Cla97C05G095110 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G095110
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Unknown protein
Location	Cla97Chr05 : 18424399 .. 18424734 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCAAACAGTAAAAAACTCAGAGGCTTCATGAGAGGGAAGTTGAAGCCTTTCTACAAGCAATACAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTTCATAGGGACTACAGTAATATTTCTCAACACAACATTGCTTTACTTGTGCAGGATAACCCCGAACGGGACACGACCACGGCTCGTGACTCGTTAACTCAATTTGATCGTTTGTATGGAATCGTAGCTGACGAAGGTGTTGATGTAAAGGCTGCAAATTATATTTCCTCCACGCTAGCACGGTTCAAAGGCTCAAATGAGTTAACTCTGAACCGAGAGATTTAA

mRNA sequence

ATGGAGGCAAACAGTAAAAAACTCAGAGGCTTCATGAGAGGGAAGTTGAAGCCTTTCTACAAGCAATACAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTTCATAGGGACTACAGTAATATTTCTCAACACAACATTGCTTTACTTGTGCAGGATAACCCCGAACGGGACACGACCACGGCTCGTGACTCGTTAACTCAATTTGATCGTTTGTATGGAATCGTAGCTGACGAAGGTGTTGATGTAAAGGCTGCAAATTATATTTCCTCCACGCTAGCACGGTTCAAAGGCTCAAATGAGTTAACTCTGAACCGAGAGATTTAA

Coding sequence (CDS)

ATGGAGGCAAACAGTAAAAAACTCAGAGGCTTCATGAGAGGGAAGTTGAAGCCTTTCTACAAGCAATACAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTTCATAGGGACTACAGTAATATTTCTCAACACAACATTGCTTTACTTGTGCAGGATAACCCCGAACGGGACACGACCACGGCTCGTGACTCGTTAACTCAATTTGATCGTTTGTATGGAATCGTAGCTGACGAAGGTGTTGATGTAAAGGCTGCAAATTATATTTCCTCCACGCTAGCACGGTTCAAAGGCTCAAATGAGTTAACTCTGAACCGAGAGATTTAA

Protein sequence

MEANSKKLRGFMRGKLKPFYKQYNGSKTKQTGLVGYVFHRDYSNISQHNIALLVQDNPERDTTTARDSLTQFDRLYGIVADEGVDVKAANYISSTLARFKGSNELTLNREI

Homology

[Close]

BLAST of Cla97C05G095110 vs. NCBI nr
Match: KGN64797.1 (hypothetical protein Csa_1G097750 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 6.3e-42
Identity = 89/106 (83.96%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   MEANSKKLRGFMRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSNISQHNIALLVQDNPE 60
           MEAN +KLRGFMRGKL PFYKQYNGSKTKQTGLVGYVFHR+ YS++SQHNI LLVQD+P 
Sbjct: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG 60

Query: 61  RDTTTARDSLTQFDRLYGIVADEGVDVKAANYISSTLARFKGSNEL 106
           RDTT  RDSL+QFDR YGI+ADEGVDVKAANYISSTLARFK  NEL
Sbjct: 61  RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNEL 106

[Close]

BLAST of Cla97C05G095110 vs. NCBI nr
Match: XP_021648774.1 (uncharacterized protein LOC110641383 [Hevea brasiliensis])

HSP 1 Score: 80.5 bits (197), Expect = 4.0e-12
Identity = 49/118 (41.53%), Postives = 69/118 (58.47%), Query Frame = 0


Query: 1   MEANSKKLRGFMRGKLKPFYK---------QYNGSK-------TKQTGLVGYVFHRDY-- 60
           ME+N K+ RGFM+GKL PFY+         QY  SK       +  T  VG+  H+DY  
Sbjct: 1   MESNRKR-RGFMKGKLMPFYRSPKPSSSNLQYTSSKVIKPSQSSPSTPSVGFFVHQDYII 60

Query: 61  SNISQHNIALLVQDNPERDTTTARDSLTQFDRLYGIVADEGVDVKAANYISSTLARFK 101
           +   Q+ ++ ++   P+ +    RD LTQFD++YG+  DE VD+KAA+YISS   RFK
Sbjct: 61  APPKQNKVSFIIPPAPDSN----RDKLTQFDKVYGVPGDESVDIKAASYISSVQERFK 113

[Close]

BLAST of Cla97C05G095110 vs. NCBI nr
Match: XP_023921969.1 (uncharacterized protein LOC112033429 [Quercus suber] >POE98543.1 hypothetical protein CFP56_44788 [Quercus suber])

HSP 1 Score: 78.2 bits (191), Expect = 2.0e-11
Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 0


Query: 1   MEANSKKLRGFMRGKLKPFYKQYNGSKTKQ-------------TGLVGYVFHRDYSNISQ 60
           MEAN  K RGF++GKL PFY+    S T Q             T  V ++ H+DY   +Q
Sbjct: 1   MEANRGKRRGFVKGKLMPFYRAAKPSSTVQYTTKVKPSQSSPSTASVEFLVHQDYYVFAQ 60

Query: 61  --HNIALLVQDNPERDTTTARDSLTQFDRLYGIVADEGVDVKAANYISSTLARFK 101
               +A +VQDN       +RD ++ +D LYG+  DE VD KAA+YISS   RFK
Sbjct: 61  PKQKVAFIVQDN-------SRDLISPYDNLYGMPGDESVDTKAASYISSVQERFK 108

[Close]

BLAST of Cla97C05G095110 vs. NCBI nr
Match: XP_012070196.1 (uncharacterized protein LOC105632422 [Jatropha curcas] >KDP46265.1 hypothetical protein JCGZ_10105 [Jatropha curcas])

HSP 1 Score: 74.7 bits (182), Expect = 2.2e-10
Identity = 49/115 (42.61%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 1   MEANSKKLRGFMRGKLKPFYKQYNGSKTKQ-------------TGLVGYVFHRDY-SNIS 60
           ME+N K+ RGFM+GKL PFY+    + T Q                VG+V H+DY     
Sbjct: 1   MESNRKR-RGFMKGKLIPFYRSSKATSTVQYSSKVKPSQSSPSAASVGFVVHQDYIITPP 60

Query: 61  QHNIALLVQDNPERDTTTARDS-LTQFDRLYGIVADEGVDVKAANYISSTLARFK 101
           +  ++ +V   P  D+   RD  L+QFD+LYG+  DEGVD+KAA YISS   RFK
Sbjct: 61  KQKVSFIV---PTADSN--RDKYLSQFDKLYGVAGDEGVDIKAATYISSVQERFK 109

[Close]

BLAST of Cla97C05G095110 vs. NCBI nr
Match: XP_021599840.1 (uncharacterized protein LOC110605528 [Manihot esculenta] >OAY25531.1 hypothetical protein MANES_17G102100 [Manihot esculenta])

HSP 1 Score: 72.0 bits (175), Expect = 1.4e-09
Identity = 45/117 (38.46%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 1   MEANSKKLRGFMRGKLKPFYK---------QYNGSKTKQTGL------VGYVFHRDY--S 60
           ME+N K+ RGFM+GKL PFY+         QY     K +        VG+  H+DY  +
Sbjct: 1   MESNRKR-RGFMKGKLMPFYRSPKSSSSNLQYTSKVIKPSQASPSAPSVGFYVHQDYIIA 60

Query: 61  NISQHNIALLVQDNPERDTTTARDSLTQFDRLYGIVADEGVDVKAANYISSTLARFK 101
              Q+ ++ ++   P+ +    R+ L QFD++YG+  DE VD+KAA+YISS   RFK
Sbjct: 61  PPKQNKVSFIIAPPPDGN----RERLAQFDKVYGLPGDESVDIKAASYISSVQERFK 112

[Close]

BLAST of Cla97C05G095110 vs. TrEMBL
Match: tr|A0A0A0LVE7|A0A0A0LVE7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.2e-42
Identity = 89/106 (83.96%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   MEANSKKLRGFMRGKLKPFYKQYNGSKTKQTGLVGYVFHRD-YSNISQHNIALLVQDNPE 60
           MEAN +KLRGFMRGKL PFYKQYNGSKTKQTGLVGYVFHR+ YS++SQHNI LLVQD+P 
Sbjct: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG 60

Query: 61  RDTTTARDSLTQFDRLYGIVADEGVDVKAANYISSTLARFKGSNEL 106
           RDTT  RDSL+QFDR YGI+ADEGVDVKAANYISSTLARFK  NEL
Sbjct: 61  RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNEL 106

[Close]

BLAST of Cla97C05G095110 vs. TrEMBL
Match: tr|A0A2P4KZU7|A0A2P4KZU7_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_44788 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11
Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 0


Query: 1   MEANSKKLRGFMRGKLKPFYKQYNGSKTKQ-------------TGLVGYVFHRDYSNISQ 60
           MEAN  K RGF++GKL PFY+    S T Q             T  V ++ H+DY   +Q
Sbjct: 1   MEANRGKRRGFVKGKLMPFYRAAKPSSTVQYTTKVKPSQSSPSTASVEFLVHQDYYVFAQ 60

Query: 61  --HNIALLVQDNPERDTTTARDSLTQFDRLYGIVADEGVDVKAANYISSTLARFK 101
               +A +VQDN       +RD ++ +D LYG+  DE VD KAA+YISS   RFK
Sbjct: 61  PKQKVAFIVQDN-------SRDLISPYDNLYGMPGDESVDTKAASYISSVQERFK 108

[Close]

BLAST of Cla97C05G095110 vs. TrEMBL
Match: tr|A0A067LN74|A0A067LN74_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-10
Identity = 49/115 (42.61%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 1   MEANSKKLRGFMRGKLKPFYKQYNGSKTKQ-------------TGLVGYVFHRDY-SNIS 60
           ME+N K+ RGFM+GKL PFY+    + T Q                VG+V H+DY     
Sbjct: 1   MESNRKR-RGFMKGKLIPFYRSSKATSTVQYSSKVKPSQSSPSAASVGFVVHQDYIITPP 60

Query: 61  QHNIALLVQDNPERDTTTARDS-LTQFDRLYGIVADEGVDVKAANYISSTLARFK 101
           +  ++ +V   P  D+   RD  L+QFD+LYG+  DEGVD+KAA YISS   RFK
Sbjct: 61  KQKVSFIV---PTADSN--RDKYLSQFDKLYGVAGDEGVDIKAATYISSVQERFK 109

[Close]

BLAST of Cla97C05G095110 vs. TrEMBL
Match: tr|A0A2C9U7Q7|A0A2C9U7Q7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G102100 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.4e-10
Identity = 45/117 (38.46%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 1   MEANSKKLRGFMRGKLKPFYK---------QYNGSKTKQTGL------VGYVFHRDY--S 60
           ME+N K+ RGFM+GKL PFY+         QY     K +        VG+  H+DY  +
Sbjct: 1   MESNRKR-RGFMKGKLMPFYRSPKSSSSNLQYTSKVIKPSQASPSAPSVGFYVHQDYIIA 60

Query: 61  NISQHNIALLVQDNPERDTTTARDSLTQFDRLYGIVADEGVDVKAANYISSTLARFK 101
              Q+ ++ ++   P+ +    R+ L QFD++YG+  DE VD+KAA+YISS   RFK
Sbjct: 61  PPKQNKVSFIIAPPPDGN----RERLAQFDKVYGLPGDESVDIKAASYISSVQERFK 112

[Close]

BLAST of Cla97C05G095110 vs. TrEMBL
Match: tr|A0A2I4E7Q1|A0A2I4E7Q1_9ROSI (uncharacterized protein LOC108987043 OS=Juglans regia OX=51240 GN=LOC108987043 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.7e-09
Identity = 49/119 (41.18%), Postives = 67/119 (56.30%), Query Frame = 0


Query: 1   MEANSKKLRGFMRGKLKPFYK---------QYNGSKTK------QTGLVGYVFHRDY--S 60
           MEAN +KLRGF++GKL PF++         QY  SK K       T  +G+V H+DY  +
Sbjct: 1   MEAN-RKLRGFVKGKLMPFHRSATKPSSTVQYISSKIKPNQSSPSTAPLGFVVHQDYAVA 60

Query: 61  NISQHNIALLVQDNPERDTTTARD--SLTQFDRLYGIVADEGVDVKAANYISSTLARFK 101
              Q  ++ +V   P       RD   L++++ LYG+ ADE VD+KAA YISS   RFK
Sbjct: 61  QPKQKAVSFIV---PPDHNMINRDLVVLSKYENLYGLAADESVDMKAATYISSVQERFK 115

The following BLAST results are available for this feature:

BLAST of Cla97C05G095110 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64797.1	6.3e-42	83.96	hypothetical protein Csa_1G097750 [Cucumis sativus]	[more]
XP_021648774.1	4.0e-12	41.53	uncharacterized protein LOC110641383 [Hevea brasiliensis]	[more]
XP_023921969.1	2.0e-11	41.74	uncharacterized protein LOC112033429 [Quercus suber] >POE98543.1 hypothetical pr...	[more]
XP_012070196.1	2.2e-10	42.61	uncharacterized protein LOC105632422 [Jatropha curcas] >KDP46265.1 hypothetical ...	[more]
XP_021599840.1	1.4e-09	38.46	uncharacterized protein LOC110605528 [Manihot esculenta] >OAY25531.1 hypothetica...	[more]

BLAST of Cla97C05G095110 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LVE7\|A0A0A0LVE7_CUCSA	4.2e-42	83.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1	[more]
tr\|A0A2P4KZU7\|A0A2P4KZU7_QUESU	1.3e-11	41.74	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_44788 PE=4 SV=1	[more]
tr\|A0A067LN74\|A0A067LN74_JATCU	1.5e-10	42.61	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1	[more]
tr\|A0A2C9U7Q7\|A0A2C9U7Q7_MANES	9.4e-10	38.46	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G102100 PE=4 SV=...	[more]
tr\|A0A2I4E7Q1\|A0A2I4E7Q1_9ROSI	4.7e-09	41.18	uncharacterized protein LOC108987043 OS=Juglans regia OX=51240 GN=LOC108987043 P...	[more]

BLAST of Cla97C05G095110 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C05G095110 vs. TAIR10


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G095110.1	Cla97C05G095110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36030	FAMILY NOT NAMED	coord: 1..102

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G095110	Cla004079	Watermelon (97103) v1	wmwmbB207
Cla97C05G095110	MELO3C014892	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G095110	ClCG05G013580	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G095110	CSPI03G25480	Wild cucumber (PI 183967)	cpiwmbB223
Cla97C05G095110	Cucsa.054080	Cucumber (Gy14) v1	cgywmbB041
Cla97C05G095110	CmaCh11G015100	Cucurbita maxima (Rimu)	cmawmbB123
Cla97C05G095110	CmoCh11G016110	Cucurbita moschata (Rifu)	cmowmbB114
Cla97C05G095110	CsGy3G023910	Cucumber (Gy14) v2	cgybwmbB208
Cla97C05G095110	MELO3C014892.2	Melon (DHL92) v3.6.1	medwmbB429
Cla97C05G095110	Carg15557	Silver-seed gourd	carwmbB0387
Cla97C05G095110	CsaV3_3G026960	Cucumber (Chinese Long) v3	cucwmbB219
Cla97C05G095110	Bhi01G001615	Wax gourd	wgowmbB181

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G095110	Watermelon (97103) v2	wmbwmbB134
Cla97C05G095110	Silver-seed gourd	carwmbB0381
Cla97C05G095110	Silver-seed gourd	carwmbB0459
Cla97C05G095110	Cucumber (Gy14) v2	cgybwmbB062
Cla97C05G095110	Cucurbita maxima (Rimu)	cmawmbB077
Cla97C05G095110	Cucurbita maxima (Rimu)	cmawmbB130
Cla97C05G095110	Cucurbita maxima (Rimu)	cmawmbB260
Cla97C05G095110	Cucurbita moschata (Rifu)	cmowmbB066
Cla97C05G095110	Cucurbita moschata (Rifu)	cmowmbB116
Cla97C05G095110	Cucurbita moschata (Rifu)	cmowmbB240
Cla97C05G095110	Wild cucumber (PI 183967)	cpiwmbB065
Cla97C05G095110	Cucumber (Chinese Long) v3	cucwmbB061
Cla97C05G095110	Cucumber (Chinese Long) v2	cuwmbB063
Cla97C05G095110	Cucumber (Chinese Long) v2	cuwmbB217
Cla97C05G095110	Bottle gourd (USVL1VR-Ls)	lsiwmbB371
Cla97C05G095110	Bottle gourd (USVL1VR-Ls)	lsiwmbB401
Cla97C05G095110	Melon (DHL92) v3.6.1	medwmbB245
Cla97C05G095110	Melon (DHL92) v3.5.1	mewmbB258
Cla97C05G095110	Watermelon (Charleston Gray)	wcgwmbB267
Cla97C05G095110	Watermelon (97103) v1	wmwmbB401