CsaV3_7G007310 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G007310
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionE3 ubiquitin-protein ligase
Locationchr7 : 4570267 .. 4571224 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAATCTTTTATTGGTTTCCTAATGGAATTCCGTTTTCTAAAACCTTAAGGAAATTGGAAAAGTCTCTCTTATATATATCTTTCATTCTATTCTCATATTTTCACATCTTCTCATCGCTATAACTCTCTCCACTTGGTCTTCGTCTTCATCTCAACCGCAATGGCCGAACATAACTTTGATGATTGTATGTCTACTGGTTGCTTCATGGGTATGTCACTAAGAATTACCGATCCCGACTTGAGCCTTCAACCACAAAGCCAAAATCAAACTCCACACAACTCCCCAACATTTGTCAAACAGATCAACCTGAAGTTAAAAGTTGAAGTCAAATGCCAACACTTTCAAGCAGATGAAGAAGGCGACACATTTGCATCAACTTTAATGATTGAACACATAGTTTCACACCATCCCTTTCCAACTTTCCAACTTCCTGTCTCCGTCTTCAGGCATGGTAACAGAACTTTGAAGCGATTACTTTTTCAGCAGTTTCAGATATTTAGAGGCATCATCAACATTCAACTTGTGGCTGACGAAATAATAGAACACTGGGTTAAAAAAGAAGAAGATAGAGAGAATAATTCTGGGGTACTGCTTGAAGAGATATATCCTCTCGAAATTACGATAGAGTTGCTGCTTCTTCGAATGATTCATGCAATAGACCAACCAGAAGAAACGATAGATCAACCACAAGTAACGATGGTTCCAGCAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAGAGTGGAAAAGGAGGAGATAGTGAAAGTGGGTGAGGACAAAAGCATTAATTGTGTTATCTGTTTGGAGGAAATTAGTAAAAAGATGAAAGGAAGTGAGGGAGTGGTGTTACAAATGCCATGCTTGCATATGTTTCATGAAGAATGTATAAGGACGTGGTTGAAGACAAGTCATTACTGCCCAACTTGTAGATTTTCAATGCCTATAAACAACAATTGA

mRNA sequence

ATGGCCGAACATAACTTTGATGATTGTATGTCTACTGGTTGCTTCATGGGTATGTCACTAAGAATTACCGATCCCGACTTGAGCCTTCAACCACAAAGCCAAAATCAAACTCCACACAACTCCCCAACATTTGTCAAACAGATCAACCTGAAGTTAAAAGTTGAAGTCAAATGCCAACACTTTCAAGCAGATGAAGAAGGCGACACATTTGCATCAACTTTAATGATTGAACACATAGTTTCACACCATCCCTTTCCAACTTTCCAACTTCCTGTCTCCGTCTTCAGGCATGGTAACAGAACTTTGAAGCGATTACTTTTTCAGCAGTTTCAGATATTTAGAGGCATCATCAACATTCAACTTGTGGCTGACGAAATAATAGAACACTGGGTTAAAAAAGAAGAAGATAGAGAGAATAATTCTGGGGTACTGCTTGAAGAGATATATCCTCTCGAAATTACGATAGAGTTGCTGCTTCTTCGAATGATTCATGCAATAGACCAACCAGAAGAAACGATAGATCAACCACAAGTAACGATGGTTCCAGCAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAGAGTGGAAAAGGAGGAGATAGTGAAAGTGGGTGAGGACAAAAGCATTAATTGTGTTATCTGTTTGGAGGAAATTAGTAAAAAGATGAAAGGAAGTGAGGGAGTGGTGTTACAAATGCCATGCTTGCATATGTTTCATGAAGAATGTATAAGGACGTGGTTGAAGACAAGTCATTACTGCCCAACTTGTAGATTTTCAATGCCTATAAACAACAATTGA

Coding sequence (CDS)

ATGGCCGAACATAACTTTGATGATTGTATGTCTACTGGTTGCTTCATGGGTATGTCACTAAGAATTACCGATCCCGACTTGAGCCTTCAACCACAAAGCCAAAATCAAACTCCACACAACTCCCCAACATTTGTCAAACAGATCAACCTGAAGTTAAAAGTTGAAGTCAAATGCCAACACTTTCAAGCAGATGAAGAAGGCGACACATTTGCATCAACTTTAATGATTGAACACATAGTTTCACACCATCCCTTTCCAACTTTCCAACTTCCTGTCTCCGTCTTCAGGCATGGTAACAGAACTTTGAAGCGATTACTTTTTCAGCAGTTTCAGATATTTAGAGGCATCATCAACATTCAACTTGTGGCTGACGAAATAATAGAACACTGGGTTAAAAAAGAAGAAGATAGAGAGAATAATTCTGGGGTACTGCTTGAAGAGATATATCCTCTCGAAATTACGATAGAGTTGCTGCTTCTTCGAATGATTCATGCAATAGACCAACCAGAAGAAACGATAGATCAACCACAAGTAACGATGGTTCCAGCAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAGAGTGGAAAAGGAGGAGATAGTGAAAGTGGGTGAGGACAAAAGCATTAATTGTGTTATCTGTTTGGAGGAAATTAGTAAAAAGATGAAAGGAAGTGAGGGAGTGGTGTTACAAATGCCATGCTTGCATATGTTTCATGAAGAATGTATAAGGACGTGGTTGAAGACAAGTCATTACTGCCCAACTTGTAGATTTTCAATGCCTATAAACAACAATTGA

Protein sequence

MAEHNFDDCMSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQHFQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQLVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEECIRTWLKTSHYCPTCRFSMPINNN
BLAST of CsaV3_7G007310 vs. NCBI nr
Match: XP_011659721.1 (PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus] >KGN43799.1 hypothetical protein Csa_7G067540 [Cucumis sativus])

HSP 1 Score: 540.0 bits (1390), Expect = 4.4e-150
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0

Query: 1   MAEHNFDDCMSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQH 60
           MAEHNFDDCMSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQH
Sbjct: 1   MAEHNFDDCMSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQH 60

Query: 61  FQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQ 120
           FQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQ
Sbjct: 61  FQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQ 120

Query: 121 LVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQVTM 180
           LVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQVTM
Sbjct: 121 LVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQVTM 180

Query: 181 VPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHE 240
           VPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHE
Sbjct: 181 VPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHE 240

Query: 241 ECIRTWLKTSHYCPTCRFSMPINNN 266
           ECIRTWLKTSHYCPTCRFSMPINNN
Sbjct: 241 ECIRTWLKTSHYCPTCRFSMPINNN 265

BLAST of CsaV3_7G007310 vs. NCBI nr
Match: KGN43800.1 (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 4.3e-105
Identity = 197/266 (74.06%), Postives = 226/266 (84.96%), Query Frame = 0

Query: 1   MAEHNFDDCMSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQH 60
           MAE NFDDC S G +MGMSLRITDP          QT  NSPT VKQI+L  KVEVKCQH
Sbjct: 1   MAEQNFDDCTS-GYYMGMSLRITDP---------IQTRSNSPTSVKQIDLNFKVEVKCQH 60

Query: 61  FQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQ 120
           FQA EE  TFA+T + EHI++H PFP  QLPVS+F+HG++TLKRLLFQ+FQ+FR IINI+
Sbjct: 61  FQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIE 120

Query: 121 LVADEIIEHWVKK-EEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQVT 180
           LV D+II+HWVKK E+D+ENNSGV  EEIYPLEITIE+L+L+MI A+DQP+ETIDQPQV 
Sbjct: 121 LVTDQIIKHWVKKVEDDKENNSGV-FEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVR 180

Query: 181 MVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFH 240
           MVP S+SAM+SMLKRVE EEI+KVG+ KSI+CVICLE+ISK+ KGSEGVVLQMPCLHMFH
Sbjct: 181 MVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFH 240

Query: 241 EECIRTWLKTSHYCPTCRFSMPINNN 266
           EECIR WLKTSHYCPTCRFSM INNN
Sbjct: 241 EECIRKWLKTSHYCPTCRFSMTINNN 255

BLAST of CsaV3_7G007310 vs. NCBI nr
Match: KGN43801.1 (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 382.5 bits (981), Expect = 1.2e-102
Identity = 196/268 (73.13%), Postives = 223/268 (83.21%), Query Frame = 0

Query: 1   MAEHNFDDC-MSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQ 60
           MAE  F  C   +G ++GMSLRITDPDL  QPQSQ +TP NSPT VKQI+L  KVEVKCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  H-FQADEEGD-TFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGII 120
           H FQA E G+ TFA+ L+ EHI SHHP PT QLPVS+F+HG++TLKRLLF++FQI+R II
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 NIQLVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEE-TIDQP 180
           NI+LV DEII+HWVKK  D EN++  + EEIYPLEITIELL+ +MIHAIDQP E  +DQP
Sbjct: 121 NIELVVDEIIKHWVKK-VDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180

Query: 181 QVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLH 240
           QV MVP SESAMESMLK+VE EEIVK G++KSINCVICLEEISK+ KGSE VVLQMPCLH
Sbjct: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240

Query: 241 MFHEECIRTWLKTSHYCPTCRFSMPINN 265
           MFHEECIR WLK SHYCPTCRFSMP NN
Sbjct: 241 MFHEECIRKWLKRSHYCPTCRFSMPTNN 267

BLAST of CsaV3_7G007310 vs. NCBI nr
Match: ADN34253.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo])

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 184/268 (68.66%), Postives = 216/268 (80.60%), Query Frame = 0

Query: 1   MAEHNFDDCMSTGCFMGMSLRITDPDL-SLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQ 60
           MAE N D CMS G +MGMSLRITDPDL   QPQSQ QT  NSP  VKQI+L  K++VKCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  HFQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINI 120
           HF A EEG TFA+TL+ EHI+S   FP  QLP+S+F+ G++TLKRLLFQ+FQ+FRGI+N+
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120

Query: 121 QLVADEIIEHWVKK-EEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQ- 180
           +LV DEII+HW++K EED+ENNS V   EIYPLEI IELL+ RMI AI      IDQPQ 
Sbjct: 121 ELVVDEIIKHWIRKVEEDQENNSRV-FAEIYPLEIRIELLVCRMIPAI------IDQPQE 180

Query: 181 VTMVPASESAMESMLKRVE-KEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLH 240
           V MVP S++AMESMLKRVE  EE++K+G+D SI+CVICLE+I K+ K S  VVLQMPCLH
Sbjct: 181 VMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMPCLH 240

Query: 241 MFHEECIRTWLKTSHYCPTCRFSMPINN 265
           MFHEECIR WLKTSH+CPTCRFSMPINN
Sbjct: 241 MFHEECIRKWLKTSHFCPTCRFSMPINN 260

BLAST of CsaV3_7G007310 vs. NCBI nr
Match: ADN34252.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo])

HSP 1 Score: 330.5 bits (846), Expect = 5.3e-87
Identity = 171/269 (63.57%), Postives = 215/269 (79.93%), Query Frame = 0

Query: 1   MAEHNFDDC-MSTGCFMGMSLRITDPDLSLQPQSQ-NQTPHNSPTFVKQINLKLKVEVKC 60
           MAE  F+ C   +G +MGMSLRITDP+   QP +Q +QT  +SPT V+QI LK KV++KC
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQT--SSPTLVEQICLKFKVQLKC 60

Query: 61  QHFQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIIN 120
           QHFQ  E G+  ++TL+ EHI S H F TFQLP+S+F+HG++TLKR+LF++F+++  IIN
Sbjct: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120

Query: 121 IQLVADEIIEHWVKK---EEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQ 180
           I+L+A+EII+HWV+K   EED+ENNS VL ++IYPLEI I LL+ +MI A+      IDQ
Sbjct: 121 IELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQ 180

Query: 181 PQVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCL 240
           P   MVP S+SA+ESMLKRVE EEI+K G+D+SINCV+CLEEISK+ KGSE  VLQMPCL
Sbjct: 181 P--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCL 240

Query: 241 HMFHEECIRTWLKTSHYCPTCRFSMPINN 265
           HMFHEECIR WLKTSHYCPTCRFSMPI+N
Sbjct: 241 HMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

BLAST of CsaV3_7G007310 vs. TAIR10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 62.4 bits (150), Expect = 4.9e-10
Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 0

Query: 182 PASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEE 241
           PAS+SA+ES L RVE  +   +G +   NC +C E    + +  E     MPC H+FH++
Sbjct: 174 PASKSAIES-LPRVEISD-CHIGSE--ANCAVCTEIFETETEARE-----MPCKHLFHDD 233

Query: 242 CIRTWLKTSHYCPTCRFSMPINNN 266
           CI  WL   + CP CRF +P   N
Sbjct: 234 CIVPWLSIRNSCPVCRFELPSEPN 248

BLAST of CsaV3_7G007310 vs. TAIR10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 61.6 bits (148), Expect = 8.3e-10
Identity = 34/80 (42.50%), Postives = 44/80 (55.00%), Query Frame = 0

Query: 182 PASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEE 241
           PAS+SA+ES L RVE  +     E    NC +C E     ++G E     MPC H+FH +
Sbjct: 190 PASKSAIES-LPRVEISDCHTKAE---ANCAVCTEVFEAGIEGRE-----MPCKHIFHGD 249

Query: 242 CIRTWLKTSHYCPTCRFSMP 262
           CI  WL   + CP CRF +P
Sbjct: 250 CIVPWLSIRNSCPVCRFELP 260

BLAST of CsaV3_7G007310 vs. TAIR10
Match: AT3G58720.2 (RING/U-box superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 27/55 (49.09%), Postives = 31/55 (56.36%), Query Frame = 0

Query: 204 GEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEECIRTWLKTSHYCPTCRF 259
           GE+    C +CLE+   K       V+  PC HMFHEECI  WLKT   CP CRF
Sbjct: 165 GEEDDKRCSVCLEDFEPK-----ETVMLTPCKHMFHEECIVPWLKTKGQCPVCRF 214

BLAST of CsaV3_7G007310 vs. TAIR10
Match: AT3G13228.1 (RING/U-box superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-09
Identity = 28/80 (35.00%), Postives = 49/80 (61.25%), Query Frame = 0

Query: 182 PASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEE 241
           PAS+  ++S+ +++  ++I   GE     C ICLEE +     + G+++ +PC H F +E
Sbjct: 251 PASKLVVKSLTRKI-YDKINYTGE----RCTICLEEFN-----AGGILVALPCGHDFDDE 310

Query: 242 CIRTWLKTSHYCPTCRFSMP 262
           C   W +T+H+CP CR+ +P
Sbjct: 311 CAVKWFETNHFCPLCRYELP 320

BLAST of CsaV3_7G007310 vs. TAIR10
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 4.1e-09
Identity = 28/83 (33.73%), Postives = 51/83 (61.45%), Query Frame = 0

Query: 182 PASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEE 241
           PAS+SA++++      ++++K    +   C +C++E      GS+  V QMPC H+FH++
Sbjct: 190 PASKSAIDALPTVKVTKDMLK---SEMNQCAVCMDEFE---DGSD--VKQMPCKHVFHQD 249

Query: 242 CIRTWLKTSHYCPTCRFSMPINN 265
           C+  WL+  + CP CRF +P ++
Sbjct: 250 CLLPWLELHNSCPVCRFELPTDD 264

BLAST of CsaV3_7G007310 vs. Swiss-Prot
Match: sp|Q940T5|RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.8e-09
Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 0

Query: 182 PASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEE 241
           PAS+SA+ES L RVE  +   +G +   NC +C E    + +  E     MPC H+FH++
Sbjct: 174 PASKSAIES-LPRVEISD-CHIGSE--ANCAVCTEIFETETEARE-----MPCKHLFHDD 233

Query: 242 CIRTWLKTSHYCPTCRFSMPINNN 266
           CI  WL   + CP CRF +P   N
Sbjct: 234 CIVPWLSIRNSCPVCRFELPSEPN 248

BLAST of CsaV3_7G007310 vs. Swiss-Prot
Match: sp|Q9SNB6|RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-08
Identity = 34/80 (42.50%), Postives = 44/80 (55.00%), Query Frame = 0

Query: 182 PASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEE 241
           PAS+SA+ES L RVE  +     E    NC +C E     ++G E     MPC H+FH +
Sbjct: 190 PASKSAIES-LPRVEISDCHTKAE---ANCAVCTEVFEAGIEGRE-----MPCKHIFHGD 249

Query: 242 CIRTWLKTSHYCPTCRFSMP 262
           CI  WL   + CP CRF +P
Sbjct: 250 CIVPWLSIRNSCPVCRFELP 260

BLAST of CsaV3_7G007310 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.5e-08
Identity = 28/83 (33.73%), Postives = 51/83 (61.45%), Query Frame = 0

Query: 182 PASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEE 241
           PAS+SA++++      ++++K    +   C +C++E      GS+  V QMPC H+FH++
Sbjct: 190 PASKSAIDALPTVKVTKDMLK---SEMNQCAVCMDEFE---DGSD--VKQMPCKHVFHQD 249

Query: 242 CIRTWLKTSHYCPTCRFSMPINN 265
           C+  WL+  + CP CRF +P ++
Sbjct: 250 CLLPWLELHNSCPVCRFELPTDD 264

BLAST of CsaV3_7G007310 vs. Swiss-Prot
Match: sp|Q3T0W3|RN181_BOVIN (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 26/84 (30.95%), Postives = 46/84 (54.76%), Query Frame = 0

Query: 182 PASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEE 241
           PA+++A+E++ + V +      G    + C +CL E  +     E   ++MPC H+FH  
Sbjct: 53  PAAKTAVENLPRTVIR------GSQAELKCPVCLLEFEE-----EETAIEMPCHHLFHSN 112

Query: 242 CIRTWLKTSHYCPTCRFSMPINNN 266
           CI  WL  ++ CP CR  +P +++
Sbjct: 113 CILPWLSKTNSCPLCRHELPTDDD 125

BLAST of CsaV3_7G007310 vs. Swiss-Prot
Match: sp|Q9P0P0|RN181_HUMAN (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 25/84 (29.76%), Postives = 46/84 (54.76%), Query Frame = 0

Query: 182 PASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHEE 241
           PA+++ +E++ + V +      G    + C +CL E  +     E   ++MPC H+FH  
Sbjct: 53  PAAKTVVENLPRTVIR------GSQAELKCPVCLLEFEE-----EETAIEMPCHHLFHSS 112

Query: 242 CIRTWLKTSHYCPTCRFSMPINNN 266
           CI  WL  ++ CP CR+ +P +++
Sbjct: 113 CILPWLSKTNSCPLCRYELPTDDD 125

BLAST of CsaV3_7G007310 vs. TrEMBL
Match: tr|A0A0A0K493|A0A0A0K493_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067540 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 2.9e-150
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0

Query: 1   MAEHNFDDCMSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQH 60
           MAEHNFDDCMSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQH
Sbjct: 1   MAEHNFDDCMSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQH 60

Query: 61  FQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQ 120
           FQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQ
Sbjct: 61  FQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQ 120

Query: 121 LVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQVTM 180
           LVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQVTM
Sbjct: 121 LVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQVTM 180

Query: 181 VPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHE 240
           VPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHE
Sbjct: 181 VPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFHE 240

Query: 241 ECIRTWLKTSHYCPTCRFSMPINNN 266
           ECIRTWLKTSHYCPTCRFSMPINNN
Sbjct: 241 ECIRTWLKTSHYCPTCRFSMPINNN 265

BLAST of CsaV3_7G007310 vs. TrEMBL
Match: tr|A0A0A0K2A1|A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 2.9e-105
Identity = 197/266 (74.06%), Postives = 226/266 (84.96%), Query Frame = 0

Query: 1   MAEHNFDDCMSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQH 60
           MAE NFDDC S G +MGMSLRITDP          QT  NSPT VKQI+L  KVEVKCQH
Sbjct: 1   MAEQNFDDCTS-GYYMGMSLRITDP---------IQTRSNSPTSVKQIDLNFKVEVKCQH 60

Query: 61  FQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINIQ 120
           FQA EE  TFA+T + EHI++H PFP  QLPVS+F+HG++TLKRLLFQ+FQ+FR IINI+
Sbjct: 61  FQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINIE 120

Query: 121 LVADEIIEHWVKK-EEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQVT 180
           LV D+II+HWVKK E+D+ENNSGV  EEIYPLEITIE+L+L+MI A+DQP+ETIDQPQV 
Sbjct: 121 LVTDQIIKHWVKKVEDDKENNSGV-FEEIYPLEITIEVLVLQMIDAVDQPQETIDQPQVR 180

Query: 181 MVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLHMFH 240
           MVP S+SAM+SMLKRVE EEI+KVG+ KSI+CVICLE+ISK+ KGSEGVVLQMPCLHMFH
Sbjct: 181 MVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLHMFH 240

Query: 241 EECIRTWLKTSHYCPTCRFSMPINNN 266
           EECIR WLKTSHYCPTCRFSM INNN
Sbjct: 241 EECIRKWLKTSHYCPTCRFSMTINNN 255

BLAST of CsaV3_7G007310 vs. TrEMBL
Match: tr|A0A0A0K7L0|A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 7.8e-103
Identity = 196/268 (73.13%), Postives = 223/268 (83.21%), Query Frame = 0

Query: 1   MAEHNFDDC-MSTGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQ 60
           MAE  F  C   +G ++GMSLRITDPDL  QPQSQ +TP NSPT VKQI+L  KVEVKCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  H-FQADEEGD-TFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGII 120
           H FQA E G+ TFA+ L+ EHI SHHP PT QLPVS+F+HG++TLKRLLF++FQI+R II
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 NIQLVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEE-TIDQP 180
           NI+LV DEII+HWVKK  D EN++  + EEIYPLEITIELL+ +MIHAIDQP E  +DQP
Sbjct: 121 NIELVVDEIIKHWVKK-VDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180

Query: 181 QVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLH 240
           QV MVP SESAMESMLK+VE EEIVK G++KSINCVICLEEISK+ KGSE VVLQMPCLH
Sbjct: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240

Query: 241 MFHEECIRTWLKTSHYCPTCRFSMPINN 265
           MFHEECIR WLK SHYCPTCRFSMP NN
Sbjct: 241 MFHEECIRKWLKRSHYCPTCRFSMPTNN 267

BLAST of CsaV3_7G007310 vs. TrEMBL
Match: tr|E5GCQ4|E5GCQ4_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 7.3e-93
Identity = 184/268 (68.66%), Postives = 216/268 (80.60%), Query Frame = 0

Query: 1   MAEHNFDDCMSTGCFMGMSLRITDPDL-SLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQ 60
           MAE N D CMS G +MGMSLRITDPDL   QPQSQ QT  NSP  VKQI+L  K++VKCQ
Sbjct: 1   MAEQNLDACMSAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKCQ 60

Query: 61  HFQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIINI 120
           HF A EEG TFA+TL+ EHI+S   FP  QLP+S+F+ G++TLKRLLFQ+FQ+FRGI+N+
Sbjct: 61  HFGAGEEGSTFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGIVNV 120

Query: 121 QLVADEIIEHWVKK-EEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQPQ- 180
           +LV DEII+HW++K EED+ENNS V   EIYPLEI IELL+ RMI AI      IDQPQ 
Sbjct: 121 ELVVDEIIKHWIRKVEEDQENNSRV-FAEIYPLEIRIELLVCRMIPAI------IDQPQE 180

Query: 181 VTMVPASESAMESMLKRVE-KEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLH 240
           V MVP S++AMESMLKRVE  EE++K+G+D SI+CVICLE+I K+ K S  VVLQMPCLH
Sbjct: 181 VMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMPCLH 240

Query: 241 MFHEECIRTWLKTSHYCPTCRFSMPINN 265
           MFHEECIR WLKTSH+CPTCRFSMPINN
Sbjct: 241 MFHEECIRKWLKTSHFCPTCRFSMPINN 260

BLAST of CsaV3_7G007310 vs. TrEMBL
Match: tr|E5GCQ3|E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 3.5e-87
Identity = 171/269 (63.57%), Postives = 215/269 (79.93%), Query Frame = 0

Query: 1   MAEHNFDDC-MSTGCFMGMSLRITDPDLSLQPQSQ-NQTPHNSPTFVKQINLKLKVEVKC 60
           MAE  F+ C   +G +MGMSLRITDP+   QP +Q +QT  +SPT V+QI LK KV++KC
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQT--SSPTLVEQICLKFKVQLKC 60

Query: 61  QHFQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGIIN 120
           QHFQ  E G+  ++TL+ EHI S H F TFQLP+S+F+HG++TLKR+LF++F+++  IIN
Sbjct: 61  QHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDIIN 120

Query: 121 IQLVADEIIEHWVKK---EEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETIDQ 180
           I+L+A+EII+HWV+K   EED+ENNS VL ++IYPLEI I LL+ +MI A+      IDQ
Sbjct: 121 IELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAVQPRLAMIDQ 180

Query: 181 PQVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCL 240
           P   MVP S+SA+ESMLKRVE EEI+K G+D+SINCV+CLEEISK+ KGSE  VLQMPCL
Sbjct: 181 P--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMPCL 240

Query: 241 HMFHEECIRTWLKTSHYCPTCRFSMPINN 265
           HMFHEECIR WLKTSHYCPTCRFSMPI+N
Sbjct: 241 HMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011659721.14.4e-150100.00PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus] >KGN43799.1 ... [more]
KGN43800.14.3e-10574.06hypothetical protein Csa_7G067550 [Cucumis sativus][more]
KGN43801.11.2e-10273.13hypothetical protein Csa_7G067560 [Cucumis sativus][more]
ADN34253.11.1e-9268.66hypothetical zinc finger protein [Cucumis melo subsp. melo][more]
ADN34252.15.3e-8763.57hypothetical zinc finger protein [Cucumis melo subsp. melo][more]
Match NameE-valueIdentityDescription
AT5G59550.14.9e-1040.48zinc finger (C3HC4-type RING finger) family protein[more]
AT3G46620.18.3e-1042.50zinc finger (C3HC4-type RING finger) family protein[more]
AT3G58720.21.4e-0949.09RING/U-box superfamily protein[more]
AT3G13228.11.9e-0935.00RING/U-box superfamily protein[more]
AT3G19950.14.1e-0933.73RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q940T5|RDUF2_ARATH8.8e-0940.48E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ... [more]
sp|Q9SNB6|RDUF1_ARATH1.5e-0842.50E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ... [more]
sp|Q8LPN7|RNG1L_ARATH7.5e-0833.73E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
sp|Q3T0W3|RN181_BOVIN1.7e-0730.95E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1[more]
sp|Q9P0P0|RN181_HUMAN1.7e-0729.76E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0K493|A0A0A0K493_CUCSA2.9e-150100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067540 PE=4 SV=1[more]
tr|A0A0A0K2A1|A0A0A0K2A1_CUCSA2.9e-10574.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1[more]
tr|A0A0A0K7L0|A0A0A0K7L0_CUCSA7.8e-10373.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1[more]
tr|E5GCQ4|E5GCQ4_CUCME7.3e-9368.66Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|E5GCQ3|E5GCQ3_CUCME3.5e-8763.57Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR011016Znf_RING-CH
IPR001841Znf_RING
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G007310.1CsaV3_7G007310.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 211..256
e-value: 5.7E-8
score: 42.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 210..257
e-value: 5.0E-12
score: 45.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 211..257
score: 12.902
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 210..257
e-value: 7.9E-4
score: 16.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 170..263
e-value: 1.0E-17
score: 65.6
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 161..262
NoneNo IPR availablePANTHERPTHR15710:SF4F28K19.4-RELATEDcoord: 161..262
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 198..262

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G007310Cucurbita maxima (Rimu)cmacucB0918
CsaV3_7G007310Cucurbita maxima (Rimu)cmacucB0959
CsaV3_7G007310Cucurbita moschata (Rifu)cmocucB0158
CsaV3_7G007310Cucurbita moschata (Rifu)cmocucB0160
CsaV3_7G007310Cucurbita moschata (Rifu)cmocucB0623
CsaV3_7G007310Cucurbita moschata (Rifu)cmocucB0629
CsaV3_7G007310Cucurbita moschata (Rifu)cmocucB0910
CsaV3_7G007310Cucurbita moschata (Rifu)cmocucB0949
CsaV3_7G007310Cucurbita pepo (Zucchini)cpecucB0141
CsaV3_7G007310Cucurbita pepo (Zucchini)cpecucB0329
CsaV3_7G007310Cucurbita pepo (Zucchini)cpecucB0582
CsaV3_7G007310Cucurbita pepo (Zucchini)cpecucB0867
CsaV3_7G007310Cucurbita pepo (Zucchini)cpecucB0868
CsaV3_7G007310Wild cucumber (PI 183967)cpicucB252
CsaV3_7G007310Bottle gourd (USVL1VR-Ls)cuclsiB554
CsaV3_7G007310Bottle gourd (USVL1VR-Ls)cuclsiB555
CsaV3_7G007310Melon (DHL92) v3.5.1cucmeB569
CsaV3_7G007310Melon (DHL92) v3.5.1cucmeB585
CsaV3_7G007310Melon (DHL92) v3.6.1cucmedB572
CsaV3_7G007310Watermelon (Charleston Gray)cucwcgB535
CsaV3_7G007310Watermelon (Charleston Gray)cucwcgB556
CsaV3_7G007310Watermelon (Charleston Gray)cucwcgB572
CsaV3_7G007310Watermelon (Charleston Gray)cucwcgB601
CsaV3_7G007310Watermelon (97103) v1cucwmB580
CsaV3_7G007310Watermelon (97103) v1cucwmB602
CsaV3_7G007310Watermelon (97103) v1cucwmB607
CsaV3_7G007310Watermelon (97103) v2cucwmbB537
CsaV3_7G007310Watermelon (97103) v2cucwmbB550
CsaV3_7G007310Watermelon (97103) v2cucwmbB581
CsaV3_7G007310Wax gourdcucwgoB674
CsaV3_7G007310Wax gourdcucwgoB686
CsaV3_7G007310Silver-seed gourdcarcucB0322
CsaV3_7G007310Silver-seed gourdcarcucB0413
CsaV3_7G007310Silver-seed gourdcarcucB0769
CsaV3_7G007310Silver-seed gourdcarcucB0770
CsaV3_7G007310Cucurbita maxima (Rimu)cmacucB0171
CsaV3_7G007310Cucurbita maxima (Rimu)cmacucB0181
CsaV3_7G007310Cucurbita maxima (Rimu)cmacucB0232
CsaV3_7G007310Cucurbita maxima (Rimu)cmacucB0639
CsaV3_7G007310Cucurbita maxima (Rimu)cmacucB0645