CsGy3G006280 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAATGCTAACCAAAGTTTGAATCTTGAAATCAACTATATGTCACAAACAACAAACTGAAATTTAACTCCTTAAGCAAGAGGGTAACTTCAACAACCATTTTTATTCTGTTTCATATAAAACTTCATATGAACATCAATCTTCAGAAATGGTCTGTTTAATCAAAAGAAAAATGAAGTTGACATAAAAGAAGGATAGAAAGCCATACCTACATGATTCGGATTCTTTTGGACAGTTCGAAAGAGGCGTGTGGTTCTCTCCCATGCTTATCATCTCCCATTGCCAATGGCAGCGATCCTGCAGTATAAATACACAACCAAACTTCATGACTTGGAGATCATAAGCAGAAAAAAAAGAGACCATTAACAAGCTATCTGTTTCCCTTCTCTTGCAACTTTTTAGCTTCTTCACCATGTCGACATGTGGCAACTGCGACTGTTCCGACAAGACCCAATGCGTGTAAGTAGTTTTTACCTACAAATTTATCAGCAAATCTAACTAAGAGTTTACTTGTCACAAGACTGATTCTGGTATGGCTACCAAAGTTGTCTTAATATTAATATTGTTCTTGGTTGCGCTTTCGGGTTCAAGCTATATCAAACATGGCCATGAAGATTTGATTAAGAGATTAGTGTTTTTTTTTAGCAACGCTTGTGTTGGCTGAATGAGATGTTTCTCTTAATACCATGAAAGTATCCATTTTGATTGTGTTGTGGTGAAGAAGATCAATGTTTTTCCTCAAAATCAACCAAAACCTGTAGAACGTACTATTGGTTTTATGTTTTGTCAATTGAAGGAAAAATTTGCATAGTTAAATTCTTATAAGAAGTACTGACATGGTTTATAACGACAGGAAACAAGGGAGCAGCTATGGCGCTGTCATCACGGAGAATGAGAACAGGTAATTGTTTCAGCTGATTTTGAGCCCCTTTTCCCCCAATGAGATCTTAAAACTCCAAGGTATGGATATGAGAAAGAATCAAGTAAATCATAATCAAAAGCATGAGTGAATTGAGAAGAGAAAAAAGTGAAAACAGCAAAGGAAGAACTTCACAACAAATTATTGACAAAAAGAGTTTTACAAAGCACCTGCCATCTAATGATATATCTCTTGGTTCTGCAGCTCATTTGATGCCATAGTTATGGACTTCCCAGCGGCCGAGCACAACGACAAGTGCAGCTGCAACCCCTGCAGCTGTCCAGACTGTGGCTGCAACAATTGAACACATACATCTGTTATTTCAACTAGCACAGCTATGTGAACGCCAGTAATAATGTAGCTGTGTTTGAAAAAAAAAATAGTGTCTGTTTTATGTTCAAAACCTCTGTTCTTAGCAAGAGGTATGTTATGAATAATGTTTATTTCTGTTCTTCACCCACAGTCATGTAATGTTGGTCACTTCTGTGTCCATGGAGTTAATGGATAAGTTATACTAGTACACTCTCTTCCTCTCCATCCATTTTCATTTTTGTTCCATCTCATTCTTTATTCAAATCGAATTCATGTTTATAGAATCAATGAAACAATCTAGATGAGCTTCAGTACTTGGGAGAAACGTTACAGTATAGATATTGTCTGTATTTGATAATAATATCCAGACTCAAAAGGTCAGGTGGAATGACAAAGGCTTATAAATTGAAATAATAAAAACTTTCAAAATCTTGTGG CAAATGCTAACCAAAGTTTGAATCTTGAAATCAACTATATGTCACAAACAACAAACTGAAATTTAACTCCTTAAGCAAGAGGGTAACTTCAACAACCATTTTTATTCTGTTTCATATAAAACTTCATATGAACATCAATCTTCAGAAATGGTCTGTTTAATCAAAAGAAAAATGAAGTTGACATAAAAGAAGGATAGAAAGCCATACCTACATGATTCGGATTCTTTTGGACAGTTCGAAAGAGGCGTGTGGTTCTCTCCCATGCTTATCATCTCCCATTGCCAATGGCAGCGATCCTGCAGTATAAATACACAACCAAACTTCATGACTTGGAGATCATAAGCAGAAAAAAAAGAGACCATTAACAAGCTATCTGTTTCCCTTCTCTTGCAACTTTTTAGCTTCTTCACCATGTCGACATGTGGCAACTGCGACTGTTCCGACAAGACCCAATGCGTGAAACAAGGGAGCAGCTATGGCGCTGTCATCACGGAGAATGAGAACAGCTCATTTGATGCCATAGTTATGGACTTCCCAGCGGCCGAGCACAACGACAAGTGCAGCTGCAACCCCTGCAGCTGTCCAGACTGTGGCTGCAACAATTGAACACATACATCTGTTATTTCAACTAGCACAGCTATGTGAACGCCAGTAATAATGTAGCTGTGTTTGAAAAAAAAAATAGTGTCTGTTTTATGTTCAAAACCTCTGTTCTTAGCAAGAGGTATGTTATGAATAATGTTTATTTCTGTTCTTCACCCACAGTCATGTAATGTTGGTCACTTCTGTGTCCATGGAGTTAATGGATAAGTTATACTAGTACACTCTCTTCCTCTCCATCCATTTTCATTTTTGTTCCATCTCATTCTTTATTCAAATCGAATTCATGTTTATAGAATCAATGAAACAATCTAGATGAGCTTCAGTACTTGGGAGAAACGTTACAGTATAGATATTGTCTGTATTTGATAATAATATCCAGACTCAAAAGGTCAGGTGGAATGACAAAGGCTTATAAATTGAAATAATAAAAACTTTCAAAATCTTGTGG ATGTCGACATGTGGCAACTGCGACTGTTCCGACAAGACCCAATGCGTGAAACAAGGGAGCAGCTATGGCGCTGTCATCACGGAGAATGAGAACAGCTCATTTGATGCCATAGTTATGGACTTCCCAGCGGCCGAGCACAACGACAAGTGCAGCTGCAACCCCTGCAGCTGTCCAGACTGTGGCTGCAACAATTGA MSTCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCNPCSCPDCGCNN
BLAST of CsGy3G006280 vs. NCBI nr
Match: ACZ69388.1 (metallothionein-like protein type 3 [Cucumis sativus] >KGN56243.1 hypothetical protein Csa_3G105950 [Cucumis sativus]) HSP 1 Score: 119.0 bits (297), Expect = 5.8e-24 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of CsGy3G006280 vs. NCBI nr
Match: ADN33916.1 (metallothionein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 107.1 bits (266), Expect = 2.3e-20 Identity = 48/53 (90.57%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of CsGy3G006280 vs. NCBI nr
Match: PON68011.1 (Metallothionein-like protein type [Parasponia andersonii]) HSP 1 Score: 78.6 bits (192), Expect = 8.8e-12 Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of CsGy3G006280 vs. NCBI nr
Match: KJU81265.1 (hypothetical protein N619_00020, partial [Pseudomonas pseudoalcaligenes]) HSP 1 Score: 78.2 bits (191), Expect = 1.1e-11 Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = 0
BLAST of CsGy3G006280 vs. NCBI nr
Match: XP_002531714.1 (metallothionein-like protein type 3 [Ricinus communis] >EEF30673.1 conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 77.0 bits (188), Expect = 2.5e-11 Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0
BLAST of CsGy3G006280 vs. TAIR10
Match: AT3G15353.1 (metallothionein 3) HSP 1 Score: 53.5 bits (127), Expect = 5.5e-08 Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of CsGy3G006280 vs. Swiss-Prot
Match: sp|Q96386|MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya OX=3649 PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.5e-12 Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of CsGy3G006280 vs. Swiss-Prot
Match: sp|O24059|MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica OX=3750 GN=MT2 PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.5e-12 Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of CsGy3G006280 vs. Swiss-Prot
Match: sp|Q40256|MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata OX=4641 PE=3 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 6.0e-12 Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 0
BLAST of CsGy3G006280 vs. Swiss-Prot
Match: sp|O48951|MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium OX=42229 GN=MT1 PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 2.3e-11 Identity = 29/53 (54.72%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of CsGy3G006280 vs. Swiss-Prot
Match: sp|A2WLS0|MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica OX=39946 GN=MT3A PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.4e-08 Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of CsGy3G006280 vs. TrEMBL
Match: tr|D2J0B0|D2J0B0_CUCSA (Metallothionein-like protein type 3 OS=Cucumis sativus OX=3659 GN=MTP-3 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.9e-24 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of CsGy3G006280 vs. TrEMBL
Match: tr|E5GBS4|E5GBS4_CUCME (Metallothionein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.5e-20 Identity = 48/53 (90.57%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of CsGy3G006280 vs. TrEMBL
Match: tr|A0A2P5D400|A0A2P5D400_PARAD (Metallothionein-like protein type OS=Parasponia andersonii OX=3476 GN=PanWU01x14_098150 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 5.8e-12 Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of CsGy3G006280 vs. TrEMBL
Match: tr|A0A0F3GH62|A0A0F3GH62_PSEPS (Uncharacterized protein (Fragment) OS=Pseudomonas pseudoalcaligenes OX=330 GN=N619_00020 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 7.6e-12 Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = 0
BLAST of CsGy3G006280 vs. TrEMBL
Match: tr|B9T0E5|B9T0E5_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0507790 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.7e-11 Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|