MELO3C018566 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018566
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRING finger protein 126
Locationchr1 : 1140666 .. 1141448 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCACAAATCTTTAATATTTGTAGGAATCGTCCCTTCGTCGGTATGTCACTAGAAATCAACGATTCCATCACGAGCATGAATCGAACACGAAAACGGATACGAACTCGACAAAACTCATCAAAATATGTCCAACACATCGACCTTAATTTCAAAGTCCAACTCAAATGCTCTCACTTTCTAGTATATGAAGATGGCATAACCACTACCACAAGTTTCCTTAATGAACACACATCTCGACCACATCCTTTAGCAACTTACAAACTTCCCATCTCCATCTTCAAGCATGGTGACAAAGCTTTGGAGCAATATCTTTTCCATAAGTTCCATGTCTATCGAGAATTCATCAACACAACACTCGTGGCTGATAGACTAATACAGCATTGGGTTAAAAGAGTCGAAGAAGATGATCATGAACACCAAGAGGAGAATAATAATCACGACTTTAATGTATTTCAAAAGATTTATCCTCTCGAAATTACATTAGAGATGCGGATCATTCAGAGGTATGTCGAAGAATCACCGATAATGATAATGGTTCCAACCAGTGACAGTGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATTGGGATGACGAAGGAATTAATTGTGTAATTTGTTTGGAGGAAATAAGTAGTAAAGAGGAGGAAGAAAGTGAGAAATCAGTGTTGCAGATGCCATGTTTGCATATGTTTCATGGAGAATGTATAAATAAATGGTTGAAGACGAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

mRNA sequence

ATGGCAGCACAAATCTTTAATATTTGTAGGAATCGTCCCTTCGTCGGTATGTCACTAGAAATCAACGATTCCATCACGAGCATGAATCGAACACGAAAACGGATACGAACTCGACAAAACTCATCAAAATATGTCCAACACATCGACCTTAATTTCAAAGTCCAACTCAAATGCTCTCACTTTCTAGTATATGAAGATGGCATAACCACTACCACAAGTTTCCTTAATGAACACACATCTCGACCACATCCTTTAGCAACTTACAAACTTCCCATCTCCATCTTCAAGCATGGTGACAAAGCTTTGGAGCAATATCTTTTCCATAAGTTCCATGTCTATCGAGAATTCATCAACACAACACTCGTGGCTGATAGACTAATACAGCATTGGGTTAAAAGAGTCGAAGAAGATGATCATGAACACCAAGAGGAGAATAATAATCACGACTTTAATGTATTTCAAAAGATTTATCCTCTCGAAATTACATTAGAGATGCGGATCATTCAGAGGTATGTCGAAGAATCACCGATAATGATAATGGTTCCAACCAGTGACAGTGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATTGGGATGACGAAGGAATTAATTGTGTAATTTGTTTGGAGGAAATAAGTAGTAAAGAGGAGGAAGAAAGTGAGAAATCAGTGTTGCAGATGCCATGTTTGCATATGTTTCATGGAGAATGTATAAATAAATGGTTGAAGACGAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

Coding sequence (CDS)

ATGGCAGCACAAATCTTTAATATTTGTAGGAATCGTCCCTTCGTCGGTATGTCACTAGAAATCAACGATTCCATCACGAGCATGAATCGAACACGAAAACGGATACGAACTCGACAAAACTCATCAAAATATGTCCAACACATCGACCTTAATTTCAAAGTCCAACTCAAATGCTCTCACTTTCTAGTATATGAAGATGGCATAACCACTACCACAAGTTTCCTTAATGAACACACATCTCGACCACATCCTTTAGCAACTTACAAACTTCCCATCTCCATCTTCAAGCATGGTGACAAAGCTTTGGAGCAATATCTTTTCCATAAGTTCCATGTCTATCGAGAATTCATCAACACAACACTCGTGGCTGATAGACTAATACAGCATTGGGTTAAAAGAGTCGAAGAAGATGATCATGAACACCAAGAGGAGAATAATAATCACGACTTTAATGTATTTCAAAAGATTTATCCTCTCGAAATTACATTAGAGATGCGGATCATTCAGAGGTATGTCGAAGAATCACCGATAATGATAATGGTTCCAACCAGTGACAGTGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATTGGGATGACGAAGGAATTAATTGTGTAATTTGTTTGGAGGAAATAAGTAGTAAAGAGGAGGAAGAAAGTGAGAAATCAGTGTTGCAGATGCCATGTTTGCATATGTTTCATGGAGAATGTATAAATAAATGGTTGAAGACGAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

Protein sequence

MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSHFLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTTLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMIMVPTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN*
Homology
[Close]
BLAST of MELO3C018566 vs. Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.5e-09
Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 1 

Query: 182 PTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINK 241
           P + + +ES+ R V      E + C +CL E       E E++V++MPC H+FH  CI  
Sbjct: 65  PAAKAVVESLPRTVIRSSKAE-LKCPVCLLEF------EEEETVIEMPCHHLFHSNCILP 124

Query: 242 WLKTSHYCPTCRFSMPTNN 261
           WL  ++ CP CR  +PT++
Sbjct: 125 WLSKTNSCPLCRHELPTDD 136

[Close]
BLAST of MELO3C018566 vs. Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 28/79 (35.44%), Postives = 45/79 (56.96%), Query Frame = 1 

Query: 182 PTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINK 241
           P + + +ES+ R V +    + + C +CL E       E+E++V++MPC H+FH  CI  
Sbjct: 65  PAAKAVVESLPRTVISSAKAD-LKCPVCLLEF------EAEETVIEMPCHHLFHSNCILP 124

Query: 242 WLKTSHYCPTCRFSMPTNN 261
           WL  ++ CP CR  +PT++
Sbjct: 125 WLSKTNSCPLCRHELPTDD 136

[Close]
BLAST of MELO3C018566 vs. Swiss-Prot
Match: RN181_HUMAN (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-08
Identity = 27/79 (34.18%), Postives = 43/79 (54.43%), Query Frame = 1 

Query: 182 PTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINK 241
           P + + +E++ R V      E + C +CL E       E E++ ++MPC H+FH  CI  
Sbjct: 53  PAAKTVVENLPRTVIRGSQAE-LKCPVCLLEF------EEEETAIEMPCHHLFHSSCILP 112

Query: 242 WLKTSHYCPTCRFSMPTNN 261
           WL  ++ CP CR+ +PT++
Sbjct: 113 WLSKTNSCPLCRYELPTDD 124

[Close]
BLAST of MELO3C018566 vs. Swiss-Prot
Match: RN181_BOVIN (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-08
Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 1 

Query: 182 PTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINK 241
           P + +A+E++ R V      E + C +CL E       E E++ ++MPC H+FH  CI  
Sbjct: 53  PAAKTAVENLPRTVIRGSQAE-LKCPVCLLEF------EEEETAIEMPCHHLFHSNCILP 112

Query: 242 WLKTSHYCPTCRFSMPTNN 261
           WL  ++ CP CR  +PT++
Sbjct: 113 WLSKTNSCPLCRHELPTDD 124

[Close]
BLAST of MELO3C018566 vs. Swiss-Prot
Match: ATL66_ARATH (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana GN=ATL66 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.1e-07
Identity = 28/75 (37.33%), Postives = 37/75 (49.33%), Query Frame = 1 

Query: 182 PTSDSAIESMLRRVENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINK 241
           P    ++  +L R E   ++E   C ICL        EE EK  +  PC H +H EC+++
Sbjct: 83  PAEIRSLPVVLCRRERAEEEEEKECCICLGGF-----EEGEKMKVLPPCSHCYHCECVDR 142

Query: 242 WLKTSHYCPTCRFSM 257
           WLKT   CP CR S+
Sbjct: 143 WLKTESSCPLCRVSI 152

[Close]
BLAST of MELO3C018566 vs. TrEMBL
Match: A0A0A0K7L5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068590 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 3.4e-113
Identity = 206/268 (76.87%), Postives = 232/268 (86.57%), Query Frame = 1 

Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MAAQIF++C NRPFVGMSL+I DSITS++RTRKRIRTR+NSSKYV+HIDLNFKVQL+C+H
Sbjct: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60

Query: 61  FLV-YEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINT 120
            L  YEDGI TTTSFL+EHTS  HPLATY+LPISIFK+G+  LEQYL  + H +RE I+ 
Sbjct: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120

Query: 121 TLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMI 180
           TLVADR+IQHWVK+VEEDD +H EE NN DFNVFQKI+ LEITLEM+I +RYV ESP+MI
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180

Query: 181 MVPTSDSAIESMLRRVEND------WDDEGINCVICLEEISS-KEEEESEKSVLQMPCLH 240
           MVPTSD AIESMLRRVEND       D+EGI C ICLEEISS KEEE SEKSVLQMPCLH
Sbjct: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240

Query: 241 MFHGECINKWLKTSHYCPTCRFSMPTNN 261
           MFH ECI+KWL+TSHYCPTCRFSMPTNN
Sbjct: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 268

[Close]
BLAST of MELO3C018566 vs. TrEMBL
Match: A0A0A0K2A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.0e-73
Identity = 144/267 (53.93%), Postives = 190/267 (71.16%), Query Frame = 1 

Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MA +IF+ CR   ++GM L I D      R + +IRTR+NS  + + IDLNF+VQLKC H
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
           F + E+  + TT+ ++EH    HP AT++LPISI +HGDK L+  LF +FH+YR+ IN  
Sbjct: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIE 120

Query: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQ--RYVEESP-I 180
            + D +I++WV +VEE   E +++ N+    VF+KIY LEITLE+ I Q  R ++  P +
Sbjct: 121 HLVDEIIKYWVTKVEE---EEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQV 180

Query: 181 MIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVLQMPCLH 240
           ++MVPTSDSA+ESML+RVEN+      DD+ I+CVICLEEI  KEE+ SE  VLQMPCLH
Sbjct: 181 LMMVPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEI-GKEEKGSEGVVLQMPCLH 240

Query: 241 MFHGECINKWLKTSHYCPTCRFSMPTN 260
           +FHGECINKWL TSHYCPTCRF MP N
Sbjct: 241 VFHGECINKWLNTSHYCPTCRFPMPIN 263

[Close]
BLAST of MELO3C018566 vs. TrEMBL
Match: A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.1e-69
Identity = 144/278 (51.80%), Postives = 189/278 (67.99%), Query Frame = 1 

Query: 1   MAAQIFNICR--NRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKC 60
           MA QIF  CR  +  ++GMSL I D     ++ + +IRT  NS   V+ IDLNFKV++KC
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDP-DLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  SHFLVYEDGITTT--TSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREF 120
            H+    +G  +T  T+ L+EH S  HPL T +LP+SIFKHGDK L++ LF +F +YR  
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 INTTLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQ------- 180
           IN  LV D +I+HWVK+V+E++   Q         VF++IYPLEIT+E+ + Q       
Sbjct: 121 INIELVVDEIIKHWVKKVDEENSTSQ---------VFEEIYPLEITIELLVYQMIHAIDQ 180

Query: 181 --RYVEESPIMIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESE 240
               + + P ++MVPTS+SA+ESML++VEN+      D++ INCVICLEEI SKE++ SE
Sbjct: 181 PHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEI-SKEKKGSE 240

Query: 241 KSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
             VLQMPCLHMFH ECI KWLK SHYCPTCRFSMPTNN
Sbjct: 241 AVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]
BLAST of MELO3C018566 vs. TrEMBL
Match: E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 9.6e-68
Identity = 147/273 (53.85%), Postives = 188/273 (68.86%), Query Frame = 1 

Query: 1   MAAQIFNICR--NRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKC 60
           MA +IFNICR  +  ++GMSL I D         +  +T  +S   V+ I L FKVQLKC
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQT--SSPTLVEQICLKFKVQLKC 60

Query: 61  SHFLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFIN 120
            HF V+E G   +T+ + EH    H  AT++LPISIFKHGDK L++ LF +F +Y + IN
Sbjct: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120

Query: 121 TTLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQ--RYVEESP 180
             L+A+ +I+HWV++VEE+  E QE N+N    +F+KIYPLEI + + + +  R V+   
Sbjct: 121 IELLANEIIKHWVRKVEEE--EDQENNSN---VLFKKIYPLEIMIRLLVSKMIRAVQPRL 180

Query: 181 IMI----MVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVLQ 240
            MI    MVPTSDSA+ESML+RVEN+      DDE INCV+CLEEI SKEE+ SE +VLQ
Sbjct: 181 AMIDQPLMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEI-SKEEKGSETTVLQ 240

Query: 241 MPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
           MPCLHMFH ECI KWLKTSHYCPTCRFSMP +N
Sbjct: 241 MPCLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]
BLAST of MELO3C018566 vs. TrEMBL
Match: A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.2e-67
Identity = 142/273 (52.01%), Postives = 183/273 (67.03%), Query Frame = 1 

Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MA Q F+ C +  ++GMSL I D I          +TR NS   V+ IDLNFKV++KC H
Sbjct: 1   MAEQNFDDCTSGYYMGMSLRITDPI----------QTRSNSPTSVKQIDLNFKVEVKCQH 60

Query: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
           F   E+  T  T+FL+EH     P    +LP+SIFKHGDK L++ LF KF ++R  IN  
Sbjct: 61  FQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIE 120

Query: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQ--------RYV 180
           LV D++I+HWVK+VE+D     +ENN+    VF++IYPLEIT+E+ ++Q        +  
Sbjct: 121 LVTDQIIKHWVKKVEDD-----KENNS---GVFEEIYPLEITIEVLVLQMIDAVDQPQET 180

Query: 181 EESPIMIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVLQ 240
            + P + MVPTSDSA++SML+RVEN+      D + I+CVICLE+I SKEE+ SE  VLQ
Sbjct: 181 IDQPQVRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKI-SKEEKGSEGVVLQ 240

Query: 241 MPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
           MPCLHMFH ECI KWLKTSHYCPTCRFSM  NN
Sbjct: 241 MPCLHMFHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]
BLAST of MELO3C018566 vs. TAIR10
Match: AT1G26800.1 (AT1G26800.1 RING/U-box superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 44/106 (41.51%), Postives = 56/106 (52.83%), Query Frame = 1 

Query: 154 QKIYPLEITLEMRIIQRYVEESPIMIMVPTSDSAIESMLRRVENDWDDEGINCVICLEEI 213
           Q +  LE +  M  + R + ES      P S ++I++M   VE D   EG  CVICLEE 
Sbjct: 64  QGMIVLEGSSGMNPLLRSLLESREEGRPPASKASIDAM-PIVEID-GCEG-ECVICLEEW 123

Query: 214 SSKEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTN 260
                 +SE++V +MPC H FHG CI KWL     CP CR+ MP +
Sbjct: 124 ------KSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]
BLAST of MELO3C018566 vs. TAIR10
Match: AT1G18770.1 (AT1G18770.1 RING/U-box superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 4.8e-10
Identity = 29/77 (37.66%), Postives = 41/77 (53.25%), Query Frame = 1 

Query: 182 PTSDSAIESMLRRV-ENDWDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMFHGECIN 241
           P S   ++S+ R++ +      G  C+ICLEE S        + V+ +PC H F  EC+ 
Sbjct: 34  PASKLVVKSLARKIYKMTTSSTGEMCIICLEEFSEG------RRVVTLPCGHDFDDECVL 93

Query: 242 KWLKTSHYCPTCRFSMP 258
           KW +T+H CP CRF +P
Sbjct: 94  KWFETNHSCPLCRFKLP 104

[Close]
BLAST of MELO3C018566 vs. TAIR10
Match: AT1G74620.1 (AT1G74620.1 RING/U-box superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 25/52 (48.08%), Postives = 31/52 (59.62%), Query Frame = 1 

Query: 206 CVICLEEISSKEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMP 258
           C IC+E+       E    V ++PC H FHG+CINKWL+ +H CP CR S+P
Sbjct: 183 CAICMEDYI-----EGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIP 229

[Close]
BLAST of MELO3C018566 vs. TAIR10
Match: AT5G37280.1 (AT5G37280.1 RING/U-box superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 35/112 (31.25%), Postives = 62/112 (55.36%), Query Frame = 1 

Query: 149 DFNVFQKIYPLEITLEMRIIQ--RYVEESPIMIMVPTSDSAIESMLRRVENDWDDEGIN- 208
           ++ ++Q+  P  +T+++R+I+  R++  SP+    P+S + ++   R +E    +  ++ 
Sbjct: 101 NYTLYQR--PFLMTVKVRVIKEVRFIV-SPVS--APSSGAPVDVFQRLLEEQTVEPSMDS 160

Query: 209 ---CVICLEEISSKEEEESEKSVLQMP-CLHMFHGECINKWLKTSHYCPTCR 254
              C IC E++S    E    S++QMP CLH FH +CI KW+   + CP CR
Sbjct: 161 DESCSICFEKLSDSLSETYHNSIIQMPKCLHSFHQKCIFKWIGRQNSCPLCR 207

[Close]
BLAST of MELO3C018566 vs. TAIR10
Match: AT4G18110.1 (AT4G18110.1 RING/U-box superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09
Identity = 38/109 (34.86%), Postives = 57/109 (52.29%), Query Frame = 1 

Query: 154 QKIYPLEITLEMRIIQRYVEESP---IMIMVPTSDSAIESMLRRVENDWDDEGI------ 213
           Q I P +I  ++  I+R++EE      ++ V      + S   RV ND+D +G       
Sbjct: 96  QSIVP-KICEDLIDIRRHLEEEEKDGFLVEVEVVLETLYSDWLRV-NDYDSQGCLIPIEE 155

Query: 214 NCVICLEEISSKEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCR 254
            C+ICLEE++S     SE+ ++++ C H FH +CI  WL+    CPTCR
Sbjct: 156 ECIICLEELAS---SGSERRIMKLLCSHSFHKDCILPWLRCKRSCPTCR 199

[Close]
BLAST of MELO3C018566 vs. NCBI nr
Match: gi|659111001|ref|XP_008455524.1| (PREDICTED: RING-H2 finger protein ATL30-like [Cucumis melo])

HSP 1 Score: 489.6 bits (1259), Expect = 3.5e-135
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1 

Query: 28  MNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSHFLVYEDGITTTTSFLNEHTSRPHPLAT 87
           MNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSHFLVYEDGITTTTSFLNEHTSRPHPLAT
Sbjct: 1   MNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSHFLVYEDGITTTTSFLNEHTSRPHPLAT 60

Query: 88  YKLPISIFKHGDKALEQYLFHKFHVYREFINTTLVADRLIQHWVKRVEEDDHEHQEENNN 147
           YKLPISIFKHGDKALEQYLFHKFHVYREFINTTLVADRLIQHWVKRVEEDDHEHQEENNN
Sbjct: 61  YKLPISIFKHGDKALEQYLFHKFHVYREFINTTLVADRLIQHWVKRVEEDDHEHQEENNN 120

Query: 148 HDFNVFQKIYPLEITLEMRIIQRYVEESPIMIMVPTSDSAIESMLRRVENDWDDEGINCV 207
           HDFNVFQKIYPLEITLEMRIIQRYVEESPIMIMVPTSDSAIESMLRRVENDWDDEGINCV
Sbjct: 121 HDFNVFQKIYPLEITLEMRIIQRYVEESPIMIMVPTSDSAIESMLRRVENDWDDEGINCV 180

Query: 208 ICLEEISSKEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
           ICLEEISSKEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN
Sbjct: 181 ICLEEISSKEEEESEKSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 233

[Close]
BLAST of MELO3C018566 vs. NCBI nr
Match: gi|778730185|ref|XP_011659722.1| (PREDICTED: uncharacterized protein LOC105436242 [Cucumis sativus])

HSP 1 Score: 416.0 bits (1068), Expect = 4.9e-113
Identity = 206/268 (76.87%), Postives = 232/268 (86.57%), Query Frame = 1 

Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MAAQIF++C NRPFVGMSL+I DSITS++RTRKRIRTR+NSSKYV+HIDLNFKVQL+C+H
Sbjct: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60

Query: 61  FLV-YEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINT 120
            L  YEDGI TTTSFL+EHTS  HPLATY+LPISIFK+G+  LEQYL  + H +RE I+ 
Sbjct: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120

Query: 121 TLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQRYVEESPIMI 180
           TLVADR+IQHWVK+VEEDD +H EE NN DFNVFQKI+ LEITLEM+I +RYV ESP+MI
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180

Query: 181 MVPTSDSAIESMLRRVEND------WDDEGINCVICLEEISS-KEEEESEKSVLQMPCLH 240
           MVPTSD AIESMLRRVEND       D+EGI C ICLEEISS KEEE SEKSVLQMPCLH
Sbjct: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240

Query: 241 MFHGECINKWLKTSHYCPTCRFSMPTNN 261
           MFH ECI+KWL+TSHYCPTCRFSMPTNN
Sbjct: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 268

[Close]
BLAST of MELO3C018566 vs. NCBI nr
Match: gi|700188572|gb|KGN43805.1| (hypothetical protein Csa_7G068580 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 2.9e-73
Identity = 144/267 (53.93%), Postives = 190/267 (71.16%), Query Frame = 1 

Query: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60
           MA +IF+ CR   ++GM L I D      R + +IRTR+NS  + + IDLNF+VQLKC H
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120
           F + E+  + TT+ ++EH    HP AT++LPISI +HGDK L+  LF +FH+YR+ IN  
Sbjct: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIE 120

Query: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQ--RYVEESP-I 180
            + D +I++WV +VEE   E +++ N+    VF+KIY LEITLE+ I Q  R ++  P +
Sbjct: 121 HLVDEIIKYWVTKVEE---EEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQV 180

Query: 181 MIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVLQMPCLH 240
           ++MVPTSDSA+ESML+RVEN+      DD+ I+CVICLEEI  KEE+ SE  VLQMPCLH
Sbjct: 181 LMMVPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEI-GKEEKGSEGVVLQMPCLH 240

Query: 241 MFHGECINKWLKTSHYCPTCRFSMPTN 260
           +FHGECINKWL TSHYCPTCRF MP N
Sbjct: 241 VFHGECINKWLNTSHYCPTCRFPMPIN 263

[Close]
BLAST of MELO3C018566 vs. NCBI nr
Match: gi|700188568|gb|KGN43801.1| (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 269.2 bits (687), Expect = 7.3e-69
Identity = 144/278 (51.80%), Postives = 189/278 (67.99%), Query Frame = 1 

Query: 1   MAAQIFNICR--NRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKC 60
           MA QIF  CR  +  ++GMSL I D     ++ + +IRT  NS   V+ IDLNFKV++KC
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDP-DLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  SHFLVYEDGITTT--TSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREF 120
            H+    +G  +T  T+ L+EH S  HPL T +LP+SIFKHGDK L++ LF +F +YR  
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 INTTLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQ------- 180
           IN  LV D +I+HWVK+V+E++   Q         VF++IYPLEIT+E+ + Q       
Sbjct: 121 INIELVVDEIIKHWVKKVDEENSTSQ---------VFEEIYPLEITIELLVYQMIHAIDQ 180

Query: 181 --RYVEESPIMIMVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESE 240
               + + P ++MVPTS+SA+ESML++VEN+      D++ INCVICLEEI SKE++ SE
Sbjct: 181 PHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEI-SKEKKGSE 240

Query: 241 KSVLQMPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
             VLQMPCLHMFH ECI KWLK SHYCPTCRFSMPTNN
Sbjct: 241 AVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]
BLAST of MELO3C018566 vs. NCBI nr
Match: gi|659111003|ref|XP_008455525.1| (PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo])

HSP 1 Score: 265.0 bits (676), Expect = 1.4e-67
Identity = 147/273 (53.85%), Postives = 188/273 (68.86%), Query Frame = 1 

Query: 1   MAAQIFNICR--NRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKC 60
           MA +IFNICR  +  ++GMSL I D         +  +T  +S   V+ I L FKVQLKC
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQT--SSPTLVEQICLKFKVQLKC 60

Query: 61  SHFLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFIN 120
            HF V+E G   +T+ + EH    H  AT++LPISIFKHGDK L++ LF +F +Y + IN
Sbjct: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120

Query: 121 TTLVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQ--RYVEESP 180
             L+A+ +I+HWV++VEE+  E QE N+N    +F+KIYPLEI + + + +  R V+   
Sbjct: 121 IELLANEIIKHWVRKVEEE--EDQENNSN---VLFKKIYPLEIMIRLLVSKMIRAVQPRL 180

Query: 181 IMI----MVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVLQ 240
            MI    MVPTSDSA+ESML+RVEN+      DDE INCV+CLEEI SKEE+ SE +VLQ
Sbjct: 181 AMIDQPLMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEI-SKEEKGSETTVLQ 240

Query: 241 MPCLHMFHGECINKWLKTSHYCPTCRFSMPTNN 261
           MPCLHMFH ECI KWLKTSHYCPTCRFSMP +N
Sbjct: 241 MPCLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

The following BLAST results are available for this feature:
BLAST of MELO3C018566 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RN181_RAT8.5e-0936.71E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1[more]
RN181_MOUSE1.1e-0835.44E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1[more]
RN181_HUMAN1.9e-0834.18E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1[more]
RN181_BOVIN1.9e-0835.44E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2 SV=1[more]
ATL66_ARATH6.1e-0737.33RING-H2 finger protein ATL66 OS=Arabidopsis thaliana GN=ATL66 PE=2 SV=1[more]
BLAST of MELO3C018566 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7L5_CUCSA3.4e-11376.87Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068590 PE=4 SV=1[more]
A0A0A0K2A5_CUCSA2.0e-7353.93Uncharacterized protein OS=Cucumis sativus GN=Csa_7G068580 PE=4 SV=1[more]
A0A0A0K7L0_CUCSA5.1e-6951.80Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067560 PE=4 SV=1[more]
E5GCQ3_CUCME9.6e-6853.85Hypothetical zinc finger protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0K2A1_CUCSA8.2e-6752.01Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067550 PE=4 SV=1[more]
BLAST of MELO3C018566 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G26800.12.2e-1041.51 RING/U-box superfamily protein[more]
AT1G18770.14.8e-1037.66 RING/U-box superfamily protein[more]
AT1G74620.11.1e-0948.08 RING/U-box superfamily protein[more]
AT5G37280.11.1e-0931.25 RING/U-box superfamily protein[more]
AT4G18110.11.8e-0934.86 RING/U-box superfamily protein[more]
BLAST of MELO3C018566 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659111001|ref|XP_008455524.1|3.5e-135100.00PREDICTED: RING-H2 finger protein ATL30-like [Cucumis melo][more]
gi|778730185|ref|XP_011659722.1|4.9e-11376.87PREDICTED: uncharacterized protein LOC105436242 [Cucumis sativus][more]
gi|700188572|gb|KGN43805.1|2.9e-7353.93hypothetical protein Csa_7G068580 [Cucumis sativus][more]
gi|700188568|gb|KGN43801.1|7.3e-6951.80hypothetical protein Csa_7G067560 [Cucumis sativus][more]
gi|659111003|ref|XP_008455525.1|1.4e-6753.85PREDICTED: uncharacterized protein LOC103495676 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0044267 cellular protein metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018566T1MELO3C018566T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 205..253
score: 2.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 206..252
score: 5.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 206..253
score: 1
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 205..253
score: 0.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 190..258
score: 3.9
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 143..260
score: 8.5
NoneNo IPR availablePANTHERPTHR22763:SF78E3 UBIQUITIN-PROTEIN LIGASE RHA2Acoord: 143..260
score: 8.5
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 196..257
score: 3.53

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C018566Csa7G067540Cucumber (Chinese Long) v2cumeB530
MELO3C018566Bhi05G000815Wax gourdmewgoB218
MELO3C018566CSPI07G06330Wild cucumber (PI 183967)cpimeB538
MELO3C018566Cucsa.218660Cucumber (Gy14) v1cgymeB379
MELO3C018566Lsi03G006560Bottle gourd (USVL1VR-Ls)lsimeB251
MELO3C018566Cp4.1LG15g04030Cucurbita pepo (Zucchini)cpemeB225
MELO3C018566CsGy7G005960Cucumber (Gy14) v2cgybmeB468
MELO3C018566Carg16308Silver-seed gourdcarmeB0460
MELO3C018566CsaV3_7G007310Cucumber (Chinese Long) v3cucmeB548
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018566Watermelon (97103) v2mewmbB174
MELO3C018566Watermelon (97103) v2mewmbB180
MELO3C018566Watermelon (97103) v2mewmbB224
MELO3C018566Wax gourdmewgoB198
MELO3C018566Melon (DHL92) v3.5.1memeB079
MELO3C018566Melon (DHL92) v3.5.1memeB094
MELO3C018566Cucurbita moschata (Rifu)cmomeB096
MELO3C018566Cucurbita maxima (Rimu)cmameB097
MELO3C018566Cucurbita maxima (Rimu)cmameB098
MELO3C018566Cucurbita maxima (Rimu)cmameB458
MELO3C018566Cucurbita maxima (Rimu)cmameB463
MELO3C018566Cucurbita maxima (Rimu)cmameB672
MELO3C018566Cucurbita moschata (Rifu)cmomeB085
MELO3C018566Cucurbita moschata (Rifu)cmomeB448
MELO3C018566Cucurbita moschata (Rifu)cmomeB454
MELO3C018566Cucurbita moschata (Rifu)cmomeB665
MELO3C018566Watermelon (Charleston Gray)mewcgB176
MELO3C018566Watermelon (Charleston Gray)mewcgB189
MELO3C018566Watermelon (Charleston Gray)mewcgB197
MELO3C018566Watermelon (97103) v1mewmB206
MELO3C018566Watermelon (97103) v1mewmB217
MELO3C018566Cucurbita pepo (Zucchini)cpemeB219
MELO3C018566Cucurbita pepo (Zucchini)cpemeB394
MELO3C018566Cucurbita pepo (Zucchini)cpemeB604
MELO3C018566Cucurbita pepo (Zucchini)cpemeB614
MELO3C018566Bottle gourd (USVL1VR-Ls)lsimeB247
MELO3C018566Bottle gourd (USVL1VR-Ls)lsimeB253
MELO3C018566Silver-seed gourdcarmeB0185
MELO3C018566Silver-seed gourdcarmeB0291
MELO3C018566Silver-seed gourdcarmeB0378
MELO3C018566Silver-seed gourdcarmeB0726
MELO3C018566Silver-seed gourdcarmeB0728