MELO3C014103 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C014103
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNuclear transcription factor Y subunit B-3
Locationchr6 : 31726728 .. 31727189 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGACTCCGACAACGACTCCGGCGGTGGTTACCAGAAATCCCCATCTCCACGTGAACACGACAGACTCCTCCCGATCGCCAACGTCGGCCGGATCATGAAGAAAGCTCTCCCTGGTAACGCCAAGATCTCAAAAGACGCCAAAGAAACCGTTCAAGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCGGTGAAGCATCCGACAAGTGCCATAACGAGAAACGAAAAACTATCAACGGCGACGATTTGCTCTGGGCCATGGCTACCTTAGGGTTCGAAGACTATGTGGATCCTCTCAAGCTTTATCTCCAACGGTTTCGAGAAATTGAAGGCGAGAGGACAACGCTTGCCTCACGTGACTCCGCCGCCTCCTCCGCTCCGAACTCCGCCGCAGCGGGGAATAGTGGGTTTTTCGACGGCGGTGGGGAATTTGGGGGTGGGATGAAGGGATGGGGATGA

mRNA sequence

ATGGCGGACTCCGACAACGACTCCGGCGGTGGTTACCAGAAATCCCCATCTCCACGTGAACACGACAGACTCCTCCCGATCGCCAACGTCGGCCGGATCATGAAGAAAGCTCTCCCTGGTAACGCCAAGATCTCAAAAGACGCCAAAGAAACCGTTCAAGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCGGTGAAGCATCCGACAAGTGCCATAACGAGAAACGAAAAACTATCAACGGCGACGATTTGCTCTGGGCCATGGCTACCTTAGGGTTCGAAGACTATGTGGATCCTCTCAAGCTTTATCTCCAACGGTTTCGAGAAATTGAAGGCGAGAGGACAACGCTTGCCTCACGTGACTCCGCCGCCTCCTCCGCTCCGAACTCCGCCGCAGCGGGGAATAGTGGGTTTTTCGACGGCGGTGGGGAATTTGGGGGTGGGATGAAGGGATGGGGATGA

Coding sequence (CDS)

ATGGCGGACTCCGACAACGACTCCGGCGGTGGTTACCAGAAATCCCCATCTCCACGTGAACACGACAGACTCCTCCCGATCGCCAACGTCGGCCGGATCATGAAGAAAGCTCTCCCTGGTAACGCCAAGATCTCAAAAGACGCCAAAGAAACCGTTCAAGAATGCGTCTCCGAGTTCATCAGCTTCGTCACCGGTGAAGCATCCGACAAGTGCCATAACGAGAAACGAAAAACTATCAACGGCGACGATTTGCTCTGGGCCATGGCTACCTTAGGGTTCGAAGACTATGTGGATCCTCTCAAGCTTTATCTCCAACGGTTTCGAGAAATTGAAGGCGAGAGGACAACGCTTGCCTCACGTGACTCCGCCGCCTCCTCCGCTCCGAACTCCGCCGCAGCGGGGAATAGTGGGTTTTTCGACGGCGGTGGGGAATTTGGGGGTGGGATGAAGGGATGGGGATGA

Protein sequence

MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASRDSAASSAPNSAAAGNSGFFDGGGEFGGGMKGWG*
Homology
[Close]
BLAST of MELO3C014103 vs. Swiss-Prot
Match: NFYB2_ARATH (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana GN=NFYB2 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.2e-52
Identity = 111/158 (70.25%), Postives = 116/158 (73.42%), Query Frame = 1 

Query: 1   MADSDNDSGGGY-------QKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQ 60
           M DSD DSGGG        Q S SPRE DR LPIANV RIMKKALP NAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGE 120
           ECVSEFISFVTGEASDKC  EKRKTINGDDLLWAM TLGFEDYV+PLK+YLQRFREIEGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 RTTLASRDSAASSAPNSA-AAGNSGFFDGGGEFGGGMK 151
           RT L    +      +   A G+ G F GG   GGGM+
Sbjct: 121 RTGLGRPQTGGEVGEHQRDAVGDGGGFYGG---GGGMQ 155

[Close]
BLAST of MELO3C014103 vs. Swiss-Prot
Match: NFYB3_ARATH (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana GN=NFYB3 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.8e-51
Identity = 104/150 (69.33%), Postives = 112/150 (74.67%), Query Frame = 1 

Query: 1   MADSDNDSGGGYQK-SPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEF 60
           MADSDNDSGG     + S RE DR LPIANV RIMKKALP NAKISKDAKETVQECVSEF
Sbjct: 1   MADSDNDSGGHKDGGNASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEF 60

Query: 61  ISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLAS 120
           ISF+TGEASDKC  EKRKTINGDDLLWAM TLGFEDYV+PLK+YLQ++RE+EGE+TT A 
Sbjct: 61  ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAG 120

Query: 121 RDSAASSAPNSAAAGNSGFFDGGGEFGGGM 150
           R            AG+     G   +GGGM
Sbjct: 121 RQGDKEGGGGGGGAGSGS--GGAPMYGGGM 148

[Close]
BLAST of MELO3C014103 vs. Swiss-Prot
Match: NFYB_MAIZE (Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-43
Identity = 92/162 (56.79%), Postives = 109/162 (67.28%), Query Frame = 1 

Query: 2   ADSDNDSGGGYQKSPSPR---------EHDRLLPIANVGRIMKKALPGNAKISKDAKETV 61
           A +    GGG  +S SPR         E DR LPIAN+ RIMKKA+P N KI+KDAKETV
Sbjct: 4   APASPGGGGGSHESGSPRGGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKDAKETV 63

Query: 62  QECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEG 121
           QECVSEFISF+T EASDKC  EKRKTINGDDLLWAMATLGFEDY++PLK+YLQ++RE+EG
Sbjct: 64  QECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEG 123

Query: 122 E-RTTLASRDSAASSAPNSAAAGNSGFFDGGGEFGGGMKGWG 154
           + + T  S D +           +S   +G G+ G   +G G
Sbjct: 124 DSKLTAKSSDGSIKKDALGHVGASSSAAEGMGQQGAYNQGMG 165

[Close]
BLAST of MELO3C014103 vs. Swiss-Prot
Match: NFYB3_ORYSJ (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-42
Identity = 87/146 (59.59%), Postives = 103/146 (70.55%), Query Frame = 1 

Query: 9   GGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEAS 68
           GGG       RE DR LPIAN+ RIMKKA+P N KI+KDAKETVQECVSEFISF+T EAS
Sbjct: 27  GGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEAS 86

Query: 69  DKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGE-RTTLASRDSAASSA 128
           DKC  EKRKTINGDDLLWAMATLGFEDY++PLK+YLQ++RE+EG+ + T  + D +    
Sbjct: 87  DKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKD 146

Query: 129 PNSAAAGNSGFFDGGGEFGGGMKGWG 154
              +  G+S    G G+     +G G
Sbjct: 147 VLGSHGGSSSSAQGMGQQAAYNQGMG 172

[Close]
BLAST of MELO3C014103 vs. Swiss-Prot
Match: NFYB1_ARATH (Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana GN=NFYB1 PE=1 SV=2)

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-41
Identity = 90/154 (58.44%), Postives = 104/154 (67.53%), Query Frame = 1 

Query: 1   MADSDND-SGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEF 60
           MAD+ +  +G G +   S RE DR LPIAN+ RIMKKALP N KI KDAK+TVQECVSEF
Sbjct: 1   MADTPSSPAGDGGESGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEF 60

Query: 61  ISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLAS 120
           ISF+T EASDKC  EKRKT+NGDDLLWAMATLGFEDY++PLK+YL R+RE+EG+      
Sbjct: 61  ISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDN----- 120

Query: 121 RDSAASSAPNSAAAGNSGFFD-GGGEFGGGMKGW 153
                     S  +G+    D GGG  G  M  W
Sbjct: 121 --------KGSGKSGDGSNRDAGGGVSGEEMPSW 141

[Close]
BLAST of MELO3C014103 vs. TrEMBL
Match: A0A0A0L4U4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G047800 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 9.7e-76
Identity = 148/154 (96.10%), Postives = 148/154 (96.10%), Query Frame = 1 

Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI
Sbjct: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR
Sbjct: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120

Query: 121 DSAASSAPNSAAAGNSGFFDGGGEFGG-GMKGWG 154
           DS ASSA NSAAAGNSGFFDGGGEFGG G  G G
Sbjct: 121 DS-ASSAANSAAAGNSGFFDGGGEFGGAGGSGMG 153

[Close]
BLAST of MELO3C014103 vs. TrEMBL
Match: M5WHU0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011714mg PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.3e-53
Identity = 110/152 (72.37%), Postives = 124/152 (81.58%), Query Frame = 1 

Query: 1   MADSDNDSGGGYQKSPS---PREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVS 60
           MADSDNDSGG + KS S   PRE DRLLPIANV RIMKKALP NAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGAHTKSNSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTL 120
           EFISF+TGEASDKC  EKRKTINGDDLLWAM TLGFE+YV+PLK+YLQRFRE+EGE++++
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKSSV 120

Query: 121 ASRDSAASSAPNSAAAGNSGFFDGGGEFGGGM 150
           A+RD  AS    +   G  G+  GGG  G G+
Sbjct: 121 AARDKDASGGGGN---GGVGYESGGGSGGAGV 149

[Close]
BLAST of MELO3C014103 vs. TrEMBL
Match: A0A022QLU9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a022879mg PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 6.7e-53
Identity = 108/148 (72.97%), Postives = 119/148 (80.41%), Query Frame = 1 

Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGG    + S RE DR LPIANV RIMKKALP NAKISKDAKETVQECVSEFI
Sbjct: 1   MADSDNDSGGHSNSNASSREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKC  EKRKTINGDDLLWAM TLGFEDYVDPLK+YL ++REIEGE+T++A+ 
Sbjct: 61  SFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKVYLAKYREIEGEKTSVAAV 120

Query: 121 DSAASSAPNSAAAGNSGFFDGGGEFGGG 149
             AA     SA     G ++GGG +GGG
Sbjct: 121 KDAAGG--GSAVTSGGGGYNGGGIYGGG 146

[Close]
BLAST of MELO3C014103 vs. TrEMBL
Match: A0A022PN77_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021836mg PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.5e-52
Identity = 107/148 (72.30%), Postives = 119/148 (80.41%), Query Frame = 1 

Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGG    + S RE DR LPIANV RIMKKALP NAKISKDAKETVQECVSEFI
Sbjct: 1   MADSDNDSGGHSNSNASSREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKC  EKRKTINGDDLLWAM TLGFEDYVDPLK+YL ++REIEGE+T++++ 
Sbjct: 61  SFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKVYLAKYREIEGEKTSVSAV 120

Query: 121 DSAASSAPNSAAAGNSGFFDGGGEFGGG 149
             AA     SA     G ++GGG +GGG
Sbjct: 121 KDAAGG--GSAVTSGGGGYNGGGIYGGG 146

[Close]
BLAST of MELO3C014103 vs. TrEMBL
Match: S8E0D9_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_05641 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-52
Identity = 107/153 (69.93%), Postives = 120/153 (78.43%), Query Frame = 1 

Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDN+SGGG + S SPRE DR LPIANV RIMKKALP NAKISKDAKETVQECVSEFI
Sbjct: 1   MADSDNESGGGNRDSTSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SF+TGEASDKC  EKRKTINGDDLLWAM TLGFEDYV+PLK+YLQRFR++EGE++ +A R
Sbjct: 61  SFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFRDLEGEKSAVAVR 120

Query: 121 DSAASSAPNSAAAGNSGFFDGGGEFGGGMKGWG 154
               SS+             GGG + GG+ G G
Sbjct: 121 GQKDSSSGGG----------GGGSYDGGIYGMG 143

[Close]
BLAST of MELO3C014103 vs. TAIR10
Match: AT5G47640.1 (AT5G47640.1 nuclear factor Y, subunit B2)

HSP 1 Score: 206.5 bits (524), Expect = 1.2e-53
Identity = 111/158 (70.25%), Postives = 116/158 (73.42%), Query Frame = 1 

Query: 1   MADSDNDSGGGY-------QKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQ 60
           M DSD DSGGG        Q S SPRE DR LPIANV RIMKKALP NAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 61  ECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGE 120
           ECVSEFISFVTGEASDKC  EKRKTINGDDLLWAM TLGFEDYV+PLK+YLQRFREIEGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 121 RTTLASRDSAASSAPNSA-AAGNSGFFDGGGEFGGGMK 151
           RT L    +      +   A G+ G F GG   GGGM+
Sbjct: 121 RTGLGRPQTGGEVGEHQRDAVGDGGGFYGG---GGGMQ 155

[Close]
BLAST of MELO3C014103 vs. TAIR10
Match: AT4G14540.1 (AT4G14540.1 nuclear factor Y, subunit B3)

HSP 1 Score: 203.4 bits (516), Expect = 1.0e-52
Identity = 104/150 (69.33%), Postives = 112/150 (74.67%), Query Frame = 1 

Query: 1   MADSDNDSGGGYQK-SPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEF 60
           MADSDNDSGG     + S RE DR LPIANV RIMKKALP NAKISKDAKETVQECVSEF
Sbjct: 1   MADSDNDSGGHKDGGNASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEF 60

Query: 61  ISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLAS 120
           ISF+TGEASDKC  EKRKTINGDDLLWAM TLGFEDYV+PLK+YLQ++RE+EGE+TT A 
Sbjct: 61  ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAG 120

Query: 121 RDSAASSAPNSAAAGNSGFFDGGGEFGGGM 150
           R            AG+     G   +GGGM
Sbjct: 121 RQGDKEGGGGGGGAGSGS--GGAPMYGGGM 148

[Close]
BLAST of MELO3C014103 vs. TAIR10
Match: AT3G53340.1 (AT3G53340.1 nuclear factor Y, subunit B10)

HSP 1 Score: 169.1 bits (427), Expect = 2.1e-42
Identity = 90/158 (56.96%), Postives = 102/158 (64.56%), Query Frame = 1 

Query: 1   MADSDNDSGGGYQ---------KSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKET 60
           MA+S    GGG           +S + RE DR LPIAN+ RIMK+ LP N KI+KDAKET
Sbjct: 1   MAESQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKET 60

Query: 61  VQECVSEFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIE 120
           +QECVSEFISFVT EASDKC  EKRKTINGDDLLWAMATLGFEDY+DPLK+YL R+RE+E
Sbjct: 61  MQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREME 120

Query: 121 GER-------TTLASRDSAASSAPNSAAAGNSGFFDGG 143
           G+         + A RD   S     +     G F  G
Sbjct: 121 GDTKGSGKGGESSAKRDGQPSQVSQFSQVPQQGSFSQG 158

[Close]
BLAST of MELO3C014103 vs. TAIR10
Match: AT2G37060.1 (AT2G37060.1 nuclear factor Y, subunit B8)

HSP 1 Score: 167.2 bits (422), Expect = 8.2e-42
Identity = 85/132 (64.39%), Postives = 98/132 (74.24%), Query Frame = 1 

Query: 6   NDSGGGYQ-KSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVT 65
           ++SGG    +S   RE DR LPIAN+ RIMK+ LP N KI+KDAKE VQECVSEFISFVT
Sbjct: 15  HESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVT 74

Query: 66  GEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASRDSAA 125
            EASDKC  EKRKTINGDDLLWAMATLGFEDY++PLK+YL R+RE+EG+     ++ SA 
Sbjct: 75  SEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGD-----TKGSAK 134

Query: 126 SSAPNSAAAGNS 137
              PN+   G S
Sbjct: 135 GGDPNAKKDGQS 141

[Close]
BLAST of MELO3C014103 vs. TAIR10
Match: AT2G13570.1 (AT2G13570.1 nuclear factor Y, subunit B7)

HSP 1 Score: 164.5 bits (415), Expect = 5.3e-41
Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 1 

Query: 19  REHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFISFVTGEASDKCHNEKRKT 78
           +E DR LPIANVGRIMKK LPGN KISKDAKETVQECVSEFISFVTGEASDKC  EKRKT
Sbjct: 35  KEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKT 94

Query: 79  INGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGER 115
           INGDD++WA+ TLGFEDYV PLK+YL ++R+ EGE+
Sbjct: 95  INGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEK 130

[Close]
BLAST of MELO3C014103 vs. NCBI nr
Match: gi|659096321|ref|XP_008449032.1| (PREDICTED: nuclear transcription factor Y subunit B-3-like [Cucumis melo])

HSP 1 Score: 303.5 bits (776), Expect = 2.1e-79
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1 

Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI
Sbjct: 64  MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 123

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR
Sbjct: 124 SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 183

Query: 121 DSAASSAPNSAAAGNSGFFDGGGEFGGGM 150
           DSAASSAPNSAAAGNSGFFDGGGEFGGGM
Sbjct: 184 DSAASSAPNSAAAGNSGFFDGGGEFGGGM 212

[Close]
BLAST of MELO3C014103 vs. NCBI nr
Match: gi|449461061|ref|XP_004148262.1| (PREDICTED: nuclear transcription factor Y subunit B-3-like [Cucumis sativus])

HSP 1 Score: 290.8 bits (743), Expect = 1.4e-75
Identity = 148/154 (96.10%), Postives = 148/154 (96.10%), Query Frame = 1 

Query: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60
           MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI
Sbjct: 1   MADSDNDSGGGYQKSPSPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEFI 60

Query: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120
           SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR
Sbjct: 61  SFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLASR 120

Query: 121 DSAASSAPNSAAAGNSGFFDGGGEFGG-GMKGWG 154
           DS ASSA NSAAAGNSGFFDGGGEFGG G  G G
Sbjct: 121 DS-ASSAANSAAAGNSGFFDGGGEFGGAGGSGMG 153

[Close]
BLAST of MELO3C014103 vs. NCBI nr
Match: gi|657969216|ref|XP_008376324.1| (PREDICTED: nuclear transcription factor Y subunit B-3-like [Malus domestica])

HSP 1 Score: 217.2 bits (552), Expect = 2.0e-53
Identity = 110/153 (71.90%), Postives = 123/153 (80.39%), Query Frame = 1 

Query: 1   MADSDNDSGGGYQKSP-SPREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVSEF 60
           MADSDNDSGG + KS  SPRE DRLLPIANV RIMKKALP NAKISKDAKETVQECVSEF
Sbjct: 1   MADSDNDSGGAHTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEF 60

Query: 61  ISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTLAS 120
           ISF+TGEASDKC  EKRKTINGDDLLWAM TLGFE+YV+PLK+YLQRFRE+EGE++++++
Sbjct: 61  ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKSSVSA 120

Query: 121 RDSAASSAPNSAAAGNSGFFDGGGEFGGGMKGW 153
           RD   S   N    G  G+  GGG  GG    W
Sbjct: 121 RDKDGSGGGN----GGVGYEGGGGSSGGAGVYW 149

[Close]
BLAST of MELO3C014103 vs. NCBI nr
Match: gi|645241630|ref|XP_008227167.1| (PREDICTED: nuclear transcription factor Y subunit B-3-like [Prunus mume])

HSP 1 Score: 216.5 bits (550), Expect = 3.3e-53
Identity = 110/152 (72.37%), Postives = 124/152 (81.58%), Query Frame = 1 

Query: 1   MADSDNDSGGGYQKSPS---PREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVS 60
           MADSDNDSGG + KS S   PRE DRLLPIANV RIMKKALP NAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGAHTKSNSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTL 120
           EFISF+TGEASDKC  EKRKTINGDDLLWAM TLGFE+YV+PLK+YLQRFRE+EGE++++
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKSSV 120

Query: 121 ASRDSAASSAPNSAAAGNSGFFDGGGEFGGGM 150
           A+RD  AS    +   G  G+  GGG  G G+
Sbjct: 121 AARDKDASGGGGN---GGVGYESGGGSGGAGV 149

[Close]
BLAST of MELO3C014103 vs. NCBI nr
Match: gi|595874123|ref|XP_007212085.1| (hypothetical protein PRUPE_ppa011714mg [Prunus persica])

HSP 1 Score: 216.5 bits (550), Expect = 3.3e-53
Identity = 110/152 (72.37%), Postives = 124/152 (81.58%), Query Frame = 1 

Query: 1   MADSDNDSGGGYQKSPS---PREHDRLLPIANVGRIMKKALPGNAKISKDAKETVQECVS 60
           MADSDNDSGG + KS S   PRE DRLLPIANV RIMKKALP NAKISKDAKETVQECVS
Sbjct: 1   MADSDNDSGGAHTKSNSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVS 60

Query: 61  EFISFVTGEASDKCHNEKRKTINGDDLLWAMATLGFEDYVDPLKLYLQRFREIEGERTTL 120
           EFISF+TGEASDKC  EKRKTINGDDLLWAM TLGFE+YV+PLK+YLQRFRE+EGE++++
Sbjct: 61  EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKSSV 120

Query: 121 ASRDSAASSAPNSAAAGNSGFFDGGGEFGGGM 150
           A+RD  AS    +   G  G+  GGG  G G+
Sbjct: 121 AARDKDASGGGGN---GGVGYESGGGSGGAGV 149

The following BLAST results are available for this feature:
BLAST of MELO3C014103 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NFYB2_ARATH2.2e-5270.25Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana GN=NFYB2 PE=2... [more]
NFYB3_ARATH1.8e-5169.33Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana GN=NFYB3 PE=2... [more]
NFYB_MAIZE1.4e-4356.79Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1[more]
NFYB3_ORYSJ1.5e-4259.59Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica GN=NF... [more]
NFYB1_ARATH1.3e-4158.44Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana GN=NFYB1 PE=1... [more]
BLAST of MELO3C014103 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4U4_CUCSA9.7e-7696.10Uncharacterized protein OS=Cucumis sativus GN=Csa_3G047800 PE=4 SV=1[more]
M5WHU0_PRUPE2.3e-5372.37Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011714mg PE=4 SV=1[more]
A0A022QLU9_ERYGU6.7e-5372.97Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a022879mg PE=4 SV=1[more]
A0A022PN77_ERYGU1.5e-5272.30Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021836mg PE=4 SV=1[more]
S8E0D9_9LAMI2.0e-5269.93Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_05641 PE=4 SV=1[more]
BLAST of MELO3C014103 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G47640.11.2e-5370.25 nuclear factor Y, subunit B2[more]
AT4G14540.11.0e-5269.33 nuclear factor Y, subunit B3[more]
AT3G53340.12.1e-4256.96 nuclear factor Y, subunit B10[more]
AT2G37060.18.2e-4264.39 nuclear factor Y, subunit B8[more]
AT2G13570.15.3e-4180.21 nuclear factor Y, subunit B7[more]
BLAST of MELO3C014103 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096321|ref|XP_008449032.1|2.1e-79100.00PREDICTED: nuclear transcription factor Y subunit B-3-like [Cucumis melo][more]
gi|449461061|ref|XP_004148262.1|1.4e-7596.10PREDICTED: nuclear transcription factor Y subunit B-3-like [Cucumis sativus][more]
gi|657969216|ref|XP_008376324.1|2.0e-5371.90PREDICTED: nuclear transcription factor Y subunit B-3-like [Malus domestica][more]
gi|645241630|ref|XP_008227167.1|3.3e-5372.37PREDICTED: nuclear transcription factor Y subunit B-3-like [Prunus mume][more]
gi|595874123|ref|XP_007212085.1|3.3e-5372.37hypothetical protein PRUPE_ppa011714mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003956Transcrpt_fac_NFYB/HAP3_CS
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0046982protein heterodimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU59386melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014103T1MELO3C014103T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU59386MU59386transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003956Transcription factor, NFYB/HAP3, conserved sitePROSITEPS00685NFYB_HAP3coord: 55..71
scor
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 24..88
score: 5.4
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 14..123
score: 9.7
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 22..133
score: 6.99
NoneNo IPR availablePRINTSPR00615CCAATSUBUNTAcoord: 90..108
score: 1.6E-20coord: 71..89
score: 1.6E-20coord: 52..70
score: 1.6
NoneNo IPR availablePANTHERPTHR11064CCAAT-BINDING TRANSCRIPTION FACTOR-RELATEDcoord: 1..144
score: 6.3
NoneNo IPR availablePANTHERPTHR11064:SF45SUBFAMILY NOT NAMEDcoord: 1..144
score: 6.3