CsGy3G019600 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G019600
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionprotein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1
LocationChr3 : 15788063 .. 15790681 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTATCAATATCATTTATTATTAAAATGGTAAATCTAAGTTCAGGTTTAAGCCTTAATTTTCACATTTTTTGGATTGTTTTTACTGAAAAGAAAAAGGAAGTTTTTCTCATAATTTAGAAAAGGACAAATTTCTAAAGATTTTCGAGGATATGGGTTATTTATCAAAAAAGCGAGAGTTTTGGGAGAGCTCGCGTGACGAAAGTAATAACATCATTCGAAAATGAAGATAGGACAGCCATGGCTACTCCAATCTCAACACTCTCCTTTGCTTCCCCTGTAATCACTCTCCCTCTTTCTTTCTTCGTCCTTTGGTATCTCAAACTTTCATATGGATATTCTGTTCGATCCCTTCTTTTGTTCTTTACTTTCTCTTTCAAAATTCGTTCACTCGTGCTTATGTTTGGGTTTTCTTTCAGTCATTGCCGCTCAGGATTGAGGCGAATCCCCGAATTTCTCCTGCCTTGAACTTTCGTCCCCCGTTTCAGGTTTACATTTCATTGATTGTCTCAACAACCCCAACTTACTTATCTTCTCTTTTGCCTCTCATTCTTCGTGTTTTTCTTGTTTATGTTTTCAGTTGGTCGCTAGAAAACAGAAAAGTGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGGTATGGTGAATCTGTTTTATTCTTTCTCTTAACTTCTCCTCTACCCTCTTATCCTTTGTTTAATTTGTTTCCCATTTCGCGGCTTTGTGAAACTAGAGTCTTGCAATGTCGGGCTAATTCGACCTAAATTTTATTAAATGAAACAAAGAGTGAAACTGTGAAAGGAACTTGGTTTTGGTAGTAATAATTCTTGTATTACAACTGCCTGAAGCATTGGGAGTAGGAATTTCTCTCTTTCTTTCGGTGGCTCTTGTGAGTACAAGCATGCTCCTGCCTCTTGTTGGAGTGCATTACATAATCTTTTTATGATAACATACCATTTCTTTGATTAACCTATATTGGTTGTATTTCAGTTGGTAACTTTCCTCTATAATGGCCTCTTGGTTGTTATCTTTTTATATTTATTTTTCCTTAATATATGGTTTCTTCTATTAAGAGAGAGAGTTTTGTTCATGCCTCCTTGTGGTTAGTGTTTCTTTGCTATCAGTGTTGTATGTGAACTACAGTTTACAACAGAGATGTGTAAACTTTGGAAAAAGGTTATTTGGTCCTTTTGTGACGGTTATTGGAGATGTTATTGCTTGTTATAGCATCTTTTTTTATCAATGCAACCCCATCGTTTTTCATGGATAACTATCTAAATGGGGGTGTGTCATTTATGATTCTTCTTTCCAATCGATCAAACTTTGGTGGTTACTGATAATTAGGTGTCACGGGGTGATTCCCGAGTAGGAAATTCTTGTCTCTTTGGTCCTGACATTAGGATGCAAGCACCACAGATAGTAAAAAAACACTAGGGGATGTGGGGTTCTGGGTTCATGGTAGTATTCAAATCCTACAAGTTTCTTAGTAACATATTAGATCAGGCAGTTGTCTAGATGAAATCAGGCAAGATGTGTGAATCGGCTCTGATACTTCTAAGAAAAATAATGATATGGAATGCGCACTTAGTGTAGGATTAGGTGGAATAAAGGAAACATTGAGATGATTGATCACCTTCAACCAGACATTTGTGAATCTTACTACTTGCTATTGTAAGGATGCGAACTATGCAATATAATTTAGATGGAAAGGTTTAAATATTGGGAGTTTCTTGAAACAAATAGACGTCTGAGATCGTTTGGGATTATAGGCCACTTTCTGGCAGATCAAAATTTTTCTTCCAAAATTGAAGAATGGAATCTTTTTTGATATAGAACGACTTTGGGGAGAATTAGTTAAGATTATGTATCGTTATTTTGTAAGAGTTCGCTATGTTGTTGTTGACATTGAAACTTCTAATTTCATTCCTTATTCAGACAAAGAAGGATGACATGTCAATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAATCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTTGAGAGCAACCGCGATGAATATGGGGGTACCAAGAAAGCCATCCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGATGACCCATTTAAACCCGGACCTCATTATCTGAAACAAGAATTTACTTAACCTGATTACAAAATCCATTTTCTTATACAAACTGTCAATGCATTAATCTGATTTTTCCAGTTTTCAAATGTTAGCTAGTGCCTACGTCTCTTCTGATTAAGAATTGTGCTTGCCTCATCCTCACGAGTTTTTTCTCTAACCAAATATTACCTCTTTAAACTCCTACTTTTCTATTCGTTATGTTTCATCCAACATTCCCAATAGGAGGGAAGATTGTTATCGACCAACTAATGAAACCATTAGAAAGTTTCTTTTATGAACTCCATTTGTTGTTTTCCATGGTATAAAGCATTTAAAAGGGCCTATGAAGATAAATAATATATTATATAATGATATTTTTA

mRNA sequence

TGTATCAATATCATTTATTATTAAAATGGTAAATCTAAGTTCAGGTTTAAGCCTTAATTTTCACATTTTTTGGATTGTTTTTACTGAAAAGAAAAAGGAAGTTTTTCTCATAATTTAGAAAAGGACAAATTTCTAAAGATTTTCGAGGATATGGGTTATTTATCAAAAAAGCGAGAGTTTTGGGAGAGCTCGCGTGACGAAAGTAATAACATCATTCGAAAATGAAGATAGGACAGCCATGGCTACTCCAATCTCAACACTCTCCTTTGCTTCCCCTTCATTGCCGCTCAGGATTGAGGCGAATCCCCGAATTTCTCCTGCCTTGAACTTTCGTCCCCCGTTTCAGTTGGTCGCTAGAAAACAGAAAAGTGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGATGACATGTCAATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAATCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTTGAGAGCAACCGCGATGAATATGGGGGTACCAAGAAAGCCATCCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGATGACCCATTTAAACCCGGACCTCATTATCTGAAACAAGAATTTACTTAACCTGATTACAAAATCCATTTTCTTATACAAACTGTCAATGCATTAATCTGATTTTTCCAGTTTTCAAATGTTAGCTAGTGCCTACGTCTCTTCTGATTAAGAATTGTGCTTGCCTCATCCTCACGAGTTTTTTCTCTAACCAAATATTACCTCTTTAAACTCCTACTTTTCTATTCGTTATGTTTCATCCAACATTCCCAATAGGAGGGAAGATTGTTATCGACCAACTAATGAAACCATTAGAAAGTTTCTTTTATGAACTCCATTTGTTGTTTTCCATGGTATAAAGCATTTAAAAGGGCCTATGAAGATAAATAATATATTATATAATGATATTTTTA

Coding sequence (CDS)

ATGGCTACTCCAATCTCAACACTCTCCTTTGCTTCCCCTTCATTGCCGCTCAGGATTGAGGCGAATCCCCGAATTTCTCCTGCCTTGAACTTTCGTCCCCCGTTTCAGTTGGTCGCTAGAAAACAGAAAAGTGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGATGACATGTCAATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAATCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTTGAGAGCAACCGCGATGAATATGGGGGTACCAAGAAAGCCATCCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGATGACCCATTTAAACCCGGACCTCATTATCTGAAACAAGAATTTACTTAA

Protein sequence

MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Homology
[Close]
BLAST of CsGy3G019600 vs. NCBI nr
Match: XP_004146231.1 (PREDICTED: uncharacterized protein LOC101217841 [Cucumis sativus] >KGN57654.1 hypothetical protein Csa_3G238200 [Cucumis sativus])

HSP 1 Score: 335.5 bits (859), Expect = 1.0e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60
           MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of CsGy3G019600 vs. NCBI nr
Match: XP_008455984.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucumis melo])

HSP 1 Score: 328.2 bits (840), Expect = 1.7e-86
Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 0 

Query: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60
           MATPISTLSFASP LPLRIEANPRISPALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of CsGy3G019600 vs. NCBI nr
Match: XP_016901917.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucumis melo])

HSP 1 Score: 306.2 bits (783), Expect = 6.8e-80
Identity = 151/155 (97.42%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 15  LPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 74
           LPLRIEANPRISPALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTKKDDMSIYKMDRIPF
Sbjct: 3   LPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 62

Query: 75  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILH 134
           LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGG+KKAILH
Sbjct: 63  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 122

Query: 135 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 123 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 157

[Close]
BLAST of CsGy3G019600 vs. NCBI nr
Match: XP_023553428.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.9 bits (699), Expect = 3.7e-70
Identity = 139/169 (82.25%), Postives = 149/169 (88.17%), Query Frame = 0 

Query: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60
           M TPI TLSFASP    RI+    IS   NF P  Q+ ARKQ+ GE  GRRVWRRRKLTK
Sbjct: 1   MTTPIPTLSFASP----RIQTRAGISHGFNFPPRLQMAARKQRDGEGVGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KD+MSI+KMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAK+YVE+
Sbjct: 61  KDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKDYVEN 120

Query: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 165

[Close]
BLAST of CsGy3G019600 vs. NCBI nr
Match: XP_023553427.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.9 bits (699), Expect = 3.7e-70
Identity = 140/169 (82.84%), Postives = 150/169 (88.76%), Query Frame = 0 

Query: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60
           M TPI TLSFASP L  RI+    IS   NF P  Q+ ARKQ+ GE  GRRVWRRRKLTK
Sbjct: 1   MTTPIPTLSFASP-LFQRIQTRAGISHGFNFPPRLQMAARKQRDGEGVGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KD+MSI+KMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAK+YVE+
Sbjct: 61  KDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKDYVEN 120

Query: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 168

[Close]
BLAST of CsGy3G019600 vs. TAIR10
Match: AT5G24314.2 (plastid transcriptionally active7)

HSP 1 Score: 181.0 bits (458), Expect = 6.0e-46
Identity = 93/148 (62.84%), Postives = 110/148 (74.32%), Query Frame = 0 

Query: 30  NFRPPFQLVARKQKSGEVSGRRVWRRRK--------LTKKDDMSIYKMDRIPFLEEQVRR 89
           N R  FQ         + +GRRVWRRR         LTKKDDM  YKM R+PF+EEQVR+
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLVSTKLDILTKKDDMLRYKMQRVPFVEEQVRK 81

Query: 90  VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILHVLSNRVN 149
           ++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGG+KKAI HVLSNRVN
Sbjct: 82  IREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVN 141

Query: 150 DAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           D GF RP+AY E DP+KPGP YL + +T
Sbjct: 142 DLGFDRPEAYVEADPYKPGPGYLLEYYT 169

[Close]
BLAST of CsGy3G019600 vs. Swiss-Prot
Match: sp|Q8VZV9|PTA7_ARATH (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PTAC7 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 6.8e-47
Identity = 93/140 (66.43%), Postives = 110/140 (78.57%), Query Frame = 0 

Query: 30  NFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI 89
           N R  FQ         + +GRRVWRRR LTKKDDM  YKM R+PF+EEQVR+++E GK++
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLTKKDDMLRYKMQRVPFVEEQVRKIREVGKVM 81

Query: 90  TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILHVLSNRVNDAGFYRPD 149
           TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGG+KKAI HVLSNRVND GF RP+
Sbjct: 82  TMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPE 141

Query: 150 AYAEDDPFKPGPHYLKQEFT 170
           AY E DP+KPGP YL + +T
Sbjct: 142 AYVEADPYKPGPGYLLEYYT 161

[Close]
BLAST of CsGy3G019600 vs. TrEMBL
Match: tr|A0A0A0L9J8|A0A0A0L9J8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238200 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.9e-89
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60
           MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of CsGy3G019600 vs. TrEMBL
Match: tr|A0A1S3C3E7|A0A1S3C3E7_CUCME (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496049 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.1e-86
Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 0 

Query: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60
           MATPISTLSFASP LPLRIEANPRISPALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of CsGy3G019600 vs. TrEMBL
Match: tr|A0A1S4E109|A0A1S4E109_CUCME (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496049 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.5e-80
Identity = 151/155 (97.42%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 15  LPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 74
           LPLRIEANPRISPALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTKKDDMSIYKMDRIPF
Sbjct: 3   LPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 62

Query: 75  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILH 134
           LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGG+KKAILH
Sbjct: 63  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 122

Query: 135 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 123 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 157

[Close]
BLAST of CsGy3G019600 vs. TrEMBL
Match: tr|A0A058ZXU2|A0A058ZXU2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00396 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 6.6e-55
Identity = 111/159 (69.81%), Postives = 134/159 (84.28%), Query Frame = 0 

Query: 11  ASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMD 70
           A+P+   +   N R +PAL+ + P  ++++    G   GRRVWRRRKLTKKDD+  YKM+
Sbjct: 16  AAPASSPKRSVNAR-APALSSKAPLLVISQSGSRGR--GRRVWRRRKLTKKDDLLQYKME 75

Query: 71  RIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKK 130
           RIPFLEEQ R++KE GKL+TMDIERLLLSEDNRFDF+N+VAAEAKEYVE+NRDEYGGTKK
Sbjct: 76  RIPFLEEQERKIKETGKLLTMDIERLLLSEDNRFDFINDVAAEAKEYVENNRDEYGGTKK 135

Query: 131 AILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           AILHVLSNRVND+GFYRP+AY+E DPF+PGP YLK+EFT
Sbjct: 136 AILHVLSNRVNDSGFYRPEAYSESDPFRPGPGYLKEEFT 171

[Close]
BLAST of CsGy3G019600 vs. TrEMBL
Match: tr|A0A061G1Y5|A0A061G1Y5_THECC (Plastid transcriptionally active7 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_015438 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-54
Identity = 110/146 (75.34%), Postives = 129/146 (88.36%), Query Frame = 0 

Query: 24  RISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVK 83
           R++P  N +   ++V+R +  G   GRRVWRRRKLTKKD+M  YK++RIPFLEEQVR+++
Sbjct: 30  RLNP--NLKCQCRVVSRFESEG--GGRRVWRRRKLTKKDEMLQYKLERIPFLEEQVRKIR 89

Query: 84  EQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILHVLSNRVNDA 143
           E GKL+TMDIERLLLSEDNRFDFVN+VAAEAK+Y+ESNRDEYGGTKKAILHVLSNRVND+
Sbjct: 90  EGGKLLTMDIERLLLSEDNRFDFVNDVAAEAKDYIESNRDEYGGTKKAILHVLSNRVNDS 149

Query: 144 GFYRPDAYAEDDPFKPGPHYLKQEFT 170
           GFYRPDAYAE DPFKPGP YLK+EFT
Sbjct: 150 GFYRPDAYAESDPFKPGPTYLKEEFT 171

The following BLAST results are available for this feature:
BLAST of CsGy3G019600 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146231.11.0e-88100.00PREDICTED: uncharacterized protein LOC101217841 [Cucumis sativus] >KGN57654.1 hy... [more]
XP_008455984.11.7e-8697.04PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucumis melo][more]
XP_016901917.16.8e-8097.42PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucumis melo][more]
XP_023553428.13.7e-7082.25protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucurbita pepo subsp. pep... [more]
XP_023553427.13.7e-7082.84protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucurbita pepo subsp. pep... [more]
BLAST of CsGy3G019600 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24314.26.0e-4662.84plastid transcriptionally active7[more]
BLAST of CsGy3G019600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8VZV9|PTA7_ARATH6.8e-4766.43Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PT... [more]
BLAST of CsGy3G019600 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L9J8|A0A0A0L9J8_CUCSA6.9e-89100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238200 PE=4 SV=1[more]
tr|A0A1S3C3E7|A0A1S3C3E7_CUCME1.1e-8697.04protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A1S4E109|A0A1S4E109_CUCME4.5e-8097.42protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A058ZXU2|A0A058ZXU2_EUCGR6.6e-5569.81Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00396 PE=4 SV... [more]
tr|A0A061G1Y5|A0A061G1Y5_THECC1.1e-5475.34Plastid transcriptionally active7 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_01... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042793transcription from plastid promoter
Vocabulary: Cellular Component
TermDefinition
GO:0000427plastid-encoded plastid RNA polymerase complex
Vocabulary: INTERPRO
TermDefinition
IPR038958PTAC7
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042793 transcription from plastid promoter
cellular_component GO:0005575 cellular_component
cellular_component GO:0000427 plastid-encoded plastid RNA polymerase complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G019600.1CsGy3G019600.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038958Protein plastid transcriptionally active 7PANTHERPTHR37257FAMILY NOT NAMEDcoord: 39..168

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G019600Cla004268Watermelon (97103) v1cgybwmB229
CsGy3G019600Csa3G238200Cucumber (Chinese Long) v2cgybcuB109
CsGy3G019600MELO3C019372Melon (DHL92) v3.5.1cgybmeB210
CsGy3G019600ClCG05G009050Watermelon (Charleston Gray)cgybwcgB214
CsGy3G019600CSPI03G19680Wild cucumber (PI 183967)cgybcpiB110
CsGy3G019600CmoCh16G000440Cucurbita moschata (Rifu)cgybcmoB304
CsGy3G019600Cp4.1LG14g06770Cucurbita pepo (Zucchini)cgybcpeB318
CsGy3G019600MELO3C019371.2Melon (DHL92) v3.6.1cgybmedB215
CsGy3G019600CsaV3_3G019730Cucumber (Chinese Long) v3cgybcucB117
CsGy3G019600Cla97C05G091370Watermelon (97103) v2cgybwmbB206
CsGy3G019600Bhi01G001127Wax gourdcgybwgoB271
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G019600Cucumber (Chinese Long) v3cgybcucB133
CsGy3G019600Watermelon (97103) v2cgybwmbB169
CsGy3G019600Wax gourdcgybwgoB251
CsGy3G019600Cucumber (Gy14) v2cgybcgybB088
CsGy3G019600Cucurbita maxima (Rimu)cgybcmaB333
CsGy3G019600Cucurbita maxima (Rimu)cgybcmaB354
CsGy3G019600Cucurbita maxima (Rimu)cgybcmaB357
CsGy3G019600Cucurbita moschata (Rifu)cgybcmoB326
CsGy3G019600Cucurbita moschata (Rifu)cgybcmoB328
CsGy3G019600Cucurbita pepo (Zucchini)cgybcpeB285
CsGy3G019600Cucurbita pepo (Zucchini)cgybcpeB289
CsGy3G019600Cucurbita pepo (Zucchini)cgybcpeB430
CsGy3G019600Bottle gourd (USVL1VR-Ls)cgyblsiB139
CsGy3G019600Bottle gourd (USVL1VR-Ls)cgyblsiB198
CsGy3G019600Melon (DHL92) v3.6.1cgybmedB142
CsGy3G019600Silver-seed gourdcarcgybB0543
CsGy3G019600Silver-seed gourdcarcgybB0545
CsGy3G019600Silver-seed gourdcarcgybB0974