MELO3C016512.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTGCCAGAATTTTTGCCTGTAAGAAATTTTCCTTTTTAGCAAACAAGATTGTTACTTTGTTTTCAGGTTCTTACTTTTGGCTCTATGAAATTTTATCTTTCCATTATATCGGTTGTTTGATGGGAAATCAAATAGGAAGATCAGATGATTTATTTCTGGTATAGTTGAGTTGGGGTGCTTCGAATGTGTTCTATTGAAGGTCTTGTCTTCTGTTTTCTTATTTGATGACTCTCTTCAAGTTCCAGTAAAAAATGAAATTTGTAAATCTAATCATATCTCAACTGGTTTCAACTGGTTTATGTACATAGTGAGGCACCACCCTTACTGGTTTATGATTCAGTAGCCCATTAAGTTAAATTTACCATGATATAATTTGATGTTCTTCATAATCATATTTTTCTGCTTGCAGTTTTCAGGATTTCCTTCCCTTTTTTTAAGACTGCATTCCTTCAGAAATTGTGGCATGGGTGGTTTACCTGTTGTAAATTCTTCATCAGCCATAGCATTGCCGGAATCGAAACTTGACCAAGCGTCAACAGTCGTCAAGTCGACCCCAGATGGAAAACCAAAAAAGAAGATATGTTGTGCCTGTCCCGATACTAAGAAGCTTAGAGATGAGTGCATAGTGGAGCATGGTGAAGAAGCATGTGGAAAATGGATCGAGGCTCATCGTAAGTGTCTTCGCGCGGAGGGATTCAACGTCTGAACTTGATAACCTAATACAATGAAAGATTTGATTTTCTGCTAGTTTACAGTTTAGATATTTGAGAGATACAGATACCAGAGAAAATTGAGAAATAAAGTGAGAAAGAAGGTATAGCCAAAGCTGCAATGCAGTAAGTACAATTTGGCTTCGTATTTTTGTAGGCTCGGGCCTTTGTTATTGACTTACTGTATTAATTTCCTCATGTTGTTCAAAATTTCTTACTATTTCTTCTTTATTCTGCATCAATATCATGTCATATGTT GCTGCCAGAATTTTTGCCTGTAAGAAATTTTCCTTTTTAGCAAACAAGATTGTTACTTTGTTTTCAGGTTCTTACTTTTGGCTCTATGAAATTTTATCTTTCCATTATATCGGTTGTTTGATGGGAAATCAAATAGGAAGATCAGATGATTTATTTCTGGTATAGTTGAGTTGGGGTGCTTCGAATGTGTTCTATTGAAGGTCTTGTCTTCTGTTTTCTTATTTGATGACTCTCTTCAAGTTCCAGTAAAAAATGAAATTTGTAAATCTAATCATATCTCAACTGGTTTCAACTGGTTTATGTACATATTTTCAGGATTTCCTTCCCTTTTTTTAAGACTGCATTCCTTCAGAAATTGTGGCATGGGTGGTTTACCTGTTGTAAATTCTTCATCAGCCATAGCATTGCCGGAATCGAAACTTGACCAAGCGTCAACAGTCGTCAAGTCGACCCCAGATGGAAAACCAAAAAAGAAGATATGTTGTGCCTGTCCCGATACTAAGAAGCTTAGAGATGAGTGCATAGTGGAGCATGGTGAAGAAGCATGTGGAAAATGGATCGAGGCTCATCGTAAGTGTCTTCGCGCGGAGGGATTCAACGTCTGAACTTGATAACCTAATACAATGAAAGATTTGATTTTCTGCTAGTTTACAGTTTAGATATTTGAGAGATACAGATACCAGAGAAAATTGAGAAATAAAGTGAGAAAGAAGGTATAGCCAAAGCTGCAATGCAGTAAGTACAATTTGGCTTCGTATTTTTGTAGGCTCGGGCCTTTGTTATTGACTTACTGTATTAATTTCCTCATGTTGTTCAAAATTTCTTACTATTTCTTCTTTATTCTGCATCAATATCATGTCATATGTT ATGTACATATTTTCAGGATTTCCTTCCCTTTTTTTAAGACTGCATTCCTTCAGAAATTGTGGCATGGGTGGTTTACCTGTTGTAAATTCTTCATCAGCCATAGCATTGCCGGAATCGAAACTTGACCAAGCGTCAACAGTCGTCAAGTCGACCCCAGATGGAAAACCAAAAAAGAAGATATGTTGTGCCTGTCCCGATACTAAGAAGCTTAGAGATGAGTGCATAGTGGAGCATGGTGAAGAAGCATGTGGAAAATGGATCGAGGCTCATCGTAAGTGTCTTCGCGCGGAGGGATTCAACGTCTGA MYIFSGFPSLFLRLHSFRNCGMGGLPVVNSSSAIALPESKLDQASTVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFNV
BLAST of MELO3C016512.2 vs. NCBI nr
Match: XP_004133710.1 (PREDICTED: cytochrome c oxidase copper chaperone 2-like [Cucumis sativus] >XP_004133711.1 PREDICTED: cytochrome c oxidase copper chaperone 2-like [Cucumis sativus] >XP_011650564.1 PREDICTED: cytochrome c oxidase copper chaperone 2-like [Cucumis sativus] >KGN56244.1 Cytochrome c oxidase copper chaperone [Cucumis sativus]) HSP 1 Score: 168.7 bits (426), Expect = 1.0e-38 Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of MELO3C016512.2 vs. NCBI nr
Match: XP_016901211.1 (PREDICTED: LOW QUALITY PROTEIN: cytochrome c oxidase copper chaperone 2 [Cucumis melo]) HSP 1 Score: 166.8 bits (421), Expect = 3.9e-38 Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of MELO3C016512.2 vs. NCBI nr
Match: XP_022142851.1 (cytochrome c oxidase copper chaperone 1-like [Momordica charantia] >XP_022142852.1 cytochrome c oxidase copper chaperone 1-like [Momordica charantia]) HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34 Identity = 72/80 (90.00%), Postives = 75/80 (93.75%), Query Frame = 0
BLAST of MELO3C016512.2 vs. NCBI nr
Match: XP_022943031.1 (cytochrome c oxidase copper chaperone 2-like [Cucurbita moschata] >XP_022943032.1 cytochrome c oxidase copper chaperone 2-like [Cucurbita moschata] >XP_022977644.1 cytochrome c oxidase copper chaperone 2 [Cucurbita maxima] >XP_022977652.1 cytochrome c oxidase copper chaperone 2 [Cucurbita maxima] >XP_022977660.1 cytochrome c oxidase copper chaperone 2 [Cucurbita maxima] >XP_023524945.1 cytochrome c oxidase copper chaperone 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 142.5 bits (358), Expect = 7.8e-31 Identity = 69/80 (86.25%), Postives = 70/80 (87.50%), Query Frame = 0
BLAST of MELO3C016512.2 vs. NCBI nr
Match: XP_020554450.1 (cytochrome c oxidase copper chaperone 2 [Sesamum indicum] >XP_020554451.1 cytochrome c oxidase copper chaperone 2 [Sesamum indicum] >XP_020554452.1 cytochrome c oxidase copper chaperone 2 [Sesamum indicum]) HSP 1 Score: 133.7 bits (335), Expect = 3.6e-28 Identity = 63/80 (78.75%), Postives = 69/80 (86.25%), Query Frame = 0
BLAST of MELO3C016512.2 vs. TAIR10
Match: AT3G15352.1 (cytochrome c oxidase 17) HSP 1 Score: 98.2 bits (243), Expect = 3.1e-21 Identity = 42/52 (80.77%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of MELO3C016512.2 vs. TAIR10
Match: AT1G53030.1 (Cytochrome C oxidase copper chaperone (COX17)) HSP 1 Score: 95.1 bits (235), Expect = 2.6e-20 Identity = 45/61 (73.77%), Postives = 50/61 (81.97%), Query Frame = 0
BLAST of MELO3C016512.2 vs. Swiss-Prot
Match: sp|Q9LJQ9|CX171_ARATH (Cytochrome c oxidase copper chaperone 1 OS=Arabidopsis thaliana OX=3702 GN=COX17-1 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 5.5e-20 Identity = 42/52 (80.77%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of MELO3C016512.2 vs. Swiss-Prot
Match: sp|Q94FT1|CX172_ARATH (Cytochrome c oxidase copper chaperone 2 OS=Arabidopsis thaliana OX=3702 GN=COX17-2 PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 4.7e-19 Identity = 45/61 (73.77%), Postives = 50/61 (81.97%), Query Frame = 0
BLAST of MELO3C016512.2 vs. Swiss-Prot
Match: sp|Q54ID0|COX17_DICDI (Cytochrome c oxidase copper chaperone OS=Dictyostelium discoideum OX=44689 GN=cox17 PE=3 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.7e-13 Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of MELO3C016512.2 vs. Swiss-Prot
Match: sp|P81045|COX17_PIG (Cytochrome c oxidase copper chaperone OS=Sus scrofa OX=9823 GN=COX17 PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 5.5e-12 Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of MELO3C016512.2 vs. Swiss-Prot
Match: sp|Q14061|COX17_HUMAN (Cytochrome c oxidase copper chaperone OS=Homo sapiens OX=9606 GN=COX17 PE=1 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 7.2e-12 Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of MELO3C016512.2 vs. TrEMBL
Match: tr|A0A0A0L5D1|A0A0A0L5D1_CUCSA (Cytochrome c oxidase copper chaperone OS=Cucumis sativus OX=3659 GN=Csa_3G105960 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 6.7e-39 Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of MELO3C016512.2 vs. TrEMBL
Match: tr|A0A1S4DYZ5|A0A1S4DYZ5_CUCME (LOW QUALITY PROTEIN: cytochrome c oxidase copper chaperone 2 OS=Cucumis melo OX=3656 GN=LOC103493331 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.6e-38 Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of MELO3C016512.2 vs. TrEMBL
Match: tr|A0A2I4EU53|A0A2I4EU53_9ROSI (cytochrome c oxidase copper chaperone 1-like OS=Juglans regia OX=51240 GN=LOC108992754 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.6e-27 Identity = 61/80 (76.25%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of MELO3C016512.2 vs. TrEMBL
Match: tr|A0A2P5D3Y5|A0A2P5D3Y5_PARAD (Cytochrome c oxidase copper chaperone OS=Parasponia andersonii OX=3476 GN=PanWU01x14_098160 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.6e-27 Identity = 61/80 (76.25%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of MELO3C016512.2 vs. TrEMBL
Match: tr|V4ULF0|V4ULF0_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10010072mg PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.6e-27 Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|