MELO3C016339 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C016339
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Locationchr7 : 22200588 .. 22205192 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGACATATTTTTGTGACACTCTCTACGCGCCTTGCTAACGCTGGCGCCAACAACAATACAATTCAACCACACAAAACCAAACAACCTCAGTCTCCTTTCCATGGCCGTCTCCGCCCCATTCTTCGCCTCTCCGCCCGCTGCCACTACCTCCCACCAATCCCCTTCTCTTTCTTTCTATCCTCCTTCCTTTCCCAGAAGAATTTTTACTCCTCTTTCCTCCTCTTCTTCTCTACCTTCTTTCCGTGTCAATTCCGCCGTTTCTCACTCTGTCTCCTCCACCACCGCCATCGAATCCGATTCTCCCTCTAAAACCTTGCCGTTTCGGGTTGGACACGGCTTCGATCTTCATCGGTTAGAACCTGGGTACCCTTTGATTATTGGGGGGATTAGTATTCCCCATGATAGAGGCTGCGAAGCTCATTCCGATGGTATTTTTCTTTGGTTTCTCTTTCTTTTTTGTGTTTTTGTTCGTTGCTATTTAATTTTGGGTGTTCAAATTCTTTCTCAGTTTTGTTGTTGGCTAATTATCCCTTCAATTTAACATTGCATAGTGCTGTTTTGGTGTGCAATTGGCCGCTGTTGATTGCGTTACAGACGATAGCACTACTTTTTTACTTACTGAGAATTTTATGGGCTAATTTGATAGAAGTTTGACATCTTTCAACTTCTTTTTACGTAATTTTTTTTTTTAGTTTTTAATCTATGAAAAATGGCAGCATCTTGTGTTATGTCAATTTCTGTTATATATTTGATAATCCATGGGATGGTATGTTAATGTTGGTGATAAGACTTGGATCTTACAGTTATTATAGTTTACTATTATTCAAGTGATTTTGTACATTTGAAGTTTGGAGTGTTGGAGATCAGTTTATTTAAGCTCAATTGCTTGCAATTGGTCTGTTGAATGGAGCTCCCATCTCGTCATGTTTTTTATAGAAGTGTATACTATAAAATAAGTAATAACCCAAAGTTTTTTTTTTTTTTGTCTCTGCTGTATAAAGTTTCCTGCAACACTTGTTAAATTTTGAAGTGTTTATTTCTTTTGTTGATTTAGGAGATGTTCTACTACACTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAGATCTTTCCAGATTCAGATCCCAAATGGAAGGGTGCTCCATCATCCGTTTTCATAAAAGAAGCTGTAAGTAGTTACGGCATAGTGAACTCTTACACACTTACCAAAGTTTGTTATCTTTATATATGAAACTTGTCCTCCTTGACTTGTTTAATATGAATCACTTGGTGCATTGTACATATGTTTTAGGATTCTGTTGTTGCTTTCGTATGGGATGTCATGATATCTTTTTGCTTGCTTGTTGTTCAATTTAGAGAGGTCCTCAATAGCATAGTGTGGATAAACCAAATCACACAACTCTTTCTCAGGTTTTGGAAATTTTATTGGTCTCTTTGGTGCATATATGTTATGTCACATGTTGAGTTTTTATTCAGGATCGAAGTAGTGGTTGTGTCAAATTTTATGCATCTCAATAAATTGAGTATATCCAGTATTTTCTTCCTCGGAACTTTATGTTTATCTAACAACAGAATTTTCATCGTACCATTTGAAACTGTTAGGATACTTCCTAACAAGACTCAGTATGTTTCATATATTGAGAATTAATTATGAACTACAATATGATCCAAGTTTATGGTACTCGGGACTGCCTATCTTGAAAATACTACTCAAGACCTATCTACTCAACAACTCCCCTTTCTTCACTCACCAACTTCTTATTTATAATCACTACTCTTAGTAACCGCCTAAATATCTAATTTTCATTATAAGCTTAACCCTATACTATTCTAGATATCTAACAGAAACAAGTGTCAAAGTCTACTAAGTGGACCTTAGATATAGTTTCTCTTCCTCAAATCAACTTATTCAACTTCAACTAGAGACTGCTCAACTTACTTCTTTGTTAAAACCCTTTCGTACCATTAGACCATTTTATGGTTCCTTTGTGTAGCTTCATCTCTAATTACCTAGAAAGAATAAGCTTCTGCAACAAGTCATGCATCTGCATGAAATGATGTCGCTTTGGGTGGAGAATTTAAGAATGTATCTCGGTCATGAAGGAAGAATCACTTTAGAACAATCTTTTAACTGAGTTATATTAAATATCTTTCACTTTTATGAAGAAACAAAAACTTCTATTGAGACGAAGGAAGCGATATACAAACAGGGGAGCATGAAGCTCTTGGAAACCAGAAGGAGCTGCAGAAAGGTTTTCCGATTCACTTGTATCAAAAGAGAAGAAAAGCTGCTAATCATTCATTTGTAAAAGGTTTTCCCTTTTACGTCTCCCTTTGAAAATGCATAGGTTTCTTCAGACAACCATTCTCACTAAACGTCATACACCGAAGTCCAAAGGAATCCAAAGAAGCTTTGTCTTCCTGTTGAAACTTCACCCAAAAACCGTTTGTGTAAAAGAATCTTGGATATCTTCTTGGGGACTCTATATGCAATTAAAACTATTGAAAGGGAACAAATATCCTAAAAATGAATGGGGCTGCTGAATCCCCGGGTCTAGGGAACCTCAGGAAGCATGATGCTGTTATCTTATGAATTTCAAAATTTTCCAATGAGATTAAGGCTTGTTGAAGATTATTGTCAGTAATCATGAATAAGGCTTCACCTGCCATTTTAGGTGCCTCTTGGAGTGCGCTGCTTCTTTTTTTTTTTTTTTCTCTTCTGTATTTTATGAAACATTTTAACGCTTCTTTTAAGAACCTCATGTAATATTTAGATTGTGAGGAATTAGAGAACTTTAAGAGGGGTTGAGAGTCATTAGAACTGTGGGCTAGACGGTTCACTCCCGCAAAATTTTAAAAGGATGCAAGGATATAACTAGCCAACTTGTCTGGGAAATTTGTCTGACACTGGGTTTTTTCAATTTTTTTTGGCAATTCTTTTATTGGCTAACCAAGCATTCATTGAGGGAAAAAAAATAATTAAAGAATAGAGTTGATCCAAATTAAACTAAAATGAGCTTTAATCTAACAAAATAAGCCAAATCAAATAATTTAAATTGCAAAATCCTTGCGCACTGAAAGCCCAAGATACGTGTGCAATCAAACCACGAAGCAAACCTCTTCTCAAGGAGTCTCTGTCAAGTGAATGTTATAACAAAAATATACATAAAATTAGAGATTGATGCTTTAACCAGCGTGTCCCTGCTTCCTATGTTGTTCTGTTACTCTCAAATGCTAGGATAAGTTACTGGATTCACTGTTGCTCTTTGCAAATGCTTGGAGAATGGATGGAGTTGGTATTACATGGCTCTGTTGTAGCTTGTACAAATCATTAATTCATGCATTAAATACAAGCTACATCAACTTAAGTTTTCCATCTTTAGGTTTCATAAATTCAGGCTTATTAATCGTGAGGTAAACCCAAGTACACAACTACAACAGTTTGGCCTAGTGCTCCTTGGTCAATTAGGGATGATACATATAATTAATAAAGGATTTTTGGGGATGGGTTCAAGTCCTAATGACCTTCTATTTAGGGATCTAGTGTCCTACAAGTAATCTTGGCAACTAAATATAGTAGTGTCAAGCAACTATCCTCAAAGAATAATTGAGGTGCATGCAAGGTGGTGCAAACATTCACAGGTAAAAGAAATTATGAGATGAACGGTATTGGATGTCGAAGGGAAATGTTAATCGATAATGAGAAACTATCAACTCACCTACACCATGCTGTGTAGTTATAAAATGTTTGTTGAACTATCACTTGATGGGTTATAGTAAAGTTATCACCTTTTCTTAAATTTCAACCCAAGGTCGAACACATGGGACAATCATGTAAAATGAAAAGAGAATAACATTATAGGATAGGGGGTATGGACTTTGCAACACTGTCTTTAATATTCAAAAAGTGACTCTGATAGGTAGGTTCGGTACGTTTATCTTTTCAACATGTGGTTGATCAATAAACCTAATCGTAAAGGCTAAATCTCAATCCGTATGTGGCAAGTGAATCCATTTACCAAACCAAAGTTGAAATAAATTTTTCGAATTCAGTTCATTTTAGATAAAGCTCAATTATCTGATTACTGAGATGAAATCTTTGGTTGATTTCAGGTGAGACTGATGCACGAGGCAGGTTATGACATAGGCAACCTGGATGCCACATTGATACTTCAAAGACCAAAGCTTAGCCCTCACAAGGAAGCTATCAGAGCAAACCTCTCTGAACTCCTGGGAGCCGACCCCTCTGTCGTGAATCTGAAAGCGAAAACACACGAGAAGGTCGATAGTCTTGGCGAAAATAGAAGCATTGCTGCTCATACTGTGGTCCTGTTGATGAGGAGATAGAAGCCCTGTCCTCCCATTAGTACTGCTGTGTAAGTGTAATAACAACAGTGCTCTCCGTTTTAATTGGAATATGCTTTATTGTTAAAATACTTTGAATTTTCCCCCATCCCCTCCACAGTTCCCTGCAAAGTGCAAACAATTGTAAGTTGGGTTGTTACATTAAACGTTTTAATCATTTAACAACGTTGAAAAGCAACAGTATGGTGGGAGAATATTAGAAATTGCCTACAATTATTGTT

mRNA sequence

AATGACATATTTTTGTGACACTCTCTACGCGCCTTGCTAACGCTGGCGCCAACAACAATACAATTCAACCACACAAAACCAAACAACCTCAGTCTCCTTTCCATGGCCGTCTCCGCCCCATTCTTCGCCTCTCCGCCCGCTGCCACTACCTCCCACCAATCCCCTTCTCTTTCTTTCTATCCTCCTTCCTTTCCCAGAAGAATTTTTACTCCTCTTTCCTCCTCTTCTTCTCTACCTTCTTTCCGTGTCAATTCCGCCGTTTCTCACTCTGTCTCCTCCACCACCGCCATCGAATCCGATTCTCCCTCTAAAACCTTGCCGTTTCGGGTTGGACACGGCTTCGATCTTCATCGGTTAGAACCTGGGTACCCTTTGATTATTGGGGGGATTAGTATTCCCCATGATAGAGGCTGCGAAGCTCATTCCGATGGAGATGTTCTACTACACTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAGATCTTTCCAGATTCAGATCCCAAATGGAAGGGTGCTCCATCATCCGTTTTCATAAAAGAAGCTGTGAGACTGATGCACGAGGCAGGTTATGACATAGGCAACCTGGATGCCACATTGATACTTCAAAGACCAAAGCTTAGCCCTCACAAGGAAGCTATCAGAGCAAACCTCTCTGAACTCCTGGGAGCCGACCCCTCTGTCGTGAATCTGAAAGCGAAAACACACGAGAAGGTCGATAGTCTTGGCGAAAATAGAAGCATTGCTGCTCATACTGTGGTCCTGTTGATGAGGAGATAGAAGCCCTGTCCTCCCATTAGTACTGCTGTGTAAGTGTAATAACAACAGTGCTCTCCGTTTTAATTGGAATATGCTTTATTGTTAAAATACTTTGAATTTTCCCCCATCCCCTCCACAGTTCCCTGCAAAGTGCAAACAATTGTAAGTTGGGTTGTTACATTAAACGTTTTAATCATTTAACAACGTTGAAAAGCAACAGTATGGTGGGAGAATATTAGAAATTGCCTACAATTATTGTT

Coding sequence (CDS)

ATGGCCGTCTCCGCCCCATTCTTCGCCTCTCCGCCCGCTGCCACTACCTCCCACCAATCCCCTTCTCTTTCTTTCTATCCTCCTTCCTTTCCCAGAAGAATTTTTACTCCTCTTTCCTCCTCTTCTTCTCTACCTTCTTTCCGTGTCAATTCCGCCGTTTCTCACTCTGTCTCCTCCACCACCGCCATCGAATCCGATTCTCCCTCTAAAACCTTGCCGTTTCGGGTTGGACACGGCTTCGATCTTCATCGGTTAGAACCTGGGTACCCTTTGATTATTGGGGGGATTAGTATTCCCCATGATAGAGGCTGCGAAGCTCATTCCGATGGAGATGTTCTACTACACTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAGATCTTTCCAGATTCAGATCCCAAATGGAAGGGTGCTCCATCATCCGTTTTCATAAAAGAAGCTGTGAGACTGATGCACGAGGCAGGTTATGACATAGGCAACCTGGATGCCACATTGATACTTCAAAGACCAAAGCTTAGCCCTCACAAGGAAGCTATCAGAGCAAACCTCTCTGAACTCCTGGGAGCCGACCCCTCTGTCGTGAATCTGAAAGCGAAAACACACGAGAAGGTCGATAGTCTTGGCGAAAATAGAAGCATTGCTGCTCATACTGTGGTCCTGTTGATGAGGAGATAG

Protein sequence

MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIESDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR*
Homology
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BLAST of MELO3C016339 vs. Swiss-Prot
Match: ISPF_ARATH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=ISPF PE=1 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 4.0e-87
Identity = 160/191 (83.77%), Postives = 171/191 (89.53%), Query Frame = 1 

Query: 40  SSSSLPSFRVNSAVSHSVSSTTAIESDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIP 99
           S S  PS  V SA S +V    ++ S+ P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IP
Sbjct: 42  SLSCRPSASV-SAASSAVDVNESVTSEKPTKTLPFRIGHGFDLHRLEPGYPLIIGGIVIP 101

Query: 100 HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHE 159
           HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEAVRLM E
Sbjct: 102 HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLMDE 161

Query: 160 AGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSI 219
           AGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSI
Sbjct: 162 AGYEIGNLDATLILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEKVDSLGENRSI 221

Query: 220 AAHTVVLLMRR 231
           AAHTV+LLM++
Sbjct: 222 AAHTVILLMKK 231

[Close]
BLAST of MELO3C016339 vs. Swiss-Prot
Match: ISPF_CATRO (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Catharanthus roseus GN=ISPF PE=2 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.9e-85
Identity = 160/209 (76.56%), Postives = 175/209 (83.73%), Query Frame = 1 

Query: 36  TPLSSSSSLPSF--------RVNSAVSHSVSSTTAIESD------SPSKTLPFRVGHGFD 95
           +P+  S + PS+        R  S V  + +S  A+E++      +PSK L FRVGHGFD
Sbjct: 28  SPVGGSKTTPSYIRLSTRQSRTLSLVVSAAASGAAVEAEPKFAAVTPSKILSFRVGHGFD 87

Query: 96  LHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKW 155
           LHRLEPGYPLIIGGI+IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPD+DPKW
Sbjct: 88  LHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDTDPKW 147

Query: 156 KGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVN 215
           KGAPSSVFIKEAVRLM EAGY++GNLDATLILQRPK+SPHKEAIR NL +LLGADP VVN
Sbjct: 148 KGAPSSVFIKEAVRLMDEAGYELGNLDATLILQRPKVSPHKEAIRQNLCQLLGADPCVVN 207

Query: 216 LKAKTHEKVDSLGENRSIAAHTVVLLMRR 231
           LKAKTHEKVDSLGENRSIAAHTVVLLMR+
Sbjct: 208 LKAKTHEKVDSLGENRSIAAHTVVLLMRK 236

[Close]
BLAST of MELO3C016339 vs. Swiss-Prot
Match: ISPF_ORYSJ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF PE=2 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 5.7e-81
Identity = 159/234 (67.95%), Postives = 176/234 (75.21%), Query Frame = 1 

Query: 1   MAVSAPFFASPPAATT----SHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHS 60
           MA ++  F + P AT     +  +PS S   PS   R           PS    +AV   
Sbjct: 1   MATASSLFLASPVATAPTARARSTPSASPARPSLRLR----------RPSTLAAAAVQAE 60

Query: 61  VSSTTAIESDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHC 120
                A     P+  LPFRVGHGFDLHRLEPG PLIIGGI IPHDRGC+AHSDGDVLLHC
Sbjct: 61  HQPAVAAAPKPPA--LPFRVGHGFDLHRLEPGLPLIIGGIDIPHDRGCDAHSDGDVLLHC 120

Query: 121 VVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRP 180
           VVDAILGALGLPDIGQIFPDSDP+WKGA SSVF++EAV+LMHEAGY++GNLDATLILQ+P
Sbjct: 121 VVDAILGALGLPDIGQIFPDSDPRWKGADSSVFMREAVKLMHEAGYELGNLDATLILQKP 180

Query: 181 KLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 231
           K+SP KE IR+NL +LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMR+
Sbjct: 181 KISPFKETIRSNLCDLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRK 222

[Close]
BLAST of MELO3C016339 vs. Swiss-Prot
Match: ISPDF_ERYLH (Bifunctional enzyme IspD/IspF OS=Erythrobacter litoralis (strain HTCC2594) GN=ispDF PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-41
Identity = 79/165 (47.88%), Postives = 108/165 (65.45%), Query Frame = 1 

Query: 66  DSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGAL 125
           D  +  LP RVG GFD+H+LE G  L +GGI + HD+G   HSD DV LH +VDA+LGA+
Sbjct: 218 DFMADLLPVRVGTGFDVHKLEAGEELWLGGIRLEHDKGLAGHSDADVALHAIVDALLGAI 277

Query: 126 GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAI 185
           G  DIG  FP SDP+WKGA SS FI+ A +L+ EAGY +GN+D T+I + P++ PH++A+
Sbjct: 278 GKGDIGDHFPPSDPQWKGAASSAFIEHAAKLVDEAGYRVGNIDLTIICEAPRIGPHRDAM 337

Query: 186 RANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 231
              ++ELL   P  +++KA T EK+   G    IAA     ++R+
Sbjct: 338 GQRIAELLATSPDAISVKATTTEKLGFTGRGEGIAAQAAATVVRK 382

[Close]
BLAST of MELO3C016339 vs. Swiss-Prot
Match: ISPF_RALPJ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia pickettii (strain 12J) GN=ispF PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.0e-41
Identity = 82/158 (51.90%), Postives = 107/158 (67.72%), Query Frame = 1 

Query: 72  LPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIG 131
           +  R+G G+D+H L  G  LI+GG+ IPH RG   HSD D LLH + DA+ GA GL DIG
Sbjct: 4   MDIRIGQGYDVHALVEGRKLILGGVEIPHTRGLLGHSDADALLHAITDALFGAAGLGDIG 63

Query: 132 QIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSE 191
           + FPD+DP + GA S V ++EAVR +H+AGY +GN+DAT+I Q+PKL+PH   + ANL+E
Sbjct: 64  RHFPDTDPAFAGADSRVLLREAVRRVHKAGYAVGNVDATVIAQKPKLAPHVPGMVANLAE 123

Query: 192 LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMR 230
            LG  P   N+KAKT+EK+   G+   I A  VVL+ R
Sbjct: 124 DLGIAPERCNVKAKTNEKLGFEGKEEGIVAQAVVLIYR 161

[Close]
BLAST of MELO3C016339 vs. TrEMBL
Match: A0A0A0KWV1_CUCSA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucumis sativus GN=Csa_4G049620 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 1.7e-116
Identity = 218/233 (93.56%), Postives = 220/233 (94.42%), Query Frame = 1 

Query: 1   MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPL---SSSSSLPSFRVNSAVSHSV 60
           MA+SAP FASP AATTSHQS SLS YPPSFP   FTPL   SSSSSLPSFRVNSA SHSV
Sbjct: 1   MALSAPLFASPAAATTSHQSLSLSLYPPSFPTTKFTPLSSFSSSSSLPSFRVNSAASHSV 60

Query: 61  SSTTAIESDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCV 120
           SSTTAI+SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCV
Sbjct: 61  SSTTAIKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCV 120

Query: 121 VDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPK 180
           VDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEAVRLMHEAGYDIGNLDATLILQRPK
Sbjct: 121 VDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLMHEAGYDIGNLDATLILQRPK 180

Query: 181 LSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 231
           LSPHKEAIRA LSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 LSPHKEAIRAKLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 233

[Close]
BLAST of MELO3C016339 vs. TrEMBL
Match: A0A0D2QHJ5_GOSRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Gossypium raimondii GN=B456_003G085800 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.2e-90
Identity = 173/205 (84.39%), Postives = 183/205 (89.27%), Query Frame = 1 

Query: 29  SFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTA---IESDSPSKTLPFRVGHGFDLHRL 88
           S  RR  T +SSSSS  SF + ++VS + +ST     I S  PSK+LPFRVGHGFDLHRL
Sbjct: 33  SITRRHTTLVSSSSSSSSFTLRASVSSAATSTAVDGTISSTKPSKSLPFRVGHGFDLHRL 92

Query: 89  EPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAP 148
           EPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAP
Sbjct: 93  EPGYPLIIGGIDIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAP 152

Query: 149 SSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAK 208
           SSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHK  I+ANLSELLGADPSVVNLKAK
Sbjct: 153 SSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKGVIKANLSELLGADPSVVNLKAK 212

Query: 209 THEKVDSLGENRSIAAHTVVLLMRR 231
           THEKVDSLGENRSIAAHTVVLLMR+
Sbjct: 213 THEKVDSLGENRSIAAHTVVLLMRK 237

[Close]
BLAST of MELO3C016339 vs. TrEMBL
Match: W9SB94_9ROSA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Morus notabilis GN=L484_006708 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.8e-89
Identity = 181/245 (73.88%), Postives = 201/245 (82.04%), Query Frame = 1 

Query: 2   AVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSS----SSSLPSFRVNSAVSH-- 61
           A ++  +AS     +S + PSLS +P S    +FTP +S    SSS  S R++S  +   
Sbjct: 3   ASTSSLYASSLLPKSSAKYPSLSSFPRS---SLFTPPNSTNLFSSSPLSLRLSSTTTPPP 62

Query: 62  ----SVSSTTAIE------SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCE 121
               S S+  A+E      S +P K+LPFRVGHGFDLHRLEPGYPLIIGGI+IPH+RGCE
Sbjct: 63  SAVPSASAAAALEAQPSPASATPLKSLPFRVGHGFDLHRLEPGYPLIIGGINIPHERGCE 122

Query: 122 AHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIG 181
           AHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IG
Sbjct: 123 AHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIG 182

Query: 182 NLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVV 231
           NLDATLILQRPKLSPHKEAIRANLSELLGADP+VVNLKAKTHEKVDSLGENRSIAAHTVV
Sbjct: 183 NLDATLILQRPKLSPHKEAIRANLSELLGADPAVVNLKAKTHEKVDSLGENRSIAAHTVV 242

[Close]
BLAST of MELO3C016339 vs. TrEMBL
Match: A0A0M3SH19_MORAL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Morus alba PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.8e-89
Identity = 179/246 (72.76%), Postives = 200/246 (81.30%), Query Frame = 1 

Query: 2   AVSAPFFASPPAATTSHQSPSLS-------FYPPSFPRRIFT--PLSSSSSLPSFRVNSA 61
           A ++  +AS     ++ +SPSLS       F PP+    +F+  PLS  SS  +    SA
Sbjct: 3   ASTSSLYASSLLPKSAAKSPSLSCFPRSSLFTPPNSTTNLFSSSPLSLRSSSTTTPPPSA 62

Query: 62  VSHSVSSTTAIE--------SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGC 121
           V  + ++ TA          S +PSK+LPFRVGHGFDLHRLEPGYPLIIGGI+IPH+RGC
Sbjct: 63  VPSASANATAAALEAQPSPASATPSKSLPFRVGHGFDLHRLEPGYPLIIGGINIPHERGC 122

Query: 122 EAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDI 181
           EAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI+EAVRLMHEAGY+I
Sbjct: 123 EAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIREAVRLMHEAGYEI 182

Query: 182 GNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV 231
           GNLDATLILQRPKLSPHKEAIRANLSELLGADP+VVNLKAKTHEKVDSLGENRSIAAHTV
Sbjct: 183 GNLDATLILQRPKLSPHKEAIRANLSELLGADPAVVNLKAKTHEKVDSLGENRSIAAHTV 242

[Close]
BLAST of MELO3C016339 vs. TrEMBL
Match: H9MZJ4_9GENT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mitragyna speciosa GN=MDS PE=2 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 3.0e-89
Identity = 170/225 (75.56%), Postives = 190/225 (84.44%), Query Frame = 1 

Query: 6   PFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTAIES 65
           P   SPP  + +  + +LS+Y  +     FT  S  SS PS  V SA S +V + + + +
Sbjct: 18  PAATSPPITSRTCATTTLSYYTTTSSPLKFT--SKRSSKPSTLVVSAASTAVEADSHLSA 77

Query: 66  DSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGAL 125
             PSK+LPFR+GHGFDLHRLEPGYPLIIGG++IPH+RGCEAHSDGDVLLHCVVDAILGAL
Sbjct: 78  AVPSKSLPFRIGHGFDLHRLEPGYPLIIGGVNIPHERGCEAHSDGDVLLHCVVDAILGAL 137

Query: 126 GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAI 185
           GLPDIGQIFPDSDPKWKGA SSVF+KEAVRLMHEAGY+IGNLDATLILQRPKLSPHKE I
Sbjct: 138 GLPDIGQIFPDSDPKWKGAASSVFMKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKEVI 197

Query: 186 RANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 231
           RANL +LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMR+
Sbjct: 198 RANLCQLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRK 240

[Close]
BLAST of MELO3C016339 vs. TAIR10
Match: AT1G63970.1 (AT1G63970.1 isoprenoid F)

HSP 1 Score: 322.4 bits (825), Expect = 2.3e-88
Identity = 160/191 (83.77%), Postives = 171/191 (89.53%), Query Frame = 1 

Query: 40  SSSSLPSFRVNSAVSHSVSSTTAIESDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIP 99
           S S  PS  V SA S +V    ++ S+ P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IP
Sbjct: 42  SLSCRPSASV-SAASSAVDVNESVTSEKPTKTLPFRIGHGFDLHRLEPGYPLIIGGIVIP 101

Query: 100 HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHE 159
           HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEAVRLM E
Sbjct: 102 HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLMDE 161

Query: 160 AGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSI 219
           AGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSI
Sbjct: 162 AGYEIGNLDATLILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEKVDSLGENRSI 221

Query: 220 AAHTVVLLMRR 231
           AAHTV+LLM++
Sbjct: 222 AAHTVILLMKK 231

[Close]
BLAST of MELO3C016339 vs. NCBI nr
Match: gi|659102205|ref|XP_008452007.1| (PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucumis melo])

HSP 1 Score: 460.7 bits (1184), Expect = 1.5e-126
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1 

Query: 1   MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSST 60
           MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSST
Sbjct: 1   MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSST 60

Query: 61  TAIESDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDA 120
           TAIESDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDA
Sbjct: 61  TAIESDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDA 120

Query: 121 ILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSP 180
           ILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSP
Sbjct: 121 ILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSP 180

Query: 181 HKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 231
           HKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 HKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 230

[Close]
BLAST of MELO3C016339 vs. NCBI nr
Match: gi|449457594|ref|XP_004146533.1| (PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucumis sativus])

HSP 1 Score: 426.8 bits (1096), Expect = 2.4e-116
Identity = 218/233 (93.56%), Postives = 220/233 (94.42%), Query Frame = 1 

Query: 1   MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPL---SSSSSLPSFRVNSAVSHSV 60
           MA+SAP FASP AATTSHQS SLS YPPSFP   FTPL   SSSSSLPSFRVNSA SHSV
Sbjct: 1   MALSAPLFASPAAATTSHQSLSLSLYPPSFPTTKFTPLSSFSSSSSLPSFRVNSAASHSV 60

Query: 61  SSTTAIESDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCV 120
           SSTTAI+SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCV
Sbjct: 61  SSTTAIKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCV 120

Query: 121 VDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPK 180
           VDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEAVRLMHEAGYDIGNLDATLILQRPK
Sbjct: 121 VDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLMHEAGYDIGNLDATLILQRPK 180

Query: 181 LSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 231
           LSPHKEAIRA LSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 LSPHKEAIRAKLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 233

[Close]
BLAST of MELO3C016339 vs. NCBI nr
Match: gi|823141444|ref|XP_012470543.1| (PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Gossypium raimondii])

HSP 1 Score: 340.9 bits (873), Expect = 1.8e-90
Identity = 173/205 (84.39%), Postives = 183/205 (89.27%), Query Frame = 1 

Query: 29  SFPRRIFTPLSSSSSLPSFRVNSAVSHSVSSTTA---IESDSPSKTLPFRVGHGFDLHRL 88
           S  RR  T +SSSSS  SF + ++VS + +ST     I S  PSK+LPFRVGHGFDLHRL
Sbjct: 33  SITRRHTTLVSSSSSSSSFTLRASVSSAATSTAVDGTISSTKPSKSLPFRVGHGFDLHRL 92

Query: 89  EPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAP 148
           EPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAP
Sbjct: 93  EPGYPLIIGGIDIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAP 152

Query: 149 SSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAK 208
           SSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHK  I+ANLSELLGADPSVVNLKAK
Sbjct: 153 SSVFIKEAVRLMHEAGYEIGNLDATLILQRPKLSPHKGVIKANLSELLGADPSVVNLKAK 212

Query: 209 THEKVDSLGENRSIAAHTVVLLMRR 231
           THEKVDSLGENRSIAAHTVVLLMR+
Sbjct: 213 THEKVDSLGENRSIAAHTVVLLMRK 237

[Close]
BLAST of MELO3C016339 vs. NCBI nr
Match: gi|225426150|ref|XP_002278406.1| (PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Vitis vinifera])

HSP 1 Score: 337.8 bits (865), Expect = 1.5e-89
Identity = 178/232 (76.72%), Postives = 193/232 (83.19%), Query Frame = 1 

Query: 1   MAVSAPFFASP--PAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVS 60
           MA++AP  AS     ++T    P  S Y PS      T LS  S+L    V +A + +V 
Sbjct: 1   MAMAAPIHASSITKISSTKQIYPFTSHYRPSSLVLSHT-LSLRSTLRRPMVAAAATTAVE 60

Query: 61  STTAIESDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVV 120
           +     S +PSK+LPFRVGHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVV
Sbjct: 61  AEPRSNSTAPSKSLPFRVGHGFDLHRLEPGYPLIIGGIDIPHDRGCEAHSDGDVLLHCVV 120

Query: 121 DAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKL 180
           DAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKL
Sbjct: 121 DAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQRPKL 180

Query: 181 SPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 231
           SPHKEAIR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMR+
Sbjct: 181 SPHKEAIRSNLSQLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRK 231

[Close]
BLAST of MELO3C016339 vs. NCBI nr
Match: gi|927030530|gb|ALD62475.1| (2-C-methyl-D-erythritol 2,4- cyclodiphosphate synthase [Morus alba])

HSP 1 Score: 337.0 bits (863), Expect = 2.5e-89
Identity = 179/246 (72.76%), Postives = 200/246 (81.30%), Query Frame = 1 

Query: 2   AVSAPFFASPPAATTSHQSPSLS-------FYPPSFPRRIFT--PLSSSSSLPSFRVNSA 61
           A ++  +AS     ++ +SPSLS       F PP+    +F+  PLS  SS  +    SA
Sbjct: 3   ASTSSLYASSLLPKSAAKSPSLSCFPRSSLFTPPNSTTNLFSSSPLSLRSSSTTTPPPSA 62

Query: 62  VSHSVSSTTAIE--------SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGC 121
           V  + ++ TA          S +PSK+LPFRVGHGFDLHRLEPGYPLIIGGI+IPH+RGC
Sbjct: 63  VPSASANATAAALEAQPSPASATPSKSLPFRVGHGFDLHRLEPGYPLIIGGINIPHERGC 122

Query: 122 EAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDI 181
           EAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI+EAVRLMHEAGY+I
Sbjct: 123 EAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIREAVRLMHEAGYEI 182

Query: 182 GNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV 231
           GNLDATLILQRPKLSPHKEAIRANLSELLGADP+VVNLKAKTHEKVDSLGENRSIAAHTV
Sbjct: 183 GNLDATLILQRPKLSPHKEAIRANLSELLGADPAVVNLKAKTHEKVDSLGENRSIAAHTV 242

The following BLAST results are available for this feature:
BLAST of MELO3C016339 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ISPF_ARATH4.0e-8783.772-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidop... [more]
ISPF_CATRO2.9e-8576.562-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Catharan... [more]
ISPF_ORYSJ5.7e-8167.952-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sa... [more]
ISPDF_ERYLH1.2e-4147.88Bifunctional enzyme IspD/IspF OS=Erythrobacter litoralis (strain HTCC2594) GN=is... [more]
ISPF_RALPJ2.0e-4151.902-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia pickettii (st... [more]
BLAST of MELO3C016339 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWV1_CUCSA1.7e-11693.562-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucumis sativus GN=Csa_... [more]
A0A0D2QHJ5_GOSRA1.2e-9084.392-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Gossypium raimondii GN=... [more]
W9SB94_9ROSA1.8e-8973.882-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Morus notabilis GN=L484... [more]
A0A0M3SH19_MORAL1.8e-8972.762-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Morus alba PE=2 SV=1[more]
H9MZJ4_9GENT3.0e-8975.562-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mitragyna speciosa GN=M... [more]
BLAST of MELO3C016339 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G63970.12.3e-8883.77 isoprenoid F[more]
BLAST of MELO3C016339 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102205|ref|XP_008452007.1|1.5e-126100.00PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic ... [more]
gi|449457594|ref|XP_004146533.1|2.4e-11693.56PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic ... [more]
gi|823141444|ref|XP_012470543.1|1.8e-9084.39PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-... [more]
gi|225426150|ref|XP_002278406.1|1.5e-8976.72PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic ... [more]
gi|927030530|gb|ALD62475.1|2.5e-8972.762-C-methyl-D-erythritol 2,4- cyclodiphosphate synthase [Morus alba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003526MECDP_synthase
IPR020555MECDP_synthase_CS
Vocabulary: Molecular Function
TermDefinition
GO:00086852-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0016114terpenoid biosynthetic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0009637 response to blue light
biological_process GO:0016114 terpenoid biosynthetic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0009744 response to sucrose
biological_process GO:0010114 response to red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0010218 response to far red light
biological_process GO:0010155 regulation of proton transport
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005575 cellular_component
molecular_function GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU43412melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016339T1MELO3C016339T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU43412MU43412transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseGENE3DG3DSA:3.30.1330.50coord: 72..229
score: 1.9
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseHAMAPMF_00107IspFcoord: 74..229
score: 33
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasePFAMPF02542YgbBcoord: 74..227
score: 3.6
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseTIGRFAMsTIGR00151TIGR00151coord: 75..229
score: 1.5
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseunknownSSF69765IpsF-likecoord: 73..229
score: 8.11
IPR0205552-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved sitePROSITEPS01350ISPFcoord: 108..123
scor
NoneNo IPR availablePANTHERPTHR32125FAMILY NOT NAMEDcoord: 68..230
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C016339Csa4G049620Cucumber (Chinese Long) v2cumeB312
MELO3C016339Cla014654Watermelon (97103) v1mewmB505
MELO3C016339ClCG07G007880Watermelon (Charleston Gray)mewcgB484
MELO3C016339Cla97C07G135070Watermelon (97103) v2mewmbB490
MELO3C016339Bhi01G001788Wax gourdmewgoB568
MELO3C016339CSPI04G05930Wild cucumber (PI 183967)cpimeB310
MELO3C016339Cucsa.106950Cucumber (Gy14) v1cgymeB141
MELO3C016339CmaCh04G007250Cucurbita maxima (Rimu)cmameB694
MELO3C016339CmoCh04G007690Cucurbita moschata (Rifu)cmomeB686
MELO3C016339Lsi07G009020Bottle gourd (USVL1VR-Ls)lsimeB457
MELO3C016339Cp4.1LG01g00240Cucurbita pepo (Zucchini)cpemeB415
MELO3C016339CsGy4G005800Cucumber (Gy14) v2cgybmeB269
MELO3C016339Carg14122Silver-seed gourdcarmeB0924
MELO3C016339CsaV3_4G006100Cucumber (Chinese Long) v3cucmeB315
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C016339Silver-seed gourdcarmeB0596
MELO3C016339Cucumber (Chinese Long) v3cucmeB258
MELO3C016339Cucumber (Chinese Long) v3cucmeB417
MELO3C016339Cucumber (Chinese Long) v3cucmeB418
MELO3C016339Watermelon (97103) v2mewmbB455
MELO3C016339Watermelon (97103) v2mewmbB483
MELO3C016339Melon (DHL92) v3.5.1memeB021
MELO3C016339Melon (DHL92) v3.5.1memeB022
MELO3C016339Melon (DHL92) v3.5.1memeB151
MELO3C016339Cucumber (Gy14) v1cgymeB501
MELO3C016339Cucurbita maxima (Rimu)cmameB301
MELO3C016339Cucurbita moschata (Rifu)cmomeB274
MELO3C016339Cucurbita moschata (Rifu)cmomeB294
MELO3C016339Wild cucumber (PI 183967)cpimeB252
MELO3C016339Wild cucumber (PI 183967)cpimeB405
MELO3C016339Cucumber (Chinese Long) v2cumeB257
MELO3C016339Cucumber (Chinese Long) v2cumeB407
MELO3C016339Cucumber (Chinese Long) v2cumeB408
MELO3C016339Watermelon (Charleston Gray)mewcgB467
MELO3C016339Watermelon (Charleston Gray)mewcgB468
MELO3C016339Watermelon (Charleston Gray)mewcgB478
MELO3C016339Watermelon (97103) v1mewmB526
MELO3C016339Watermelon (97103) v1mewmB530
MELO3C016339Cucurbita pepo (Zucchini)cpemeB196
MELO3C016339Bottle gourd (USVL1VR-Ls)lsimeB038
MELO3C016339Bottle gourd (USVL1VR-Ls)lsimeB387
MELO3C016339Cucumber (Gy14) v2cgybmeB220
MELO3C016339Cucumber (Gy14) v2cgybmeB355