CmaCh04G009020 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G009020
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cytochrome c oxidase copper chaperone
Location	Cma_Chr04 : 4698330 .. 4702294 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCTTGACCTCGGAAACCATCCAACTTTGGCACTTATGTGGCCGTGTTCTCACATTACTATTCACAAAAGTTGTAAATCTCATTGTTAGGCAACGAGGCAACTAGTCAAGGAGAATGATAAAAAATGATCAAGTGAGTTATTTATTATCTCATTATGGAAAAAATAAAATATCATAATTATCATAATTATCATAATTATCGTATTTTCTCTATTAGAGGCCCAGGCCCATGACCAGGCCCATATTAGGAAACTCGCGCGTCCCACTTTTGAGCCCTAATTGACATTTATTTCCCCTTTTGGTCTGGAATCTTTCTACTTTCTCAAATTGCTTTGCTTTGACGCTTTCCAAATCCCTATTCGTCTTTCTTCGGCTCAGGGTTTGTCCAGGATCTTCGGCGTGCGGGGTTCGAAAGGTAAGCTTCGAATTTCTCTGCTTCTTTGGTCTCCCTACTGCTTTCTTCCATTTCATAGCTGGACTTTTCGCCTTCTCTTACAATTTTTTTTTCTTTTCAGTACACAGGTTTCTTCCGCTTAATTTTCTCTTTCCGATTGATCGGTTCGGTTGTTTGATGGAAAGTCGATTAAGTTTTTTTTTTTCCTTCTGGAATGTTGGGTTGGGGTGTTTTGCATGTGTGTCATTGGCGAAGATAGTTGTTGTGAAGGTCTCTACTCCTGGTTTTTTATTGGATGACTTTCTTCGATTGCAAGTAAAGAATAAAATTTGGGTTTTGAAGGATTTTATGATTTAGTTGGCGGTGATTAAGTAAGAGTATAGTGATTCGGTTGGGGTCTTTGGATTGATGAATGTTTTCTACTTCTATATATATATATATATATATCCCCTTATTGGAAAACTTTCTCTGCTTAACCAATAGTGGAATTTTGTTTAGAAAGCATAACATAATTCAGTTTGCCTGTGATCAAGTAAGATTTTTTTTACCCATAAGCCTTCACTATGATCTAATTCGATGTTCTTCATTCTCACGTTCTTCTGCTTGCAGCTTTCAGGATTTCATTGCCTTTTCCTTAAGACTGCATTCCTTGAGAAATTGTGACATGGGTGGGCTACCTGTTGGAAATTCTTCGGAGTCCAAACTTGAGCAGGGATCAGCAGTGGTTAAGTCTACCCCAGATGGAAAACCAAAAAAGAAGATTTGTTGTGCCTGTCCTGATACTAAGAAGCTAAGAGATGAGTGCATTGTAGAACATGGTGAAGAATTCTGTGGTAAATGGATTGAGGCTCATCGTAAGTGTCTTCGTGCAGAGGGGTTCAACGTCTGAACTTGATAAGCCAATCATATGAACTATTTGATTTTCTGCTAGTGTACAATTTACCATTTCAGGTATACATAGATAACAGAGAAAATTGAGAAATAAAGTGAGCGAGAGAGTAGGCATAGGAAAAGCTGCAGTGCAGCAAGTTCAATTTGGCTGCGTATTTTTGTTGACTTGGGCCTTTGTTCATGTATTAACTTCCTTCTGTTATGCATAATTTCTTACTATCTCTTCTTTATTTGATGCCCAACAAATTCTATATCAATATCATGTGTTCTAAATTTATGATTCTCGCCTGATGTTGAATTGGTGGATCTGAAGTTTTGAACATCGAATTTTGTAGTAGTAGACTTATAGTGATTAGATCTTGTATTATATCAAGATAAGATAACCACAACGGGTTTGTCCGAGTCTGATAGAGAAAGGACAAGGTCTTAATGTACATGACTGATGTCTTTTGAGGTCAAGAGGTACACTTGTTAGAGTTTCTTAAGGCCGGTGATTTTGGGTCCAAAGGCATTCCTGCCTTTATGTATCATCATAGCATCTGCTAATAGCTTGTTTTTTCATCCTTTATTTTTTGAGTGTAAAAGTTGCAATTGACATGGTTTTGGATGTTATTAATGAGTTGTTGTTGAGAAGATGCGGTGTCCTACCTAAGAAAAGAGTAAAAAAAGTGGCCAACAAGATGCTGTGATGCACTGTGCATTCTGGGCTTGATTTGAATCAGTTGTTTGCCAGGTTTACTATTTTGAGGAAATTGTTCTATTTGGTTTGTGGAATTCTATAGATTTTGTTGTATTACACTACTCTAAAAAGTATTGAAGCCCTTCTAGATTGTTTCCTCGTTGTACTTTGTAGTCAAATTGAATCAAGGATGAAAAGAACCACAATAAAAATGGAAGGAGAGGGAGAGTGTACTAGTATATAACTTATCCATTAATAGTTAAACCATGGCCACGGATGTGACCAGCATTACATGACTATGGATGAAGAACAGAAGTAGATATTATTCGTAACACACCTCTAGCTAAGCACAGAGGTTTTGAACATAATAGGACACTTTTCAAACACAGCTACATTATTTCTGGCTTTATATAACTGTGTTAATGGAAACAACAGGTGTATATGTTCATTTGCCGCAGTGGCAGTCCTTGCAACTGCAGGGGTTGCAGCTGCACTTGTCATTGTGCTCGGCCGCTGGGACGTCCATGTCTATGGCGTCAAAGTAGCTTCAGAACCAAGAGATTCATTGTTAGATGCCAGGTACCATCAAGCACTTTTAGTTAATAACTTGTTGAGATTTCTTTTGTCTCTGCTCCACTCTTTTTTTCTAAATCTAAACATACTTTTGTTTACATCCTTTGAATTTGAGTTTTTCATGAAAAAAAATGGGCTCTAAATCATCTCTTTAGAAGAAGGTATATGCCCGATGAGCTGAAAAAATTACCTCTTCTCATTCTCCATGATGACAGCGCCATAGCTGTTCCCTTTTTTCCTGTCATTATAGAGCACGTCATTAACATAGAAATGAATTCGAATATGCAAACTTTTCAATCCTTTTTTTACTAGTAATTTTTTAGTTTTGATTTGGTCATACTGTGAAGGAAAAGAAAAAAAAAGTGGTTTTATGATGATCTTATTTGCAGCGACACTATAATTTGGATTCGAACTTTTAGTTTCACCCCAATAGGGTTTATTGCCCCTTCTGCTTCCCTTTATAGCATCAAACAAACTGTCATAATTGGAAACTTCTAATATTATTGCAGGGAGGGCAACCAAGGACCACCTTGACAGACTTGATATATTAAGACAATTTCTGAGAGGGCAACAGAATCATAGCTTTGAGACAAGCAAGCTCTTGATGAGATTTGCTGCAAAGTTCGTAGGAAAACAAAGAAAAAAAAAAAAAAATACTTACACGCAGTTGCTGCTGTCGGAGCAGTCGCAGTTGCCGCACTTGCCTGACATGGTGAAGAAGCTAGAGAAGTTGTAGGAGAAGGAAAAACTGATAGCTTATGGAACTTTTTTTGGCTTATGATCTCTAAGTCTTGAGTATGGTTGTGTATTTATAGTGCAGGGCCATGGCGTTGGCATTGGCAAGGAGTGGCCGAGATGAATGCCAAGTATGGGAGAAGCACACGCCTCTTCTGAACTGTCCAAAAGAATTCGAATCATATAGGTCTGCCTTTCTATCCTTCTCTAATGTCAACTTCACTTTTCTTTTCTATTTTTCTTCTGTAAATTGGGAAATCTGGAAATAACCTTCTTAGTGCATTTGAAATTTGATCATATGCCCCTGAAATAGCTGGTTAGTGAAGTTCCTGTCTGCTTAATAGAATATCATGAAACTTTAGTTTGTTTGATTTCAAGATTCAAGCTTTGGCCTTAATTTGTTGATAATATCTTGAAGAATAATTTCTTCAAAATGTTATGAAACCCATCAAAATACATTCTGTCTTCTTTTTTCATTGCTATCATATCCAATCTCTTTTTCCTGCTTTTGAGAAGAAGTTGGATTCTACATGACATGGAATAGAATAGGAAAAAAAAGTGGTAACAGTGACATAGTTGAGGCTAAATTCAGCTCTTATTAACAACGACATAGACATAGTTAATTCAATTGATTTACGGTTCTAAGCTAGATTTGTTATATTTTTATCATGAAAGGAGGTGAAGATTGAT

mRNA sequence

ATGAGGCTTGACCTCGGAAACCATCCAACTTTGGCACTTATGTGGCCGTGTTCTCACATTACTATTCACAAAAGTTGGTTTGTCCAGGATCTTCGGCGTGCGGGGTTCGAAAGCTTTCAGGATTTCATTGCCTTTTCCTTAAGACTGCATTCCTTGAGAAATTGTGACATGGGTGGGCTACCTGTTGGAAATTCTTCGGAGTCCAAACTTGAGCAGGGATCAGCAGTGGTTAAGTCTACCCCAGATGGAAAACCAAAAAAGAAGATTTGTTGTGCCTGTCCTGATACTAAGAAGCTAAGAGATGAGTGCATTGTAGAACATGGTGAAGAATTCTGTGGTAAATGGATTGAGGCTCATCGTAAGTGTCTTCGTGCAGAGGGGTTCAACGTCTGAACTTGATAAGCCAATCATATGAACTATTTGATTTTCTGCTAGTGTACAATTTACCATTTCAGGTATACATAGATAACAGAGAAAATTGAGAAATAAAGTGAGCGAGAGAGTAGGCATAGGAAAAGCTGCAGTGCAGCAAGTTCAATTTGGCTGCGTATTTTTGTTGACTTGGGCCTTTGTTCATGTATTAACTTCCTTCTGTTATGCATAATTTCTTACTATCTCTTCTTTATTTGATGCCCAACAAATTCTATATCAATATCATGTGTTCTAAATTTATGATTCTCGCCTGATGTTGAATTGGTGGATCTGAAGTTTTGAACATCGAATTTTGTAGTAGTAGACTTATAGTGATTAGATCTTGTATTATATCAAGATAAGATAACCACAACGGGTTTGTCCGAGTCTGATAGAGAAAGGACAAGGTCTTAATGTACATGACTGATGTCTTTTGAGGTCAAGAGGTACACTTGTTAGAGTTTCTTAAGGCCGGTGATTTTGGGTCCAAAGGCATTCCTGCCTTTATGTATCATCATAGCATCTGCTAATAGCTTGTTTTTTCATCCTTTATTTTTTGAGTGTAAAAGTTGCAATTGACATGGTTTTGGATGTTATTAATGAGTTGTTGTTGAGAAGATGCGGTGTCCTACCTAAGAAAAGAGTAAAAAAAGTGGCCAACAAGATGCTGTGATGCACTGTGCATTCTGGGCTTGATTTGAATCAGTTGTTTGCCAGGTTTACTATTTTGAGGAAATTGTTCTATTTGGTTTGTGGAATTCTATAGATTTTGTTGTATTACACTACTCTAAAAAGTATTGAAGCCCTTCTAGATTGTTTCCTCGTTGTACTTTGTAGTCAAATTGAATCAAGGATGAAAAGAACCACAATAAAAATGGAAGGAGAGGGAGAGTGTACTAGTATATAACTTATCCATTAATAGTTAAACCATGGCCACGGATGTGACCAGCATTACATGACTATGGATGAAGAACAGAAGTAGATATTATTCGTAACACACCTCTAGCTAAGCACAGAGGTTTTGAACATAATAGGACACTTTTCAAACACAGCTACATTATTTCTGGCTTTATATAACTGTGTTAATGGAAACAACAGGTGTATATGTTCATTTGCCGCAGTGGCAGTCCTTGCAACTGCAGGGGTTGCAGCTGCACTTGTCATTGTGCTCGGCCGCTGGGACGTCCATGTCTATGGCGTCAAAGTAGCTTCAGAACCAAGAGATTCATTGTTAGATGCCAGGGAGGGCAACCAAGGACCACCTTGACAGACTTGATATATTAAGACAATTTCTGAGAGGGCAACAGAATCATAGCTTTGAGACAAGCAAGCTCTTGATGAGATTTGCTGCAAAGTTCGTAGGAAAACAAAGAAAAAAAAAAAAAAATACTTACACGCAGTTGCTGCTGTCGGAGCAGTCGCAGTTGCCGCACTTGCCTGACATGGTGAAGAAGCTAGAGAAGTTGTAGGAGAAGGAAAAACTGATAGCTTATGGAACTTTTTTTGGCTTATGATCTCTAAGTCTTGAGTATGGTTGTGTATTTATAGTGCAGGGCCATGGCGTTGGCATTGGCAAGGAGTGGCCGAGATGAATGCCAAGTATGGGAGAAGCACACGCCTCTTCTGAACTGTCCAAAAGAATTCGAATCATATAGGTCTGCCTTTCTATCCTTCTCTAATGTCAACTTCACTTTTCTTTTCTATTTTTCTTCTGTAAATTGGGAAATCTGGAAATAACCTTCTTAGTGCATTTGAAATTTGATCATATGCCCCTGAAATAGCTGGTTAGTGAAGTTCCTGTCTGCTTAATAGAATATCATGAAACTTTAGTTTGTTTGATTTCAAGATTCAAGCTTTGGCCTTAATTTGTTGATAATATCTTGAAGAATAATTTCTTCAAAATGTTATGAAACCCATCAAAATACATTCTGTCTTCTTTTTTCATTGCTATCATATCCAATCTCTTTTTCCTGCTTTTGAGAAGAAGTTGGATTCTACATGACATGGAATAGAATAGGAAAAAAAAGTGGTAACAGTGACATAGTTGAGGCTAAATTCAGCTCTTATTAACAACGACATAGACATAGTTAATTCAATTGATTTACGGTTCTAAGCTAGATTTGTTATATTTTTATCATGAAAGGAGGTGAAGATTGAT

Coding sequence (CDS)

ATGAGGCTTGACCTCGGAAACCATCCAACTTTGGCACTTATGTGGCCGTGTTCTCACATTACTATTCACAAAAGTTGGTTTGTCCAGGATCTTCGGCGTGCGGGGTTCGAAAGCTTTCAGGATTTCATTGCCTTTTCCTTAAGACTGCATTCCTTGAGAAATTGTGACATGGGTGGGCTACCTGTTGGAAATTCTTCGGAGTCCAAACTTGAGCAGGGATCAGCAGTGGTTAAGTCTACCCCAGATGGAAAACCAAAAAAGAAGATTTGTTGTGCCTGTCCTGATACTAAGAAGCTAAGAGATGAGTGCATTGTAGAACATGGTGAAGAATTCTGTGGTAAATGGATTGAGGCTCATCGTAAGTGTCTTCGTGCAGAGGGGTTCAACGTCTGA

Protein sequence

MRLDLGNHPTLALMWPCSHITIHKSWFVQDLRRAGFESFQDFIAFSLRLHSLRNCDMGGLPVGNSSESKLEQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEEFCGKWIEAHRKCLRAEGFNV

Homology

[Close]

BLAST of CmaCh04G009020 vs. Swiss-Prot
Match: CX171_ARATH (Cytochrome c oxidase copper chaperone 1 OS=Arabidopsis thaliana GN=COX17-1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.0e-19
Identity = 41/52 (78.85%), Postives = 46/52 (88.46%), Query Frame = 1


Query: 79  STPDGKPKKKICCACPDTKKLRDECIVEHGEEFCGKWIEAHRKCLRAEGFNV 131
           ++ + KPKK+ICCACPDTKKLRDECIVEHGE  C KWIEAH+ CLRAEGFNV
Sbjct: 23  ASAETKPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHKICLRAEGFNV 74

[Close]

BLAST of CmaCh04G009020 vs. Swiss-Prot
Match: CX172_ARATH (Cytochrome c oxidase copper chaperone 2 OS=Arabidopsis thaliana GN=COX17-2 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-18
Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 1


Query: 57  MGGLPVGNSSESKLEQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEEFCGKWI 116
           M GL   +S+ S L++ S  V +T + KPKK+ICCACPDTKKLRDECIVEHGE  C KWI
Sbjct: 1   MSGLQAQDSACS-LDKPSKDVVAT-ETKPKKRICCACPDTKKLRDECIVEHGESACTKWI 60

Query: 117 EAHRKCLRAEGFNV 131
           EAH  CLR+EGF V
Sbjct: 61  EAHILCLRSEGFKV 72

[Close]

BLAST of CmaCh04G009020 vs. Swiss-Prot
Match: COX17_DICDI (Cytochrome c oxidase copper chaperone OS=Dictyostelium discoideum GN=cox17 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-13
Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 1


Query: 79  STPDGKPKKKICCACPDTKKLRDECIVEHGEEFCGKWIEAHRKCLRAEGFNV 131
           +T    PKKK+CCACP+TKK+RDECIV +GEE C   IE H+ CLR EGF+V
Sbjct: 9   TTEVAAPKKKMCCACPETKKVRDECIVANGEEKCAALIELHKVCLRKEGFDV 60

[Close]

BLAST of CmaCh04G009020 vs. Swiss-Prot
Match: COX17_PIG (Cytochrome c oxidase copper chaperone OS=Sus scrofa GN=COX17 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.3e-13
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1


Query: 74  SAVVKSTPDGKPKK--KICCACPDTKKLRDECIVEHGEEFCGKWIEAHRKCLRAEGFNV 131
           +A + + P+ + KK  K CCACP+TKK RD CI+E GEE CG  IEAH++C+RA GF +
Sbjct: 4   AAAIPAPPESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 62

[Close]

BLAST of CmaCh04G009020 vs. Swiss-Prot
Match: COX17_MOUSE (Cytochrome c oxidase copper chaperone OS=Mus musculus GN=Cox17 PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-12
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 1


Query: 74  SAVVKSTPDGKPKK--KICCACPDTKKLRDECIVEHGEEFCGKWIEAHRKCLRAEGFNV 131
           +A   + P+ + KK  K CCACP+TKK RD CI+E GEE CG  IEAH++C+RA GF +
Sbjct: 5   AAASPAPPEAQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63

[Close]

BLAST of CmaCh04G009020 vs. TrEMBL
Match: A0A0A0L5D1_CUCSA (Cytochrome c oxidase copper chaperone OS=Cucumis sativus GN=Csa_3G105960 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-31
Identity = 68/80 (85.00%), Postives = 70/80 (87.50%), Query Frame = 1


Query: 57  MGGLPVGNSS------ESKLEQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 116
           MGGLPV NSS      ESKL+Q S V+KSTPDGKPKKKICCACPDTKKLRDECIVEHGEE
Sbjct: 1   MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60

Query: 117 FCGKWIEAHRKCLRAEGFNV 131
            CGKWIEAHRKCLRAEGFNV
Sbjct: 61  ACGKWIEAHRKCLRAEGFNV 80

[Close]

BLAST of CmaCh04G009020 vs. TrEMBL
Match: A0A061F8G8_THECC (Cytochrome C oxidase copper chaperone isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_031514 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.9e-24
Identity = 65/102 (63.73%), Postives = 73/102 (71.57%), Query Frame = 1


Query: 34  AGFESFQDFIAFSLRLHSLRNCDMGGLPVGNSSE-----SKLEQGSAVVKSTPDGKPKKK 93
           AGFES    + F++    L    MGGLP+ N+S      S+  Q SAV  S P+ KPKKK
Sbjct: 10  AGFES-PVCLKFNISYIDLLPGRMGGLPMQNTSALALPGSQQNQVSAVT-SGPESKPKKK 69

Query: 94  ICCACPDTKKLRDECIVEHGEEFCGKWIEAHRKCLRAEGFNV 131
           ICCACP+TKKLRDECIVEHGEE C KWIEAHRKCLRAEGFNV
Sbjct: 70  ICCACPETKKLRDECIVEHGEEACAKWIEAHRKCLRAEGFNV 109

[Close]

BLAST of CmaCh04G009020 vs. TrEMBL
Match: B9T0E6_RICCO (Cytochrome c oxidase copper chaperone, putative OS=Ricinus communis GN=RCOM_0507800 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.3e-24
Identity = 55/80 (68.75%), Postives = 63/80 (78.75%), Query Frame = 1


Query: 57  MGGLPVGNSSE------SKLEQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 116
           MGGLP+ ++S       S+  +GSA+  S P+ KPKKKICCACPDTKKLRDECIVEHGE 
Sbjct: 1   MGGLPLQSASSTLALSGSEQNKGSAITPSVPESKPKKKICCACPDTKKLRDECIVEHGES 60

Query: 117 FCGKWIEAHRKCLRAEGFNV 131
            C KWIEAHR+CLRAEGFNV
Sbjct: 61  ACAKWIEAHRQCLRAEGFNV 80

[Close]

BLAST of CmaCh04G009020 vs. TrEMBL
Match: A0A067JW50_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20993 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.6e-24
Identity = 55/80 (68.75%), Postives = 63/80 (78.75%), Query Frame = 1


Query: 57  MGGLPVGNSSE------SKLEQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 116
           MGGLP+ N+S       S+  +GSA+  S P+ KPKKKICCACP+TKKLRDECIVEHGE 
Sbjct: 1   MGGLPLQNASSTLALPGSEQNKGSAITTSLPETKPKKKICCACPETKKLRDECIVEHGES 60

Query: 117 FCGKWIEAHRKCLRAEGFNV 131
            C KWIEAHR+CLRAEGFNV
Sbjct: 61  ACAKWIEAHRQCLRAEGFNV 80

[Close]

BLAST of CmaCh04G009020 vs. TrEMBL
Match: V4ULF0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010072mg PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-23
Identity = 56/80 (70.00%), Postives = 62/80 (77.50%), Query Frame = 1


Query: 57  MGGLPVGNSSE------SKLEQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 116
           MGGLP+ ++S       S+  QG  V KS  + KPKKKICCACP+TKKLRDECIVEHGEE
Sbjct: 1   MGGLPLQDASSTLALPGSQPNQGLEVTKSGTESKPKKKICCACPETKKLRDECIVEHGEE 60

Query: 117 FCGKWIEAHRKCLRAEGFNV 131
            C KWIEAHRKCLRAEGFNV
Sbjct: 61  ACAKWIEAHRKCLRAEGFNV 80

[Close]

BLAST of CmaCh04G009020 vs. TAIR10
Match: AT3G15352.1 (AT3G15352.1 cytochrome c oxidase 17)

HSP 1 Score: 96.7 bits (239), Expect = 1.1e-20
Identity = 41/52 (78.85%), Postives = 46/52 (88.46%), Query Frame = 1


Query: 79  STPDGKPKKKICCACPDTKKLRDECIVEHGEEFCGKWIEAHRKCLRAEGFNV 131
           ++ + KPKK+ICCACPDTKKLRDECIVEHGE  C KWIEAH+ CLRAEGFNV
Sbjct: 23  ASAETKPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHKICLRAEGFNV 74

[Close]

BLAST of CmaCh04G009020 vs. TAIR10
Match: AT1G53030.1 (AT1G53030.1 Cytochrome C oxidase copper chaperone (COX17))

HSP 1 Score: 94.0 bits (232), Expect = 7.4e-20
Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 1


Query: 57  MGGLPVGNSSESKLEQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEEFCGKWI 116
           M GL   +S+ S L++ S  V +T + KPKK+ICCACPDTKKLRDECIVEHGE  C KWI
Sbjct: 1   MSGLQAQDSACS-LDKPSKDVVAT-ETKPKKRICCACPDTKKLRDECIVEHGESACTKWI 60

Query: 117 EAHRKCLRAEGFNV 131
           EAH  CLR+EGF V
Sbjct: 61  EAHILCLRSEGFKV 72

[Close]

BLAST of CmaCh04G009020 vs. NCBI nr
Match: gi|449431844|ref|XP_004133710.1| (PREDICTED: cytochrome c oxidase copper chaperone 2-like [Cucumis sativus])

HSP 1 Score: 142.9 bits (359), Expect = 3.9e-31
Identity = 68/80 (85.00%), Postives = 70/80 (87.50%), Query Frame = 1


Query: 57  MGGLPVGNSS------ESKLEQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 116
           MGGLPV NSS      ESKL+Q S V+KSTPDGKPKKKICCACPDTKKLRDECIVEHGEE
Sbjct: 1   MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60

Query: 117 FCGKWIEAHRKCLRAEGFNV 131
            CGKWIEAHRKCLRAEGFNV
Sbjct: 61  ACGKWIEAHRKCLRAEGFNV 80

[Close]

BLAST of CmaCh04G009020 vs. NCBI nr
Match: gi|659102681|ref|XP_008452259.1| (PREDICTED: LOW QUALITY PROTEIN: cytochrome c oxidase copper chaperone 2-like [Cucumis melo])

HSP 1 Score: 127.1 bits (318), Expect = 2.2e-26
Identity = 65/80 (81.25%), Postives = 66/80 (82.50%), Query Frame = 1


Query: 57  MGGLPVGNSS------ESKLEQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 116
           MGGLPV NSS      ESKL+Q S VVKS P  K KKKICCACPDTKKLRDECIVEHGEE
Sbjct: 1   MGGLPVVNSSSAIALPESKLDQASTVVKS-PRWKTKKKICCACPDTKKLRDECIVEHGEE 60

Query: 117 FCGKWIEAHRKCLRAEGFNV 131
            CGKWIEAHRKCLRAEGFNV
Sbjct: 61  ACGKWIEAHRKCLRAEGFNV 79

[Close]

BLAST of CmaCh04G009020 vs. NCBI nr
Match: gi|590609231|ref|XP_007021482.1| (Cytochrome C oxidase copper chaperone isoform 2, partial [Theobroma cacao])

HSP 1 Score: 120.2 bits (300), Expect = 2.7e-24
Identity = 65/102 (63.73%), Postives = 73/102 (71.57%), Query Frame = 1


Query: 34  AGFESFQDFIAFSLRLHSLRNCDMGGLPVGNSSE-----SKLEQGSAVVKSTPDGKPKKK 93
           AGFES    + F++    L    MGGLP+ N+S      S+  Q SAV  S P+ KPKKK
Sbjct: 10  AGFES-PVCLKFNISYIDLLPGRMGGLPMQNTSALALPGSQQNQVSAVT-SGPESKPKKK 69

Query: 94  ICCACPDTKKLRDECIVEHGEEFCGKWIEAHRKCLRAEGFNV 131
           ICCACP+TKKLRDECIVEHGEE C KWIEAHRKCLRAEGFNV
Sbjct: 70  ICCACPETKKLRDECIVEHGEEACAKWIEAHRKCLRAEGFNV 109

[Close]

BLAST of CmaCh04G009020 vs. NCBI nr
Match: gi|1000942083|ref|XP_015582429.1| (PREDICTED: cytochrome c oxidase copper chaperone 1 [Ricinus communis])

HSP 1 Score: 119.4 bits (298), Expect = 4.7e-24
Identity = 55/80 (68.75%), Postives = 63/80 (78.75%), Query Frame = 1


Query: 57  MGGLPVGNSSE------SKLEQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 116
           MGGLP+ ++S       S+  +GSA+  S P+ KPKKKICCACPDTKKLRDECIVEHGE 
Sbjct: 1   MGGLPLQSASSTLALSGSEQNKGSAITPSVPESKPKKKICCACPDTKKLRDECIVEHGES 60

Query: 117 FCGKWIEAHRKCLRAEGFNV 131
            C KWIEAHR+CLRAEGFNV
Sbjct: 61  ACAKWIEAHRQCLRAEGFNV 80

[Close]

BLAST of CmaCh04G009020 vs. NCBI nr
Match: gi|802716322|ref|XP_012084961.1| (PREDICTED: cytochrome c oxidase copper chaperone 1 [Jatropha curcas])

HSP 1 Score: 118.6 bits (296), Expect = 8.0e-24
Identity = 55/80 (68.75%), Postives = 63/80 (78.75%), Query Frame = 1


Query: 57  MGGLPVGNSSE------SKLEQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 116
           MGGLP+ N+S       S+  +GSA+  S P+ KPKKKICCACP+TKKLRDECIVEHGE 
Sbjct: 1   MGGLPLQNASSTLALPGSEQNKGSAITTSLPETKPKKKICCACPETKKLRDECIVEHGES 60

Query: 117 FCGKWIEAHRKCLRAEGFNV 131
            C KWIEAHR+CLRAEGFNV
Sbjct: 61  ACAKWIEAHRQCLRAEGFNV 80

The following BLAST results are available for this feature:

BLAST of CmaCh04G009020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CX171_ARATH	2.0e-19	78.85	Cytochrome c oxidase copper chaperone 1 OS=Arabidopsis thaliana GN=COX17-1 PE=2 ...	[more]
CX172_ARATH	1.3e-18	64.86	Cytochrome c oxidase copper chaperone 2 OS=Arabidopsis thaliana GN=COX17-2 PE=3 ...	[more]
COX17_DICDI	2.2e-13	63.46	Cytochrome c oxidase copper chaperone OS=Dictyostelium discoideum GN=cox17 PE=3 ...	[more]
COX17_PIG	8.3e-13	54.24	Cytochrome c oxidase copper chaperone OS=Sus scrofa GN=COX17 PE=1 SV=1	[more]
COX17_MOUSE	3.1e-12	54.24	Cytochrome c oxidase copper chaperone OS=Mus musculus GN=Cox17 PE=1 SV=2	[more]

BLAST of CmaCh04G009020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5D1_CUCSA	2.8e-31	85.00	Cytochrome c oxidase copper chaperone OS=Cucumis sativus GN=Csa_3G105960 PE=4 SV...	[more]
A0A061F8G8_THECC	1.9e-24	63.73	Cytochrome C oxidase copper chaperone isoform 2 (Fragment) OS=Theobroma cacao GN...	[more]
B9T0E6_RICCO	3.3e-24	68.75	Cytochrome c oxidase copper chaperone, putative OS=Ricinus communis GN=RCOM_0507...	[more]
A0A067JW50_JATCU	5.6e-24	68.75	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20993 PE=4 SV=1	[more]
V4ULF0_9ROSI	1.6e-23	70.00	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010072mg PE=4 SV=1	[more]

BLAST of CmaCh04G009020 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15352.1	1.1e-20	78.85	cytochrome c oxidase 17	[more]
AT1G53030.1	7.4e-20	64.86	Cytochrome C oxidase copper chaperone (COX17)	[more]

BLAST of CmaCh04G009020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449431844\|ref\|XP_004133710.1\|	3.9e-31	85.00	PREDICTED: cytochrome c oxidase copper chaperone 2-like [Cucumis sativus]	[more]
gi\|659102681\|ref\|XP_008452259.1\|	2.2e-26	81.25	PREDICTED: LOW QUALITY PROTEIN: cytochrome c oxidase copper chaperone 2-like [Cu...	[more]
gi\|590609231\|ref\|XP_007021482.1\|	2.7e-24	63.73	Cytochrome C oxidase copper chaperone isoform 2, partial [Theobroma cacao]	[more]
gi\|1000942083\|ref\|XP_015582429.1\|	4.7e-24	68.75	PREDICTED: cytochrome c oxidase copper chaperone 1 [Ricinus communis]	[more]
gi\|802716322\|ref\|XP_012084961.1\|	8.0e-24	68.75	PREDICTED: cytochrome c oxidase copper chaperone 1 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007745	Cyt_c_oxidase_Cu-chaperone
IPR009069	Cys_alpha_HP_mot_SF

Vocabulary: **Molecular Function**
Term	Definition
GO:0005507	copper ion binding
GO:0016531	copper chaperone activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005758	mitochondrial intermembrane space

Vocabulary: **Biological Process**
Term	Definition
GO:0006825	copper ion transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006825	copper ion transport
cellular_component	GO:0005758	mitochondrial intermembrane space
molecular_function	GO:0016531	copper chaperone activity
molecular_function	GO:0005507	copper ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G009020.1	CmaCh04G009020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007745	Cytochrome c oxidase copper chaperone	PRODOM	PD014904		coord: 84..130 score: 1.0
IPR007745	Cytochrome c oxidase copper chaperone	PANTHER	PTHR16719	CYTOCHROME C OXIDASE COPPER CHAPERONE	coord: 81..130 score: 6.4
IPR007745	Cytochrome c oxidase copper chaperone	PFAM	PF05051	COX17	coord: 86..130 score: 6.7
IPR009069	Cysteine alpha-hairpin motif superfamily	GENE3D	G3DSA:1.10.810.10		coord: 94..124 score: 3.
IPR009069	Cysteine alpha-hairpin motif superfamily	unknown	SSF47072	Cysteine alpha-hairpin motif	coord: 79..130 score: 7.06

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G009020	Cucsa.074780	Cucumber (Gy14) v1	cgycmaB0122
CmaCh04G009020	Cla011790	Watermelon (97103) v1	cmawmB680
CmaCh04G009020	Csa3G105960	Cucumber (Chinese Long) v2	cmacuB702
CmaCh04G009020	MELO3C016512	Melon (DHL92) v3.5.1	cmameB689
CmaCh04G009020	ClCG10G006950	Watermelon (Charleston Gray)	cmawcgB614
CmaCh04G009020	CSPI03G06190	Wild cucumber (PI 183967)	cmacpiB710
CmaCh04G009020	CmoCh04G009690	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G009020	Lsi05G007490	Bottle gourd (USVL1VR-Ls)	cmalsiB687
CmaCh04G009020	Cp4.1LG01g08580	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G009020	MELO3C016512.2	Melon (DHL92) v3.6.1	cmamedB778
CmaCh04G009020	CsaV3_3G006320	Cucumber (Chinese Long) v3	cmacucB0837
CmaCh04G009020	Cla97C10G190810	Watermelon (97103) v2	cmawmbB718
CmaCh04G009020	Bhi11G000656	Wax gourd	cmawgoB0823
CmaCh04G009020	CsGy3G006290	Cucumber (Gy14) v2	cgybcmaB416
CmaCh04G009020	Carg00020	Silver-seed gourd	carcmaB0948

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G009020	Silver-seed gourd	carcmaB0662
CmaCh04G009020	Wax gourd	cmawgoB0817
CmaCh04G009020	Wax gourd	cmawgoB0826
CmaCh04G009020	Cucurbita maxima (Rimu)	cmacmaB350
CmaCh04G009020	Cucurbita moschata (Rifu)	cmacmoB700
CmaCh04G009020	Watermelon (97103) v1	cmawmB659
CmaCh04G009020	Cucurbita pepo (Zucchini)	cmacpeB714
CmaCh04G009020	Bottle gourd (USVL1VR-Ls)	cmalsiB691