BhiUN297G11 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	BhiUN297G11
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Chlororespiratory reduction 6
Location	Contig297 : 226228 .. 228035 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACCAAATAGTTGTTAAATTTTAAAGATGGGAATAAAATCCATTTTGGACTCTTATCTAGGGCTTGTATATAATTATCTCTAATTTTGAAAAAATAAAGGAAGTAAAACTTGGAACTAAATTGGATAAGTAAGACAAGATGGTGCAAGAAGATAAACCAGACAACGCCTCCGCCTCCCACCATTTGGTATCGTTTCCATGTCCACTTCCGCCATTAAACCTTCACTTCCACTTCCTCCTTCCTTCAATCACCCATCTCGCTCACCCATTTCATGGAGTTTTTGCAGACCCATTTCAGATTCTTCGCCTTCTTTCCCTATTTCCACCTCTTCTCGCCATCGACGACAAGTATCCGCCTCCGTTGCCTTCAATCCTTCCGGAAATTTCGACCTCTCTTTGCAAGATGATGATGATGGTAACTCCTCAAACTATCCCTTACTTCAGTTTCTAGATTTGTTCTGTACCCATTTCGATTTGTTCATTCCAGAGTTAGTTCAAATAAGAATTGTGAGGATTGAGGAAAAGGGAAAGGGAGGGGAAATTTTATTTTCAATCTATCACCATTGAATGAAATTGCCTAGTTCGATTGTTTGAATAGGGCTTTAATTAGTCATTCAAAGAGAATTTCCCTGTTCTTTGTTGCTCAGCTGCCATCTTCTTGATGATGAATCATGATATTCAAATTCATTGCTGTCCTTTGGAGAAAATGATAGTATAAACTGTTAGGGAAGATTTTACTTAACTTTCCCTTGAAATGGTATGGAAACAAGAGAAAAGGAAGAACAATTGTGGTGGTTATATATATATATATCTAGGGAGTTCTTGAAATTTTGATGAGTTTTAACTGATTGTTAAGAACAGATTCTCCTAAAGTTGCACCTCCAATGCCACCCACTGAAGGTCGATTCGACGTGGTTATAGATAACGATGCAATTCGTCGTCTAGACTTATCATCGTTTCAGAAAACAACCGGAATAATTTCACCTTTAGCTAGTAAGTTTTTGGGTTGGTTGATATGTTTATATCAGCGTTTTGAAATTAGTTCTGTGATCCCTGATGAGTTCTCTTTCCTAGTATTGTTACAGCTGAGCCAAAACAATTCCTTGAAAGTACAATTGGTTTTACTATTAATTATACCCGAGAAGATCCTTACGATCGACGTGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCAGTCTATCCATGGCTACCTGTTCTGTTGGACTGGAGAGCGGGAGAGCTCGCTCGATACGCAGCCATGCTCATCCCTCACCAGGTGATGCTAGTGATGAAAGGCTATGAAAATGTTGATGTTAAGGAGTGAGAGACTGAGTTTTTGGGATCTTTTCTATTGCAGATAAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGTTGTTTGTGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGGAACATGAGATTCCAAAGCCAAGATTGAAAACAGCTAATATGGCTAGGATGCTTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGAAACACGGGACCGAGCTCGAAACTCCGGTTCGATATGATCGATTCGAGAACTGGTATTATTTTCTAAAATTGTAATCATATTCTCAAAAGTAGAGTTGTAACCCTGTAATAGTATGTTCTCAACTTTTCAAACTTTTCTTAGGTTATTATTGTTGATGAATGAGTAATTTAGTTATGGAGCCATGAAAAAATGTTTGTTAAAAAGATAATAAGTTTTTTTTGGGTAA

mRNA sequence

ATACCAAATAGTTGTTAAATTTTAAAGATGGGAATAAAATCCATTTTGGACTCTTATCTAGGGCTTGTATATAATTATCTCTAATTTTGAAAAAATAAAGGAAGTAAAACTTGGAACTAAATTGGATAAGTAAGACAAGATGGTGCAAGAAGATAAACCAGACAACGCCTCCGCCTCCCACCATTTGGTATCGTTTCCATGTCCACTTCCGCCATTAAACCTTCACTTCCACTTCCTCCTTCCTTCAATCACCCATCTCGCTCACCCATTTCATGGAGTTTTTGCAGACCCATTTCAGATTCTTCGCCTTCTTTCCCTATTTCCACCTCTTCTCGCCATCGACGACAAGTATCCGCCTCCGTTGCCTTCAATCCTTCCGGAAATTTCGACCTCTCTTTGCAAGATGATGATGATGATTCTCCTAAAGTTGCACCTCCAATGCCACCCACTGAAGGTCGATTCGACGTGGTTATAGATAACGATGCAATTCGTCGTCTAGACTTATCATCGTTTCAGAAAACAACCGGAATAATTTCACCTTTAGCTACTGAGCCAAAACAATTCCTTGAAAGTACAATTGGTTTTACTATTAATTATACCCGAGAAGATCCTTACGATCGACGTGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCAGTCTATCCATGGCTACCTGTTCTGTTGGACTGGAGAGCGGGAGAGCTCGCTCGATACGCAGCCATGCTCATCCCTCACCAGATAAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGTTGTTTGTGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGGAACATGAGATTCCAAAGCCAAGATTGAAAACAGCTAATATGGCTAGGATGCTTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGAAACACGGGACCGAGCTCGAAACTCCGGTTCGATATGATCGATTCGAGAACTGGTATTATTTTCTAAAATTGTAATCATATTCTCAAAAGTAGAGTTGTAACCCTGTAATAGTATGTTCTCAACTTTTCAAACTTTTCTTAGGTTATTATTGTTGATGAATGAGTAATTTAGTTATGGAGCCATGAAAAAATGTTTGTTAAAAAGATAATAAGTTTTTTTTGGGTAA

Coding sequence (CDS)

ATGTCCACTTCCGCCATTAAACCTTCACTTCCACTTCCTCCTTCCTTCAATCACCCATCTCGCTCACCCATTTCATGGAGTTTTTGCAGACCCATTTCAGATTCTTCGCCTTCTTTCCCTATTTCCACCTCTTCTCGCCATCGACGACAAGTATCCGCCTCCGTTGCCTTCAATCCTTCCGGAAATTTCGACCTCTCTTTGCAAGATGATGATGATGATTCTCCTAAAGTTGCACCTCCAATGCCACCCACTGAAGGTCGATTCGACGTGGTTATAGATAACGATGCAATTCGTCGTCTAGACTTATCATCGTTTCAGAAAACAACCGGAATAATTTCACCTTTAGCTACTGAGCCAAAACAATTCCTTGAAAGTACAATTGGTTTTACTATTAATTATACCCGAGAAGATCCTTACGATCGACGTGAATTATCCGAATACCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCAGTCTATCCATGGCTACCTGTTCTGTTGGACTGGAGAGCGGGAGAGCTCGCTCGATACGCAGCCATGCTCATCCCTCACCAGATAAGTATGAGAATGGGAATTGTGTTCAATCCTGAGGCTTTGGAGTTGTTTGTGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGGAACATGAGATTCCAAAGCCAAGATTGAAAACAGCTAATATGGCTAGGATGCTTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCCCCACCATGA

Protein sequence

MSTSAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPSGNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPKQFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGDELFDLIDQHPVAPP

Homology

[Close]

BLAST of BhiUN297G11 vs. TAIR10
Match: AT2G47910.1 (chlororespiratory reduction 6)

HSP 1 Score: 323.2 bits (827), Expect = 1.5e-88
Identity = 152/207 (73.43%), Postives = 176/207 (85.02%), Query Frame = 0


Query: 46  RHRRQVSASVAFNPSGNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSF 105
           R    V+ SVAFNPSGNFD+S  ++D DS KV PPMPPT GR++VVIDND+I RLDLS F
Sbjct: 39  RRAEDVAVSVAFNPSGNFDISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPF 98

Query: 106 QKTTGIISP---LATEPKQFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYP 165
           Q+  GI SP      EPK++L+ TIGFTINY REDP D RELSEYPD+RLWFVRLD++YP
Sbjct: 99  QRAIGITSPDDFGVAEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYP 158

Query: 166 WLPVLLDWRAGELARYAAMLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPK 225
           WLP+LLDWRAGELARYAAML+PHQ+S+RMG+VFNPEALELFVM KVF+VY WLK H +PK
Sbjct: 159 WLPLLLDWRAGELARYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPK 218

Query: 226 PRLKTANMARMLGFGIGDELFDLIDQH 250
           PRLKT++MARMLGFGIGDELFDLID +
Sbjct: 219 PRLKTSDMARMLGFGIGDELFDLIDHN 245

[Close]

BLAST of BhiUN297G11 vs. Swiss-Prot
Match: sp|O82258|CRR6_ARATH (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR6 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.6e-87
Identity = 152/207 (73.43%), Postives = 176/207 (85.02%), Query Frame = 0


Query: 46  RHRRQVSASVAFNPSGNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSF 105
           R    V+ SVAFNPSGNFD+S  ++D DS KV PPMPPT GR++VVIDND+I RLDLS F
Sbjct: 39  RRAEDVAVSVAFNPSGNFDISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPF 98

Query: 106 QKTTGIISP---LATEPKQFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYP 165
           Q+  GI SP      EPK++L+ TIGFTINY REDP D RELSEYPD+RLWFVRLD++YP
Sbjct: 99  QRAIGITSPDDFGVAEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYP 158

Query: 166 WLPVLLDWRAGELARYAAMLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPK 225
           WLP+LLDWRAGELARYAAML+PHQ+S+RMG+VFNPEALELFVM KVF+VY WLK H +PK
Sbjct: 159 WLPLLLDWRAGELARYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPK 218

Query: 226 PRLKTANMARMLGFGIGDELFDLIDQH 250
           PRLKT++MARMLGFGIGDELFDLID +
Sbjct: 219 PRLKTSDMARMLGFGIGDELFDLIDHN 245

[Close]

BLAST of BhiUN297G11 vs. TrEMBL
Match: tr|A0A1S3B982|A0A1S3B982_CUCME (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487393 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 1.3e-131
Identity = 236/254 (92.91%), Postives = 240/254 (94.49%), Query Frame = 0


Query: 1   MSTSAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPS 60
           MST  IKP LPL PSFNHPSRSPISWSF RPI   SPS PISTSSRHR Q+SASVAFNPS
Sbjct: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPI---SPSSPISTSSRHRPQLSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           GNFDLS QDDDDDSPKVAPPMPPTEGRFDVVIDNDAIR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GNFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           ML+PHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 251

[Close]

BLAST of BhiUN297G11 vs. TrEMBL
Match: tr|A0A0A0LTF0|A0A0A0LTF0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 6.9e-125
Identity = 225/254 (88.58%), Postives = 231/254 (90.94%), Query Frame = 0


Query: 1   MSTSAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPS 60
           MST  IKPS PL PSFNHPSRSPISWSF RPISDSSPS  ISTSSRHRRQ+SASV+FNPS
Sbjct: 1   MSTPTIKPSFPLSPSFNHPSRSPISWSFSRPISDSSPSSLISTSSRHRRQLSASVSFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           GNFDLS QD           MPPTEGRFDVVIDNDAIR LDLSSFQ TTGI+SPLATEPK
Sbjct: 61  GNFDLSFQDXXXXXXXXXXXMPPTEGRFDVVIDNDAIRCLDLSSFQTTTGIVSPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           ML+PHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of BhiUN297G11 vs. TrEMBL
Match: tr|A5CBF1|A5CBF1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004173 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.4e-104
Identity = 186/252 (73.81%), Postives = 213/252 (84.52%), Query Frame = 0


Query: 4   SAIKPSLPL--PPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPSG 63
           + IKP LPL   PS  H   SP  W FC+P  DS+ S  +S  +R  R V+ SVAFNPSG
Sbjct: 2   ATIKPLLPLSPSPSLKHAIPSPSPWIFCKPTFDSTVSLSMSHLNRLPRLVAVSVAFNPSG 61

Query: 64  NFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPKQ 123
           NFDLS+ DD+DDS KV+PPMPPTEGR +VVIDND IRRLDLS F   TGI SP + EPK+
Sbjct: 62  NFDLSIYDDEDDSTKVSPPMPPTEGRIEVVIDNDVIRRLDLSPFHTATGITSPSSAEPKE 121

Query: 124 FLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAM 183
           FLE TIGFTINYTREDP+D RELSE+PDIRLWFVRLD+ YPWLPV+LDWRAGELARY AM
Sbjct: 122 FLERTIGFTINYTREDPHDPRELSEFPDIRLWFVRLDATYPWLPVVLDWRAGELARYTAM 181

Query: 184 LIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGDE 243
           L+PHQ++MRMG+VFNPEALELF+MKKVF+VYSWLK+H+IPKPRLKT++MARMLGFGIGDE
Sbjct: 182 LVPHQMNMRMGVVFNPEALELFIMKKVFVVYSWLKQHKIPKPRLKTSDMARMLGFGIGDE 241

Query: 244 LFDLIDQHPVAP 254
           LFDLIDQHP+AP
Sbjct: 242 LFDLIDQHPLAP 253

[Close]

BLAST of BhiUN297G11 vs. TrEMBL
Match: tr|A0A2I4DPB6|A0A2I4DPB6_9ROSI (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Juglans regia OX=51240 GN=LOC108982145 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.3e-103
Identity = 184/249 (73.90%), Postives = 212/249 (85.14%), Query Frame = 0


Query: 5   AIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPSGNFD 64
           +IKP LPL PS N    S   W  C+PISD      IS S+R RR+V+ASV+FNPSGNFD
Sbjct: 4   SIKPILPLSPSLNQTISSSTPWMSCKPISDPMAFLHISHSTRPRREVAASVSFNPSGNFD 63

Query: 65  LSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPKQFLE 124
           LSL DD++D+ K +PPMPP+EGRF++VIDND IRRLDLS FQ TTGI SPL+ EP++FLE
Sbjct: 64  LSLYDDEEDASKPSPPMPPSEGRFEIVIDNDIIRRLDLSPFQATTGINSPLSVEPQEFLE 123

Query: 125 STIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLIP 184
             IGF INYTREDP D RELSE+PDIRLWFVRLD+ YPWLPVLLDWRAGELARYAAML+P
Sbjct: 124 RKIGFAINYTREDPRDPRELSEFPDIRLWFVRLDATYPWLPVLLDWRAGELARYAAMLVP 183

Query: 185 HQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGDELFD 244
           HQ++MRMGIVFNPEALELF+MKKVFIVYSWLK H+IPKPRLKT++MARMLGF IGDELFD
Sbjct: 184 HQMNMRMGIVFNPEALELFIMKKVFIVYSWLKRHDIPKPRLKTSDMARMLGFIIGDELFD 243

Query: 245 LIDQHPVAP 254
           LI++HP+ P
Sbjct: 244 LIEEHPLDP 252

[Close]

BLAST of BhiUN297G11 vs. TrEMBL
Match: tr|A0A2N9FKZ0|A0A2N9FKZ0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19329 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.7e-102
Identity = 184/250 (73.60%), Postives = 213/250 (85.20%), Query Frame = 0


Query: 4   SAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPSGNF 63
           + IKP LPL PS      SP  W  C+PISD   S  I  S+R R QV+ SVAFNPSG F
Sbjct: 3   TTIKPILPLCPSLKQTLSSPTPWISCKPISDPIASLQIYHSTRPRGQVAVSVAFNPSGKF 62

Query: 64  DLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPKQFL 123
           DLSL DD++DS K+ PPMPPT+ RFDVVI+ND+I RLD+S FQ TTGI SPL+ EP++FL
Sbjct: 63  DLSL-DDEEDSSKLEPPMPPTQDRFDVVIENDSIGRLDISPFQATTGITSPLSAEPRKFL 122

Query: 124 ESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAAMLI 183
           E TIGFTINYTREDPYD REL+E+PDIRLWFVRLD+ YPWLPVLLDWRAGELARYAAML+
Sbjct: 123 ERTIGFTINYTREDPYDPRELTEFPDIRLWFVRLDATYPWLPVLLDWRAGELARYAAMLV 182

Query: 184 PHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGDELF 243
           PHQ++M+MG+VFNPEALELFVMKKVFIVYSWLK+H+IPKPRLKT++MARMLGFGIGDELF
Sbjct: 183 PHQMNMKMGVVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTSDMARMLGFGIGDELF 242

Query: 244 DLIDQHPVAP 254
           +LID+HP+ P
Sbjct: 243 NLIDKHPLDP 251

[Close]

BLAST of BhiUN297G11 vs. NCBI nr
Match: XP_022987841.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 479.2 bits (1232), Expect = 8.8e-132
Identity = 234/254 (92.13%), Postives = 241/254 (94.88%), Query Frame = 0


Query: 1   MSTSAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPS 60
           MST AIKP LPL PSFNHPSRSPISWSFCRPISDSSPS  I +SSR RRQVSASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPSCSIFSSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDD+DDSPKV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           ML+PHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLKTANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPV PP
Sbjct: 241 ELFDLIDQHPVVPP 254

[Close]

BLAST of BhiUN297G11 vs. NCBI nr
Match: XP_008443914.1 (PREDICTED: protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis melo])

HSP 1 Score: 478.0 bits (1229), Expect = 2.0e-131
Identity = 236/254 (92.91%), Postives = 240/254 (94.49%), Query Frame = 0


Query: 1   MSTSAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPS 60
           MST  IKP LPL PSFNHPSRSPISWSF RPI   SPS PISTSSRHR Q+SASVAFNPS
Sbjct: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPI---SPSSPISTSSRHRPQLSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           GNFDLS QDDDDDSPKVAPPMPPTEGRFDVVIDNDAIR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GNFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           ML+PHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 251

[Close]

BLAST of BhiUN297G11 vs. NCBI nr
Match: XP_022921932.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 477.2 bits (1227), Expect = 3.4e-131
Identity = 234/254 (92.13%), Postives = 240/254 (94.49%), Query Frame = 0


Query: 1   MSTSAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPS 60
           MST AIKP LPL PSFNHPSRSPISWSFCRPISDSSP   I TSSR RRQVSASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDD+DDS KV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           ML+PHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLKTANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of BhiUN297G11 vs. NCBI nr
Match: XP_023515428.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 466.1 bits (1198), Expect = 7.7e-128
Identity = 230/254 (90.55%), Postives = 236/254 (92.91%), Query Frame = 0


Query: 1   MSTSAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPS 60
           MST AIKP LPL PS  HPSRSPISWSFCRP SDSS    I TSSR RRQVSASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSSIHPSRSPISWSFCRPFSDSSSFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDD+DDS KV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           ML+PHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLKTANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of BhiUN297G11 vs. NCBI nr
Match: XP_011655753.1 (PREDICTED: uncharacterized protein LOC101216098 [Cucumis sativus] >KGN65205.1 hypothetical protein Csa_1G264560 [Cucumis sativus])

HSP 1 Score: 455.7 bits (1171), Expect = 1.0e-124
Identity = 225/254 (88.58%), Postives = 231/254 (90.94%), Query Frame = 0


Query: 1   MSTSAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPS 60
           MST  IKPS PL PSFNHPSRSPISWSF RPISDSSPS  ISTSSRHRRQ+SASV+FNPS
Sbjct: 1   MSTPTIKPSFPLSPSFNHPSRSPISWSFSRPISDSSPSSLISTSSRHRRQLSASVSFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           GNFDLS QD           MPPTEGRFDVVIDNDAIR LDLSSFQ TTGI+SPLATEPK
Sbjct: 61  GNFDLSFQDXXXXXXXXXXXMPPTEGRFDVVIDNDAIRCLDLSSFQTTTGIVSPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           ML+PHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

The following BLAST results are available for this feature:

BLAST of BhiUN297G11 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47910.1	1.5e-88	73.43	chlororespiratory reduction 6	[more]

BLAST of BhiUN297G11 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O82258\|CRR6_ARATH	2.6e-87	73.43	Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=...	[more]

BLAST of BhiUN297G11 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B982\|A0A1S3B982_CUCME	1.3e-131	92.91	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A0A0LTF0\|A0A0A0LTF0_CUCSA	6.9e-125	88.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1	[more]
tr\|A5CBF1\|A5CBF1_VITVI	1.4e-104	73.81	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004173 PE=4 SV=1	[more]
tr\|A0A2I4DPB6\|A0A2I4DPB6_9ROSI	3.3e-103	73.90	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Juglans regia OX=51240 G...	[more]
tr\|A0A2N9FKZ0\|A0A2N9FKZ0_FAGSY	1.7e-102	73.60	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19329 PE=4 SV=1	[more]

BLAST of BhiUN297G11 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022987841.1	8.8e-132	92.13	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxim...	[more]
XP_008443914.1	2.0e-131	92.91	PREDICTED: protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis melo]	[more]
XP_022921932.1	3.4e-131	92.13	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita mosch...	[more]
XP_023515428.1	7.7e-128	90.55	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucurbita pepo subsp. pepo...	[more]
XP_011655753.1	1.0e-124	88.58	PREDICTED: uncharacterized protein LOC101216098 [Cucumis sativus] >KGN65205.1 hy...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014946	CRR6

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010275	NAD(P)H dehydrogenase complex assembly
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009536	plastid
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
BhiUN297M11	BhiUN297M11	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014946	Protein chlororespiratory reduction 6	PFAM	PF08847	Crr6	coord: 92..245 e-value: 5.9E-60 score: 201.2
IPR014946	Protein chlororespiratory reduction 6	PANTHER	PTHR35724	FAMILY NOT NAMED	coord: 36..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..86
None	No IPR available	PANTHER	PTHR35724:SF1	PROTEIN CHLORORESPIRATORY REDUCTION 6, CHLOROPLASTIC	coord: 36..253

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
BhiUN297G11	Csa1G264560	Cucumber (Chinese Long) v2	cuwgoB011
BhiUN297G11	MELO3C010270	Melon (DHL92) v3.5.1	mewgoB275
BhiUN297G11	ClCG06G011950	Watermelon (Charleston Gray)	wcgwgoB516
BhiUN297G11	CSPI01G17180	Wild cucumber (PI 183967)	cpiwgoB011
BhiUN297G11	Cucsa.350610	Cucumber (Gy14) v1	cgywgoB700
BhiUN297G11	CmaCh10G005010	Cucurbita maxima (Rimu)	cmawgoB0055
BhiUN297G11	CmoCh10G005350	Cucurbita moschata (Rifu)	cmowgoB0049
BhiUN297G11	Lsi06G010630	Bottle gourd (USVL1VR-Ls)	lsiwgoB481
BhiUN297G11	Cp4.1LG18g05250	Cucurbita pepo (Zucchini)	cpewgoB0438
BhiUN297G11	CsGy1G017390	Cucumber (Gy14) v2	cgybwgoB010
BhiUN297G11	MELO3C010270.2	Melon (DHL92) v3.6.1	medwgoB276
BhiUN297G11	Carg09961	Silver-seed gourd	carwgoB0157
BhiUN297G11	CsaV3_1G028410	Cucumber (Chinese Long) v3	cucwgoB011
BhiUN297G11	Cla018688	Watermelon (97103) v1	wgowmB160
BhiUN297G11	Cla97C06G121120	Watermelon (97103) v2	wgowmbB159

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None