ClCG05G009050 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G009050
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Plastid transcriptionally active7
Location	CG_Chr05 : 9873583 .. 9875795 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTTGTTTAATAGTATCATCCGAAAATGAAGATAGAACAGCGATGAGTACTCCAATCCCAACACTCTCCTTTGCTTCGCCTGTAATCACTCTCTCTTTCTCCTTTCTCTGTTTGATTCTTCTTCCAATGATGTCGGATACTTCAATATGGATATTCTGTTTGATCTTTACCTTCTCTTCCAAAATTCATCCATTTTTTCTTATCTTGGGGTTTTCTTTCAGTTGTTGCCGCACAAGATTGAGGTGAAGCCCCGAATTTCTTCTGCCTTTAACTTTCATCCTCCGTTTCAGGTTAACATTTCACTGATTTTTCTCAACAGCCAACTTACTAATCTTCTCTTCGTCTCTCACTCTTCGTGTTTTCTTGTTTACGTTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGGTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGGTAATGGTGAACCTGCTTTATTCTTTCTCTTAATTTCTCCCTTACCCTTTATTGTTTGTTTCATTCGTTTCCCAGTTCACTTCTCTCTGAAACTGAAAGAACGAGTCTTGCAATGTTGTGCTAATTCGACCTAAATTTCCTTTAAAAGAAACAAAGAGAATGAAACTGTAAAAGGAACATAGTTTGTGTAGGGATATGTCGTGTATTGTAACTGCCTGAAGCACTGGGGGCAGGAGTTTCTCTCTTTTGTGGAGTCTTTTACTCCTCTTTTTTATGGCTTTTGTGGGTAAATGCATGTTACTGCCTCTTGTTGTTGTGCATTACATAATCTTTTTATGATAACGTACAATTTCTTTGATTAACCTAGATTGGATGTATAACAGTTAGGGCTTCTAGGTTGTTCTCTTTTTTATGTTTATTTTTCCTTAATATATGTTTTCTTCTATTAAGAGAGAGATTTTGTTCATGCTTCCTTGTGGTTGGTGTTTCTTTGCTATTAGTATTGTAGGTGAACTACAGTTTACAACAGAGATGTGTAAACTTTGGCAAAAGGTAATTTGGGTTATGGTATGCTTGTTATAGCTTCTGTTTTGATTAAAGCAACCCAATGCATGATGTTTTATTGATAACTATCTAAATGTGGATGTGTCATAAATGATTCTTCTTTCCAGTCCATTAAACTTTGGTGATTGCTAATAATTAGGACACAAGCACCATGGGTAGTTAAAAACATTAGAGTATGTGGGGTTCTGGGTTCATGGTGTATACTGGTATTCAAATCCTACAAGTTTCTTAGTAACCATATGTGTAGATTTGTCAAGATGAAGTTAGGCGAGATGTGTAAATTGGCTCTGATACTTCTAAGAAAAATAGTGATATGGACTGTACTGTTAAGGGATGCAAACTAGACTTTTGCGATGATTGATTGCCTTCTACCAGATTTTTGCGAATTTTACTGTTTGCTAAGGGATGCAACTGTGTAATATTCTTTAGATGGAAAGGTGTAAATATTGGAAGTTTCTTGAAACAAATAAATTCTGAGATCGTTTTAGGCCACTTTCTTGCAGATCAAATTTTCTCTTTTAAATTGAAGCCTGAAATCCTTTTGGATATAGAACGACTTTGGCGAGAATTAGTTAACATCATATATCATTATTTTGGACGAGTTTGTTTTGTCGTTGTCTTTGACGTTGAAACTTTCAATTTCATTCCTTATTCAGACGAAGAAAGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAAGGTCAAGGAACAGGGTAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTCGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCACGTTCTTAGCAACCGAGTGAATGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGACGACCCATTTAAACCCGGACCTCACTATCTTAAAGAAGAATTTACTTGAAGAAGCTGATGACAAAATCCATTTTGTTATACAAAGACTGTCAGTGTATTAATCTGGTTTTTCCAGTTTTTAAATGTTAGCTAGTCCCTATTTCTCTTCAATTTAAGAATTTTGCTTTCCTCATGAGCTTTTTTCTTACCAATTATACCTCTTAAACTGCTACTTCTATTCGTTCTATTTCATCCAACATCCCCGAAAGAGGGAGG

mRNA sequence

ATGGAAGTTTGTTTAATAGTATCATCCGAAAATGAAGATAGAACAGCGATGAGTACTCCAATCCCAACACTCTCCTTTGCTTCGCCTTTGTTGCCGCACAAGATTGAGGTGAAGCCCCGAATTTCTTCTGCCTTTAACTTTCATCCTCCGTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGGTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACGAAGAAAGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAAGGTCAAGGAACAGGGTAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTCGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCACGTTCTTAGCAACCGAGTGAATGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGACGACCCATTTAAACCCGGACCTCACTATCTTAAAGAAGAATTTACTTGAAGAAGCTGATGACAAAATCCATTTTGTTATACAAAGACTGTCAGTGTATTAATCTGGTTTTTCCAGTTTTTAAATGTTAGCTAGTCCCTATTTCTCTTCAATTTAAGAATTTTGCTTTCCTCATGAGCTTTTTTCTTACCAATTATACCTCTTAAACTGCTACTTCTATTCGTTCTATTTCATCCAACATCCCCGAAAGAGGGAGG

Coding sequence (CDS)

ATGGAAGTTTGTTTAATAGTATCATCCGAAAATGAAGATAGAACAGCGATGAGTACTCCAATCCCAACACTCTCCTTTGCTTCGCCTTTGTTGCCGCACAAGATTGAGGTGAAGCCCCGAATTTCTTCTGCCTTTAACTTTCATCCTCCGTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGGTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACGAAGAAAGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAAGGTCAAGGAACAGGGTAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTCGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCACGTTCTTAGCAACCGAGTGAATGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGACGACCCATTTAAACCCGGACCTCACTATCTTAAAGAAGAATTTACTTGA

Protein sequence

MEVCLIVSSENEDRTAMSTPIPTLSFASPLLPHKIEVKPRISSAFNFHPPFQVVARKQRNGEGSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT

Homology

[Close]

BLAST of ClCG05G009050 vs. Swiss-Prot
Match: PTA7_ARATH (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana GN=PTAC7 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.0e-48
Identity = 92/124 (74.19%), Postives = 104/124 (83.87%), Query Frame = 1


Query: 62  EGSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD 121
           + +GRRVWRRR LTKKDDM  YKM R+PF+EEQVRK++E GK++TMDIE+LLL EDNRF+
Sbjct: 38  DDNGRRVWRRRTLTKKDDMLRYKMQRVPFVEEQVRKIREVGKVMTMDIEQLLLREDNRFE 97

Query: 122 FVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLK 181
           FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+AY E DP+KPGP YL 
Sbjct: 98  FVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLL 157

Query: 182 EEFT 186
           E +T
Sbjct: 158 EYYT 161

[Close]

BLAST of ClCG05G009050 vs. TrEMBL
Match: A0A0A0L9J8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238200 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-81
Identity = 152/169 (89.94%), Postives = 160/169 (94.67%), Query Frame = 1


Query: 17  MSTPIPTLSFASPLLPHKIEVKPRISSAFNFHPPFQVVARKQRNGEGSGRRVWRRRKLTK 76
           M+TPI TLSFASP LP +IE  PRIS A NF PPFQ+VARKQ++GE SGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60

Query: 77  KDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 136
           KDDMSIYKMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 137 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT 186
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLK+EFT
Sbjct: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]

BLAST of ClCG05G009050 vs. TrEMBL
Match: A0A0B0MTV6_GOSAR (Putative nicotinate-nucleotide adenylyltransferase OS=Gossypium arboreum GN=F383_10117 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.3e-58
Identity = 121/172 (70.35%), Postives = 137/172 (79.65%), Query Frame = 1


Query: 16  AMSTPIPTLSFASPLLPHKIEVKPRISS--AFNFHPPFQVVARKQRNGEGSGRRVWRRRK 75
           A+S P    S  SP L    + + R +S      H   QVV+R +   EG GRRVWRRRK
Sbjct: 4   AISNPTSIASSVSPSLLKSTQARARTNSWRLNTHHLNSQVVSRLK--SEGGGRRVWRRRK 63

Query: 76  LTKKDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEY 135
           L KKD+M  YK++R+PFLEEQVRK++E GKL+TMDIERLLLSEDNRFDFVN+VAAEAKEY
Sbjct: 64  LAKKDEMLQYKLERMPFLEEQVRKIREGGKLLTMDIERLLLSEDNRFDFVNDVAAEAKEY 123

Query: 136 VESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT 186
           VE+NRDEYGGSKKAILHVLSNRVND+GFYRPDAYAE DPFKPGP YLKEEFT
Sbjct: 124 VENNRDEYGGSKKAILHVLSNRVNDSGFYRPDAYAESDPFKPGPTYLKEEFT 173

[Close]

BLAST of ClCG05G009050 vs. TrEMBL
Match: A0A061G1Y5_THECC (Plastid transcriptionally active7 isoform 1 OS=Theobroma cacao GN=TCM_015438 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.2e-57
Identity = 117/172 (68.02%), Postives = 137/172 (79.65%), Query Frame = 1


Query: 16  AMSTPIPTLSFASPLLPHKIEVKPRISSAFNFHPPFQVVAR--KQRNGEGSGRRVWRRRK 75
           A+S P    S  SPLL    +     ++++  +P  +   R   +   EG GRRVWRRRK
Sbjct: 4   AISNPTCISSSISPLL----KTARAGTNSWRLNPNLKCQCRVVSRFESEGGGRRVWRRRK 63

Query: 76  LTKKDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEY 135
           LTKKD+M  YK++RIPFLEEQVRK++E GKL+TMDIERLLLSEDNRFDFVN+VAAEAK+Y
Sbjct: 64  LTKKDEMLQYKLERIPFLEEQVRKIREGGKLLTMDIERLLLSEDNRFDFVNDVAAEAKDY 123

Query: 136 VESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT 186
           +ESNRDEYGG+KKAILHVLSNRVND+GFYRPDAYAE DPFKPGP YLKEEFT
Sbjct: 124 IESNRDEYGGTKKAILHVLSNRVNDSGFYRPDAYAESDPFKPGPTYLKEEFT 171

[Close]

BLAST of ClCG05G009050 vs. TrEMBL
Match: A0A0D2Q2J5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G267700 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.6e-56
Identity = 107/124 (86.29%), Postives = 117/124 (94.35%), Query Frame = 1


Query: 62  EGSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFD 121
           EG GRRVWRRRKL KKD+M  YK++R+PFLEEQVRK++E GKL+TMDIERLLLSEDNRFD
Sbjct: 30  EGGGRRVWRRRKLAKKDEMLQYKLERMPFLEEQVRKIREGGKLLTMDIERLLLSEDNRFD 89

Query: 122 FVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLK 181
           FVN+VAAEAKEYVE+NRDEYGGSKKAILHVLSNRVND+GFYRPDAYAE DPFKPGP YLK
Sbjct: 90  FVNDVAAEAKEYVENNRDEYGGSKKAILHVLSNRVNDSGFYRPDAYAESDPFKPGPTYLK 149

Query: 182 EEFT 186
           EEFT
Sbjct: 150 EEFT 153

[Close]

BLAST of ClCG05G009050 vs. TrEMBL
Match: A0A058ZXU2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00396 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 6.0e-56
Identity = 113/159 (71.07%), Postives = 130/159 (81.76%), Query Frame = 1


Query: 27  ASPLLPHKIEVKPRISSAFNFHPPFQVVARKQRNGEGSGRRVWRRRKLTKKDDMSIYKMD 86
           A+P    K  V  R + A +   P  V++  Q    G GRRVWRRRKLTKKDD+  YKM+
Sbjct: 16  AAPASSPKRSVNAR-APALSSKAPLLVIS--QSGSRGRGRRVWRRRKLTKKDDLLQYKME 75

Query: 87  RIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKK 146
           RIPFLEEQ RK+KE GKL+TMDIERLLLSEDNRFDF+N+VAAEAKEYVE+NRDEYGG+KK
Sbjct: 76  RIPFLEEQERKIKETGKLLTMDIERLLLSEDNRFDFINDVAAEAKEYVENNRDEYGGTKK 135

Query: 147 AILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT 186
           AILHVLSNRVND+GFYRP+AY+E DPF+PGP YLKEEFT
Sbjct: 136 AILHVLSNRVNDSGFYRPEAYSESDPFRPGPGYLKEEFT 171

[Close]

BLAST of ClCG05G009050 vs. TAIR10
Match: AT5G24314.2 (AT5G24314.2 plastid transcriptionally active7)

HSP 1 Score: 187.2 bits (474), Expect = 9.2e-48
Identity = 92/132 (69.70%), Postives = 104/132 (78.79%), Query Frame = 1


Query: 62  EGSGRRVWRRRKL--------TKKDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLL 121
           + +GRRVWRRR L        TKKDDM  YKM R+PF+EEQVRK++E GK++TMDIE+LL
Sbjct: 38  DDNGRRVWRRRTLVSTKLDILTKKDDMLRYKMQRVPFVEEQVRKIREVGKVMTMDIEQLL 97

Query: 122 LSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPF 181
           L EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+AY E DP+
Sbjct: 98  LREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPEAYVEADPY 157

Query: 182 KPGPHYLKEEFT 186
           KPGP YL E +T
Sbjct: 158 KPGPGYLLEYYT 169

[Close]

BLAST of ClCG05G009050 vs. NCBI nr
Match: gi|659111938|ref|XP_008455984.1| (PREDICTED: uncharacterized protein LOC103496049 [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 2.2e-83
Identity = 156/169 (92.31%), Postives = 160/169 (94.67%), Query Frame = 1


Query: 17  MSTPIPTLSFASPLLPHKIEVKPRISSAFNFHPPFQVVARKQRNGEGSGRRVWRRRKLTK 76
           M+TPI TLSFASP LP +IE  PRIS A NF PPFQVVARKQRNGE SGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 60

Query: 77  KDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 136
           KDDMSIYKMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 137 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT 186
           NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLK+EFT
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]

BLAST of ClCG05G009050 vs. NCBI nr
Match: gi|449456989|ref|XP_004146231.1| (PREDICTED: uncharacterized protein LOC101217841 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 1.6e-81
Identity = 152/169 (89.94%), Postives = 160/169 (94.67%), Query Frame = 1


Query: 17  MSTPIPTLSFASPLLPHKIEVKPRISSAFNFHPPFQVVARKQRNGEGSGRRVWRRRKLTK 76
           M+TPI TLSFASP LP +IE  PRIS A NF PPFQ+VARKQ++GE SGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60

Query: 77  KDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 136
           KDDMSIYKMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 137 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT 186
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLK+EFT
Sbjct: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]

BLAST of ClCG05G009050 vs. NCBI nr
Match: gi|728818815|gb|KHG02929.1| (putative nicotinate-nucleotide adenylyltransferase [Gossypium arboreum])

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-58
Identity = 121/172 (70.35%), Postives = 137/172 (79.65%), Query Frame = 1


Query: 16  AMSTPIPTLSFASPLLPHKIEVKPRISS--AFNFHPPFQVVARKQRNGEGSGRRVWRRRK 75
           A+S P    S  SP L    + + R +S      H   QVV+R +   EG GRRVWRRRK
Sbjct: 4   AISNPTSIASSVSPSLLKSTQARARTNSWRLNTHHLNSQVVSRLK--SEGGGRRVWRRRK 63

Query: 76  LTKKDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEY 135
           L KKD+M  YK++R+PFLEEQVRK++E GKL+TMDIERLLLSEDNRFDFVN+VAAEAKEY
Sbjct: 64  LAKKDEMLQYKLERMPFLEEQVRKIREGGKLLTMDIERLLLSEDNRFDFVNDVAAEAKEY 123

Query: 136 VESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT 186
           VE+NRDEYGGSKKAILHVLSNRVND+GFYRPDAYAE DPFKPGP YLKEEFT
Sbjct: 124 VENNRDEYGGSKKAILHVLSNRVNDSGFYRPDAYAESDPFKPGPTYLKEEFT 173

[Close]

BLAST of ClCG05G009050 vs. NCBI nr
Match: gi|1009138528|ref|XP_015886635.1| (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 231.9 bits (590), Expect = 9.2e-58
Identity = 118/163 (72.39%), Postives = 138/163 (84.66%), Query Frame = 1


Query: 28  SPLLPHKIEVKPRISSAFNFH-----PPFQVVARKQRNGEGSGRRVWRRRKLTKKDDMSI 87
           SP L  +IE++   S AF+F         Q+V++ +++G+G  RRVWRRRKLTKKDDM  
Sbjct: 11  SPALS-RIEMRAGNSFAFSFSCSSRTQNLQIVSQMKKDGKG--RRVWRRRKLTKKDDMLD 70

Query: 88  YKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYG 147
           YKM+R+PFLEEQVRK++E GKL+TMDIERL+LSEDNRFDFVNE+AAEA EYVESNRDEYG
Sbjct: 71  YKMERVPFLEEQVRKIQEGGKLLTMDIERLMLSEDNRFDFVNEIAAEANEYVESNRDEYG 130

Query: 148 GSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT 186
           GSKKAILHVLSNRVND+GFYRP+AYAE DPFKPGP YLKEEFT
Sbjct: 131 GSKKAILHVLSNRVNDSGFYRPEAYAESDPFKPGPSYLKEEFT 170

[Close]

BLAST of ClCG05G009050 vs. NCBI nr
Match: gi|823214450|ref|XP_012439977.1| (PREDICTED: uncharacterized protein LOC105765437 isoform X2 [Gossypium raimondii])

HSP 1 Score: 229.6 bits (584), Expect = 4.6e-57
Identity = 119/172 (69.19%), Postives = 135/172 (78.49%), Query Frame = 1


Query: 16  AMSTPIPTLSFASPLLPHKIEVKPRISS--AFNFHPPFQVVARKQRNGEGSGRRVWRRRK 75
           A+S P    S   P L    + +   +S      H   QVV+R +   EG GRRVWRRRK
Sbjct: 4   AISNPTSIASSVPPSLLKSTQARAGTNSFRLNTHHLNSQVVSRLK--SEGGGRRVWRRRK 63

Query: 76  LTKKDDMSIYKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEY 135
           L KKD+M  YK++R+PFLEEQVRK++E GKL+TMDIERLLLSEDNRFDFVN+VAAEAKEY
Sbjct: 64  LAKKDEMLQYKLERMPFLEEQVRKIREGGKLLTMDIERLLLSEDNRFDFVNDVAAEAKEY 123

Query: 136 VESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKEEFT 186
           VE+NRDEYGGSKKAILHVLSNRVND+GFYRPDAYAE DPFKPGP YLKEEFT
Sbjct: 124 VENNRDEYGGSKKAILHVLSNRVNDSGFYRPDAYAESDPFKPGPTYLKEEFT 173

The following BLAST results are available for this feature:

BLAST of ClCG05G009050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PTA7_ARATH	1.0e-48	74.19	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana GN=PTAC7 PE=1...	[more]

BLAST of ClCG05G009050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9J8_CUCSA	1.1e-81	89.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238200 PE=4 SV=1	[more]
A0A0B0MTV6_GOSAR	1.3e-58	70.35	Putative nicotinate-nucleotide adenylyltransferase OS=Gossypium arboreum GN=F383...	[more]
A0A061G1Y5_THECC	4.2e-57	68.02	Plastid transcriptionally active7 isoform 1 OS=Theobroma cacao GN=TCM_015438 PE=...	[more]
A0A0D2Q2J5_GOSRA	4.6e-56	86.29	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G267700 PE=4 SV=1	[more]
A0A058ZXU2_EUCGR	6.0e-56	71.07	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00396 PE=4 SV=1	[more]

BLAST of ClCG05G009050 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24314.2	9.2e-48	69.70	plastid transcriptionally active7	[more]

BLAST of ClCG05G009050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111938\|ref\|XP_008455984.1\|	2.2e-83	92.31	PREDICTED: uncharacterized protein LOC103496049 [Cucumis melo]	[more]
gi\|449456989\|ref\|XP_004146231.1\|	1.6e-81	89.94	PREDICTED: uncharacterized protein LOC101217841 [Cucumis sativus]	[more]
gi\|728818815\|gb\|KHG02929.1\|	1.9e-58	70.35	putative nicotinate-nucleotide adenylyltransferase [Gossypium arboreum]	[more]
gi\|1009138528\|ref\|XP_015886635.1\|	9.2e-58	72.39	PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Ziziphus jujub...	[more]
gi\|823214450\|ref\|XP_012439977.1\|	4.6e-57	69.19	PREDICTED: uncharacterized protein LOC105765437 isoform X2 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
biological_process	GO:0042793	transcription from plastid promoter
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G009050.1	ClCG05G009050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37257	FAMILY NOT NAMED	coord: 58..185 score: 2.6
None	No IPR available	PANTHER	PTHR37257:SF1	PLASTID TRANSCRIPTIONALLY ACTIVE7	coord: 58..185 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G009050	Csa3G238200	Cucumber (Chinese Long) v2	cuwcgB230
ClCG05G009050	MELO3C019372	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G009050	Cla004268	Watermelon (97103) v1	wcgwmB286
ClCG05G009050	Cla97C05G091370	Watermelon (97103) v2	wcgwmbB229
ClCG05G009050	CSPI03G19680	Wild cucumber (PI 183967)	cpiwcgB237
ClCG05G009050	Cucsa.032280	Cucumber (Gy14) v1	cgywcgB003
ClCG05G009050	CmoCh16G000440	Cucurbita moschata (Rifu)	cmowcgB290
ClCG05G009050	CsGy3G019600	Cucumber (Gy14) v2	cgybwcgB214
ClCG05G009050	CsaV3_3G019730	Cucumber (Chinese Long) v3	cucwcgB238

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G009050	Silver-seed gourd	carwcgB0495
ClCG05G009050	Silver-seed gourd	carwcgB0524
ClCG05G009050	Silver-seed gourd	carwcgB0525
ClCG05G009050	Silver-seed gourd	carwcgB0965
ClCG05G009050	Cucumber (Chinese Long) v3	cucwcgB417
ClCG05G009050	Watermelon (97103) v2	wcgwmbB213
ClCG05G009050	Watermelon (97103) v2	wcgwmbB231
ClCG05G009050	Wax gourd	wcgwgoB413
ClCG05G009050	Wax gourd	wcgwgoB427
ClCG05G009050	Wax gourd	wcgwgoB437
ClCG05G009050	Watermelon (Charleston Gray)	wcgwcgB099
ClCG05G009050	Cucumber (Gy14) v1	cgywcgB376
ClCG05G009050	Cucumber (Gy14) v1	cgywcgB449
ClCG05G009050	Cucurbita maxima (Rimu)	cmawcgB266
ClCG05G009050	Cucurbita maxima (Rimu)	cmawcgB296
ClCG05G009050	Cucurbita maxima (Rimu)	cmawcgB365
ClCG05G009050	Cucurbita maxima (Rimu)	cmawcgB368
ClCG05G009050	Cucurbita maxima (Rimu)	cmawcgB559
ClCG05G009050	Cucurbita moschata (Rifu)	cmowcgB256
ClCG05G009050	Cucurbita moschata (Rifu)	cmowcgB359
ClCG05G009050	Cucurbita moschata (Rifu)	cmowcgB362
ClCG05G009050	Cucurbita moschata (Rifu)	cmowcgB557
ClCG05G009050	Wild cucumber (PI 183967)	cpiwcgB246
ClCG05G009050	Wild cucumber (PI 183967)	cpiwcgB413
ClCG05G009050	Cucumber (Chinese Long) v2	cuwcgB238
ClCG05G009050	Cucumber (Chinese Long) v2	cuwcgB395
ClCG05G009050	Melon (DHL92) v3.5.1	mewcgB026
ClCG05G009050	Melon (DHL92) v3.5.1	mewcgB430
ClCG05G009050	Watermelon (97103) v1	wcgwmB291
ClCG05G009050	Watermelon (97103) v1	wcgwmB299
ClCG05G009050	Cucurbita pepo (Zucchini)	cpewcgB043
ClCG05G009050	Cucurbita pepo (Zucchini)	cpewcgB046
ClCG05G009050	Cucurbita pepo (Zucchini)	cpewcgB173
ClCG05G009050	Cucurbita pepo (Zucchini)	cpewcgB207
ClCG05G009050	Cucurbita pepo (Zucchini)	cpewcgB678
ClCG05G009050	Bottle gourd (USVL1VR-Ls)	lsiwcgB021
ClCG05G009050	Bottle gourd (USVL1VR-Ls)	lsiwcgB332
ClCG05G009050	Bottle gourd (USVL1VR-Ls)	lsiwcgB334
ClCG05G009050	Cucumber (Gy14) v2	cgybwcgB221
ClCG05G009050	Cucumber (Gy14) v2	cgybwcgB361
ClCG05G009050	Melon (DHL92) v3.6.1	medwcgB024
ClCG05G009050	Melon (DHL92) v3.6.1	medwcgB417
ClCG05G009050	Melon (DHL92) v3.6.1	medwcgB428