008455984.1\|	7.6e-91	100.00	PREDICTED: uncharacterized protein LOC103496049 [Cucumis melo]	[more]
gi\|449456989\|ref\|XP_004146231.1\|	2.7e-88	97.04	PREDICTED: uncharacterized protein LOC101217841 [Cucumis sativus]	[more]
gi\|1009138528\|ref\|XP_015886635.1\|	3.6e-56	79.85	PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Ziziphus jujub...	[more]
gi\|702489047\|ref\|XP_010035285.1\|	6.1e-56	69.81	PREDICTED: uncharacterized protein LOC104424523 [Eucalyptus grandis]	[more]
gi\|590674163\|ref\|XP_007039090.1\|	1.0e-55	68.42	Plastid transcriptionally active7 isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016779	nucleotidyltransferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C019372	MELO3C019372	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C019372T2	MELO3C019372T2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C019372T2.cds1	MELO3C019372T2.cds1	CDS
MELO3C019372T2.cds2	MELO3C019372T2.cds2	CDS
MELO3C019372T2.cds3	MELO3C019372T2.cds3	CDS
MELO3C019372T2.cds4	MELO3C019372T2.cds4	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37257	FAMILY NOT NAMED	coord: 42..169 score: 2.7