Lsi05G007490 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G007490
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCytochrome c oxidase copper chaperone
Locationchr05 : 10370076 .. 10371679 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCACTCCAAGTAATCTAGGGCAATTCTCTTTTAATTCCTAGCTTTTAGGAGTTATTTTTTTATTTGTGGAACAGCTTCAACCATATTTATATTTGTAGATTTAGTTGGGGACAAGGCAATGAGTTCCTTTTTTTCCACATTGTTCTCTCCTTCAGATTAACCAATACAATAACTAATCATACTTTGAATTTACTGAAAATAGCTGTCTATATGCTTTGTATTTCTAGATAATGTTGAGGGTATTAAATGTTTTAAAACATGGATGACTTAAAGGAACCTAAAGATTCTCCCTTTTAGCTACTTTTATATGGAGTATAGATATAGAATTCTTTGAATTGCTTTGATTAGACGCTGTCTAAAGCCCCATTTTAGACGATCTTCCGACTGCGGGTTCGAAAGGTAAGCTTCCAATTTTTCTCTGCTTCTTTGTCTCCCTACAGTTTTTTTCCATTTCGCTGCGAGAATTTTCGCCTTTTGTAAGATTTTTTTCCCCTTTTTAGCAAGGAAGATTGTTACTCTGTTTTCATGTTCTTACTGTTGGTTCTATGGAATTTTATCTTTCCAGTTTATCGGTTGTTTGATGGGAAGTCGAGTAGGTTTTAGATCCGATGATTTTTTTCTGGGATAGTTGAGTTGGGGTGTTATGAATGTGTTTCATTGAAGGTCTTGTCTTCTGTTTTCTTATTTGATGAGTGATGACTCTCTTCAACTGCAAGTAAAGAATGAAATTTATCAATCTGAGCATCGTTCAACTGATTTAGGTGCCCTCAATTGAGAGGCTAGAGATTCGAATCTATCACCTCCACTTGTTGTAATTGAGCTCAAAAGTAAAGATTGAAATTCATTTTATGTAGACTTTAATGATTCAGTAGCCCATTAAGCAAGATTTTACTATGATCTAATTTGATGATCTTTCATGATCGTGTTTTTTCTGCTTGCAGTTTTCAGGATTTCCTTCCTTTTTTCTCAAGACTGCATTCCTTGAGAAACTGTGACATGGGTGGTCTACCTGTTGTAAACTCTTCATCGACCATAGCTTTGCCGGAATCGAAACTTGACCAAGGGTCAGCAGTTGTCAAGTCTACCCCAGATGGAAAACCAAAAAAGAAGATCTGTTGTGCCTGCCCTGATACTAAGAAGCTAAGAGATGAGTGCATTGTGGAGCATGGTGAAGAAGCGTGTGGAAAATGGATTGAGGCTCATCGTAAGTGTCTTCGTGCGGAAGGATTCAATGTCTGAACTTGATAACCTAATAAAATGAAAGATTTGATTTTCTTTTAGTTTACAGTTTAACTATTTGAGGGATACAGATACCAGAGAAAATTGAGAAATAAAGTGAGAGAGAAGAGGAGGTATAGCCAAAGCTGCAGTGCAGTAAGTTCAATTTGGCTGTGTATTTTTGTAGGCTTGGGTCTTTCTTATTGACTTACTGTATTAATTTCCTCATGTTATTCAAAATTTCTCACTATTTCTTCTTTATTTAGATACCCATTGGATTTTTGTACTATGCATCAATATCATGTGTTCTAAAGATTTGATTCTCGAATTGGTGGATTCGAAGTTTTGAATCTGAGAGCTTGTAGTAGTAGACTTAGAGTGAAAA

mRNA sequence

ATCACTCCAAGTAATCTAGGGCAATTCTCTTTTAATTCCTAGCTTTTAGGAGTTATTTTTTTATTTGTGGAACAGCTTCAACCATATTTATATTTGTAGATTTAGTTGGGGACAAGGCAATGAGTTCCTTTTTTTCCACATTGTTCTCTCCTTCAGATTAACCAATACAATAACTAATCATACTTTGAATTTACTGAAAATAGCTGTCTATATGCTTTGTATTTCTAGATAATGTTGAGGGTATTAAATGTTTTAAAACATGGATGACTTAAAGGAACCTAAAGATTCTCCCTTTTAGCTACTTTTATATGGAGTATAGATATAGAATTCTTTGAATTGCTTTGATTAGACGCTGTCTAAAGCCCCATTTTAGACGATCTTCCGACTGCGGGTTCGAAAGTTTTCAGGATTTCCTTCCTTTTTTCTCAAGACTGCATTCCTTGAGAAACTGTGACATGGGTGGTCTACCTGTTGTAAACTCTTCATCGACCATAGCTTTGCCGGAATCGAAACTTGACCAAGGGTCAGCAGTTGTCAAGTCTACCCCAGATGGAAAACCAAAAAAGAAGATCTGTTGTGCCTGCCCTGATACTAAGAAGCTAAGAGATGAGTGCATTGTGGAGCATGGTGAAGAAGCGTGTGGAAAATGGATTGAGGCTCATCGTAAGTGTCTTCGTGCGGAAGGATTCAATGTCTGAACTTGATAACCTAATAAAATGAAAGATTTGATTTTCTTTTAGTTTACAGTTTAACTATTTGAGGGATACAGATACCAGAGAAAATTGAGAAATAAAGTGAGAGAGAAGAGGAGGTATAGCCAAAGCTGCAGTGCAGTAAGTTCAATTTGGCTGTGTATTTTTGTAGGCTTGGGTCTTTCTTATTGACTTACTGTATTAATTTCCTCATGTTATTCAAAATTTCTCACTATTTCTTCTTTATTTAGATACCCATTGGATTTTTGTACTATGCATCAATATCATGTGTTCTAAAGATTTGATTCTCGAATTGGTGGATTCGAAGTTTTGAATCTGAGAGCTTGTAGTAGTAGACTTAGAGTGAAAA

Coding sequence (CDS)

ATGGGTGGTCTACCTGTTGTAAACTCTTCATCGACCATAGCTTTGCCGGAATCGAAACTTGACCAAGGGTCAGCAGTTGTCAAGTCTACCCCAGATGGAAAACCAAAAAAGAAGATCTGTTGTGCCTGCCCTGATACTAAGAAGCTAAGAGATGAGTGCATTGTGGAGCATGGTGAAGAAGCGTGTGGAAAATGGATTGAGGCTCATCGTAAGTGTCTTCGTGCGGAAGGATTCAATGTCTGA

Protein sequence

MGGLPVVNSSSTIALPESKLDQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFNV
Homology
[Close]
BLAST of Lsi05G007490 vs. Swiss-Prot
Match: CX171_ARATH (Cytochrome c oxidase copper chaperone 1 OS=Arabidopsis thaliana GN=COX17-1 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.3e-20
Identity = 42/52 (80.77%), Postives = 47/52 (90.38%), Query Frame = 1 

Query: 29 STPDGKPKKKICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFNV 81
          ++ + KPKK+ICCACPDTKKLRDECIVEHGE AC KWIEAH+ CLRAEGFNV
Sbjct: 23 ASAETKPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHKICLRAEGFNV 74

[Close]
BLAST of Lsi05G007490 vs. Swiss-Prot
Match: CX172_ARATH (Cytochrome c oxidase copper chaperone 2 OS=Arabidopsis thaliana GN=COX17-2 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.6e-19
Identity = 45/61 (73.77%), Postives = 50/61 (81.97%), Query Frame = 1 

Query: 20 LDQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFN 79
          LD+ S  V +T + KPKK+ICCACPDTKKLRDECIVEHGE AC KWIEAH  CLR+EGF 
Sbjct: 13 LDKPSKDVVAT-ETKPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHILCLRSEGFK 72

Query: 80 V 81
          V
Sbjct: 73 V 72

[Close]
BLAST of Lsi05G007490 vs. Swiss-Prot
Match: COX17_DICDI (Cytochrome c oxidase copper chaperone OS=Dictyostelium discoideum GN=cox17 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-13
Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 1 

Query: 29 STPDGKPKKKICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFNV 81
          +T    PKKK+CCACP+TKK+RDECIV +GEE C   IE H+ CLR EGF+V
Sbjct: 9  TTEVAAPKKKMCCACPETKKVRDECIVANGEEKCAALIELHKVCLRKEGFDV 60

[Close]
BLAST of Lsi05G007490 vs. Swiss-Prot
Match: COX17_PIG (Cytochrome c oxidase copper chaperone OS=Sus scrofa GN=COX17 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-12
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1 

Query: 24 SAVVKSTPDGKPKK--KICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFNV 81
          +A + + P+ + KK  K CCACP+TKK RD CI+E GEE CG  IEAH++C+RA GF +
Sbjct: 4  AAAIPAPPESQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 62

[Close]
BLAST of Lsi05G007490 vs. Swiss-Prot
Match: COX17_MOUSE (Cytochrome c oxidase copper chaperone OS=Mus musculus GN=Cox17 PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 4.3e-12
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 1 

Query: 24 SAVVKSTPDGKPKK--KICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFNV 81
          +A   + P+ + KK  K CCACP+TKK RD CI+E GEE CG  IEAH++C+RA GF +
Sbjct: 5  AAASPAPPEAQEKKPLKPCCACPETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63

[Close]
BLAST of Lsi05G007490 vs. TrEMBL
Match: A0A0A0L5D1_CUCSA (Cytochrome c oxidase copper chaperone OS=Cucumis sativus GN=Csa_3G105960 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 9.3e-38
Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 1 

Query: 1  MGGLPVVNSSSTIALPESKLDQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60
          MGGLPVVNSSS IALPESKLDQ S V+KSTPDGKPKKKICCACPDTKKLRDECIVEHGEE
Sbjct: 1  MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60

Query: 61 ACGKWIEAHRKCLRAEGFNV 81
          ACGKWIEAHRKCLRAEGFNV
Sbjct: 61 ACGKWIEAHRKCLRAEGFNV 80

[Close]
BLAST of Lsi05G007490 vs. TrEMBL
Match: A0A067JW50_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20993 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.1e-29
Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 1 

Query: 1  MGGLPVVNSSSTIALPESKLDQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60
          MGGLP+ N+SST+ALP S+ ++GSA+  S P+ KPKKKICCACP+TKKLRDECIVEHGE 
Sbjct: 1  MGGLPLQNASSTLALPGSEQNKGSAITTSLPETKPKKKICCACPETKKLRDECIVEHGES 60

Query: 61 ACGKWIEAHRKCLRAEGFNV 81
          AC KWIEAHR+CLRAEGFNV
Sbjct: 61 ACAKWIEAHRQCLRAEGFNV 80

[Close]
BLAST of Lsi05G007490 vs. TrEMBL
Match: V4ULF0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010072mg PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 6.0e-29
Identity = 62/80 (77.50%), Postives = 70/80 (87.50%), Query Frame = 1 

Query: 1  MGGLPVVNSSSTIALPESKLDQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60
          MGGLP+ ++SST+ALP S+ +QG  V KS  + KPKKKICCACP+TKKLRDECIVEHGEE
Sbjct: 1  MGGLPLQDASSTLALPGSQPNQGLEVTKSGTESKPKKKICCACPETKKLRDECIVEHGEE 60

Query: 61 ACGKWIEAHRKCLRAEGFNV 81
          AC KWIEAHRKCLRAEGFNV
Sbjct: 61 ACAKWIEAHRKCLRAEGFNV 80

[Close]
BLAST of Lsi05G007490 vs. TrEMBL
Match: A0A067F558_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045334mg PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 6.0e-29
Identity = 62/80 (77.50%), Postives = 70/80 (87.50%), Query Frame = 1 

Query: 1  MGGLPVVNSSSTIALPESKLDQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60
          MGGLP+ ++SST+ALP S+ +QG  V KS  + KPKKKICCACP+TKKLRDECIVEHGEE
Sbjct: 1  MGGLPLQDASSTLALPGSQPNQGLEVTKSGTESKPKKKICCACPETKKLRDECIVEHGEE 60

Query: 61 ACGKWIEAHRKCLRAEGFNV 81
          AC KWIEAHRKCLRAEGFNV
Sbjct: 61 ACAKWIEAHRKCLRAEGFNV 80

[Close]
BLAST of Lsi05G007490 vs. TrEMBL
Match: B9T0E6_RICCO (Cytochrome c oxidase copper chaperone, putative OS=Ricinus communis GN=RCOM_0507800 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-28
Identity = 60/80 (75.00%), Postives = 70/80 (87.50%), Query Frame = 1 

Query: 1  MGGLPVVNSSSTIALPESKLDQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60
          MGGLP+ ++SST+AL  S+ ++GSA+  S P+ KPKKKICCACPDTKKLRDECIVEHGE 
Sbjct: 1  MGGLPLQSASSTLALSGSEQNKGSAITPSVPESKPKKKICCACPDTKKLRDECIVEHGES 60

Query: 61 ACGKWIEAHRKCLRAEGFNV 81
          AC KWIEAHR+CLRAEGFNV
Sbjct: 61 ACAKWIEAHRQCLRAEGFNV 80

[Close]
BLAST of Lsi05G007490 vs. TAIR10
Match: AT3G15352.1 (AT3G15352.1 cytochrome c oxidase 17)

HSP 1 Score: 98.2 bits (243), Expect = 2.4e-21
Identity = 42/52 (80.77%), Postives = 47/52 (90.38%), Query Frame = 1 

Query: 29 STPDGKPKKKICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFNV 81
          ++ + KPKK+ICCACPDTKKLRDECIVEHGE AC KWIEAH+ CLRAEGFNV
Sbjct: 23 ASAETKPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHKICLRAEGFNV 74

[Close]
BLAST of Lsi05G007490 vs. TAIR10
Match: AT1G53030.1 (AT1G53030.1 Cytochrome C oxidase copper chaperone (COX17))

HSP 1 Score: 95.1 bits (235), Expect = 2.0e-20
Identity = 45/61 (73.77%), Postives = 50/61 (81.97%), Query Frame = 1 

Query: 20 LDQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEEACGKWIEAHRKCLRAEGFN 79
          LD+ S  V +T + KPKK+ICCACPDTKKLRDECIVEHGE AC KWIEAH  CLR+EGF 
Sbjct: 13 LDKPSKDVVAT-ETKPKKRICCACPDTKKLRDECIVEHGESACTKWIEAHILCLRSEGFK 72

Query: 80 V 81
          V
Sbjct: 73 V 72

[Close]
BLAST of Lsi05G007490 vs. NCBI nr
Match: gi|449431844|ref|XP_004133710.1| (PREDICTED: cytochrome c oxidase copper chaperone 2-like [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-37
Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 1 

Query: 1  MGGLPVVNSSSTIALPESKLDQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60
          MGGLPVVNSSS IALPESKLDQ S V+KSTPDGKPKKKICCACPDTKKLRDECIVEHGEE
Sbjct: 1  MGGLPVVNSSSAIALPESKLDQASTVIKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60

Query: 61 ACGKWIEAHRKCLRAEGFNV 81
          ACGKWIEAHRKCLRAEGFNV
Sbjct: 61 ACGKWIEAHRKCLRAEGFNV 80

[Close]
BLAST of Lsi05G007490 vs. NCBI nr
Match: gi|659102681|ref|XP_008452259.1| (PREDICTED: LOW QUALITY PROTEIN: cytochrome c oxidase copper chaperone 2-like [Cucumis melo])

HSP 1 Score: 148.3 bits (373), Expect = 5.8e-33
Identity = 73/80 (91.25%), Postives = 73/80 (91.25%), Query Frame = 1 

Query: 1  MGGLPVVNSSSTIALPESKLDQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60
          MGGLPVVNSSS IALPESKLDQ S VVKS P  K KKKICCACPDTKKLRDECIVEHGEE
Sbjct: 1  MGGLPVVNSSSAIALPESKLDQASTVVKS-PRWKTKKKICCACPDTKKLRDECIVEHGEE 60

Query: 61 ACGKWIEAHRKCLRAEGFNV 81
          ACGKWIEAHRKCLRAEGFNV
Sbjct: 61 ACGKWIEAHRKCLRAEGFNV 79

[Close]
BLAST of Lsi05G007490 vs. NCBI nr
Match: gi|802716322|ref|XP_012084961.1| (PREDICTED: cytochrome c oxidase copper chaperone 1 [Jatropha curcas])

HSP 1 Score: 136.0 bits (341), Expect = 3.0e-29
Identity = 61/80 (76.25%), Postives = 71/80 (88.75%), Query Frame = 1 

Query: 1  MGGLPVVNSSSTIALPESKLDQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60
          MGGLP+ N+SST+ALP S+ ++GSA+  S P+ KPKKKICCACP+TKKLRDECIVEHGE 
Sbjct: 1  MGGLPLQNASSTLALPGSEQNKGSAITTSLPETKPKKKICCACPETKKLRDECIVEHGES 60

Query: 61 ACGKWIEAHRKCLRAEGFNV 81
          AC KWIEAHR+CLRAEGFNV
Sbjct: 61 ACAKWIEAHRQCLRAEGFNV 80

[Close]
BLAST of Lsi05G007490 vs. NCBI nr
Match: gi|567919698|ref|XP_006451855.1| (hypothetical protein CICLE_v10010072mg [Citrus clementina])

HSP 1 Score: 134.4 bits (337), Expect = 8.6e-29
Identity = 62/80 (77.50%), Postives = 70/80 (87.50%), Query Frame = 1 

Query: 1  MGGLPVVNSSSTIALPESKLDQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60
          MGGLP+ ++SST+ALP S+ +QG  V KS  + KPKKKICCACP+TKKLRDECIVEHGEE
Sbjct: 1  MGGLPLQDASSTLALPGSQPNQGLEVTKSGTESKPKKKICCACPETKKLRDECIVEHGEE 60

Query: 61 ACGKWIEAHRKCLRAEGFNV 81
          AC KWIEAHRKCLRAEGFNV
Sbjct: 61 ACAKWIEAHRKCLRAEGFNV 80

[Close]
BLAST of Lsi05G007490 vs. NCBI nr
Match: gi|1000942083|ref|XP_015582429.1| (PREDICTED: cytochrome c oxidase copper chaperone 1 [Ricinus communis])

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-28
Identity = 60/80 (75.00%), Postives = 70/80 (87.50%), Query Frame = 1 

Query: 1  MGGLPVVNSSSTIALPESKLDQGSAVVKSTPDGKPKKKICCACPDTKKLRDECIVEHGEE 60
          MGGLP+ ++SST+AL  S+ ++GSA+  S P+ KPKKKICCACPDTKKLRDECIVEHGE 
Sbjct: 1  MGGLPLQSASSTLALSGSEQNKGSAITPSVPESKPKKKICCACPDTKKLRDECIVEHGES 60

Query: 61 ACGKWIEAHRKCLRAEGFNV 81
          AC KWIEAHR+CLRAEGFNV
Sbjct: 61 ACAKWIEAHRQCLRAEGFNV 80

The following BLAST results are available for this feature:
BLAST of Lsi05G007490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CX171_ARATH4.3e-2080.77Cytochrome c oxidase copper chaperone 1 OS=Arabidopsis thaliana GN=COX17-1 PE=2 ... [more]
CX172_ARATH3.6e-1973.77Cytochrome c oxidase copper chaperone 2 OS=Arabidopsis thaliana GN=COX17-2 PE=3 ... [more]
COX17_DICDI1.3e-1363.46Cytochrome c oxidase copper chaperone OS=Dictyostelium discoideum GN=cox17 PE=3 ... [more]
COX17_PIG1.1e-1254.24Cytochrome c oxidase copper chaperone OS=Sus scrofa GN=COX17 PE=1 SV=1[more]
COX17_MOUSE4.3e-1254.24Cytochrome c oxidase copper chaperone OS=Mus musculus GN=Cox17 PE=1 SV=2[more]
BLAST of Lsi05G007490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5D1_CUCSA9.3e-3895.00Cytochrome c oxidase copper chaperone OS=Cucumis sativus GN=Csa_3G105960 PE=4 SV... [more]
A0A067JW50_JATCU2.1e-2976.25Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20993 PE=4 SV=1[more]
V4ULF0_9ROSI6.0e-2977.50Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010072mg PE=4 SV=1[more]
A0A067F558_CITSI6.0e-2977.50Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045334mg PE=4 SV=1[more]
B9T0E6_RICCO1.0e-2875.00Cytochrome c oxidase copper chaperone, putative OS=Ricinus communis GN=RCOM_0507... [more]
BLAST of Lsi05G007490 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15352.12.4e-2180.77 cytochrome c oxidase 17[more]
AT1G53030.12.0e-2073.77 Cytochrome C oxidase copper chaperone (COX17)[more]
BLAST of Lsi05G007490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449431844|ref|XP_004133710.1|1.3e-3795.00PREDICTED: cytochrome c oxidase copper chaperone 2-like [Cucumis sativus][more]
gi|659102681|ref|XP_008452259.1|5.8e-3391.25PREDICTED: LOW QUALITY PROTEIN: cytochrome c oxidase copper chaperone 2-like [Cu... [more]
gi|802716322|ref|XP_012084961.1|3.0e-2976.25PREDICTED: cytochrome c oxidase copper chaperone 1 [Jatropha curcas][more]
gi|567919698|ref|XP_006451855.1|8.6e-2977.50hypothetical protein CICLE_v10010072mg [Citrus clementina][more]
gi|1000942083|ref|XP_015582429.1|1.5e-2875.00PREDICTED: cytochrome c oxidase copper chaperone 1 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016531copper chaperone activity
GO:0005507copper ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006825copper ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0005758mitochondrial intermembrane space
Vocabulary: INTERPRO
TermDefinition
IPR009069Cys_alpha_HP_mot_SF
IPR007745Cyt_c_oxidase_Cu-chaperone
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006825 copper ion transport
cellular_component GO:0005758 mitochondrial intermembrane space
molecular_function GO:0016531 copper chaperone activity
molecular_function GO:0005507 copper ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G007490.1Lsi05G007490.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007745Cytochrome c oxidase copper chaperonePRODOMPD014904coord: 34..80
score: 2.0
IPR007745Cytochrome c oxidase copper chaperonePANTHERPTHR16719CYTOCHROME C OXIDASE COPPER CHAPERONEcoord: 8..80
score: 5.3
IPR007745Cytochrome c oxidase copper chaperonePFAMPF05051COX17coord: 36..80
score: 3.9
IPR009069Cysteine alpha-hairpin motif superfamilyGENE3DG3DSA:1.10.810.10coord: 44..74
score: 2.
IPR009069Cysteine alpha-hairpin motif superfamilyunknownSSF47072Cysteine alpha-hairpin motifcoord: 29..80
score: 4.97

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G007490Csa3G105960Cucumber (Chinese Long) v2culsiB217
Lsi05G007490CSPI03G06190Wild cucumber (PI 183967)cpilsiB215
Lsi05G007490Cucsa.074780Cucumber (Gy14) v1cgylsiB075
Lsi05G007490CmaCh04G009020Cucurbita maxima (Rimu)cmalsiB687
Lsi05G007490CmoCh04G009690Cucurbita moschata (Rifu)cmolsiB680
Lsi05G007490Cla011790Watermelon (97103) v1lsiwmB355
Lsi05G007490MELO3C016512Melon (DHL92) v3.5.1lsimeB371
Lsi05G007490ClCG10G006950Watermelon (Charleston Gray)lsiwcgB319
Lsi05G007490MELO3C016512.2Melon (DHL92) v3.6.1lsimedB400
Lsi05G007490Cla97C10G190810Watermelon (97103) v2lsiwmbB323
Lsi05G007490Bhi11G000656Wax gourdlsiwgoB414
Lsi05G007490Cp4.1LG01g08580Cucurbita pepo (Zucchini)cpelsiB366
Lsi05G007490CsGy3G006290Cucumber (Gy14) v2cgyblsiB203
Lsi05G007490Carg00020Silver-seed gourdcarlsiB614
Lsi05G007490CsaV3_3G006320Cucumber (Chinese Long) v3cuclsiB235
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G007490Melon (DHL92) v3.6.1lsimedB387
Lsi05G007490Silver-seed gourdcarlsiB509
Lsi05G007490Cucumber (Chinese Long) v3cuclsiB217
Lsi05G007490Watermelon (97103) v2lsiwmbB322
Lsi05G007490Wax gourdlsiwgoB410
Lsi05G007490Cucumber (Gy14) v1cgylsiB159
Lsi05G007490Cucurbita maxima (Rimu)cmalsiB313
Lsi05G007490Cucurbita maxima (Rimu)cmalsiB315
Lsi05G007490Cucurbita moschata (Rifu)cmolsiB302
Lsi05G007490Cucurbita moschata (Rifu)cmolsiB305
Lsi05G007490Cucurbita pepo (Zucchini)cpelsiB173
Lsi05G007490Cucurbita pepo (Zucchini)cpelsiB176
Lsi05G007490Cucurbita pepo (Zucchini)cpelsiB370
Lsi05G007490Wild cucumber (PI 183967)cpilsiB197
Lsi05G007490Cucumber (Chinese Long) v2culsiB198
Lsi05G007490Melon (DHL92) v3.5.1lsimeB380
Lsi05G007490Watermelon (Charleston Gray)lsiwcgB318
Lsi05G007490Cucumber (Gy14) v2cgyblsiB183