CsGy3G006280 (gene) Cucumber (Gy14) v2

NameCsGy3G006280
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionMetallothionein-like protein
LocationChr3 : 5308417 .. 5310083 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATGCTAACCAAAGTTTGAATCTTGAAATCAACTATATGTCACAAACAACAAACTGAAATTTAACTCCTTAAGCAAGAGGGTAACTTCAACAACCATTTTTATTCTGTTTCATATAAAACTTCATATGAACATCAATCTTCAGAAATGGTCTGTTTAATCAAAAGAAAAATGAAGTTGACATAAAAGAAGGATAGAAAGCCATACCTACATGATTCGGATTCTTTTGGACAGTTCGAAAGAGGCGTGTGGTTCTCTCCCATGCTTATCATCTCCCATTGCCAATGGCAGCGATCCTGCAGTATAAATACACAACCAAACTTCATGACTTGGAGATCATAAGCAGAAAAAAAAGAGACCATTAACAAGCTATCTGTTTCCCTTCTCTTGCAACTTTTTAGCTTCTTCACCATGTCGACATGTGGCAACTGCGACTGTTCCGACAAGACCCAATGCGTGTAAGTAGTTTTTACCTACAAATTTATCAGCAAATCTAACTAAGAGTTTACTTGTCACAAGACTGATTCTGGTATGGCTACCAAAGTTGTCTTAATATTAATATTGTTCTTGGTTGCGCTTTCGGGTTCAAGCTATATCAAACATGGCCATGAAGATTTGATTAAGAGATTAGTGTTTTTTTTTAGCAACGCTTGTGTTGGCTGAATGAGATGTTTCTCTTAATACCATGAAAGTATCCATTTTGATTGTGTTGTGGTGAAGAAGATCAATGTTTTTCCTCAAAATCAACCAAAACCTGTAGAACGTACTATTGGTTTTATGTTTTGTCAATTGAAGGAAAAATTTGCATAGTTAAATTCTTATAAGAAGTACTGACATGGTTTATAACGACAGGAAACAAGGGAGCAGCTATGGCGCTGTCATCACGGAGAATGAGAACAGGTAATTGTTTCAGCTGATTTTGAGCCCCTTTTCCCCCAATGAGATCTTAAAACTCCAAGGTATGGATATGAGAAAGAATCAAGTAAATCATAATCAAAAGCATGAGTGAATTGAGAAGAGAAAAAAGTGAAAACAGCAAAGGAAGAACTTCACAACAAATTATTGACAAAAAGAGTTTTACAAAGCACCTGCCATCTAATGATATATCTCTTGGTTCTGCAGCTCATTTGATGCCATAGTTATGGACTTCCCAGCGGCCGAGCACAACGACAAGTGCAGCTGCAACCCCTGCAGCTGTCCAGACTGTGGCTGCAACAATTGAACACATACATCTGTTATTTCAACTAGCACAGCTATGTGAACGCCAGTAATAATGTAGCTGTGTTTGAAAAAAAAAATAGTGTCTGTTTTATGTTCAAAACCTCTGTTCTTAGCAAGAGGTATGTTATGAATAATGTTTATTTCTGTTCTTCACCCACAGTCATGTAATGTTGGTCACTTCTGTGTCCATGGAGTTAATGGATAAGTTATACTAGTACACTCTCTTCCTCTCCATCCATTTTCATTTTTGTTCCATCTCATTCTTTATTCAAATCGAATTCATGTTTATAGAATCAATGAAACAATCTAGATGAGCTTCAGTACTTGGGAGAAACGTTACAGTATAGATATTGTCTGTATTTGATAATAATATCCAGACTCAAAAGGTCAGGTGGAATGACAAAGGCTTATAAATTGAAATAATAAAAACTTTCAAAATCTTGTGG

mRNA sequence

CAAATGCTAACCAAAGTTTGAATCTTGAAATCAACTATATGTCACAAACAACAAACTGAAATTTAACTCCTTAAGCAAGAGGGTAACTTCAACAACCATTTTTATTCTGTTTCATATAAAACTTCATATGAACATCAATCTTCAGAAATGGTCTGTTTAATCAAAAGAAAAATGAAGTTGACATAAAAGAAGGATAGAAAGCCATACCTACATGATTCGGATTCTTTTGGACAGTTCGAAAGAGGCGTGTGGTTCTCTCCCATGCTTATCATCTCCCATTGCCAATGGCAGCGATCCTGCAGTATAAATACACAACCAAACTTCATGACTTGGAGATCATAAGCAGAAAAAAAAGAGACCATTAACAAGCTATCTGTTTCCCTTCTCTTGCAACTTTTTAGCTTCTTCACCATGTCGACATGTGGCAACTGCGACTGTTCCGACAAGACCCAATGCGTGAAACAAGGGAGCAGCTATGGCGCTGTCATCACGGAGAATGAGAACAGCTCATTTGATGCCATAGTTATGGACTTCCCAGCGGCCGAGCACAACGACAAGTGCAGCTGCAACCCCTGCAGCTGTCCAGACTGTGGCTGCAACAATTGAACACATACATCTGTTATTTCAACTAGCACAGCTATGTGAACGCCAGTAATAATGTAGCTGTGTTTGAAAAAAAAAATAGTGTCTGTTTTATGTTCAAAACCTCTGTTCTTAGCAAGAGGTATGTTATGAATAATGTTTATTTCTGTTCTTCACCCACAGTCATGTAATGTTGGTCACTTCTGTGTCCATGGAGTTAATGGATAAGTTATACTAGTACACTCTCTTCCTCTCCATCCATTTTCATTTTTGTTCCATCTCATTCTTTATTCAAATCGAATTCATGTTTATAGAATCAATGAAACAATCTAGATGAGCTTCAGTACTTGGGAGAAACGTTACAGTATAGATATTGTCTGTATTTGATAATAATATCCAGACTCAAAAGGTCAGGTGGAATGACAAAGGCTTATAAATTGAAATAATAAAAACTTTCAAAATCTTGTGG

Coding sequence (CDS)

ATGTCGACATGTGGCAACTGCGACTGTTCCGACAAGACCCAATGCGTGAAACAAGGGAGCAGCTATGGCGCTGTCATCACGGAGAATGAGAACAGCTCATTTGATGCCATAGTTATGGACTTCCCAGCGGCCGAGCACAACGACAAGTGCAGCTGCAACCCCTGCAGCTGTCCAGACTGTGGCTGCAACAATTGA

Protein sequence

MSTCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCNPCSCPDCGCNN
BLAST of CsGy3G006280 vs. NCBI nr
Match: ACZ69388.1 (metallothionein-like protein type 3 [Cucumis sativus] >KGN56243.1 hypothetical protein Csa_3G105950 [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 5.8e-24
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0

Query: 1  MSTCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCNPXXXXXX 60
          MSTCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCNPXXXXXX
Sbjct: 1  MSTCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCNPXXXXXX 60

Query: 61 XXNN 65
          XXNN
Sbjct: 61 XXNN 64

BLAST of CsGy3G006280 vs. NCBI nr
Match: ADN33916.1 (metallothionein-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-20
Identity = 48/53 (90.57%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 1  MSTCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCN 54
          MS+CGNCDCSDKTQCVK+G+SYGAVI ENENSSFDAIVM+FPAAEHNDKCSCN
Sbjct: 1  MSSCGNCDCSDKTQCVKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSCN 53

BLAST of CsGy3G006280 vs. NCBI nr
Match: PON68011.1 (Metallothionein-like protein type [Parasponia andersonii])

HSP 1 Score: 78.6 bits (192), Expect = 8.8e-12
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0

Query: 4  CGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSC 53
          CG+CDC+DK+QCVK+GSSY  VI E E S  DA+VMD PAAEHN KC C
Sbjct: 5  CGSCDCADKSQCVKKGSSYSLVIVETEKSYMDAVVMDAPAAEHNGKCKC 53

BLAST of CsGy3G006280 vs. NCBI nr
Match: KJU81265.1 (hypothetical protein N619_00020, partial [Pseudomonas pseudoalcaligenes])

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-11
Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = 0

Query: 2  STCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCNP 55
          STCGNCDC+DK+QCVK+GSSYG  I E   S  + IVMD PAAEH+ KC C P
Sbjct: 24 STCGNCDCADKSQCVKKGSSYGIDIVETGKSYVETIVMDAPAAEHDGKCKCGP 76

BLAST of CsGy3G006280 vs. NCBI nr
Match: XP_002531714.1 (metallothionein-like protein type 3 [Ricinus communis] >EEF30673.1 conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 77.0 bits (188), Expect = 2.5e-11
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0

Query: 2  STCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSC 53
          STCGNCDC+DK+QCVK+GSSY A + E E SS   IVM+ PAAEH+ KC C
Sbjct: 3  STCGNCDCADKSQCVKKGSSYTADVVETEKSSVSTIVMEVPAAEHDGKCKC 53

BLAST of CsGy3G006280 vs. TAIR10
Match: AT3G15353.1 (metallothionein 3)

HSP 1 Score: 53.5 bits (127), Expect = 5.5e-08
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 0

Query: 2  STCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEH 47
          S CG+CDC+DKTQCVK+G+SY   I E + S  +A++MD  A E+
Sbjct: 3  SNCGSCDCADKTQCVKKGTSYTFDIVETQESYKEAMIMDVGAEEN 47

BLAST of CsGy3G006280 vs. Swiss-Prot
Match: sp|Q96386|MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya OX=3649 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.5e-12
Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 0

Query: 3  TCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCNP 55
          TCGNCDC+DKTQCVK+GSSY A I E E S    +VMD PAAE++ KC C P
Sbjct: 4  TCGNCDCADKTQCVKKGSSYTADIIETEKSIM-TVVMDAPAAENDGKCKCGP 54

BLAST of CsGy3G006280 vs. Swiss-Prot
Match: sp|O24059|MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica OX=3750 GN=MT2 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.5e-12
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 0

Query: 4  CGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSC 53
          C NCDC+D TQCVK+G+SY  VI E EN S D + +D PAAEH+ KC C
Sbjct: 5  CDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFVDAPAAEHDGKCKC 53

BLAST of CsGy3G006280 vs. Swiss-Prot
Match: sp|Q40256|MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata OX=4641 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.0e-12
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 0

Query: 1  MSTCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSC 53
          MSTCGNCDC DK+QCVK+G+SYG  I E E S  D +++   AAEH+ KC C
Sbjct: 1  MSTCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVAAEAAEHDGKCKC 52

BLAST of CsGy3G006280 vs. Swiss-Prot
Match: sp|O48951|MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium OX=42229 GN=MT1 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.3e-11
Identity = 29/53 (54.72%), Postives = 35/53 (66.04%), Query Frame = 0

Query: 2  STCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCNP 55
          S C NCDCSD +QC K+G S+  VI E EN S D ++MD PAAE+   C C P
Sbjct: 3  SKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVIMDAPAAENGGNCKCGP 55

BLAST of CsGy3G006280 vs. Swiss-Prot
Match: sp|A2WLS0|MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica OX=39946 GN=MT3A PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-08
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 0

Query: 4  CGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSC 53
          CGNCDC+DK+QCVK+G+SYG VI E E S F+ +     A E N  C C
Sbjct: 5  CGNCDCADKSQCVKKGTSYGVVIVEAEKSHFEEVA----AGEENGGCKC 49

BLAST of CsGy3G006280 vs. TrEMBL
Match: tr|D2J0B0|D2J0B0_CUCSA (Metallothionein-like protein type 3 OS=Cucumis sativus OX=3659 GN=MTP-3 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.9e-24
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0

Query: 1  MSTCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCNPXXXXXX 60
          MSTCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCNPXXXXXX
Sbjct: 1  MSTCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCNPXXXXXX 60

Query: 61 XXNN 65
          XXNN
Sbjct: 61 XXNN 64

BLAST of CsGy3G006280 vs. TrEMBL
Match: tr|E5GBS4|E5GBS4_CUCME (Metallothionein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-20
Identity = 48/53 (90.57%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 1  MSTCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCN 54
          MS+CGNCDCSDKTQCVK+G+SYGAVI ENENSSFDAIVM+FPAAEHNDKCSCN
Sbjct: 1  MSSCGNCDCSDKTQCVKKGNSYGAVIMENENSSFDAIVMNFPAAEHNDKCSCN 53

BLAST of CsGy3G006280 vs. TrEMBL
Match: tr|A0A2P5D400|A0A2P5D400_PARAD (Metallothionein-like protein type OS=Parasponia andersonii OX=3476 GN=PanWU01x14_098150 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.8e-12
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0

Query: 4  CGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSC 53
          CG+CDC+DK+QCVK+GSSY  VI E E S  DA+VMD PAAEHN KC C
Sbjct: 5  CGSCDCADKSQCVKKGSSYSLVIVETEKSYMDAVVMDAPAAEHNGKCKC 53

BLAST of CsGy3G006280 vs. TrEMBL
Match: tr|A0A0F3GH62|A0A0F3GH62_PSEPS (Uncharacterized protein (Fragment) OS=Pseudomonas pseudoalcaligenes OX=330 GN=N619_00020 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.6e-12
Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = 0

Query: 2  STCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSCNP 55
          STCGNCDC+DK+QCVK+GSSYG  I E   S  + IVMD PAAEH+ KC C P
Sbjct: 24 STCGNCDCADKSQCVKKGSSYGIDIVETGKSYVETIVMDAPAAEHDGKCKCGP 76

BLAST of CsGy3G006280 vs. TrEMBL
Match: tr|B9T0E5|B9T0E5_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0507790 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-11
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0

Query: 2  STCGNCDCSDKTQCVKQGSSYGAVITENENSSFDAIVMDFPAAEHNDKCSC 53
          STCGNCDC+DK+QCVK+GSSY A + E E SS   IVM+ PAAEH+ KC C
Sbjct: 3  STCGNCDCADKSQCVKKGSSYTADVVETEKSSVSTIVMEVPAAEHDGKCKC 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ACZ69388.15.8e-24100.00metallothionein-like protein type 3 [Cucumis sativus] >KGN56243.1 hypothetical p... [more]
ADN33916.12.3e-2090.57metallothionein-like protein [Cucumis melo subsp. melo][more]
PON68011.18.8e-1269.39Metallothionein-like protein type [Parasponia andersonii][more]
KJU81265.11.1e-1166.04hypothetical protein N619_00020, partial [Pseudomonas pseudoalcaligenes][more]
XP_002531714.12.5e-1166.67metallothionein-like protein type 3 [Ricinus communis] >EEF30673.1 conserved hyp... [more]
Match NameE-valueIdentityDescription
AT3G15353.15.5e-0853.33metallothionein 3[more]
Match NameE-valueIdentityDescription
sp|Q96386|MT3_CARPA3.5e-1265.38Metallothionein-like protein type 3 OS=Carica papaya OX=3649 PE=3 SV=1[more]
sp|O24059|MT3_MALDO3.5e-1261.22Metallothionein-like protein type 3 OS=Malus domestica OX=3750 GN=MT2 PE=3 SV=1[more]
sp|Q40256|MT3_MUSAC6.0e-1259.62Metallothionein-like protein type 3 OS=Musa acuminata OX=4641 PE=3 SV=1[more]
sp|O48951|MT3_PRUAV2.3e-1154.72Metallothionein-like protein 1 OS=Prunus avium OX=42229 GN=MT1 PE=3 SV=1[more]
sp|A2WLS0|MT3A_ORYSI1.4e-0855.10Metallothionein-like protein 3A OS=Oryza sativa subsp. indica OX=39946 GN=MT3A P... [more]
Match NameE-valueIdentityDescription
tr|D2J0B0|D2J0B0_CUCSA3.9e-24100.00Metallothionein-like protein type 3 OS=Cucumis sativus OX=3659 GN=MTP-3 PE=2 SV=... [more]
tr|E5GBS4|E5GBS4_CUCME1.5e-2090.57Metallothionein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A2P5D400|A0A2P5D400_PARAD5.8e-1269.39Metallothionein-like protein type OS=Parasponia andersonii OX=3476 GN=PanWU01x14... [more]
tr|A0A0F3GH62|A0A0F3GH62_PSEPS7.6e-1266.04Uncharacterized protein (Fragment) OS=Pseudomonas pseudoalcaligenes OX=330 GN=N6... [more]
tr|B9T0E5|B9T0E5_RICCO1.7e-1166.67Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0507790 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006878 cellular copper ion homeostasis
cellular_component GO:0005575 cellular_component
molecular_function GO:0005507 copper ion binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G006280.1CsGy3G006280.1mRNA