Cucsa.074780 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.074780
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Cytochrome c oxidase copper chaperone
Location	scaffold00785 : 650766 .. 653512 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGAAGCCCCTGCCTCCCGTTCAGCTGGCAGCTCCTGTCTTTCTTCCGCTCGTGCCGCCCCGGCCTCCGTTCAAGTGATTTTGCATTTATTTTCATCTCCCTTTGTTTCTGGTATTATCCCAATCTCCAGCTCCGTCTTTCTTCTCGCTTGAAAAGCATTAATTAGGATTTTCTCAATGAAAAAAAAAGTAAAAAATGGAGTGGTTGTTTGATTTTGTTTTCATAGCCTAATAACAACGCTATGTGGCAAATTGGAACGTGGGTCGTGTCTTGCTGTTCCGATTCTTTTGTGGGCGTGTCTCAATTTTCATTTGTTGTAATGTTTATAAGAGGGGGGATTGATTATTGTGTTTATGCTGATTTTATATGCTTTAACTACTGAACCCCATTTGTGATTGCTACCTAGAATTTGTTTGATAAAATGCTTCGTGAATTTGACGACTTCGGAAGAGAGAATTTATGCTGAAATTGTTGGAGAATTTATGATTCTGTGAAACTGTTTGATAAAACTCGTCGGAGCTACTCCAATTAGGTTCTCTCGTAATCAGTCAAATTGCCCCAATTTTCGTGGGCTCTGTTTATGATTGTGTTCCTGATTGAAAAATCAAGTTAGTCTACGTGGTCTTTTATTCTTTGAAATTTTTTCATTAGCTATCAAGCAAGGGACTCTAAACCCTTGGATTGTTTTTGCAAATCTATCATATGGGTTAATCAATTCTCTAACATGGGTTATTAACGTATTAGTACTTCGTCTCATGATATTTTTCGTCCACATCATCCTACCCAGTTCAGTTGTGTCTGGTGTTTTGTTGGTGAACGGTTTTGAAGAATTGAGTTCTTAGAATCAAGTCCTGTGCAATAGCAAGCTTATGCCTTAAAGTTTTGGAAGCACCCTTAAGCTTTATTCGTAGTTTTATTTGCTTTTGATGGTTCTCTAATTGAACTATGATGTAGTTTCCATTTATTGAACTTTGAAAATTTGATATTGAATTGCAAAATGATAAATTGTTGAAACGATACGGAGTTTGCTTTCCTGCAACAACTTCAGCATAAATTCTCTCTTCTGAAGTCATTTTTTAAATTGAGTGTTTTAGAGTTTATTTATTATTATTTTTTTGGCTCTGGCTTTTTCTTTTCTGTTTGTTCATTTGTCCTCTTGAAGTTGTTTGCTGTCAAAGTTTTATTTATTATTCATATATATCATTTTTAATGATAAACGGGTGAAGATTGTTGTTGTGACACTTCTGACACTTCACATTGCATCATTTTTTTCATTAGCTATCAAGCAAGTGATGACAGAAACATTAAGTTTTGTTAAAGATAGTGAAACTTCTTGCCATGGAAGGGAGATGGAAGAGGAGTGGGAAATTATTGCAATTTCTTATGTTTTGTTGTCTTTGTTATATGATTTGTGTTTCAAGATAATATCTAGTTTAAGTATTTGCAATTATACAAACATTTCTAGATTGAATGTGATATATGTTTTGAATTTTGTTTTATTTTTGTCATGCATATTTATTATTATTTTTATTTAGTTATATAAATTTTCAAATATAAAATATCCTATTTAGTAAGTTAGTAGTTCAAAATCACTTTTGGAATTAAACATTACAATTCGAAATCACTTCTAAATGTTTGAAAATCACTTAAAAAAATGTGGAACCAAACGTAGTTTAATTGCTAAAAAATATCAATGTTACAAAATCAATTGTATCTAAATTTCTTTTCCTAAAATCATAACTCCAACAATCACCCTCAAACATACTTTAAATCACCGGACAAAAGTGACCTTAAAAATTTCAAAATTTCTCAAATATGCACATAAAGGAACCTAAAGATTCTCCCTTTTGGCTAATTTTATCCGTAGTATAGATATAGAATTTCTTTGAATTGCTTTGATTAGACGCTGTCTAAAGCTCTATTCTTCCTTTTTTCTTCAACTATGGGTTTCTAGGGAATCGTCTGCCTGTAGGTTCAAAAAGTAAGCTTCCAATTTTTCTCTGCTTCTTGTTCACCCTACTGGTTTTCTCCGTTTCGCTGCCAGAATTTTTGCCTGTAAGAAAAATTTTCCGTTTTAGCAAACAAGATTGTTACTTTGTTTTCAGGTTCTTACTTTTGGCTCTATGGAATTTTATCTTTCCAGTATATCGGTTGTTTGATGAGAAATCAAATAGGAAGATCAGATGATTTATTTGTGGTATAGTTGAGTTGGGGTGTTTTGGATGTGTTTCATTGAAGGTCCTTGTCTTCTGTTTTCTTATTTGATGACTCTCTTCAAGTTCAAGTAAAATATGAAATTTGTAAATCTAAGCATATCTCAACTGGTTTCAATTAGTTTATGTACATAGAGAGGCACCACCCCCACTAGTTTATGATTCAGTAGCCCATTAAGTAAGATTTACCATGATATAATTTGATGTTCTTCATGATCATATTTTTCTGCTTGCAGTTTTCAGGATTTCCTTCCCTTTTTCTTAAGACTGCATTCCTTGAGAAATTGTGGCATGGGTGGTTTACCTGTTGTAAATTCTTCATCAGCCATAGCGTTGCCGGAATCGAAACTTGACCAAGCGTCAACAGTGATCAAGTCTACCCCAGATGGAAAACCAAAAAAGAAGATATGTTGTGCTTGTCCCGATACTAAGAAGCTTAGAGATGAGTGCATAGTGGAGCATGGTGAAGAAGCATGTGGAAAATGGATCGAGGCTCATCGTAAGTGTCTTCGGGCGGAAGGATTCAACGTCTGA

mRNA sequence

CCGAAGCCCCTGCCTCCCGTTCAGCTGGCAGCTCCTGTCTTTCTTCCGCTCGTGCCGCCCCGGCCTCCGTTCAAGTGATTTTGCATTTATTTTCATCTCCCTTTGTTTCTGTTTTCAGGATTTCCTTCCCTTTTTCTTAAGACTGCATTCCTTGAGAAATTGTGGCATGGGTGGTTTACCTGTTGTAAATTCTTCATCAGCCATAGCGTTGCCGGAATCGAAACTTGACCAAGCGTCAACAGTGATCAAGTCTACCCCAGATGGAAAACCAAAAAAGAAGATATGTTGTGCTTGTCCCGATACTAAGAAGCTTAGAGATGAGTGCATAGTGGAGCATGGTGAAGAAGCATGTGGAAAATGGATCGAGGCTCATCGTAAGTGTCTTCGGGCGGAAGGATTCAACGTCTGA

Coding sequence (CDS)

CCGAAGCCCCTGCCTCCCGTTCAGCTGGCAGCTCCTGTCTTTCTTCCGCTCGTGCCGCCCCGGCCTCCGTTCAAGTGATTTTGCATTTATTTTCATCTCCCTTTGTTTCTGTTTTCAGGATTTCCTTCCCTTTTTCTTAAGACTGCATTCCTTGAGAAATTGTGGCATGGGTGGTTTACCTGTTGTAAATTCTTCATCAGCCATAGCGTTGCCGGAATCGAAACTTGACCAAGCGTCAACAGTGATCAAGTCTACCCCAGATGGAAAACCAAAAAAGAAGATATGTTGTGCTTGTCCCGATACTAAGAAGCTTAGAGATGAGTGCATAGTGGAGCATGGTGAAGAAGCATGTGGAAAATGGATCGAGGCTCATCGTAAGTGTCTTCGGGCGGAAGGATTCAACGTCTGA

Protein sequence

RSPCLPFSWQLLSFFRSCRPGLRSSDFAFIFISLCFCFQDFLPFFLRLHSLRNCGMGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFNV*

Homology

[Close]

BLAST of Cucsa.074780 vs. Swiss-Prot
Match: CX171_ARATH (Cytochrome c oxidase copper chaperone 1 OS=Arabidopsis thaliana GN=COX17-1 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.3e-20
Identity = 42/52 (80.77%), Postives = 47/52 (90.38%), Query Frame = 1


Query: 84  STPDGKPKKKICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFNV 136
           ++ + KPKK+ICCACPDTKKLRDECIVEHGE AC KWIEAH+ CLRAEGFNV
Sbjct: 23  ASAETKPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHKICLRAEGFNV 74

[Close]

BLAST of Cucsa.074780 vs. Swiss-Prot
Match: CX172_ARATH (Cytochrome c oxidase copper chaperone 2 OS=Arabidopsis thaliana GN=COX17-2 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.7e-19
Identity = 44/61 (72.13%), Postives = 50/61 (81.97%), Query Frame = 1


Query: 75  LDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFN 134
           LD+ S  + +T + KPKK+ICCACPDTKKLRDECIVEHGE AC KWIEAH  CLR+EGF 
Sbjct: 13  LDKPSKDVVAT-ETKPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHILCLRSEGFK 72

Query: 135 V 136
           V
Sbjct: 73  V 72

[Close]

BLAST of Cucsa.074780 vs. Swiss-Prot
Match: COX17_DICDI (Cytochrome c oxidase copper chaperone OS=Dictyostelium discoideum GN=cox17 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-13
Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 1


Query: 84  STPDGKPKKKICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFNV 136
           +T    PKKK+CCACP+TKK+RDECIV +GEE C   IE H+ CLR EGF+V
Sbjct: 9   TTEVAAPKKKMCCACPETKKVRDECIVANGEEKCAALIELHKVCLRKEGFDV 60

[Close]

BLAST of Cucsa.074780 vs. Swiss-Prot
Match: COX17_PIG (Cytochrome c oxidase copper chaperone OS=Sus scrofa GN=COX17 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-12
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 1


Query: 79  STVIKSTPDGKPKK--KICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFNV 136
           +  I + P+ + KK  K CCACP+TKK RD CI+E GEE CG  IEAH++C+RA GF +
Sbjct: 4   AAAIPAPPESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 62

[Close]

BLAST of Cucsa.074780 vs. Swiss-Prot
Match: COX17_HUMAN (Cytochrome c oxidase copper chaperone OS=Homo sapiens GN=COX17 PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 7.3e-12
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 1


Query: 86  PDGKPKK--KICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFNV 136
           P+ + KK  K CCACP+TKK RD CI+E GEE CG  IEAH++C+RA GF +
Sbjct: 12  PESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63

[Close]

BLAST of Cucsa.074780 vs. TrEMBL
Match: A0A0A0L5D1_CUCSA (Cytochrome c oxidase copper chaperone OS=Cucumis sativus GN=Csa_3G105960 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-39
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1


Query: 56  MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 115
           MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE
Sbjct: 1   MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60

Query: 116 ACGKWIEAHRKCLRAEGFNV 136
           ACGKWIEAHRKCLRAEGFNV
Sbjct: 61  ACGKWIEAHRKCLRAEGFNV 80

[Close]

BLAST of Cucsa.074780 vs. TrEMBL
Match: A0A067F558_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045334mg PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.7e-28
Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 1


Query: 56  MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 115
           MGGLP+ ++SS +ALP S+ +Q   V KS  + KPKKKICCACP+TKKLRDECIVEHGEE
Sbjct: 1   MGGLPLQDASSTLALPGSQPNQGLEVTKSGTESKPKKKICCACPETKKLRDECIVEHGEE 60

Query: 116 ACGKWIEAHRKCLRAEGFNV 136
           AC KWIEAHRKCLRAEGFNV
Sbjct: 61  ACAKWIEAHRKCLRAEGFNV 80

[Close]

BLAST of Cucsa.074780 vs. TrEMBL
Match: V4ULF0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010072mg PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.7e-28
Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 1


Query: 56  MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 115
           MGGLP+ ++SS +ALP S+ +Q   V KS  + KPKKKICCACP+TKKLRDECIVEHGEE
Sbjct: 1   MGGLPLQDASSTLALPGSQPNQGLEVTKSGTESKPKKKICCACPETKKLRDECIVEHGEE 60

Query: 116 ACGKWIEAHRKCLRAEGFNV 136
           AC KWIEAHRKCLRAEGFNV
Sbjct: 61  ACAKWIEAHRKCLRAEGFNV 80

[Close]

BLAST of Cucsa.074780 vs. TrEMBL
Match: A0A067JW50_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20993 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.7e-28
Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 1


Query: 56  MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 115
           MGGLP+ N+SS +ALP S+ ++ S +  S P+ KPKKKICCACP+TKKLRDECIVEHGE 
Sbjct: 1   MGGLPLQNASSTLALPGSEQNKGSAITTSLPETKPKKKICCACPETKKLRDECIVEHGES 60

Query: 116 ACGKWIEAHRKCLRAEGFNV 136
           AC KWIEAHR+CLRAEGFNV
Sbjct: 61  ACAKWIEAHRQCLRAEGFNV 80

[Close]

BLAST of Cucsa.074780 vs. TrEMBL
Match: B9T0E6_RICCO (Cytochrome c oxidase copper chaperone, putative OS=Ricinus communis GN=RCOM_0507800 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.3e-27
Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 1


Query: 56  MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 115
           MGGLP+ ++SS +AL  S+ ++ S +  S P+ KPKKKICCACPDTKKLRDECIVEHGE 
Sbjct: 1   MGGLPLQSASSTLALSGSEQNKGSAITPSVPESKPKKKICCACPDTKKLRDECIVEHGES 60

Query: 116 ACGKWIEAHRKCLRAEGFNV 136
           AC KWIEAHR+CLRAEGFNV
Sbjct: 61  ACAKWIEAHRQCLRAEGFNV 80

[Close]

BLAST of Cucsa.074780 vs. TAIR10
Match: AT3G15352.1 (AT3G15352.1 cytochrome c oxidase 17)

HSP 1 Score: 99.0 bits (245), Expect = 2.4e-21
Identity = 42/52 (80.77%), Postives = 47/52 (90.38%), Query Frame = 1


Query: 84  STPDGKPKKKICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFNV 136
           ++ + KPKK+ICCACPDTKKLRDECIVEHGE AC KWIEAH+ CLRAEGFNV
Sbjct: 23  ASAETKPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHKICLRAEGFNV 74

[Close]

BLAST of Cucsa.074780 vs. TAIR10
Match: AT1G53030.1 (AT1G53030.1 Cytochrome C oxidase copper chaperone (COX17))

HSP 1 Score: 95.5 bits (236), Expect = 2.7e-20
Identity = 44/61 (72.13%), Postives = 50/61 (81.97%), Query Frame = 1


Query: 75  LDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFN 134
           LD+ S  + +T + KPKK+ICCACPDTKKLRDECIVEHGE AC KWIEAH  CLR+EGF 
Sbjct: 13  LDKPSKDVVAT-ETKPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHILCLRSEGFK 72

Query: 135 V 136
           V
Sbjct: 73  V 72

[Close]

BLAST of Cucsa.074780 vs. NCBI nr
Match: gi|449431844|ref|XP_004133710.1| (PREDICTED: cytochrome c oxidase copper chaperone 2-like [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 1.9e-39
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1


Query: 56  MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 115
           MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE
Sbjct: 1   MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60

Query: 116 ACGKWIEAHRKCLRAEGFNV 136
           ACGKWIEAHRKCLRAEGFNV
Sbjct: 61  ACGKWIEAHRKCLRAEGFNV 80

[Close]

BLAST of Cucsa.074780 vs. NCBI nr
Match: gi|659102681|ref|XP_008452259.1| (PREDICTED: LOW QUALITY PROTEIN: cytochrome c oxidase copper chaperone 2-like [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 1.4e-34
Identity = 75/80 (93.75%), Postives = 76/80 (95.00%), Query Frame = 1


Query: 56  MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 115
           MGGLPVVNSSSAIALPESKLDQASTV+KS P  K KKKICCACPDTKKLRDECIVEHGEE
Sbjct: 1   MGGLPVVNSSSAIALPESKLDQASTVVKS-PRWKTKKKICCACPDTKKLRDECIVEHGEE 60

Query: 116 ACGKWIEAHRKCLRAEGFNV 136
           ACGKWIEAHRKCLRAEGFNV
Sbjct: 61  ACGKWIEAHRKCLRAEGFNV 79

[Close]

BLAST of Cucsa.074780 vs. NCBI nr
Match: gi|802716322|ref|XP_012084961.1| (PREDICTED: cytochrome c oxidase copper chaperone 1 [Jatropha curcas])

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-27
Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 1


Query: 56  MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 115
           MGGLP+ N+SS +ALP S+ ++ S +  S P+ KPKKKICCACP+TKKLRDECIVEHGE 
Sbjct: 1   MGGLPLQNASSTLALPGSEQNKGSAITTSLPETKPKKKICCACPETKKLRDECIVEHGES 60

Query: 116 ACGKWIEAHRKCLRAEGFNV 136
           AC KWIEAHR+CLRAEGFNV
Sbjct: 61  ACAKWIEAHRQCLRAEGFNV 80

[Close]

BLAST of Cucsa.074780 vs. NCBI nr
Match: gi|567919698|ref|XP_006451855.1| (hypothetical protein CICLE_v10010072mg [Citrus clementina])

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-27
Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 1


Query: 56  MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 115
           MGGLP+ ++SS +ALP S+ +Q   V KS  + KPKKKICCACP+TKKLRDECIVEHGEE
Sbjct: 1   MGGLPLQDASSTLALPGSQPNQGLEVTKSGTESKPKKKICCACPETKKLRDECIVEHGEE 60

Query: 116 ACGKWIEAHRKCLRAEGFNV 136
           AC KWIEAHRKCLRAEGFNV
Sbjct: 61  ACAKWIEAHRKCLRAEGFNV 80

[Close]

BLAST of Cucsa.074780 vs. NCBI nr
Match: gi|747071596|ref|XP_011082676.1| (PREDICTED: cytochrome c oxidase copper chaperone 1 [Sesamum indicum])

HSP 1 Score: 130.2 bits (326), Expect = 2.8e-27
Identity = 60/80 (75.00%), Postives = 64/80 (80.00%), Query Frame = 1


Query: 56  MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 115
           MGGL + NSSS ++L   K  Q ST + S PD KPKKKICCACPDTKKLRDECIVEHGE 
Sbjct: 1   MGGLSIQNSSSIVSLQSQKDQQGSTAVTSAPDSKPKKKICCACPDTKKLRDECIVEHGES 60

Query: 116 ACGKWIEAHRKCLRAEGFNV 136
           AC KWIEAHRK LRAEGFNV
Sbjct: 61  ACEKWIEAHRKFLRAEGFNV 80

The following BLAST results are available for this feature:

BLAST of Cucsa.074780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CX171_ARATH	4.3e-20	80.77	Cytochrome c oxidase copper chaperone 1 OS=Arabidopsis thaliana GN=COX17-1 PE=2 ...	[more]
CX172_ARATH	4.7e-19	72.13	Cytochrome c oxidase copper chaperone 2 OS=Arabidopsis thaliana GN=COX17-2 PE=3 ...	[more]
COX17_DICDI	1.3e-13	63.46	Cytochrome c oxidase copper chaperone OS=Dictyostelium discoideum GN=cox17 PE=3 ...	[more]
COX17_PIG	2.5e-12	54.24	Cytochrome c oxidase copper chaperone OS=Sus scrofa GN=COX17 PE=1 SV=1	[more]
COX17_HUMAN	7.3e-12	59.62	Cytochrome c oxidase copper chaperone OS=Homo sapiens GN=COX17 PE=1 SV=2	[more]

BLAST of Cucsa.074780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5D1_CUCSA	1.3e-39	100.00	Cytochrome c oxidase copper chaperone OS=Cucumis sativus GN=Csa_3G105960 PE=4 SV...	[more]
A0A067F558_CITSI	8.7e-28	75.00	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045334mg PE=4 SV=1	[more]
V4ULF0_9ROSI	8.7e-28	75.00	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010072mg PE=4 SV=1	[more]
A0A067JW50_JATCU	8.7e-28	72.50	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20993 PE=4 SV=1	[more]
B9T0E6_RICCO	4.3e-27	71.25	Cytochrome c oxidase copper chaperone, putative OS=Ricinus communis GN=RCOM_0507...	[more]

BLAST of Cucsa.074780 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15352.1	2.4e-21	80.77	cytochrome c oxidase 17	[more]
AT1G53030.1	2.7e-20	72.13	Cytochrome C oxidase copper chaperone (COX17)	[more]

BLAST of Cucsa.074780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449431844\|ref\|XP_004133710.1\|	1.9e-39	100.00	PREDICTED: cytochrome c oxidase copper chaperone 2-like [Cucumis sativus]	[more]
gi\|659102681\|ref\|XP_008452259.1\|	1.4e-34	93.75	PREDICTED: LOW QUALITY PROTEIN: cytochrome c oxidase copper chaperone 2-like [Cu...	[more]
gi\|802716322\|ref\|XP_012084961.1\|	1.2e-27	72.50	PREDICTED: cytochrome c oxidase copper chaperone 1 [Jatropha curcas]	[more]
gi\|567919698\|ref\|XP_006451855.1\|	1.2e-27	75.00	hypothetical protein CICLE_v10010072mg [Citrus clementina]	[more]
gi\|747071596\|ref\|XP_011082676.1\|	2.8e-27	75.00	PREDICTED: cytochrome c oxidase copper chaperone 1 [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007745	Cyt_c_oxidase_Cu-chaperone
IPR009069	Cys_alpha_HP_mot_SF

Vocabulary: **Molecular Function**
Term	Definition
GO:0005507	copper ion binding
GO:0016531	copper chaperone activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005758	mitochondrial intermembrane space

Vocabulary: **Biological Process**
Term	Definition
GO:0006825	copper ion transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006825	copper ion transport
cellular_component	GO:0005758	mitochondrial intermembrane space
molecular_function	GO:0016531	copper chaperone activity
molecular_function	GO:0005507	copper ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.074780.1	Cucsa.074780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007745	Cytochrome c oxidase copper chaperone	PRODOM	PD014904		coord: 89..135 score: 2.0
IPR007745	Cytochrome c oxidase copper chaperone	PANTHER	PTHR16719	CYTOCHROME C OXIDASE COPPER CHAPERONE	coord: 63..135 score: 1.7
IPR007745	Cytochrome c oxidase copper chaperone	PFAM	PF05051	COX17	coord: 91..135 score: 1.4
IPR009069	Cysteine alpha-hairpin motif superfamily	GENE3D	G3DSA:1.10.810.10		coord: 99..129 score: 5.
IPR009069	Cysteine alpha-hairpin motif superfamily	unknown	SSF47072	Cysteine alpha-hairpin motif	coord: 83..135 score: 2.04

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.074780	Cla011790	Watermelon (97103) v1	cgywmB077
Cucsa.074780	Csa3G105960	Cucumber (Chinese Long) v2	cgycuB071
Cucsa.074780	MELO3C016512	Melon (DHL92) v3.5.1	cgymeB076
Cucsa.074780	ClCG10G006950	Watermelon (Charleston Gray)	cgywcgB074
Cucsa.074780	CSPI03G06190	Wild cucumber (PI 183967)	cgycpiB072
Cucsa.074780	CmaCh04G009020	Cucurbita maxima (Rimu)	cgycmaB0122
Cucsa.074780	CmoCh04G009690	Cucurbita moschata (Rifu)	cgycmoB0118
Cucsa.074780	Lsi05G007490	Bottle gourd (USVL1VR-Ls)	cgylsiB075
Cucsa.074780	Cp4.1LG01g08580	Cucurbita pepo (Zucchini)	cgycpeB0119
Cucsa.074780	MELO3C016512.2	Melon (DHL92) v3.6.1	cgymedB075
Cucsa.074780	CsaV3_3G006320	Cucumber (Chinese Long) v3	cgycucB074
Cucsa.074780	Cla97C10G190810	Watermelon (97103) v2	cgywmbB070
Cucsa.074780	Bhi11G000656	Wax gourd	cgywgoB081
Cucsa.074780	Carg00020	Silver-seed gourd	carcgyB0740

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.074780	Cucurbita maxima (Rimu)	cgycmaB0121
Cucsa.074780	Cucurbita moschata (Rifu)	cgycmoB0117
Cucsa.074780	Cucurbita pepo (Zucchini)	cgycpeB0118
Cucsa.074780	Bottle gourd (USVL1VR-Ls)	cgylsiB074
Cucsa.074780	Silver-seed gourd	carcgyB0545