MELO3C010270.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C010270.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic
Location	chr02 : 16124403 .. 16126587 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCATTTGGAATGTAATCAAATTAATGGGAATATGAGATTATTGGAATGGGTGAAGAATCGAGAGAGATAAGTTCAATTGAGTTTAGTACTGTAGATCAGGTTTAAAAAGCTTAATTCAAACATTATTTTTAAATTACATTACATTACAAGATAAAATCGTTATCGGTCTTCCTTACAATTATCTCTGGTTTAGAAGAAACAAAGGAAGTCAAGTAAAACTTTGAAACCAAATTGGATAAGTAAAACAAGATGGAGGAAGAAGATAAACCAGACATTACAACGCCTCTGTCTCCCATCATTTGGGATTTTTTTCATGTCCACTCCCACCATTAAACCTCCACTTCCACTTTCTCCTTCCTTTAATCACCCATCTCGCTCACCCATTTCATGGAGTTTTTCCAGACCCATTTCCCCTTCTTCCCCTATTTCCACCTCCTCTCGCCATCGACCACAACTATCCGCCTCGGTTGCCTTCAATCCTTCCGGAAATTTTGACCTCTCTTTTCAAGATGATGATGATGGTAACTCCTCAAACTTCTGCTGTTTCGATTTCTGAATTTGATTTGTACCCTTTTCGAGTTATGCATTCTCGAATTAGTTTAAATGAATTGTGAGGATTGGGGAAATTTTTTGTTTTCTATCCATCTCCATTGAATGAAATTGTGTTTGACGACTTTTTGAATTGGTATGTAGTTAATCATTCAAAGAGAATTGCTCTCTTCTTTGTTGCTTAGCTGACATTTTCTTGATGATGAATGATGAAATTCAAGTTCATTGCTGTATATTGGAGAAATGGAGAACATAAACTGTTCGGGAAGATTTTACGTACTAATGTTATCCAGTTCTTTTTTTCCCTTCAAATGGTATGGAAACCAAAGAAAAGGAAGAACAATTGTGGTGGTTATGTATGTGTGGGTGTGTATATATGTATGTATATGTAGGGACTAGGGAGTAGTTAGATGATATGATCTTCGATTTGCATGCACCCATTAGATTAAGTTTTGGGTCAATCAGTGTTTACAATGGTATCAGAGCGGATAATGTTATTTCTTCCACAACTAATATTGATTTATACTTGTTGGATCTTCGTCATATTTGAAGCCCACAAGTGAAGAGAGTGTTAAATGATACGATATTAAATTTGTCTTTGCCCTTTAACTTAAGTTCTTGTGTTAATTAGAGGTTTAAGAGGAGTTATTGAAAGTTTGATGGGTTTTAACTGTTTGTTAAGAACAGATTCTCCTAAAGTTGCACCTCCAATGCCACCCACAGAAGGTCGATTTGACGTGGTTATAGATAACGATGCAATTCGTTGTCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATTTCACCTTTAGCTAGTAAGTTTTGGGTTGGTTGGTATGTTTATGTCATTGATTTGAAATTAGTTCTGTGATCGGATCCCTGATGATTTCCCTCTCCTAGTATTGTTACAGCTGAACCAAAACAATTCCTTGAACGTACAATTGGTTTTACCATTAACTATACTCGAGAAGATCCTTACGATCGACGTGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGACTTGATTCAGTCTATCCGTGGCTACCCGTTCTGCTGGACTGGAGAGCGGGAGAGCTAGCACGGTATGCAGCAATGCTCGTTCCTCACCAGGTGATGAATTGTTATAAAAATGTTGATACTAAGGAGTGTGAGAGACTTATTTTTGGGATTCTTATGGTTGCAGATAAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGCTGTTTGTGATGAAGAAAGTTTTTATAGTGTATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAAGCAGCTAATATGGCTAGGATGCTTGGGTTTGGAATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGAAACACAGCTCTCGGAGTGCTGGTTCGACAAGTATCGATTCGAGAACTGGTATTATTTTCTAAAATTGTAATGATAGTAAACCATTCAAACTTTTCATAGCTTATACTATTGATGAATGAGTAATTTAGTTTTGAAGTCATGAGAAAATGTTTGTTAAAAAGAAAATGATATATTTATTTTCCTTCTCTTTAAAGTTACGTGCATTTTGGGGTTCTTTTTTACCCATTTGA

mRNA sequence

TTTCATTTGGAATGTAATCAAATTAATGGGAATATGAGATTATTGGAATGGGTGAAGAATCGAGAGAGATAAGTTCAATTGAGTTTAGTACTGTAGATCAGGTTTAAAAAGCTTAATTCAAACATTATTTTTAAATTACATTACATTACAAGATAAAATCGTTATCGGTCTTCCTTACAATTATCTCTGGTTTAGAAGAAACAAAGGAAGTCAAGTAAAACTTTGAAACCAAATTGGATAAGTAAAACAAGATGGAGGAAGAAGATAAACCAGACATTACAACGCCTCTGTCTCCCATCATTTGGGATTTTTTTCATGTCCACTCCCACCATTAAACCTCCACTTCCACTTTCTCCTTCCTTTAATCACCCATCTCGCTCACCCATTTCATGGAGTTTTTCCAGACCCATTTCCCCTTCTTCCCCTATTTCCACCTCCTCTCGCCATCGACCACAACTATCCGCCTCGGTTGCCTTCAATCCTTCCGGAAATTTTGACCTCTCTTTTCAAGATGATGATGATGATTCTCCTAAAGTTGCACCTCCAATGCCACCCACAGAAGGTCGATTTGACGTGGTTATAGATAACGATGCAATTCGTTGTCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATTTCACCTTTAGCTACTGAACCAAAACAATTCCTTGAACGTACAATTGGTTTTACCATTAACTATACTCGAGAAGATCCTTACGATCGACGTGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGACTTGATTCAGTCTATCCGTGGCTACCCGTTCTGCTGGACTGGAGAGCGGGAGAGCTAGCACGGTATGCAGCAATGCTCGTTCCTCACCAGATAAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGCTGTTTGTGATGAAGAAAGTTTTTATAGTGTATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAAGCAGCTAATATGGCTAGGATGCTTGGGTTTGGAATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGAAACACAGCTCTCGGAGTGCTGGTTCGACAAGTATCGATTCGAGAACTGGTATTATTTTCTAAAATTGTAATGATAGTAAACCATTCAAACTTTTCATAGCTTATACTATTGATGAATGAGTAATTTAGTTTTGAAGTCATGAGAAAATGTTTGTTAAAAAGAAAATGATATATTTATTTTCCTTCTCTTTAAAGTTACGTGCATTTTGGGGTTCTTTTTTACCCATTTGA

Coding sequence (CDS)

ATGTCCACTCCCACCATTAAACCTCCACTTCCACTTTCTCCTTCCTTTAATCACCCATCTCGCTCACCCATTTCATGGAGTTTTTCCAGACCCATTTCCCCTTCTTCCCCTATTTCCACCTCCTCTCGCCATCGACCACAACTATCCGCCTCGGTTGCCTTCAATCCTTCCGGAAATTTTGACCTCTCTTTTCAAGATGATGATGATGATTCTCCTAAAGTTGCACCTCCAATGCCACCCACAGAAGGTCGATTTGACGTGGTTATAGATAACGATGCAATTCGTTGTCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATTTCACCTTTAGCTACTGAACCAAAACAATTCCTTGAACGTACAATTGGTTTTACCATTAACTATACTCGAGAAGATCCTTACGATCGACGTGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGACTTGATTCAGTCTATCCGTGGCTACCCGTTCTGCTGGACTGGAGAGCGGGAGAGCTAGCACGGTATGCAGCAATGCTCGTTCCTCACCAGATAAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGCTGTTTGTGATGAAGAAAGTTTTTATAGTGTATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAAGCAGCTAATATGGCTAGGATGCTTGGGTTTGGAATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGA

Protein sequence

MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQLSASVAFNPSGNFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELFDLIDQHPVAPP

Homology

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BLAST of MELO3C010270.2 vs. NCBI nr
Match: XP_008443914.1 (PREDICTED: protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis melo])

HSP 1 Score: 513.8 bits (1322), Expect = 3.2e-142
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQLSASVAFNPSGNF 60
           MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQLSASVAFNPSGNF
Sbjct: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQLSASVAFNPSGNF 60

Query: 61  DLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQFL 120
           DLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQFL
Sbjct: 61  DLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQFL 120

Query: 121 ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV 180
           ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV
Sbjct: 121 ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV 180

Query: 181 PHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELF 240
           PHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELF
Sbjct: 181 PHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELF 240

Query: 241 DLIDQHPVAPP 252
           DLIDQHPVAPP
Sbjct: 241 DLIDQHPVAPP 251

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BLAST of MELO3C010270.2 vs. NCBI nr
Match: XP_011655753.1 (PREDICTED: uncharacterized protein LOC101216098 [Cucumis sativus] >KGN65205.1 hypothetical protein Csa_1G264560 [Cucumis sativus])

HSP 1 Score: 465.3 bits (1196), Expect = 1.3e-127
Identity = 233/254 (91.73%), Postives = 235/254 (92.52%), Query Frame = 0


Query: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSP---ISTSSRHRPQLSASVAFNPS 60
           MSTPTIKP  PLSPSFNHPSRSPISWSFSRPIS SSP   ISTSSRHR QLSASV+FNPS
Sbjct: 1   MSTPTIKPSFPLSPSFNHPSRSPISWSFSRPISDSSPSSLISTSSRHRRQLSASVSFNPS 60

Query: 61  GNFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           GNFDLSFQD           MPPTEGRFDVVIDNDAIRCLDLSSFQ TTGI+SPLATEPK
Sbjct: 61  GNFDLSFQDXXXXXXXXXXXMPPTEGRFDVVIDNDAIRCLDLSSFQTTTGIVSPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 252
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

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BLAST of MELO3C010270.2 vs. NCBI nr
Match: XP_022921932.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 465.3 bits (1196), Expect = 1.3e-127
Identity = 233/254 (91.73%), Postives = 237/254 (93.31%), Query Frame = 0


Query: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSP---ISTSSRHRPQLSASVAFNPS 60
           MSTP IKP LPLSPSFNHPSRSPISWSF RPIS SSP   I TSSR R Q+SASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           G FDLS QDD+DDS KV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 252
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

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BLAST of MELO3C010270.2 vs. NCBI nr
Match: XP_022987841.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 463.8 bits (1192), Expect = 3.8e-127
Identity = 231/254 (90.94%), Postives = 237/254 (93.31%), Query Frame = 0


Query: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSP---ISTSSRHRPQLSASVAFNPS 60
           MSTP IKP LPLSPSFNHPSRSPISWSF RPIS SSP   I +SSR R Q+SASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPSCSIFSSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           G FDLS QDD+DDSPKV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+HDIPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 252
           ELFDLIDQHPV PP
Sbjct: 241 ELFDLIDQHPVVPP 254

[Close]

BLAST of MELO3C010270.2 vs. NCBI nr
Match: XP_023515428.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454.1 bits (1167), Expect = 3.0e-124
Identity = 229/254 (90.16%), Postives = 233/254 (91.73%), Query Frame = 0


Query: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSS---PISTSSRHRPQLSASVAFNPS 60
           MSTP IKP LPLSPS  HPSRSPISWSF RP S SS    I TSSR R Q+SASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSSIHPSRSPISWSFCRPFSDSSSFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           G FDLS QDD+DDS KV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 252
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of MELO3C010270.2 vs. TAIR10
Match: AT2G47910.1 (chlororespiratory reduction 6)

HSP 1 Score: 316.6 bits (810), Expect = 1.4e-86
Identity = 161/249 (64.66%), Postives = 191/249 (76.71%), Query Frame = 0


Query: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQLSASVAFNPSGNF 60
           M+T  +  P  L PS  H S  P+      P   ++      R    ++ SVAFNPSGNF
Sbjct: 1   MATKAVLLPW-LIPSPRHVSLFPV---VQLPALETAGWCVRKRRAEDVAVSVAFNPSGNF 60

Query: 61  DLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISP---LATEPK 120
           D+S  ++D DS KV PPMPPT GR++VVIDND+I  LDLS FQ+  GI SP      EPK
Sbjct: 61  DISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           ++L+RTIGFTINY REDP D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGELARYAA
Sbjct: 121 RYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQ+S+RMG+VFNPEALELFVM KVF+VY WLK+H +PKPRLK ++MARMLGFGIGD
Sbjct: 181 MLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGD 240

Query: 241 ELFDLIDQH 247
           ELFDLID +
Sbjct: 241 ELFDLIDHN 245

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BLAST of MELO3C010270.2 vs. Swiss-Prot
Match: sp|O82258|CRR6_ARATH (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR6 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.5e-85
Identity = 161/249 (64.66%), Postives = 191/249 (76.71%), Query Frame = 0


Query: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQLSASVAFNPSGNF 60
           M+T  +  P  L PS  H S  P+      P   ++      R    ++ SVAFNPSGNF
Sbjct: 1   MATKAVLLPW-LIPSPRHVSLFPV---VQLPALETAGWCVRKRRAEDVAVSVAFNPSGNF 60

Query: 61  DLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISP---LATEPK 120
           D+S  ++D DS KV PPMPPT GR++VVIDND+I  LDLS FQ+  GI SP      EPK
Sbjct: 61  DISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           ++L+RTIGFTINY REDP D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGELARYAA
Sbjct: 121 RYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQ+S+RMG+VFNPEALELFVM KVF+VY WLK+H +PKPRLK ++MARMLGFGIGD
Sbjct: 181 MLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGD 240

Query: 241 ELFDLIDQH 247
           ELFDLID +
Sbjct: 241 ELFDLIDHN 245

[Close]

BLAST of MELO3C010270.2 vs. TrEMBL
Match: tr|A0A1S3B982|A0A1S3B982_CUCME (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487393 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 2.1e-142
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQLSASVAFNPSGNF 60
           MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQLSASVAFNPSGNF
Sbjct: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQLSASVAFNPSGNF 60

Query: 61  DLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQFL 120
           DLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQFL
Sbjct: 61  DLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQFL 120

Query: 121 ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV 180
           ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV
Sbjct: 121 ERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLV 180

Query: 181 PHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELF 240
           PHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELF
Sbjct: 181 PHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELF 240

Query: 241 DLIDQHPVAPP 252
           DLIDQHPVAPP
Sbjct: 241 DLIDQHPVAPP 251

[Close]

BLAST of MELO3C010270.2 vs. TrEMBL
Match: tr|A0A0A0LTF0|A0A0A0LTF0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 8.6e-128
Identity = 233/254 (91.73%), Postives = 235/254 (92.52%), Query Frame = 0


Query: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSSP---ISTSSRHRPQLSASVAFNPS 60
           MSTPTIKP  PLSPSFNHPSRSPISWSFSRPIS SSP   ISTSSRHR QLSASV+FNPS
Sbjct: 1   MSTPTIKPSFPLSPSFNHPSRSPISWSFSRPISDSSPSSLISTSSRHRRQLSASVSFNPS 60

Query: 61  GNFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120
           GNFDLSFQD           MPPTEGRFDVVIDNDAIRCLDLSSFQ TTGI+SPLATEPK
Sbjct: 61  GNFDLSFQDXXXXXXXXXXXMPPTEGRFDVVIDNDAIRCLDLSSFQTTTGIVSPLATEPK 120

Query: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 252
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of MELO3C010270.2 vs. TrEMBL
Match: tr|A5CBF1|A5CBF1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004173 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 2.6e-100
Identity = 186/252 (73.81%), Postives = 208/252 (82.54%), Query Frame = 0


Query: 5   TIKPPLPL--SPSFNHPSRSPISWSFSRPISPSSPISTSSRHRPQL----SASVAFNPSG 64
           TIKP LPL  SPS  H   SP  W F +P   S+ +S S  H  +L    + SVAFNPSG
Sbjct: 3   TIKPLLPLSPSPSLKHAIPSPSPWIFCKPTFDST-VSLSMSHLNRLPRLVAVSVAFNPSG 62

Query: 65  NFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQ 124
           NFDLS  DD+DDS KV+PPMPPTEGR +VVIDND IR LDLS F   TGI SP + EPK+
Sbjct: 63  NFDLSIYDDEDDSTKVSPPMPPTEGRIEVVIDNDVIRRLDLSPFHTATGITSPSSAEPKE 122

Query: 125 FLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAM 184
           FLERTIGFTINYTREDP+D RELSE+PDIRLWFVRLD+ YPWLPV+LDWRAGELARY AM
Sbjct: 123 FLERTIGFTINYTREDPHDPRELSEFPDIRLWFVRLDATYPWLPVVLDWRAGELARYTAM 182

Query: 185 LVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDE 244
           LVPHQ++MRMG+VFNPEALELF+MKKVF+VYSWLKQH IPKPRLK ++MARMLGFGIGDE
Sbjct: 183 LVPHQMNMRMGVVFNPEALELFIMKKVFVVYSWLKQHKIPKPRLKTSDMARMLGFGIGDE 242

Query: 245 LFDLIDQHPVAP 251
           LFDLIDQHP+AP
Sbjct: 243 LFDLIDQHPLAP 253

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BLAST of MELO3C010270.2 vs. TrEMBL
Match: tr|A0A2N9FKZ0|A0A2N9FKZ0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19329 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 8.4e-99
Identity = 183/249 (73.49%), Postives = 209/249 (83.94%), Query Frame = 0


Query: 5   TIKPPLPLSPSFNHPSRSPISWSFSRPIS---PSSPISTSSRHRPQLSASVAFNPSGNFD 64
           TIKP LPL PS      SP  W   +PIS    S  I  S+R R Q++ SVAFNPSG FD
Sbjct: 4   TIKPILPLCPSLKQTLSSPTPWISCKPISDPIASLQIYHSTRPRGQVAVSVAFNPSGKFD 63

Query: 65  LSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPKQFLE 124
           LS  DD++DS K+ PPMPPT+ RFDVVI+ND+I  LD+S FQ TTGI SPL+ EP++FLE
Sbjct: 64  LSL-DDEEDSSKLEPPMPPTQDRFDVVIENDSIGRLDISPFQATTGITSPLSAEPRKFLE 123

Query: 125 RTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVP 184
           RTIGFTINYTREDPYD REL+E+PDIRLWFVRLD+ YPWLPVLLDWRAGELARYAAMLVP
Sbjct: 124 RTIGFTINYTREDPYDPRELTEFPDIRLWFVRLDATYPWLPVLLDWRAGELARYAAMLVP 183

Query: 185 HQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELFD 244
           HQ++M+MG+VFNPEALELFVMKKVFIVYSWLKQHDIPKPRLK ++MARMLGFGIGDELF+
Sbjct: 184 HQMNMKMGVVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTSDMARMLGFGIGDELFN 243

Query: 245 LIDQHPVAP 251
           LID+HP+ P
Sbjct: 244 LIDKHPLDP 251

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BLAST of MELO3C010270.2 vs. TrEMBL
Match: tr|A0A0F7H134|A0A0F7H134_9ROSI (Chlororespiratory reduction 6 OS=Hypseocharis bilobata OX=253189 GN=CRR6 PE=2 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.4e-98
Identity = 181/255 (70.98%), Postives = 211/255 (82.75%), Query Frame = 0


Query: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPISPSS----PISTSSRHRPQLSASVAFNP 60
           M++  IKP LPLSPS  H   S   W   +PIS S     P    SR + Q++ SVAFNP
Sbjct: 1   MASTVIKPLLPLSPSLKHNLPSFTPWISCKPISDSMTYCLPNLHFSRQQGQVAVSVAFNP 60

Query: 61  SGNFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEP 120
           SGNFD+S  +++DDSPKV PP+PPT+GRF+VVIDND IR LDLS FQ  TGI SPL+TEP
Sbjct: 61  SGNFDISMFEEEDDSPKVDPPLPPTKGRFEVVIDNDVIRRLDLSPFQSATGIASPLSTEP 120

Query: 121 KQFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYA 180
           K+FLERTIGFTINYT+EDP+D RELSE+PDIRLWFVRLDS YPWLPVLLDWRAGELARYA
Sbjct: 121 KEFLERTIGFTINYTKEDPHDIRELSEFPDIRLWFVRLDSTYPWLPVLLDWRAGELARYA 180

Query: 181 AMLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIG 240
           AMLVPHQ+S +MG+VFNPEALELFVMKK F VY+WLK+H+IPKPRLK  +MARMLGFGIG
Sbjct: 181 AMLVPHQMSAKMGLVFNPEALELFVMKKAFTVYTWLKEHNIPKPRLKTCDMARMLGFGIG 240

Query: 241 DELFDLIDQHPVAPP 252
           DELFDL+D++P++ P
Sbjct: 241 DELFDLVDKNPLSLP 255

The following BLAST results are available for this feature:

BLAST of MELO3C010270.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443914.1	3.2e-142	100.00	PREDICTED: protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis melo]	[more]
XP_011655753.1	1.3e-127	91.73	PREDICTED: uncharacterized protein LOC101216098 [Cucumis sativus] >KGN65205.1 hy...	[more]
XP_022921932.1	1.3e-127	91.73	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita mosch...	[more]
XP_022987841.1	3.8e-127	90.94	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxim...	[more]
XP_023515428.1	3.0e-124	90.16	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucurbita pepo subsp. pepo...	[more]

BLAST of MELO3C010270.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47910.1	1.4e-86	64.66	chlororespiratory reduction 6	[more]

BLAST of MELO3C010270.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O82258\|CRR6_ARATH	2.5e-85	64.66	Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=...	[more]

BLAST of MELO3C010270.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B982\|A0A1S3B982_CUCME	2.1e-142	100.00	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A0A0LTF0\|A0A0A0LTF0_CUCSA	8.6e-128	91.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1	[more]
tr\|A5CBF1\|A5CBF1_VITVI	2.6e-100	73.81	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004173 PE=4 SV=1	[more]
tr\|A0A2N9FKZ0\|A0A2N9FKZ0_FAGSY	8.4e-99	73.49	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19329 PE=4 SV=1	[more]
tr\|A0A0F7H134\|A0A0F7H134_9ROSI	1.4e-98	70.98	Chlororespiratory reduction 6 OS=Hypseocharis bilobata OX=253189 GN=CRR6 PE=2 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014946	CRR6

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0010275	NAD(P)H dehydrogenase complex assembly
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009536	plastid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010270.2.1	MELO3C010270.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014946	Protein chlororespiratory reduction 6	PFAM	PF08847	Crr6	coord: 89..242 e-value: 5.0E-60 score: 201.4
IPR014946	Protein chlororespiratory reduction 6	PANTHER	PTHR35724	FAMILY NOT NAMED	coord: 28..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..83
None	No IPR available	PANTHER	PTHR35724:SF1	PROTEIN CHLORORESPIRATORY REDUCTION 6, CHLOROPLASTIC	coord: 28..250

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C010270.2	Csa1G264560	Cucumber (Chinese Long) v2	cumedB049
MELO3C010270.2	CSPI01G17180	Wild cucumber (PI 183967)	cpimedB051
MELO3C010270.2	Cucsa.350610	Cucumber (Gy14) v1	cgymedB566
MELO3C010270.2	CmaCh10G005010	Cucurbita maxima (Rimu)	cmamedB060
MELO3C010270.2	CmoCh10G005350	Cucurbita moschata (Rifu)	cmomedB052
MELO3C010270.2	Lsi06G010630	Bottle gourd (USVL1VR-Ls)	lsimedB421
MELO3C010270.2	Cp4.1LG18g05250	Cucurbita pepo (Zucchini)	cpemedB392
MELO3C010270.2	CsGy1G017390	Cucumber (Gy14) v2	cgybmedB045
MELO3C010270.2	Cla018688	Watermelon (97103) v1	medwmB288
MELO3C010270.2	ClCG06G011950	Watermelon (Charleston Gray)	medwcgB249
MELO3C010270.2	Cla97C06G121120	Watermelon (97103) v2	medwmbB251
MELO3C010270.2	BhiUN297G11	Wax gourd	medwgoB276
MELO3C010270.2	Carg09961	Silver-seed gourd	carmedB0135
MELO3C010270.2	CsaV3_1G028410	Cucumber (Chinese Long) v3	cucmedB052

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C010270.2	Cucumber (Gy14) v2	cgybmedB091
MELO3C010270.2	Cucumber (Gy14) v1	cgymedB209
MELO3C010270.2	Cucurbita maxima (Rimu)	cmamedB112
MELO3C010270.2	Cucurbita maxima (Rimu)	cmamedB169
MELO3C010270.2	Cucurbita maxima (Rimu)	cmamedB816
MELO3C010270.2	Cucurbita moschata (Rifu)	cmomedB105
MELO3C010270.2	Cucurbita moschata (Rifu)	cmomedB160
MELO3C010270.2	Cucurbita moschata (Rifu)	cmomedB811
MELO3C010270.2	Cucurbita pepo (Zucchini)	cpemedB110
MELO3C010270.2	Cucurbita pepo (Zucchini)	cpemedB734
MELO3C010270.2	Cucurbita pepo (Zucchini)	cpemedB887
MELO3C010270.2	Wild cucumber (PI 183967)	cpimedB104
MELO3C010270.2	Cucumber (Chinese Long) v2	cumedB103
MELO3C010270.2	Melon (DHL92) v3.6.1	medmedB111
MELO3C010270.2	Bottle gourd (USVL1VR-Ls)	lsimedB107
MELO3C010270.2	Silver-seed gourd	carmedB0266
MELO3C010270.2	Silver-seed gourd	carmedB0585
MELO3C010270.2	Silver-seed gourd	carmedB1055
MELO3C010270.2	Cucumber (Chinese Long) v3	cucmedB108
MELO3C010270.2	Wax gourd	medwgoB290