CsaV3_3G019730 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G019730
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionprotein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1
Locationchr3 : 15571166 .. 15573709 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTTTGGATTGTTTTTACTGAAAAGAAAAAGGAAGTTTTTCTCATAATTTAGAAAAGGACAAATTTCTAAAGATTTTCGAGGATATGGGTTATTTATCAAAAAAGCGAGAGTTTTGGGAGAGCTCGCGTGACGAAAGTAATAACATCATTCGAAAATGAAGATAGGACAGCCATGGCTACTCCAATCTCAACACTCTCCTTTGCTTCCCCTGTAATCACTCTCCCTCTTTCTTTCTTCGTCCTTTGGTATCTCAAACTTTCATATGGATATTCTGTTCGATCCCTTCTTTTGTTCTTTACTTTCTCTTTCAAAATTCGTTCACTCGTGCTTATGTTTGGGTTTTCTTTCAGTCATTGCCGCTCAGGATTGAGGCGAATCCCCGAATTTCTCCTGCCTTGAACTTTCGTCCCCCGTTTCAGGTTTACATTTCATTGATTGTCTCAACAACCCCAACTTACTTATCTTCTCTTTTGCCTCTCATTCTTCGTGTTTTTCTTGTTTATGTTTTCAGTTGGTCGCTAGAAAACAGAAAAGTGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGGTATGGTGAATCTGTTTTATTCTTTCTCTTAACTTCTCCTCTACCCTCTTATCCTTTGTTTAATTTGTTTCCCATTTCGCGGCTTTGTGAAACTAGAGTCTTGCAATGTCGGGCTAATTCGACCTAAATTTTATTAAATGAAACAAAGAGTGAAACTGTGAAAGGAACTTGGTTTTGGTAGTAATAATTCTTGTATTACAACTGCCTGAAGCATTGGGAGTAGGAATTTCTCTCTTTCTTTCGGTGGCTCTTGTGAGTACAAGCATGCTCCTGCCTCTTGTTGGAGTGCATTACATAATCTTTTTATGATAACATACCATTTCTTTGATTAACCTATATTGGTTGTATTTCAGTTGGTAACTTTCCTCTATAATGGCCTCTTGGTTGTTATCTTTTTATATTTATTTTTCCTTAATATATGGTTTCTTCTATTAAGAGAGAGAGTTTTGTTCATGCCTCCTTGTGGTTAGTGTTTCTTTGCTATCAGTGTTGTATGTGAACTACAGTTTACAACAGAGATGTGTAAACTTTGGAAAAAGGTTATTTGGTCCTTTTGTGACGGTTATTGGAGATGTTATTGCTTGTTATAGCATCTTTTTTTATCAATGCAACCCCATCGTTTTTCATGGATAACTATCTAAATGGGGGTGTGTCATTTATGATTCTTCTTTCCAATCGATCAAACTTTGGTGGTTACTGATAATTAGGTGTCACGGGGTGATTCCCGAGTAGGAAATTCTTGTCTCTTTGGTCCTGACATTAGGATGCAAGCACCACAGATAGTAAAAAAACACTAGGGGATGTGGGGTTCTGGGTTCATGGTAGTATTCAAATCCTACAAGTTTCTTAGTAACATATTAGATCAGGCAGTTGTCTAGATGAAATCAGGCAAGATGTGTGAATCGGCTCTGATACTTCTAAGAAAAATAATGATATGGAATGCGCACTTAGTGTAGGATTAGGTGGAATAAAGGAAACATTGAGATGATTGATCACCTTCAACCAGACATTTGTGAATCTTACTACTTGCTATTGTAAGGATGCGAACTATGCAATATAATTTAGATGGAAAGGTTTAAATATTGGGAGTTTCTTGAAACAAATAGACGTCTGAGATCGTTTGGGATTATAGGCCACTTTCTGGCAGATCAAAATTTTTCTTCCAAAATTGAAGAATGGAATCTTTTTTGATATAGAACGACTTTGGGGAGAATTAGTTAAGATTATGTATCGTTATTTTGTAAGAGTTCGCTATGTTGTTGTTGACATTGAAACTTCTAATTTCATTCCTTATTCAGACAAAGAAGGATGACATGTCAATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAATCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTTGAGAGCAACCGCGATGAATATGGGGGTACCAAGAAAGCCATCCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGATGACCCATTTAAACCCGGACCTCATTATCTGAAACAAGAATTTACTTAACCTGATTACAAAATCCATTTTCTTATACAAACTGTCAATGCATTAATCTGATTTTTCCAGTTTTCAAATGTTAGCTAGTGCCTACGTCTCTTCTGATTAAGAATTGTGCTTGCCTCATCCTCACGAGTTTTTTCTCTAACCAAATATTACCTCTTTAAACTCCTACTTTTCTATTCGTTATGTTTCATCCAACATTCCCAATAGGAGGGAAGATTGTTATCGACCAACTAATGAAACCATTAGAAAGTTTCTTTTATGAACTCCATTTGTTGTTTTCCATGGTATAAAGCATTTAAAAGGGCCTATGAAGATAAATAATATATTATATAA

mRNA sequence

ATGGCTACTCCAATCTCAACACTCTCCTTTGCTTCCCCTTCATTGCCGCTCAGGATTGAGGCGAATCCCCGAATTTCTCCTGCCTTGAACTTTCGTCCCCCGTTTCAGTTGGTCGCTAGAAAACAGAAAAGTGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGATGACATGTCAATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAATCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTTGAGAGCAACCGCGATGAATATGGGGGTACCAAGAAAGCCATCCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGATGACCCATTTAAACCCGGACCTCATTATCTGAAACAAGAATTTACTTAA

Coding sequence (CDS)

ATGGCTACTCCAATCTCAACACTCTCCTTTGCTTCCCCTTCATTGCCGCTCAGGATTGAGGCGAATCCCCGAATTTCTCCTGCCTTGAACTTTCGTCCCCCGTTTCAGTTGGTCGCTAGAAAACAGAAAAGTGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGATGACATGTCAATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGGAAGCTCATAACAATGGACATTGAAAGACTATTATTATCAGAGGACAATCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCTAAGGAATATGTTGAGAGCAACCGCGATGAATATGGGGGTACCAAGAAAGCCATCCTTCATGTTCTTAGCAACCGAGTGAACGATGCAGGGTTTTATCGGCCAGATGCTTATGCAGAAGATGACCCATTTAAACCCGGACCTCATTATCTGAAACAAGAATTTACTTAA

Protein sequence

MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Homology
[Close]
BLAST of CsaV3_3G019730 vs. NCBI nr
Match: XP_004146231.1 (PREDICTED: uncharacterized protein LOC101217841 [Cucumis sativus] >KGN57654.1 hypothetical protein Csa_3G238200 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 6.2e-89
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60
           MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of CsaV3_3G019730 vs. NCBI nr
Match: XP_008455984.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucumis melo])

HSP 1 Score: 328.9 bits (842), Expect = 9.9e-87
Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 0 

Query: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60
           MATPISTLSFASP LPLRIEANPRISPALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of CsaV3_3G019730 vs. NCBI nr
Match: XP_016901917.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucumis melo])

HSP 1 Score: 307.0 bits (785), Expect = 4.0e-80
Identity = 151/155 (97.42%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 15  LPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 74
           LPLRIEANPRISPALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTKKDDMSIYKMDRIPF
Sbjct: 3   LPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 62

Query: 75  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILH 134
           LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGG+KKAILH
Sbjct: 63  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 122

Query: 135 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 123 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 157

[Close]
BLAST of CsaV3_3G019730 vs. NCBI nr
Match: XP_023553428.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.6 bits (701), Expect = 2.2e-70
Identity = 139/169 (82.25%), Postives = 149/169 (88.17%), Query Frame = 0 

Query: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60
           M TPI TLSFASP    RI+    IS   NF P  Q+ ARKQ+ GE  GRRVWRRRKLTK
Sbjct: 1   MTTPIPTLSFASP----RIQTRAGISHGFNFPPRLQMAARKQRDGEGVGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KD+MSI+KMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAK+YVE+
Sbjct: 61  KDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKDYVEN 120

Query: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 165

[Close]
BLAST of CsaV3_3G019730 vs. NCBI nr
Match: XP_023553427.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.6 bits (701), Expect = 2.2e-70
Identity = 140/169 (82.84%), Postives = 150/169 (88.76%), Query Frame = 0 

Query: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60
           M TPI TLSFASP L  RI+    IS   NF P  Q+ ARKQ+ GE  GRRVWRRRKLTK
Sbjct: 1   MTTPIPTLSFASP-LFQRIQTRAGISHGFNFPPRLQMAARKQRDGEGVGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KD+MSI+KMDRIPFLEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAK+YVE+
Sbjct: 61  KDEMSIFKMDRIPFLEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKDYVEN 120

Query: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAE+DPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEEDPFKPGPHYLKQEFT 168

[Close]
BLAST of CsaV3_3G019730 vs. TAIR10
Match: AT5G24314.2 (plastid transcriptionally active7)

HSP 1 Score: 181.8 bits (460), Expect = 3.5e-46
Identity = 93/148 (62.84%), Postives = 110/148 (74.32%), Query Frame = 0 

Query: 30  NFRPPFQLVARKQKSGEVSGRRVWRRRK--------LTKKDDMSIYKMDRIPFLEEQVRR 89
           N R  FQ         + +GRRVWRRR         LTKKDDM  YKM R+PF+EEQVR+
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLVSTKLDILTKKDDMLRYKMQRVPFVEEQVRK 81

Query: 90  VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILHVLSNRVN 149
           ++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGG+KKAI HVLSNRVN
Sbjct: 82  IREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVN 141

Query: 150 DAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           D GF RP+AY E DP+KPGP YL + +T
Sbjct: 142 DLGFDRPEAYVEADPYKPGPGYLLEYYT 169

[Close]
BLAST of CsaV3_3G019730 vs. Swiss-Prot
Match: sp|Q8VZV9|PTA7_ARATH (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PTAC7 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.0e-47
Identity = 93/140 (66.43%), Postives = 110/140 (78.57%), Query Frame = 0 

Query: 30  NFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI 89
           N R  FQ         + +GRRVWRRR LTKKDDM  YKM R+PF+EEQVR+++E GK++
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLTKKDDMLRYKMQRVPFVEEQVRKIREVGKVM 81

Query: 90  TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILHVLSNRVNDAGFYRPD 149
           TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGG+KKAI HVLSNRVND GF RP+
Sbjct: 82  TMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPE 141

Query: 150 AYAEDDPFKPGPHYLKQEFT 170
           AY E DP+KPGP YL + +T
Sbjct: 142 AYVEADPYKPGPGYLLEYYT 161

[Close]
BLAST of CsaV3_3G019730 vs. TrEMBL
Match: tr|A0A0A0L9J8|A0A0A0L9J8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238200 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 4.1e-89
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60
           MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of CsaV3_3G019730 vs. TrEMBL
Match: tr|A0A1S3C3E7|A0A1S3C3E7_CUCME (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496049 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 6.5e-87
Identity = 164/169 (97.04%), Postives = 168/169 (99.41%), Query Frame = 0 

Query: 1   MATPISTLSFASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTK 60
           MATPISTLSFASP LPLRIEANPRISPALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTK
Sbjct: 1   MATPISTLSFASPFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTK 60

Query: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120
           KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES
Sbjct: 61  KDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVES 120

Query: 121 NRDEYGGTKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           NRDEYGG+KKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 NRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of CsaV3_3G019730 vs. TrEMBL
Match: tr|A0A1S4E109|A0A1S4E109_CUCME (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496049 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.7e-80
Identity = 151/155 (97.42%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 15  LPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 74
           LPLRIEANPRISPALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTKKDDMSIYKMDRIPF
Sbjct: 3   LPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 62

Query: 75  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILH 134
           LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGG+KKAILH
Sbjct: 63  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 122

Query: 135 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 123 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 157

[Close]
BLAST of CsaV3_3G019730 vs. TrEMBL
Match: tr|A0A058ZXU2|A0A058ZXU2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00396 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.9e-55
Identity = 111/159 (69.81%), Postives = 134/159 (84.28%), Query Frame = 0 

Query: 11  ASPSLPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMD 70
           A+P+   +   N R +PAL+ + P  ++++    G   GRRVWRRRKLTKKDD+  YKM+
Sbjct: 16  AAPASSPKRSVNAR-APALSSKAPLLVISQSGSRGR--GRRVWRRRKLTKKDDLLQYKME 75

Query: 71  RIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKK 130
           RIPFLEEQ R++KE GKL+TMDIERLLLSEDNRFDF+N+VAAEAKEYVE+NRDEYGGTKK
Sbjct: 76  RIPFLEEQERKIKETGKLLTMDIERLLLSEDNRFDFINDVAAEAKEYVENNRDEYGGTKK 135

Query: 131 AILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 170
           AILHVLSNRVND+GFYRP+AY+E DPF+PGP YLK+EFT
Sbjct: 136 AILHVLSNRVNDSGFYRPEAYSESDPFRPGPGYLKEEFT 171

[Close]
BLAST of CsaV3_3G019730 vs. TrEMBL
Match: tr|A0A061G1Y5|A0A061G1Y5_THECC (Plastid transcriptionally active7 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_015438 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 6.6e-55
Identity = 110/146 (75.34%), Postives = 129/146 (88.36%), Query Frame = 0 

Query: 24  RISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVK 83
           R++P  N +   ++V+R +  G   GRRVWRRRKLTKKD+M  YK++RIPFLEEQVR+++
Sbjct: 30  RLNP--NLKCQCRVVSRFESEG--GGRRVWRRRKLTKKDEMLQYKLERIPFLEEQVRKIR 89

Query: 84  EQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILHVLSNRVNDA 143
           E GKL+TMDIERLLLSEDNRFDFVN+VAAEAK+Y+ESNRDEYGGTKKAILHVLSNRVND+
Sbjct: 90  EGGKLLTMDIERLLLSEDNRFDFVNDVAAEAKDYIESNRDEYGGTKKAILHVLSNRVNDS 149

Query: 144 GFYRPDAYAEDDPFKPGPHYLKQEFT 170
           GFYRPDAYAE DPFKPGP YLK+EFT
Sbjct: 150 GFYRPDAYAESDPFKPGPTYLKEEFT 171

The following BLAST results are available for this feature:
BLAST of CsaV3_3G019730 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146231.16.2e-89100.00PREDICTED: uncharacterized protein LOC101217841 [Cucumis sativus] >KGN57654.1 hy... [more]
XP_008455984.19.9e-8797.04PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucumis melo][more]
XP_016901917.14.0e-8097.42PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucumis melo][more]
XP_023553428.12.2e-7082.25protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucurbita pepo subsp. pep... [more]
XP_023553427.12.2e-7082.84protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucurbita pepo subsp. pep... [more]
BLAST of CsaV3_3G019730 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24314.23.5e-4662.84plastid transcriptionally active7[more]
BLAST of CsaV3_3G019730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8VZV9|PTA7_ARATH4.0e-4766.43Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PT... [more]
BLAST of CsaV3_3G019730 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L9J8|A0A0A0L9J8_CUCSA4.1e-89100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238200 PE=4 SV=1[more]
tr|A0A1S3C3E7|A0A1S3C3E7_CUCME6.5e-8797.04protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A1S4E109|A0A1S4E109_CUCME2.7e-8097.42protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A058ZXU2|A0A058ZXU2_EUCGR3.9e-5569.81Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00396 PE=4 SV... [more]
tr|A0A061G1Y5|A0A061G1Y5_THECC6.6e-5575.34Plastid transcriptionally active7 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_01... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0042793transcription from plastid promoter
Vocabulary: Cellular Component
TermDefinition
GO:0000427plastid-encoded plastid RNA polymerase complex
Vocabulary: INTERPRO
TermDefinition
IPR038958PTAC7
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042793 transcription from plastid promoter
biological_process GO:0008152 metabolic process
biological_process GO:0010286 heat acclimation
biological_process GO:0010468 regulation of gene expression
biological_process GO:0006970 response to osmotic stress
biological_process GO:0008150 biological_process
cellular_component GO:0000427 plastid-encoded plastid RNA polymerase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G019730.1CsaV3_3G019730.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038958Protein plastid transcriptionally active 7PANTHERPTHR37257FAMILY NOT NAMEDcoord: 39..168

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G019730CSPI03G19680Wild cucumber (PI 183967)cpicucB144
CsaV3_3G019730Cucsa.032280Cucumber (Gy14) v1cgycucB006
CsaV3_3G019730CmoCh16G000440Cucurbita moschata (Rifu)cmocucB0373
CsaV3_3G019730Cp4.1LG14g06770Cucurbita pepo (Zucchini)cpecucB0248
CsaV3_3G019730CsGy3G019600Cucumber (Gy14) v2cgybcucB117
CsaV3_3G019730Cla004268Watermelon (97103) v1cucwmB252
CsaV3_3G019730MELO3C019372Melon (DHL92) v3.5.1cucmeB247
CsaV3_3G019730ClCG05G009050Watermelon (Charleston Gray)cucwcgB238
CsaV3_3G019730MELO3C019371.2Melon (DHL92) v3.6.1cucmedB246
CsaV3_3G019730Cla97C05G091370Watermelon (97103) v2cucwmbB217
CsaV3_3G019730Bhi01G001127Wax gourdcucwgoB287
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G019730Cucumber (Chinese Long) v3cuccucB123
CsaV3_3G019730Silver-seed gourdcarcucB0574
CsaV3_3G019730Silver-seed gourdcarcucB0576
CsaV3_3G019730Silver-seed gourdcarcucB1030
CsaV3_3G019730Cucumber (Gy14) v2cgybcucB213
CsaV3_3G019730Cucumber (Gy14) v1cgycucB326
CsaV3_3G019730Cucurbita maxima (Rimu)cmacucB0334
CsaV3_3G019730Cucurbita maxima (Rimu)cmacucB0374
CsaV3_3G019730Cucurbita maxima (Rimu)cmacucB0489
CsaV3_3G019730Cucurbita maxima (Rimu)cmacucB0491
CsaV3_3G019730Cucurbita maxima (Rimu)cmacucB0723
CsaV3_3G019730Cucurbita moschata (Rifu)cmocucB0328
CsaV3_3G019730Cucurbita moschata (Rifu)cmocucB0478
CsaV3_3G019730Cucurbita moschata (Rifu)cmocucB0480
CsaV3_3G019730Cucurbita moschata (Rifu)cmocucB0710
CsaV3_3G019730Cucurbita pepo (Zucchini)cpecucB0036
CsaV3_3G019730Cucurbita pepo (Zucchini)cpecucB0041
CsaV3_3G019730Cucurbita pepo (Zucchini)cpecucB0204
CsaV3_3G019730Cucurbita pepo (Zucchini)cpecucB0899
CsaV3_3G019730Wild cucumber (PI 183967)cpicucB266
CsaV3_3G019730Bottle gourd (USVL1VR-Ls)cuclsiB165
CsaV3_3G019730Bottle gourd (USVL1VR-Ls)cuclsiB230
CsaV3_3G019730Melon (DHL92) v3.5.1cucmeB171
CsaV3_3G019730Melon (DHL92) v3.6.1cucmedB161
CsaV3_3G019730Watermelon (Charleston Gray)cucwcgB208
CsaV3_3G019730Watermelon (97103) v1cucwmB268
CsaV3_3G019730Watermelon (97103) v2cucwmbB175
CsaV3_3G019730Wax gourdcucwgoB266