MELO3C016513.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C016513.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionMetallothionein
Locationchr06 : 28307209 .. 28308522 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACATAAAAGAAAGATAGAAAGCCATACCTACTTGATTCGGATTCTTTTGGACAGCTTGAAAGAGGCGTGTGGTTCTCTCCCATGCTTATCGTCATCTCCCATTGCTAATGGCAGAGATCCTGCAGTATAAATACACAACCAAACTTCAAGACTTGGAGATCATAAGCAGAAAAAAAAAGAGACCATTAACAAGCTATTTGTTTTCCCTTCTCTTGCAACTTTTTAGCTTCTTCACCATGTCGTCATGTGGCAACTGCGACTGTTCCGACAAGACCCAATGCGTGTAAGTAGTTTTTACCTACAAATTTATCAGCAAATCTAACTAACAGCTTACCTGTCACAAGACAATGATTCTGGTATGGTTACTAAAGTTGTCTTAATATTGCAAGTTCGTTAATATTGTCCTTGGTTGCCCTTTCGGGTTCAAGCTATATCAAACATGGCCATGAAGATTTGATTAAGAGATTAGTGTTTTTTTTTTTTTTAAGCAACGCTTATGTTGGCTGAATGAGACGTTTCTCTTAATACCATGAAAGTATCTATTTTGATTGTGTTGTGGTGAAGAAGATCAATGGTTTTCCTCAAAATCAACCAAAACCTGTAGAACTTACTATTGGTTTTATATTTTGTCGATTGAAGGAAAAATTTGCATAATTAAGTTCTTATAAGAAGGACTGACATGGTCTATAACAACAGGAAAAAAGGGAACAGCTATGGCGCTGTCATCATGGAGAATGAGAACAGGTAATTGTTTCAGCTGATTTTGAGCCCCTTTTCCCCTGATGAGATCTTAAAATTTCAAGGTATGGATATGAGAAAGAATTAAGTAAATCATAATCAAAAGCATGAGTGAATTGAGAAGGGAAAAAAAAGTGAAAACAGCAAAGACAGAACGTCCCAACAAATTATTTACAAAAAGAGTTTTACGAAGCACCTGCCATCTAATGATATATATATTGGTTCTGCAGCTCATTTGATGCCATAGTTATGAACTTCCCAGCGGCCGAGCACAACGACAAGTGCAGCTGCAACCCCTGCAGCTGTCCAAACTGTGGCTGCAACAATTGAACACATACATCTGTTATTTCAACTAGCACAGCTATGTGAAAGCCAGCAATAATGTAGCTGTGTTTGAAAAAAAAAAATAGTGTCTGTTTTATGTTCAAAAACCTCTGTTCTTAGCTAGAGGTGTGTTATGAATAATGTCTATTTCTGTTTTTCATTCACAGTCATGTAATGTTGGTCACTTGTGTCCATGGAGTTAATGGATAAGTTATACTAGTACACTCTCTATTCCTCTCCATCCATTTTCA

mRNA sequence

GACATAAAAGAAAGATAGAAAGCCATACCTACTTGATTCGGATTCTTTTGGACAGCTTGAAAGAGGCGTGTGGTTCTCTCCCATGCTTATCGTCATCTCCCATTGCTAATGGCAGAGATCCTGCAGTATAAATACACAACCAAACTTCAAGACTTGGAGATCATAAGCAGAAAAAAAAAGAGACCATTAACAAGCTATTTGTTTTCCCTTCTCTTGCAACTTTTTAGCTTCTTCACCATGTCGTCATGTGGCAACTGCGACTGTTCCGACAAGACCCAATGCGTGACTGACATGGTCTATAACAACAGGAAAAAAGGGAACAGCTATGGCGCTGTCATCATGGAGAATGAGAACAGCTCATTTGATGCCATAGTTATGAACTTCCCAGCGGCCGAGCACAACGACAAGTGCAGCTGCAACCCCTGCAGCTGTCCAAACTGTGGCTGCAACAATTGAACACATACATCTGTTATTTCAACTAGCACAGCTATGTGAAAGCCAGCAATAATGTAGCTGTGTTTGAAAAAAAAAAATAGTGTCTGTTTTATGTTCAAAAACCTCTGTTCTTAGCTAGAGGTGTGTTATGAATAATGTCTATTTCTGTTTTTCATTCACAGTCATGTAATGTTGGTCACTTGTGTCCATGGAGTTAATGGATAAGTTATACTAGTACACTCTCTATTCCTCTCCATCCATTTTCA

Coding sequence (CDS)

ATGGCAGAGATCCTGCAGTATAAATACACAACCAAACTTCAAGACTTGGAGATCATAAGCAGAAAAAAAAAGAGACCATTAACAAGCTATTTGTTTTCCCTTCTCTTGCAACTTTTTAGCTTCTTCACCATGTCGTCATGTGGCAACTGCGACTGTTCCGACAAGACCCAATGCGTGACTGACATGGTCTATAACAACAGGAAAAAAGGGAACAGCTATGGCGCTGTCATCATGGAGAATGAGAACAGCTCATTTGATGCCATAGTTATGAACTTCCCAGCGGCCGAGCACAACGACAAGTGCAGCTGCAACCCCTGCAGCTGTCCAAACTGTGGCTGCAACAATTGA

Protein sequence

MAEILQYKYTTKLQDLEIISRKKKRPLTSYLFSLLLQLFSFFTMSSCGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSCNPCSCPNCGCNN
BLAST of MELO3C016513.2 vs. NCBI nr
Match: ADN33916.1 (metallothionein-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 109.4 bits (272), Expect = 8.3e-21
Identity = 53/61 (86.89%), Postives = 53/61 (86.89%), Query Frame = 0

Query: 44  MSSCGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 103
           MSSCGNCDCSDKTQCV        KKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC
Sbjct: 1   MSSCGNCDCSDKTQCV--------KKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 53

Query: 104 N 105
           N
Sbjct: 61  N 53

BLAST of MELO3C016513.2 vs. NCBI nr
Match: ACZ69388.1 (metallothionein-like protein type 3 [Cucumis sativus] >KGN56243.1 hypothetical protein Csa_3G105950 [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 3.9e-18
Identity = 48/61 (78.69%), Postives = 52/61 (85.25%), Query Frame = 0

Query: 44  MSSCGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 103
           MS+CGNCDCSDKTQCV        K+G+SYGAVI ENENSSFDAIVM+FPAAEHNDKCSC
Sbjct: 1   MSTCGNCDCSDKTQCV--------KQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSC 53

Query: 104 N 105
           N
Sbjct: 61  N 53

BLAST of MELO3C016513.2 vs. NCBI nr
Match: OAY82152.1 (Metallothionein-like protein type 3 [Ananas comosus])

HSP 1 Score: 72.8 bits (177), Expect = 8.6e-10
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 0

Query: 45  SSCGNCDCSDKTQCVTDM--VYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCS 104
           S+CGNCDC+DK+QCV+ +  +Y  RKKGNSYG  I+E E S FD+IV    AAE++ KC 
Sbjct: 3   STCGNCDCADKSQCVSKLGTIYICRKKGNSYGMEIVETEKSYFDSIVEAPAAAEYDGKCK 62

BLAST of MELO3C016513.2 vs. NCBI nr
Match: PON68011.1 (Metallothionein-like protein type [Parasponia andersonii])

HSP 1 Score: 71.2 bits (173), Expect = 2.5e-09
Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 0

Query: 47  CGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 104
           CG+CDC+DK+QCV        KKG+SY  VI+E E S  DA+VM+ PAAEHN KC C
Sbjct: 5   CGSCDCADKSQCV--------KKGSSYSLVIVETEKSYMDAVVMDAPAAEHNGKCKC 53

BLAST of MELO3C016513.2 vs. NCBI nr
Match: RDX57746.1 (hypothetical protein CR513_62988 [Mucuna pruriens])

HSP 1 Score: 71.2 bits (173), Expect = 2.5e-09
Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 0

Query: 45  SSCGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 104
           ++CGNCDC DK+QC          KGNSYGAVI+E E S  + +VM+ PAAEH+ KC C
Sbjct: 3   NTCGNCDCGDKSQCT---------KGNSYGAVIVETEKSYIETVVMDVPAAEHDGKCKC 52

BLAST of MELO3C016513.2 vs. TAIR10
Match: AT3G15353.1 (metallothionein 3)

HSP 1 Score: 47.8 bits (112), Expect = 5.4e-06
Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 0

Query: 45 SSCGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEH 98
          S+CG+CDC+DKTQCV        KKG SY   I+E + S  +A++M+  A E+
Sbjct: 3  SNCGSCDCADKTQCV--------KKGTSYTFDIVETQESYKEAMIMDVGAEEN 47

BLAST of MELO3C016513.2 vs. Swiss-Prot
Match: sp|O24059|MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica OX=3750 GN=MT2 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 31/57 (54.39%), Postives = 37/57 (64.91%), Query Frame = 0

Query: 47  CGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 104
           C NCDC+D TQCV        KKGNSY  VI+E EN S D + ++ PAAEH+ KC C
Sbjct: 5   CDNCDCADSTQCV--------KKGNSYDLVIVETENRSMDTVFVDAPAAEHDGKCKC 53

BLAST of MELO3C016513.2 vs. Swiss-Prot
Match: sp|Q40256|MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata OX=4641 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-10
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 0

Query: 44  MSSCGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 103
           MS+CGNCDC DK+QCV        KKGNSYG  I+E E S  D +++   AAEH+ KC C
Sbjct: 1   MSTCGNCDCVDKSQCV--------KKGNSYGIDIVETEKSYVDEVIVAAEAAEHDGKCKC 52

BLAST of MELO3C016513.2 vs. Swiss-Prot
Match: sp|O48951|MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium OX=42229 GN=MT1 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 28/59 (47.46%), Postives = 35/59 (59.32%), Query Frame = 0

Query: 45  SSCGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 104
           S C NCDCSD +QC         KKG S+  VI+E EN S D ++M+ PAAE+   C C
Sbjct: 3   SKCSNCDCSDSSQCT--------KKGYSFDLVIVETENRSMDTVIMDAPAAENGGNCKC 53

BLAST of MELO3C016513.2 vs. Swiss-Prot
Match: sp|Q96386|MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya OX=3649 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-08
Identity = 31/58 (53.45%), Postives = 39/58 (67.24%), Query Frame = 0

Query: 46  SCGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 104
           +CGNCDC+DKTQCV        KKG+SY A I+E E S    +VM+ PAAE++ KC C
Sbjct: 4   TCGNCDCADKTQCV--------KKGSSYTADIIETEKSIM-TVVMDAPAAENDGKCKC 52

BLAST of MELO3C016513.2 vs. Swiss-Prot
Match: sp|A2WLS0|MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica OX=39946 GN=MT3A PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.1e-07
Identity = 28/57 (49.12%), Postives = 33/57 (57.89%), Query Frame = 0

Query: 47  CGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 104
           CGNCDC+DK+QCV        KKG SYG VI+E E S F+ +     A E N  C C
Sbjct: 5   CGNCDCADKSQCV--------KKGTSYGVVIVEAEKSHFEEVA----AGEENGGCKC 49

BLAST of MELO3C016513.2 vs. TrEMBL
Match: tr|E5GBS4|E5GBS4_CUCME (Metallothionein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.5e-21
Identity = 53/61 (86.89%), Postives = 53/61 (86.89%), Query Frame = 0

Query: 44  MSSCGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 103
           MSSCGNCDCSDKTQCV        KKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC
Sbjct: 1   MSSCGNCDCSDKTQCV--------KKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 53

Query: 104 N 105
           N
Sbjct: 61  N 53

BLAST of MELO3C016513.2 vs. TrEMBL
Match: tr|D2J0B0|D2J0B0_CUCSA (Metallothionein-like protein type 3 OS=Cucumis sativus OX=3659 GN=MTP-3 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.6e-18
Identity = 48/61 (78.69%), Postives = 52/61 (85.25%), Query Frame = 0

Query: 44  MSSCGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 103
           MS+CGNCDCSDKTQCV        K+G+SYGAVI ENENSSFDAIVM+FPAAEHNDKCSC
Sbjct: 1   MSTCGNCDCSDKTQCV--------KQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSC 53

Query: 104 N 105
           N
Sbjct: 61  N 53

BLAST of MELO3C016513.2 vs. TrEMBL
Match: tr|A0A199VY29|A0A199VY29_ANACO (Metallothionein-like protein type 3 OS=Ananas comosus OX=4615 GN=ACMD2_03703 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.7e-10
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 0

Query: 45  SSCGNCDCSDKTQCVTDM--VYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCS 104
           S+CGNCDC+DK+QCV+ +  +Y  RKKGNSYG  I+E E S FD+IV    AAE++ KC 
Sbjct: 3   STCGNCDCADKSQCVSKLGTIYICRKKGNSYGMEIVETEKSYFDSIVEAPAAAEYDGKCK 62

BLAST of MELO3C016513.2 vs. TrEMBL
Match: tr|A0A2P5D400|A0A2P5D400_PARAD (Metallothionein-like protein type OS=Parasponia andersonii OX=3476 GN=PanWU01x14_098150 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-09
Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 0

Query: 47  CGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 104
           CG+CDC+DK+QCV        KKG+SY  VI+E E S  DA+VM+ PAAEHN KC C
Sbjct: 5   CGSCDCADKSQCV--------KKGSSYSLVIVETEKSYMDAVVMDAPAAEHNGKCKC 53

BLAST of MELO3C016513.2 vs. TrEMBL
Match: tr|B9T0E5|B9T0E5_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0507790 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.8e-09
Identity = 33/59 (55.93%), Postives = 40/59 (67.80%), Query Frame = 0

Query: 45  SSCGNCDCSDKTQCVTDMVYNNRKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSC 104
           S+CGNCDC+DK+QCV        KKG+SY A ++E E SS   IVM  PAAEH+ KC C
Sbjct: 3   STCGNCDCADKSQCV--------KKGSSYTADVVETEKSSVSTIVMEVPAAEHDGKCKC 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ADN33916.18.3e-2186.89metallothionein-like protein [Cucumis melo subsp. melo][more]
ACZ69388.13.9e-1878.69metallothionein-like protein type 3 [Cucumis sativus] >KGN56243.1 hypothetical p... [more]
OAY82152.18.6e-1057.38Metallothionein-like protein type 3 [Ananas comosus][more]
PON68011.12.5e-0957.89Metallothionein-like protein type [Parasponia andersonii][more]
RDX57746.12.5e-0954.24hypothetical protein CR513_62988 [Mucuna pruriens][more]
Match NameE-valueIdentityDescription
AT3G15353.15.4e-0645.28metallothionein 3[more]
Match NameE-valueIdentityDescription
sp|O24059|MT3_MALDO1.2e-1054.39Metallothionein-like protein type 3 OS=Malus domestica OX=3750 GN=MT2 PE=3 SV=1[more]
sp|Q40256|MT3_MUSAC2.0e-1053.33Metallothionein-like protein type 3 OS=Musa acuminata OX=4641 PE=3 SV=1[more]
sp|O48951|MT3_PRUAV1.1e-0847.46Metallothionein-like protein 1 OS=Prunus avium OX=42229 GN=MT1 PE=3 SV=1[more]
sp|Q96386|MT3_CARPA1.5e-0853.45Metallothionein-like protein type 3 OS=Carica papaya OX=3649 PE=3 SV=1[more]
sp|A2WLS0|MT3A_ORYSI6.1e-0749.12Metallothionein-like protein 3A OS=Oryza sativa subsp. indica OX=39946 GN=MT3A P... [more]
Match NameE-valueIdentityDescription
tr|E5GBS4|E5GBS4_CUCME5.5e-2186.89Metallothionein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|D2J0B0|D2J0B0_CUCSA2.6e-1878.69Metallothionein-like protein type 3 OS=Cucumis sativus OX=3659 GN=MTP-3 PE=2 SV=... [more]
tr|A0A199VY29|A0A199VY29_ANACO5.7e-1057.38Metallothionein-like protein type 3 OS=Ananas comosus OX=4615 GN=ACMD2_03703 PE=... [more]
tr|A0A2P5D400|A0A2P5D400_PARAD1.7e-0957.89Metallothionein-like protein type OS=Parasponia andersonii OX=3476 GN=PanWU01x14... [more]
tr|B9T0E5|B9T0E5_RICCO4.8e-0955.93Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0507790 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0007275 multicellular organism development
biological_process GO:0006970 response to osmotic stress
biological_process GO:0042221 response to chemical
biological_process GO:0050789 regulation of biological process
biological_process GO:0016043 cellular component organization
biological_process GO:0044765 single-organism transport
biological_process GO:0044763 single-organism cellular process
biological_process GO:0006950 response to stress
biological_process GO:0065008 regulation of biological quality
biological_process GO:0006878 cellular copper ion homeostasis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005623 cell
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016513.2.1MELO3C016513.2.1mRNA