CmoCh04G009700 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGAGATCATAAGCCAAAAAAAGTTCCATAAGCTATCAGTTTTTCGTTCTCCTACAACTTCTCTAGCTTCTACACCATGTCAGGCAAGTGCGGCAACTGCGACTGCTCCGACAGCAGCAACTGCGTGTAAGTATTTTTTTTGTTTTCCTACGAACTTCGCAGCAAATCTCATCAAGAGCTTGCTTGTCTCAAAGCTATGATTCTGTTGCCCTCTCAGAAATTGTCTTAATATAGCAAGTCTGTCAATATGGTCCTTGGTTGCCCTCCCAATTATGACAGTTTGTTTGATGCTATAAAGGGAAGCAGAAGGGGCAATAAACTCTATTGGGGTGAAACTAAGAGTTCGAATCCAAATTATAGTGTCGCTGCAAATAAGATAATTATAAAACCACTTTTTCTTTCTTTTCCTTCACAGTATGACCAAATCAAAACTAAAAAATTACTAGTAAAAAAAAGGATTGAAAAGTTTGCATATTCGAATTCATTTCTATGTTAATGACGTGCTCTATAATGACAGGAAAAAAGGGAACAGCTATGGCGCTGTCATCATGGAGAATGAGAAGAGGTAATTTTTTCAGCTCATCGGGCATATACCTTCTTCAAAACAGATTATTTAGAGCCCATTTTTTTCATGAAAAACTCAAATTCAAAGGGTGTAAACAAAAGTATGTTTAGATTTAGAAAAAAAAGAGTGGAGCAGAGACAAAAGAAATCTCAACAAGTTATTAACTAAAAGTGCTTGATAGTACCTGGCATCTAACAATGAATCTCTTGGTTCTGCAGCTACTTTGACGCCATAGACATGGACGTCCCAGCGGCCGAGCACAATGACAAGTGCAGCTGCAACCCCTGCAGTTGCAAGGACTGCCACTGCGGCAAATGAACACATACACCTGTTGTTTCCATTAACACAGTTATATAAAGCCAGGAATAATGTAGCTGTGTTTGAAATGTGTCCTATTATGTTCAAAACCTCTGTGCTTAGCTAGAGGTGTGTTACGAATAATATCTACTTCTGTTCTTCATCCATAGTCATGTAATGCTGGTCACTTCTGTGGCCATGGGTTAACTATTAATGGATAAGTTATATACTAGTACACTCTCCCTCTCCTTCCATTTTTATTGTGGTTCTTTTCATCCTTGATTCAATTTGACTACAAATTACAAAGAGGAAACAATCTAGAAGTGCTTCAATACTTCTAAGAGTAGTGTAATACAACAAA TAGAGATCATAAGCCAAAAAAAGTTCCATAAGCTATCAGTTTTTCGTTCTCCTACAACTTCTCTAGCTTCTACACCATGTCAGGCAAGTGCGGCAACTGCGACTGCTCCGACAGCAGCAACTGCGTGAAAAAAGGGAACAGCTATGGCGCTGTCATCATGGAGAATGAGAAGAGCTACTTTGACGCCATAGACATGGACGTCCCAGCGGCCGAGCACAATGACAAGTGCAGCTGCAACCCCTGCAGTTGCAAGGACTGCCACTGCGGCAAATGAACACATACACCTGTTGTTTCCATTAACACAGTTATATAAAGCCAGGAATAATGTAGCTGTGTTTGAAATGTGTCCTATTATGTTCAAAACCTCTGTGCTTAGCTAGAGGTGTGTTACGAATAATATCTACTTCTGTTCTTCATCCATAGTCATGTAATGCTGGTCACTTCTGTGGCCATGGGTTAACTATTAATGGATAAGTTATATACTAGTACACTCTCCCTCTCCTTCCATTTTTATTGTGGTTCTTTTCATCCTTGATTCAATTTGACTACAAATTACAAAGAGGAAACAATCTAGAAGTGCTTCAATACTTCTAAGAGTAGTGTAATACAACAAA ATGTCAGGCAAGTGCGGCAACTGCGACTGCTCCGACAGCAGCAACTGCGTGAAAAAAGGGAACAGCTATGGCGCTGTCATCATGGAGAATGAGAAGAGCTACTTTGACGCCATAGACATGGACGTCCCAGCGGCCGAGCACAATGACAAGTGCAGCTGCAACCCCTGCAGTTGCAAGGACTGCCACTGCGGCAAATGA
BLAST of CmoCh04G009700 vs. Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 8.9e-16 Identity = 39/65 (60.00%), Postives = 45/65 (69.23%), Query Frame = 1
BLAST of CmoCh04G009700 vs. Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.3e-14 Identity = 37/61 (60.66%), Postives = 42/61 (68.85%), Query Frame = 1
BLAST of CmoCh04G009700 vs. Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.3e-14 Identity = 40/66 (60.61%), Postives = 45/66 (68.18%), Query Frame = 1
BLAST of CmoCh04G009700 vs. Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.3e-14 Identity = 40/66 (60.61%), Postives = 45/66 (68.18%), Query Frame = 1
BLAST of CmoCh04G009700 vs. Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 4.9e-14 Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 1
BLAST of CmoCh04G009700 vs. TrEMBL
Match: E5GBS4_CUCME (Metallothionein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 8.4e-21 Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 1
BLAST of CmoCh04G009700 vs. TrEMBL
Match: D2J0B0_CUCSA (Metallothionein-like protein type 3 OS=Cucumis sativus GN=MTP-3 PE=2 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 3.2e-20 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = 1
BLAST of CmoCh04G009700 vs. TrEMBL
Match: A0A0F3GH62_PSEPS (Uncharacterized protein (Fragment) OS=Pseudomonas pseudoalcaligenes GN=N619_00020 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 4.0e-15 Identity = 41/66 (62.12%), Postives = 47/66 (71.21%), Query Frame = 1
BLAST of CmoCh04G009700 vs. TrEMBL
Match: O49126_FRIAG (Metallothionein type I OS=Fritillaria agrestis GN=MET PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.2e-14 Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 1
BLAST of CmoCh04G009700 vs. TrEMBL
Match: B9TSW7_9LILI (Metallothionein-like protein OS=Lilium formosanum GN=MT1 PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.2e-14 Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 1
BLAST of CmoCh04G009700 vs. TAIR10
Match: AT3G15353.1 (AT3G15353.1 metallothionein 3) HSP 1 Score: 67.8 bits (164), Expect = 2.8e-12 Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 1
BLAST of CmoCh04G009700 vs. NCBI nr
Match: gi|307136066|gb|ADN33916.1| (metallothionein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-20 Identity = 48/59 (81.36%), Postives = 51/59 (86.44%), Query Frame = 1
BLAST of CmoCh04G009700 vs. NCBI nr
Match: gi|270300603|gb|ACZ69388.1| (metallothionein-like protein type 3 [Cucumis sativus]) HSP 1 Score: 105.1 bits (261), Expect = 4.6e-20 Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = 1
BLAST of CmoCh04G009700 vs. NCBI nr
Match: gi|782990300|gb|KJU81265.1| (hypothetical protein N619_00020, partial [Pseudomonas pseudoalcaligenes]) HSP 1 Score: 88.2 bits (217), Expect = 5.8e-15 Identity = 41/66 (62.12%), Postives = 47/66 (71.21%), Query Frame = 1
BLAST of CmoCh04G009700 vs. NCBI nr
Match: gi|2754853|gb|AAB95220.1| (metallothionein type I [Fritillaria agrestis]) HSP 1 Score: 86.7 bits (213), Expect = 1.7e-14 Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 1
BLAST of CmoCh04G009700 vs. NCBI nr
Match: gi|734328192|gb|KHN05949.1| (Metallothionein-like protein type 3 [Glycine soja]) HSP 1 Score: 86.7 bits (213), Expect = 1.7e-14 Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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