MELO3C014892 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C014892
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
Locationchr6 : 21992033 .. 21992639 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTACAACATCCCCACCATATTTTGTAGCTTATAAAGGCTCAAAAGGAAGTTTGTGCAGAAGAAGAGAAATTGATCAATGGAGGCAAACAAAAGAAAACTTCGAGGCTTCATGAAAGGGAAATTGATGCCTTTCTACAAGCAATACAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCATAGAGAGTGCTATAGTAGTGTTTCTTCTCAACACAACATTGCTTTATTGGTGCAGGATAACCCCAGTCGGGACACGACTGCCACTCGTGGCTCGTTAAGTCAGTCTGATCATTCATACGGAATTGTAGCTGACGAAGGTGTTGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCACGATTCAAAAGCTTGAATGAGTTACCTCATCCGATAGAAATGTCGTCGATTCCATTGCCCCACCAATAGATTTGAAGACCTTGTTTTATTTATGTTGGGGTTTACTACTTGATTATTATTCTAAGTGGACTTAAGCATTACTCGTGTGGTTGGACATAGAGTTTCTCTTACGTATATAGTAGGTCTGAATCTCTCATCTTTTATATATTTATAATGAAAAAAACTTGGGTGC

mRNA sequence

CTCTACAACATCCCCACCATATTTTGTAGCTTATAAAGGCTCAAAAGGAAGTTTGTGCAGAAGAAGAGAAATTGATCAATGGAGGCAAACAAAAGAAAACTTCGAGGCTTCATGAAAGGGAAATTGATGCCTTTCTACAAGCAATACAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCATAGAGAGTGCTATAGTAGTGTTTCTTCTCAACACAACATTGCTTTATTGGTGCAGGATAACCCCAGTCGGGACACGACTGCCACTCGTGGCTCGTTAAGTCAGTCTGATCATTCATACGGAATTGTAGCTGACGAAGGTGTTGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCACGATTCAAAAGCTTGAATGAGTTACCTCATCCGATAGAAATGTCGTCGATTCCATTGCCCCACCAATAGATTTGAAGACCTTGTTTTATTTATGTTGGGGTTTACTACTTGATTATTATTCTAAGTGGACTTAAGCATTACTCGTGTGGTTGGACATAGAGTTTCTCTTACGTATATAGTAGGTCTGAATCTCTCATCTTTTATATATTTATAATGAAAAAAACTTGGGTGC

Coding sequence (CDS)

ATGGAGGCAAACAAAAGAAAACTTCGAGGCTTCATGAAAGGGAAATTGATGCCTTTCTACAAGCAATACAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCATAGAGAGTGCTATAGTAGTGTTTCTTCTCAACACAACATTGCTTTATTGGTGCAGGATAACCCCAGTCGGGACACGACTGCCACTCGTGGCTCGTTAAGTCAGTCTGATCATTCATACGGAATTGTAGCTGACGAAGGTGTTGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCACGATTCAAAAGCTTGAATGAGTTACCTCATCCGATAGAAATGTCGTCGATTCCATTGCCCCACCAATAG

Protein sequence

MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSSQHNIALLVQDNPSRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPHQ*
Homology
[Close]
BLAST of MELO3C014892 vs. TrEMBL
Match: A0A0A0LVE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097750 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 8.8e-56
Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 1 

Query: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSSQHNIALLVQDNP 60
           MEANKRKLRGFM+GKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVS QHNI LLVQD+P
Sbjct: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVS-QHNIGLLVQDDP 60

Query: 61  SRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPH 120
            RDTTATR SLSQ D SYGI+ADEGVDVKAANYISSTLARFKSLNELPHPIE+SSIPLPH
Sbjct: 61  GRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPH 120

Query: 121 Q 122
           Q
Sbjct: 121 Q 120

[Close]
BLAST of MELO3C014892 vs. TrEMBL
Match: A0A067LN74_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10105 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-10
Identity = 47/115 (40.87%), Postives = 63/115 (54.78%), Query Frame = 1 

Query: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQ-------------TGLVGYVFHRECYSSVS 60
           ME+N RK RGFMKGKL+PFY+    + T Q                VG+V H++ Y    
Sbjct: 1   MESN-RKRRGFMKGKLIPFYRSSKATSTVQYSSKVKPSQSSPSAASVGFVVHQD-YIITP 60

Query: 61  SQHNIALLVQDNPSRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFK 103
            +  ++ +V   P+ D+   +  LSQ D  YG+  DEGVD+KAA YISS   RFK
Sbjct: 61  PKQKVSFIV---PTADSNRDK-YLSQFDKLYGVAGDEGVDIKAATYISSVQERFK 109

[Close]
BLAST of MELO3C014892 vs. TrEMBL
Match: A0A061EDX7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_017245 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-07
Identity = 42/112 (37.50%), Postives = 57/112 (50.89%), Query Frame = 1 

Query: 4   NKRKLRGFMKGKLMPFYK---------QYN----GSKTKQTGLVGYVFHRECYSSVSSQH 63
           + RK RGF+KGKL PFY+         QY      ++T  T  V +  H++   S   Q 
Sbjct: 5   SNRKRRGFIKGKLAPFYRAAKPAAAAMQYTTKVMPNQTSTTASVSFRVHQDYMVSQPKQV 64

Query: 64  NIALLVQDNPSRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFK 103
           +  L    N        R +LSQ D+ +G+  DE VD+KAA+YISS   RFK
Sbjct: 65  SFILPADKN--------RENLSQIDNFFGVAGDESVDIKAASYISSVQERFK 108

[Close]
BLAST of MELO3C014892 vs. TrEMBL
Match: A0A0D2Q4X1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G272900 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.6e-07
Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = 1 

Query: 1   MEANKRKLRGFMKGKLMPFYKQY---------NGSKTKQ----TGLVGYVFHRECYSSVS 60
           M++N RK RGF+KGKL P Y+           N +K  Q    T  VG+  HR+    +S
Sbjct: 1   MDSN-RKGRGFIKGKLAPLYRAVKPTAAVQCTNKAKPNQGSSTTASVGFRVHRDYM--IS 60

Query: 61  SQHNIALLVQDNPSRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNEL 108
               I+ +V  + +R+      +L+Q D+ +G+V DE VD+KAA YISS   RFK   +L
Sbjct: 61  QPKKISFVVPADKNRE------NLNQIDNFFGVVGDESVDIKAATYISSVRERFKLEKQL 111

[Close]
BLAST of MELO3C014892 vs. TrEMBL
Match: B9RBG3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1676450 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.4e-07
Identity = 41/118 (34.75%), Postives = 58/118 (49.15%), Query Frame = 1 

Query: 1   MEANKRKLRGFMKGKLMPFYK----------QYNGSKTKQT------GLVGYVFHRECYS 60
           ME+N+++  GFMKGKLMPFY+          QY+    K +       +V +  H + Y 
Sbjct: 1   MESNRKRRVGFMKGKLMPFYRSPKPTTTNVNQYSSKVIKPSQSSSTYNVVHHHHHHQDYI 60

Query: 61  SVSSQHNIALLVQDNPSRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFK 103
               +  ++ +V    + +       LSQ D  YGI  DE VDV+ A YISS   RFK
Sbjct: 61  IAPPKQKVSFVVP--AAAENNRADKLLSQLDKLYGISVDESVDVRTATYISSVQERFK 116

[Close]
BLAST of MELO3C014892 vs. NCBI nr
Match: gi|700209701|gb|KGN64797.1| (hypothetical protein Csa_1G097750 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 1.3e-55
Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 1 

Query: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSSQHNIALLVQDNP 60
           MEANKRKLRGFM+GKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVS QHNI LLVQD+P
Sbjct: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVS-QHNIGLLVQDDP 60

Query: 61  SRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPH 120
            RDTTATR SLSQ D SYGI+ADEGVDVKAANYISSTLARFKSLNELPHPIE+SSIPLPH
Sbjct: 61  GRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPH 120

Query: 121 Q 122
           Q
Sbjct: 121 Q 120

[Close]
BLAST of MELO3C014892 vs. NCBI nr
Match: gi|802539270|ref|XP_012070196.1| (PREDICTED: uncharacterized protein LOC105632422 [Jatropha curcas])

HSP 1 Score: 72.8 bits (177), Expect = 4.7e-10
Identity = 47/115 (40.87%), Postives = 63/115 (54.78%), Query Frame = 1 

Query: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQ-------------TGLVGYVFHRECYSSVS 60
           ME+N RK RGFMKGKL+PFY+    + T Q                VG+V H++ Y    
Sbjct: 1   MESN-RKRRGFMKGKLIPFYRSSKATSTVQYSSKVKPSQSSPSAASVGFVVHQD-YIITP 60

Query: 61  SQHNIALLVQDNPSRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFK 103
            +  ++ +V   P+ D+   +  LSQ D  YG+  DEGVD+KAA YISS   RFK
Sbjct: 61  PKQKVSFIV---PTADSNRDK-YLSQFDKLYGVAGDEGVDIKAATYISSVQERFK 109

[Close]
BLAST of MELO3C014892 vs. NCBI nr
Match: gi|590647478|ref|XP_007031912.1| (Uncharacterized protein TCM_017245 [Theobroma cacao])

HSP 1 Score: 63.5 bits (153), Expect = 2.9e-07
Identity = 42/112 (37.50%), Postives = 57/112 (50.89%), Query Frame = 1 

Query: 4   NKRKLRGFMKGKLMPFYK---------QYN----GSKTKQTGLVGYVFHRECYSSVSSQH 63
           + RK RGF+KGKL PFY+         QY      ++T  T  V +  H++   S   Q 
Sbjct: 5   SNRKRRGFIKGKLAPFYRAAKPAAAAMQYTTKVMPNQTSTTASVSFRVHQDYMVSQPKQV 64

Query: 64  NIALLVQDNPSRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFK 103
           +  L    N        R +LSQ D+ +G+  DE VD+KAA+YISS   RFK
Sbjct: 65  SFILPADKN--------RENLSQIDNFFGVAGDESVDIKAASYISSVQERFK 108

[Close]
BLAST of MELO3C014892 vs. NCBI nr
Match: gi|823127868|ref|XP_012440416.1| (PREDICTED: uncharacterized protein LOC105765726 [Gossypium raimondii])

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-07
Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = 1 

Query: 1   MEANKRKLRGFMKGKLMPFYKQY---------NGSKTKQ----TGLVGYVFHRECYSSVS 60
           M++N RK RGF+KGKL P Y+           N +K  Q    T  VG+  HR+    +S
Sbjct: 1   MDSN-RKGRGFIKGKLAPLYRAVKPTAAVQCTNKAKPNQGSSTTASVGFRVHRDYM--IS 60

Query: 61  SQHNIALLVQDNPSRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNEL 108
               I+ +V  + +R+      +L+Q D+ +G+V DE VD+KAA YISS   RFK   +L
Sbjct: 61  QPKKISFVVPADKNRE------NLNQIDNFFGVVGDESVDIKAATYISSVRERFKLEKQL 111

[Close]
BLAST of MELO3C014892 vs. NCBI nr
Match: gi|255536861|ref|XP_002509497.1| (PREDICTED: uncharacterized protein LOC8271432 [Ricinus communis])

HSP 1 Score: 62.4 bits (150), Expect = 6.4e-07
Identity = 41/118 (34.75%), Postives = 58/118 (49.15%), Query Frame = 1 

Query: 1   MEANKRKLRGFMKGKLMPFYK----------QYNGSKTKQT------GLVGYVFHRECYS 60
           ME+N+++  GFMKGKLMPFY+          QY+    K +       +V +  H + Y 
Sbjct: 1   MESNRKRRVGFMKGKLMPFYRSPKPTTTNVNQYSSKVIKPSQSSSTYNVVHHHHHHQDYI 60

Query: 61  SVSSQHNIALLVQDNPSRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFK 103
               +  ++ +V    + +       LSQ D  YGI  DE VDV+ A YISS   RFK
Sbjct: 61  IAPPKQKVSFVVP--AAAENNRADKLLSQLDKLYGISVDESVDVRTATYISSVQERFK 116

The following BLAST results are available for this feature:
BLAST of MELO3C014892 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVE7_CUCSA8.8e-5691.74Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097750 PE=4 SV=1[more]
A0A067LN74_JATCU3.3e-1040.87Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10105 PE=4 SV=1[more]
A0A061EDX7_THECC2.0e-0737.50Uncharacterized protein OS=Theobroma cacao GN=TCM_017245 PE=4 SV=1[more]
A0A0D2Q4X1_GOSRA2.6e-0737.50Uncharacterized protein OS=Gossypium raimondii GN=B456_001G272900 PE=4 SV=1[more]
B9RBG3_RICCO4.4e-0734.75Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1676450 PE=4 SV=1[more]
BLAST of MELO3C014892 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209701|gb|KGN64797.1|1.3e-5591.74hypothetical protein Csa_1G097750 [Cucumis sativus][more]
gi|802539270|ref|XP_012070196.1|4.7e-1040.87PREDICTED: uncharacterized protein LOC105632422 [Jatropha curcas][more]
gi|590647478|ref|XP_007031912.1|2.9e-0737.50Uncharacterized protein TCM_017245 [Theobroma cacao][more]
gi|823127868|ref|XP_012440416.1|3.7e-0737.50PREDICTED: uncharacterized protein LOC105765726 [Gossypium raimondii][more]
gi|255536861|ref|XP_002509497.1|6.4e-0734.75PREDICTED: uncharacterized protein LOC8271432 [Ricinus communis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU47334melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014892T1MELO3C014892T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU47334MU47334transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C014892Cla004079Watermelon (97103) v1mewmB462
MELO3C014892ClCG05G013580Watermelon (Charleston Gray)mewcgB427
MELO3C014892Cla97C05G095110Watermelon (97103) v2mewmbB434
MELO3C014892Bhi01G001615Wax gourdmewgoB532
MELO3C014892CSPI03G25480Wild cucumber (PI 183967)cpimeB244
MELO3C014892Cucsa.054080Cucumber (Gy14) v1cgymeB037
MELO3C014892CmaCh11G015100Cucurbita maxima (Rimu)cmameB137
MELO3C014892CmoCh11G016110Cucurbita moschata (Rifu)cmomeB129
MELO3C014892Cp4.1LG04g06000Cucurbita pepo (Zucchini)cpemeB640
MELO3C014892CsGy3G023910Cucumber (Gy14) v2cgybmeB213
MELO3C014892Carg15557Silver-seed gourdcarmeB0373
MELO3C014892CsaV3_3G026960Cucumber (Chinese Long) v3cucmeB250
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C014892Silver-seed gourdcarmeB0444
MELO3C014892Cucumber (Chinese Long) v3cucmeB084
MELO3C014892Watermelon (97103) v2mewmbB446
MELO3C014892Melon (DHL92) v3.5.1memeB112
MELO3C014892Cucurbita maxima (Rimu)cmameB237
MELO3C014892Cucurbita moschata (Rifu)cmomeB225
MELO3C014892Wild cucumber (PI 183967)cpimeB079
MELO3C014892Cucumber (Chinese Long) v2cumeB078
MELO3C014892Cucumber (Chinese Long) v2cumeB245
MELO3C014892Watermelon (Charleston Gray)mewcgB439
MELO3C014892Watermelon (97103) v1mewmB485
MELO3C014892Cucurbita pepo (Zucchini)cpemeB582
MELO3C014892Bottle gourd (USVL1VR-Ls)lsimeB421
MELO3C014892Bottle gourd (USVL1VR-Ls)lsimeB443