Carg09961 (gene) Silver-seed gourd

Overview
NameCarg09961
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionchlororespiratory reduction 6
LocationCucurbita_argyrosperma_scaffold_030 : 714479 .. 715846 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAGATGAGGGAGAAGATAAACCAGGCGGACGCCTCCGCCTCCCACCGTTGGTATTTTTGCACGCCTTATCGTCGTCTCCATGTCCACTCCCGCCATTAAACCTTTGCTTCCACTTTCTCCTTCCTTCAATCATTCATCTCGCTCGCCTATTTCATGGAGTTTCTGCAGACCTATCTCAGATTCTTCGCCTTTTTGCTCTATTTTCACCTCTTCTCGGCAGCGACGACAAGTATCCGCCTCGGTTGCCTTTAATCCGTCCGGAAAATTTGATCTCTCTTTGCAAGATGATGAAGATGGTAAATCCTCGAATTGATTCTGATTCAATTTCTGATTTGTTCTGTACCTATTTCGGTTTGTGCATTCCAGAGATAGATAGGGGGATTTTTTTTTTCAATCCATGAACGTTGAATGAATTGCATGGGTCAATTATTTGGTTAGGTTTATAATTAGTCATTGGAATATTGCTCTGTTCTTTGGTTCTTCGCTTCCATTTTCTTGATGATGATAATCAAATCCATTGCTGCTCTTGGAGAAAAGGAAAATATGAACTATTAGGCAGATTTAATGGTATGGAAACTAAAGAAAAGGAAGAACAATTGTAGTGGTGATATGTTGGGGAGTTCTTCAAATTTTGATGAGTTTGAACTGATTGTTAAAAACAGATTCTTCTAAAGTTTCACCTCCAATGCCACCTACTGAAGGTCGGTTCGACGTGGTGATAGATAACGATGTAATTCGTCATCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATCTCACCTTTAGCTAGTAAGTTTTGGGTTGTAAATTTGTTTTGAAATGAGTTCTGTGATCCCTGATGAGTTCTCTTTCCTAGTATTGTTACAGCTGAGCCAAAACAATTTCTTGAGCGTACAATTGGTTTTACAATCAATTATACCCGAGAAGATCCTCACGATCGACGTGAATTATCCGAATACCCTGACATAAGACTGTGGTTTGTGAGGCTTGATTCAGAGTATCCATGGCTACCAGTTTTACTGGACTGGAGAGCGGGAGAGCTCGCTCGCTATGCAGCCATGCTCGTCCCTCACCAGGTGATGTTAGTGATGGCATGCTAAGAAAATGTTCTTATTAACATGGACTCATTTGGGATCTTTTTGGTTGCAGATTAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGTTGTTTGTGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAAACAGCTAATATGGCTAGGATGCTTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGA

mRNA sequence

ATGGAGGAAGATGAGGGAGAAGATAAACCAGGCGGACGCCTCCGCCTCCCACCGTTGGTATTTTTGCACGCCTTATCGTCGTCTCCATGTCCACTCCCGCCATTAAACCTTTGCTTCCACTTTCTCCTTCCTTCAATCATTCATCTCGCTCGCCTATTTCATGGAGTTTCTGCAGACCTATCTCAGATTCTTCGCCTTTTTGCTCTATTTTCACCTCTTCTCGGCAGCGACGACAAGTATCCGCCTCGGTTGCCTTTAATCCGTCCGGAAAATTTGATCTCTCTTTGCAAGATGATGAAGATGGTAAATCCTCGAATTGATTCTGATTCAATTTCTGATTTGTTCTGTACCTATTTCGATTCTTCTAAAGTTTCACCTCCAATGCCACCTACTGAAGGTCGGTTCGACGTGGTGATAGATAACGATGTAATTCGTCATCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATCTCACCTTTAGCTAGTAATATTGTTACAGCTGAGCCAAAACAATTTCTTGAGCGTACAATTGGTTTTACAATCAATTATACCCGAGAAGATCCTCACGATCGACGTGAATTATCCGAATACCCTGACATAAGACTGTGGTTTGTGAGGCTTGATTCAGAGTATCCATGGCTACCAGTTTTACTGGACTGGAGAGCGGGAGAGCTCGCTCGCTATGCAGCCATGCTCGTCCCTCACCAGATTAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGTTGTTTGTGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAAACAGCTAATATGGCTAGGATGCTTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGA

Coding sequence (CDS)

ATGGAGGAAGATGAGGGAGAAGATAAACCAGGCGGACGCCTCCGCCTCCCACCGTTGGTATTTTTGCACGCCTTATCGTCGTCTCCATGTCCACTCCCGCCATTAAACCTTTGCTTCCACTTTCTCCTTCCTTCAATCATTCATCTCGCTCGCCTATTTCATGGAGTTTCTGCAGACCTATCTCAGATTCTTCGCCTTTTTGCTCTATTTTCACCTCTTCTCGGCAGCGACGACAAGTATCCGCCTCGGTTGCCTTTAATCCGTCCGGAAAATTTGATCTCTCTTTGCAAGATGATGAAGATGGTAAATCCTCGAATTGATTCTGATTCAATTTCTGATTTGTTCTGTACCTATTTCGATTCTTCTAAAGTTTCACCTCCAATGCCACCTACTGAAGGTCGGTTCGACGTGGTGATAGATAACGATGTAATTCGTCATCTAGACTTATCCTCATTTCAGAAAACAACTGGAATAATCTCACCTTTAGCTAGTAATATTGTTACAGCTGAGCCAAAACAATTTCTTGAGCGTACAATTGGTTTTACAATCAATTATACCCGAGAAGATCCTCACGATCGACGTGAATTATCCGAATACCCTGACATAAGACTGTGGTTTGTGAGGCTTGATTCAGAGTATCCATGGCTACCAGTTTTACTGGACTGGAGAGCGGGAGAGCTCGCTCGCTATGCAGCCATGCTCGTCCCTCACCAGATTAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGTTGTTTGTGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGCAACATGACATTCCAAAGCCAAGATTGAAAACAGCTAATATGGCTAGGATGCTTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGA

Protein sequence

MEEDEGEDKPGGRLRLPPLVFLHALSSSPCPLPPLNLCFHFLLPSIIHLARLFHGVSADLSQILRLFALFSPLLGSDDKYPPRLPLIRPENLISLCKMMKMVNPRIDSDSISDLFCTYFDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLIDQHPVAPP
Homology
[Close]
BLAST of Carg09961 vs. NCBI nr
Match: XP_022921932.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 373.6 bits (958), Expect = 6.3e-100
Identity = 181/187 (96.79%), Postives = 182/187 (97.33%), Query Frame = 0 

Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLA+     EPKQFLERTI
Sbjct: 73  DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLAT-----EPKQFLERTI 132

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 133 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 192

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID
Sbjct: 193 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 252

Query: 300 QHPVAPP 307
           QHPVAPP
Sbjct: 253 QHPVAPP 254

[Close]
BLAST of Carg09961 vs. NCBI nr
Match: XP_023515428.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.6 bits (958), Expect = 6.3e-100
Identity = 181/187 (96.79%), Postives = 182/187 (97.33%), Query Frame = 0 

Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLA+     EPKQFLERTI
Sbjct: 73  DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLAT-----EPKQFLERTI 132

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 133 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 192

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID
Sbjct: 193 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 252

Query: 300 QHPVAPP 307
           QHPVAPP
Sbjct: 253 QHPVAPP 254

[Close]
BLAST of Carg09961 vs. NCBI nr
Match: XP_022987841.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 368.6 bits (945), Expect = 2.0e-98
Identity = 178/187 (95.19%), Postives = 180/187 (96.26%), Query Frame = 0 

Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS KVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLA+     EPKQFLERTI
Sbjct: 73  DSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLAT-----EPKQFLERTI 132

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 133 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 192

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLK+HDIPKPRLKTANMARMLGFGIGDELFDLID
Sbjct: 193 SMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARMLGFGIGDELFDLID 252

Query: 300 QHPVAPP 307
           QHPV PP
Sbjct: 253 QHPVVPP 254

[Close]
BLAST of Carg09961 vs. NCBI nr
Match: XP_008443914.1 (PREDICTED: protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis melo])

HSP 1 Score: 357.8 bits (917), Expect = 3.6e-95
Identity = 174/187 (93.05%), Postives = 177/187 (94.65%), Query Frame = 0 

Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS KV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLA+     EPKQFLERTI
Sbjct: 70  DSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLAT-----EPKQFLERTI 129

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 130 GFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQI 189

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLK ANMARMLGFGIGDELFDLID
Sbjct: 190 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELFDLID 249

Query: 300 QHPVAPP 307
           QHPVAPP
Sbjct: 250 QHPVAPP 251

[Close]
BLAST of Carg09961 vs. NCBI nr
Match: XP_022135296.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Momordica charantia])

HSP 1 Score: 348.6 bits (893), Expect = 2.2e-92
Identity = 168/187 (89.84%), Postives = 174/187 (93.05%), Query Frame = 0 

Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS KV+PPMPPT+GRFDVVIDND IR LDLS FQKTTGIISPL++     EPKQFLERTI
Sbjct: 62  DSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLST-----EPKQFLERTI 121

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 122 GFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQI 181

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVM KVF VYSWLKQHDIPKPRLKT NMARMLGFGIGDELFDLID
Sbjct: 182 SMRMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGDELFDLID 241

Query: 300 QHPVAPP 307
           Q+PVAPP
Sbjct: 242 QNPVAPP 243

[Close]
BLAST of Carg09961 vs. TAIR10
Match: AT2G47910.1 (chlororespiratory reduction 6)

HSP 1 Score: 297.7 bits (761), Expect = 8.0e-81
Identity = 139/182 (76.37%), Postives = 158/182 (86.81%), Query Frame = 0 

Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS KV PPMPPT GR++VVIDND I  LDLS FQ+  GI SP   +   AEPK++L+RTI
Sbjct: 66  DSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSP--DDFGVAEPKRYLDRTI 125

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINY REDP D RELSEYPD+RLWFVRLD+ YPWLP+LLDWRAGELARYAAMLVPHQ+
Sbjct: 126 GFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQM 185

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           S+RMG+VFNPEALELFVM KVF+VY WLK+H +PKPRLKT++MARMLGFGIGDELFDLID
Sbjct: 186 SLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLID 245

Query: 300 QH 302
            +
Sbjct: 246 HN 245

[Close]
BLAST of Carg09961 vs. Swiss-Prot
Match: sp|O82258|CRR6_ARATH (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR6 PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.4e-79
Identity = 139/182 (76.37%), Postives = 158/182 (86.81%), Query Frame = 0 

Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS KV PPMPPT GR++VVIDND I  LDLS FQ+  GI SP   +   AEPK++L+RTI
Sbjct: 66  DSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSP--DDFGVAEPKRYLDRTI 125

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINY REDP D RELSEYPD+RLWFVRLD+ YPWLP+LLDWRAGELARYAAMLVPHQ+
Sbjct: 126 GFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQM 185

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           S+RMG+VFNPEALELFVM KVF+VY WLK+H +PKPRLKT++MARMLGFGIGDELFDLID
Sbjct: 186 SLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLID 245

Query: 300 QH 302
            +
Sbjct: 246 HN 245

[Close]
BLAST of Carg09961 vs. TrEMBL
Match: tr|A0A1S3B982|A0A1S3B982_CUCME (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487393 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.4e-95
Identity = 174/187 (93.05%), Postives = 177/187 (94.65%), Query Frame = 0 

Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS KV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLA+     EPKQFLERTI
Sbjct: 70  DSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLAT-----EPKQFLERTI 129

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAAMLVPHQI
Sbjct: 130 GFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQI 189

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLK ANMARMLGFGIGDELFDLID
Sbjct: 190 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELFDLID 249

Query: 300 QHPVAPP 307
           QHPVAPP
Sbjct: 250 QHPVAPP 251

[Close]
BLAST of Carg09961 vs. TrEMBL
Match: tr|A0A0A0LTF0|A0A0A0LTF0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 7.9e-91
Identity = 166/179 (92.74%), Postives = 169/179 (94.41%), Query Frame = 0 

Query: 128 MPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTIGFTINYTR 187
           MPPTEGRFDVVIDND IR LDLSSFQ TTGI+SPLA+     EPKQFLERTIGFTINYTR
Sbjct: 81  MPPTEGRFDVVIDNDAIRCLDLSSFQTTTGIVSPLAT-----EPKQFLERTIGFTINYTR 140

Query: 188 EDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQISMRMGIVF 247
           EDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAAMLVPHQISMRMGIVF
Sbjct: 141 EDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLVPHQISMRMGIVF 200

Query: 248 NPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLIDQHPVAPP 307
           NPEALELFVMKKVFIVYSWLKQHDIPKPRLK ANMARMLGFGIGDELFDLIDQHPVAPP
Sbjct: 201 NPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGDELFDLIDQHPVAPP 254

[Close]
BLAST of Carg09961 vs. TrEMBL
Match: tr|D7T4Z8|D7T4Z8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0118g00630 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.5e-86
Identity = 154/186 (82.80%), Postives = 169/186 (90.86%), Query Frame = 0 

Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS+KVSPPMPPTEGR +VVIDNDVIR LDLS F   TGI SP      +AEPK+FLERTI
Sbjct: 33  DSTKVSPPMPPTEGRIEVVIDNDVIRRLDLSPFHTATGITSP-----SSAEPKEFLERTI 92

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDPHD RELSE+PDIRLWFVRLD+ YPWLPV+LDWRAGELARY AMLVPHQ+
Sbjct: 93  GFTINYTREDPHDPRELSEFPDIRLWFVRLDATYPWLPVVLDWRAGELARYTAMLVPHQM 152

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           +MRMG+VFNPEALELF+MKKVF+VYSWLKQH IPKPRLKT++MARMLGFGIGDELFDLID
Sbjct: 153 NMRMGVVFNPEALELFIMKKVFVVYSWLKQHKIPKPRLKTSDMARMLGFGIGDELFDLID 212

Query: 300 QHPVAP 306
           QHP+AP
Sbjct: 213 QHPLAP 213

[Close]
BLAST of Carg09961 vs. TrEMBL
Match: tr|A5CBF1|A5CBF1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004173 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.5e-86
Identity = 154/186 (82.80%), Postives = 169/186 (90.86%), Query Frame = 0 

Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS+KVSPPMPPTEGR +VVIDNDVIR LDLS F   TGI SP      +AEPK+FLERTI
Sbjct: 73  DSTKVSPPMPPTEGRIEVVIDNDVIRRLDLSPFHTATGITSP-----SSAEPKEFLERTI 132

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDPHD RELSE+PDIRLWFVRLD+ YPWLPV+LDWRAGELARY AMLVPHQ+
Sbjct: 133 GFTINYTREDPHDPRELSEFPDIRLWFVRLDATYPWLPVVLDWRAGELARYTAMLVPHQM 192

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           +MRMG+VFNPEALELF+MKKVF+VYSWLKQH IPKPRLKT++MARMLGFGIGDELFDLID
Sbjct: 193 NMRMGVVFNPEALELFIMKKVFVVYSWLKQHKIPKPRLKTSDMARMLGFGIGDELFDLID 252

Query: 300 QHPVAP 306
           QHP+AP
Sbjct: 253 QHPLAP 253

[Close]
BLAST of Carg09961 vs. TrEMBL
Match: tr|A5C0C8|A5C0C8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_018847 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 2.9e-85
Identity = 152/186 (81.72%), Postives = 167/186 (89.78%), Query Frame = 0 

Query: 120 DSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLASNIVTAEPKQFLERTI 179
           DS+KVSPPMPP EGR +V IDNDVIR LDLS F   TGI SP      +AEPK+FLERTI
Sbjct: 75  DSTKVSPPMPPXEGRIEVXIDNDVIRRLDLSPFHTATGITSP-----SSAEPKEFLERTI 134

Query: 180 GFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAAMLVPHQI 239
           GFTINYTREDPHD RELSE+PDIRLWFVRLD+ YPWLPV+LDWRAGELARY AMLVPHQ+
Sbjct: 135 GFTINYTREDPHDPRELSEFPDIRLWFVRLDATYPWLPVVLDWRAGELARYTAMLVPHQM 194

Query: 240 SMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGDELFDLID 299
           +MRMG+VFNPEALELF+MKKVF+VYSWLKQH IPKPRLKT++MARMLGFGIGDELFDLID
Sbjct: 195 NMRMGVVFNPEALELFIMKKVFVVYSWLKQHKIPKPRLKTSDMARMLGFGIGDELFDLID 254

Query: 300 QHPVAP 306
           QHP+AP
Sbjct: 255 QHPLAP 255

The following BLAST results are available for this feature:
BLAST of Carg09961 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022921932.16.3e-10096.79protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita mosch... [more]
XP_023515428.16.3e-10096.79protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucurbita pepo subsp. pepo... [more]
XP_022987841.12.0e-9895.19protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxim... [more]
XP_008443914.13.6e-9593.05PREDICTED: protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis melo][more]
XP_022135296.12.2e-9289.84protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Momordica charantia][more]
BLAST of Carg09961 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G47910.18.0e-8176.37chlororespiratory reduction 6[more]
BLAST of Carg09961 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O82258|CRR6_ARATH1.4e-7976.37Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=... [more]
BLAST of Carg09961 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B982|A0A1S3B982_CUCME2.4e-9593.05protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A0A0LTF0|A0A0A0LTF0_CUCSA7.9e-9192.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1[more]
tr|D7T4Z8|D7T4Z8_VITVI1.5e-8682.80Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0118g00630 PE=4 SV=... [more]
tr|A5CBF1|A5CBF1_VITVI1.5e-8682.80Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004173 PE=4 SV=1[more]
tr|A5C0C8|A5C0C8_VITVI2.9e-8581.72Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_018847 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014946CRR6
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09961-RACarg09961-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014946Protein chlororespiratory reduction 6PFAMPF08847Crr6coord: 139..297
e-value: 1.9E-59
score: 199.6
IPR014946Protein chlororespiratory reduction 6PANTHERPTHR35724FAMILY NOT NAMEDcoord: 119..305
NoneNo IPR availablePANTHERPTHR35724:SF1PROTEIN CHLORORESPIRATORY REDUCTION 6, CHLOROPLASTICcoord: 119..305

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg09961Cla018688Watermelon (97103) v1carwmB0126
Carg09961Csa1G264560Cucumber (Chinese Long) v2carcuB0133
Carg09961MELO3C010270Melon (DHL92) v3.5.1carmeB0131
Carg09961ClCG06G011950Watermelon (Charleston Gray)carwcgB0125
Carg09961CSPI01G17180Wild cucumber (PI 183967)carcpiB0138
Carg09961Cucsa.350610Cucumber (Gy14) v1carcgyB0161
Carg09961CmaCh10G005010Cucurbita maxima (Rimu)carcmaB0166
Carg09961CmoCh10G005350Cucurbita moschata (Rifu)carcmoB0172
Carg09961Lsi06G010630Bottle gourd (USVL1VR-Ls)carlsiB118
Carg09961Cp4.1LG18g05250Cucurbita pepo (Zucchini)carcpeB0185
Carg09961CsGy1G017390Cucumber (Gy14) v2carcgybB0132
Carg09961MELO3C010270.2Melon (DHL92) v3.6.1carmedB0135
Carg09961CsaV3_1G028410Cucumber (Chinese Long) v3carcucB0142
Carg09961Cla97C06G121120Watermelon (97103) v2carwmbB0133
Carg09961BhiUN297G11Wax gourdcarwgoB0157
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg09961Silver-seed gourdcarcarB148
Carg09961Silver-seed gourdcarcarB153
Carg09961Silver-seed gourdcarcarB154
Carg09961Cucumber (Gy14) v2carcgybB0139
Carg09961Cucumber (Gy14) v1carcgyB0155
Carg09961Cucurbita maxima (Rimu)carcmaB0165
Carg09961Cucurbita maxima (Rimu)carcmaB0169
Carg09961Cucurbita moschata (Rifu)carcmoB0175
Carg09961Cucurbita pepo (Zucchini)carcpeB0181
Carg09961Cucurbita pepo (Zucchini)carcpeB0186
Carg09961Wild cucumber (PI 183967)carcpiB0145
Carg09961Cucumber (Chinese Long) v2carcuB0141
Carg09961Cucumber (Chinese Long) v3carcucB0149
Carg09961Bottle gourd (USVL1VR-Ls)carlsiB113
Carg09961Bottle gourd (USVL1VR-Ls)carlsiB115
Carg09961Melon (DHL92) v3.5.1carmeB0133
Carg09961Watermelon (97103) v2carwmbB0132
Carg09961Wax gourdcarwgoB0165
Carg09961Wax gourdcarwgoB0160