MELO3C008502.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C008502.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRWP-RK domain-containing protein, putative
Locationchr06 : 9205998 .. 9207843 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTTCTCCAATGGACTCCAATCCTCAAACCCTTCACAACATTATTCCACAGTTCGACTTTGAATGGCTACACGAAGATCTTTTCCCACTCCACAAGTAAGAACAAAAAAAAAAAAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAATTGGAGAAAACTTTAGATCGATCTCACAAATGGGGTTTTGCTAAATTTTGTTTTTTTTCTTTGTTTTCTTTCACAGTGAATTAGATGAGCTTCCACCTTTAGATAACGATGAGCTTTTGGATGTGAATTCACGTTCATTATTACCATTCCATTTGGACGATAATGATGTTTTGGAGTTTGACAGTGAATTTTTGTCGAGGGAGTTGGAGATGGTTGAAATCGAAAGAAATGGGTTTTCATCAACTTGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAAAGAGGTTGAGATTAATGGGAAATAATAATGGGAATAAGAGGAGAAAAGGTAGTTTTGTGTTGGGATTGGAAGAGATTCGAAAGTACTTTCATATACCAATATCAAAAGCAGCAAAAGAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACATAAGAGCTTGAATTCTCTCATCCAAAATGTGAAGGTATGTGTATCATTTATAAGTTGCCATCCACGTTGGATGTTGTTGGATAAAAATTTGGTTCTCAGTTTTTGGAAAACCTATAAGTACTCACTGATCTACATCCGACTTTTTTGACTTACTATCTACTCTTTACTAATAATTTTTAAAATAAAAAATAGTTTTCGAATAAAACCTTTCCTTTCCATGAACTTTTATTATACATACTTAAGAAAAGTAGATGTAAATGTTGATGAATGTTATTTGTTTGGCAGGAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCACAAGAGGCTACTGGAGGAAATGCCAAATATGGACCTCACCCACACAGTCAAAAGGCTAAGGCAAGCTTGCTTCAAAGCCAATTACAAGAAAAACAGAAGACTTAGGTCCAATAATATTGCTTCTCTTCATCACTAACCATTAATTA

mRNA sequence

TCTCTTCTCCAATGGACTCCAATCCTCAAACCCTTCACAACATTATTCCACAGTTCGACTTTGAATGGCTACACGAAGATCTTTTCCCACTCCACAATGAATTAGATGAGCTTCCACCTTTAGATAACGATGAGCTTTTGGATGTGAATTCACGTTCATTATTACCATTCCATTTGGACGATAATGATGTTTTGGAGTTTGACAGTGAATTTTTGTCGAGGGAGTTGGAGATGGTTGAAATCGAAAGAAATGGGTTTTCATCAACTTGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAAAGAGGTTGAGATTAATGGGAAATAATAATGGGAATAAGAGGAGAAAAGGTAGTTTTGTGTTGGGATTGGAAGAGATTCGAAAGTACTTTCATATACCAATATCAAAAGCAGCAAAAGAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACATAAGAGCTTGAATTCTCTCATCCAAAATGTGAAGGAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCACAAGAGGCTACTGGAGGAAATGCCAAATATGGACCTCACCCACACAGTCAAAAGGCTAAGGCAAGCTTGCTTCAAAGCCAATTACAAGAAAAACAGAAGACTTAGGTCCAATAATATTGCTTCTCTTCATCACTAACCATTAATTA

Coding sequence (CDS)

ATGGACTCCAATCCTCAAACCCTTCACAACATTATTCCACAGTTCGACTTTGAATGGCTACACGAAGATCTTTTCCCACTCCACAATGAATTAGATGAGCTTCCACCTTTAGATAACGATGAGCTTTTGGATGTGAATTCACGTTCATTATTACCATTCCATTTGGACGATAATGATGTTTTGGAGTTTGACAGTGAATTTTTGTCGAGGGAGTTGGAGATGGTTGAAATCGAAAGAAATGGGTTTTCATCAACTTGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAAAGAGGTTGAGATTAATGGGAAATAATAATGGGAATAAGAGGAGAAAAGGTAGTTTTGTGTTGGGATTGGAAGAGATTCGAAAGTACTTTCATATACCAATATCAAAAGCAGCAAAAGAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACATAAGAGCTTGAATTCTCTCATCCAAAATGTGAAGGAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCACAAGAGGCTACTGGAGGAAATGCCAAATATGGACCTCACCCACACAGTCAAAAGGCTAAGGCAAGCTTGCTTCAAAGCCAATTACAAGAAAAACAGAAGACTTAGGTCCAATAATATTGCTTCTCTTCATCACTAA

Protein sequence

MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDVLEFDSEFLSRELEMVEIERNGFSSTWKEEEEEEEEEEGEKRLRLMGNNNGNKRRKGSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH
Homology
[Close]
BLAST of MELO3C008502.2 vs. NCBI nr
Match: XP_008466842.1 (PREDICTED: protein RKD4 [Cucumis melo] >ADN33747.1 transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 402.9 bits (1034), Expect = 7.4e-109
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0 

Query: 1   MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDV 60
           MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDV
Sbjct: 1   MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDV 60

Query: 61  LEFDSEFLSRELEMVEIERNGFSSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFVL 120
           LEFDSEFLSRELEMVEIERNGFSSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFVL
Sbjct: 61  LEFDSEFLSRELEMVEIERNGFSSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFVL 120

Query: 121 GLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLT 180
           GLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLT
Sbjct: 121 GLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLT 180

Query: 181 NEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH 234
           NEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH
Sbjct: 181 NEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH 233

[Close]
BLAST of MELO3C008502.2 vs. NCBI nr
Match: KGN57660.1 (hypothetical protein Csa_3G239240 [Cucumis sativus])

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 203/287 (70.73%), Postives = 211/287 (73.52%), Query Frame = 0 

Query: 1   MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSR-SLLPFHLDDND 60
           MDSNPQT HN IPQFDFEWLHEDLFP HNELDELPPLD DE LDVNS  SLL FHL DN+
Sbjct: 1   MDSNPQTFHN-IPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNN 60

Query: 61  VLEFDSEFLSRELEMVEIERNGF-SSTW-------------------------------- 120
           VLEF+SEFLSRE++  EIER G  SSTW                                
Sbjct: 61  VLEFESEFLSREMD--EIERKGLPSSTWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 --------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFVLGLEEIR 180
                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  FVLGLEEI+
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLGLEEIK 180

Query: 181 KYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLTNEVKGL 234
           KY+HIPIS+AAKEMNVGLTVLKRRCRQLNIMRWPHRK KS NSLIQNVKEMGLTNEVKGL
Sbjct: 181 KYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGL 240

[Close]
BLAST of MELO3C008502.2 vs. NCBI nr
Match: XP_022968161.1 (protein RKD4 [Cucurbita maxima])

HSP 1 Score: 206.5 bits (524), Expect = 1.0e-49
Identity = 126/246 (51.22%), Postives = 147/246 (59.76%), Query Frame = 0 

Query: 15  FDFEW-LHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDVLEFDSEFLSRELE 74
           FDF W  H+ LFP  +E  ELPPLD D   D NS S LPFH D  D+ E +SE LS +  
Sbjct: 12  FDFGWPYHQHLFPFDHEALELPPLDVDGSFDFNSLS-LPFHWD--DISELESEILSLDKH 71

Query: 75  MV---------------------------EIERNGFSSTWXXXXXXXXXXXXXXXXXXXX 134
           M+                           ++ R     T                     
Sbjct: 72  MIPVTPLYEEDMVAVDETKPERMVKLKDDDMSRELQEVTRMIETGLSNWKEEEEECEKRV 131

Query: 135 XXXXXXXXXGSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKS 194
                     S VLGLEEI+K+FHIPI++AAK M+VGLTVLKRRCR+LNIMRWPHRK KS
Sbjct: 132 RLIMRNGRRKSSVLGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKS 191

Query: 195 LNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSN 233
           LNSLI NV+EMGLTNE+KGLEEHKRL+EE+PNMDLTH  +RLRQACFKANYKK RR   +
Sbjct: 192 LNSLITNVQEMGLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKRR---S 251

[Close]
BLAST of MELO3C008502.2 vs. NCBI nr
Match: XP_022945007.1 (protein RKD2 [Cucurbita moschata])

HSP 1 Score: 195.3 bits (495), Expect = 2.3e-46
Identity = 121/246 (49.19%), Postives = 147/246 (59.76%), Query Frame = 0 

Query: 15  FDFEW-LHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDVLEFDSEFLSREL- 74
           FDFEW  H+ LFP  +E  ELPPLD D   D NS S LPFH DD   LE +  +L + + 
Sbjct: 12  FDFEWPYHQHLFPFDHEALELPPLDVDASFDFNSLS-LPFHWDDISELEAEILWLDKHMI 71

Query: 75  -------------------EMVEIERNGFSS--------TWXXXXXXXXXXXXXXXXXXX 134
                               MV+++ N  +S                             
Sbjct: 72  PVTPLNDEDMLAVDETKAERMVKLKDNDGTSRELQEETRVIETGLSSCKENEEEEECERR 131

Query: 135 XXXXXXXXXXGSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHK 194
                      S VLGL+EI+K+F IPI++AAK MNVGLTVLKRRCR+L+IMRWPHRK K
Sbjct: 132 MRLIMRNGRRKSKVLGLDEIQKHFDIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLK 191

Query: 195 SLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRS 232
           SLNSLI NV+EMGLTNE+KGLEEHKRL+EE+P+ DLTH  +RLRQACFKANYKK RR   
Sbjct: 192 SLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDTDLTHRTRRLRQACFKANYKKKRR--- 251

[Close]
BLAST of MELO3C008502.2 vs. NCBI nr
Match: XP_022141143.1 (protein RKD4 [Momordica charantia])

HSP 1 Score: 188.0 bits (476), Expect = 3.7e-44
Identity = 125/258 (48.45%), Postives = 149/258 (57.75%), Query Frame = 0 

Query: 8   LHNIIPQFDFEW-LHEDLFPLHNELDELPPLDNDEL-LDVNSRSLLPFHLDDNDVLEFD- 67
           LHN     DFEW  HEDLF     L ELPPLD      D+     LPFH ++   LE + 
Sbjct: 9   LHN--NPLDFEWPYHEDLFQFDKAL-ELPPLDVGLFDFDLADSLSLPFHWENLSQLELEL 68

Query: 68  ---SEFLSRELEMVEIER-------------------------NGFS--STWXXXXXXXX 127
               EF S +  M   E+                          GF+  S+W        
Sbjct: 69  QSPPEFFSPDKHMTADEKPPARMIKLEYEEGQHEQQQQREQIERGFNSDSSWISDVDEKK 128

Query: 128 XXXXXXXXXXXXXXXXXXXXXGSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQL 187
                                 S VLGLEEI+ +FHIPIS+AAK+MNVGLTVLK+RCR+L
Sbjct: 129 RRNNMRLRRSK-----------SSVLGLEEIQNHFHIPISEAAKQMNVGLTVLKKRCREL 188

Query: 188 NIMRWPHRKHKSLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFK 233
           NIMRWPHRK KSLNSLI+NVKEMGL++E+K LEEHKRL+EE+P+MDLTH  KRLRQACFK
Sbjct: 189 NIMRWPHRKLKSLNSLIKNVKEMGLSSEIKVLEEHKRLVEELPDMDLTHRTKRLRQACFK 248

[Close]
BLAST of MELO3C008502.2 vs. TAIR10
Match: AT5G53040.1 (RWP-RK domain-containing protein)

HSP 1 Score: 134.4 bits (337), Expect = 8.9e-32
Identity = 64/104 (61.54%), Postives = 84/104 (80.77%), Query Frame = 0 

Query: 120 LGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGL 179
           L + EI+++F  PI KAAKE+NVGLTVLK+RCR+L I RWPHRK KSLNSLI+N+K +G+
Sbjct: 148 LEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGM 207

Query: 180 TNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRL 224
             EVK LEEH+ L+E+ P+ +L+   K+LRQACFKANYK+ + L
Sbjct: 208 EEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRKSL 251

[Close]
BLAST of MELO3C008502.2 vs. TAIR10
Match: AT5G66990.1 (RWP-RK domain-containing protein)

HSP 1 Score: 111.7 bits (278), Expect = 6.2e-25
Identity = 55/116 (47.41%), Postives = 83/116 (71.55%), Query Frame = 0 

Query: 123 EEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM----- 182
           E +++YF++PI+KAAKE+N+G+T+LK+RCR+L I RWPHRK  SLN+LI N+K++     
Sbjct: 162 EMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTK 221

Query: 183 ------GLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNN 228
                  L N ++ LE  K+++EE+P+++     KRLRQACFKA YK+ R   S++
Sbjct: 222 GRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

[Close]
BLAST of MELO3C008502.2 vs. TAIR10
Match: AT1G74480.1 (RWP-RK domain-containing protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-24
Identity = 59/119 (49.58%), Postives = 83/119 (69.75%), Query Frame = 0 

Query: 120 LGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM-- 179
           L  E + +YF++PI++AA  +NVGLT+LKRRCR+L I RWPHRK  SLN+LI NVKE+  
Sbjct: 135 LSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQK 194

Query: 180 --------GLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANY--KKNRRLRSN 227
                    L + ++ LE+ KR +E++P+++     KRLRQACFKAN+  KK R L+S+
Sbjct: 195 MEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSLKSD 253

[Close]
BLAST of MELO3C008502.2 vs. TAIR10
Match: AT1G18790.1 (RWP-RK domain-containing protein)

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20
Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 0 

Query: 117 SFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE 176
           S  L  E I  YF++PI++AA+E+N+GLT+LK+RCR+L I RWPHRK  SL  LI NVKE
Sbjct: 125 SKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKE 184

Query: 177 MGLTNEVKGLEEHKRL-------------LEEMPNMDLTHTVKRLRQACFKANYKKNRR 223
           +    +++G E   +L                 P++      KRLRQACFKAN+K+ RR
Sbjct: 185 L---EKMEGEENEDKLRNXXXXXXXXXXXXXXXPDLKFEDKTKRLRQACFKANHKRKRR 240

[Close]
BLAST of MELO3C008502.2 vs. TAIR10
Match: AT4G35590.1 (RWP-RK domain-containing protein)

HSP 1 Score: 78.6 bits (192), Expect = 5.8e-15
Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 0 

Query: 120 LGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE--- 179
           L LEE+ KYF + I +A++ + VGLTVLK++CR+  I RWPHRK KSL+ LI +++    
Sbjct: 242 LSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAE 301

Query: 180 ----------MGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNR 222
                     M +  + + LE  KR + + P M++    K+ RQ  FK  ++ +R
Sbjct: 302 KQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASR 356

[Close]
BLAST of MELO3C008502.2 vs. Swiss-Prot
Match: sp|Q9LVU8|RKD4_ARATH (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-30
Identity = 64/104 (61.54%), Postives = 84/104 (80.77%), Query Frame = 0 

Query: 120 LGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGL 179
           L + EI+++F  PI KAAKE+NVGLTVLK+RCR+L I RWPHRK KSLNSLI+N+K +G+
Sbjct: 148 LEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGM 207

Query: 180 TNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRL 224
             EVK LEEH+ L+E+ P+ +L+   K+LRQACFKANYK+ + L
Sbjct: 208 EEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRKSL 251

[Close]
BLAST of MELO3C008502.2 vs. Swiss-Prot
Match: sp|Q9FGD1|RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-23
Identity = 55/116 (47.41%), Postives = 83/116 (71.55%), Query Frame = 0 

Query: 123 EEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM----- 182
           E +++YF++PI+KAAKE+N+G+T+LK+RCR+L I RWPHRK  SLN+LI N+K++     
Sbjct: 162 EMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTK 221

Query: 183 ------GLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNN 228
                  L N ++ LE  K+++EE+P+++     KRLRQACFKA YK+ R   S++
Sbjct: 222 GRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

[Close]
BLAST of MELO3C008502.2 vs. Swiss-Prot
Match: sp|Q9CA66|RKD2_ARATH (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-23
Identity = 59/119 (49.58%), Postives = 83/119 (69.75%), Query Frame = 0 

Query: 120 LGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEM-- 179
           L  E + +YF++PI++AA  +NVGLT+LKRRCR+L I RWPHRK  SLN+LI NVKE+  
Sbjct: 135 LSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQK 194

Query: 180 --------GLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANY--KKNRRLRSN 227
                    L + ++ LE+ KR +E++P+++     KRLRQACFKAN+  KK R L+S+
Sbjct: 195 MEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSLKSD 253

[Close]
BLAST of MELO3C008502.2 vs. Swiss-Prot
Match: sp|Q9M9U9|RKD1_ARATH (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.2e-19
Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 0 

Query: 117 SFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE 176
           S  L  E I  YF++PI++AA+E+N+GLT+LK+RCR+L I RWPHRK  SL  LI NVKE
Sbjct: 125 SKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKE 184

Query: 177 MGLTNEVKGLEEHKRL-------------LEEMPNMDLTHTVKRLRQACFKANYKKNRR 223
           +    +++G E   +L                 P++      KRLRQACFKAN+K+ RR
Sbjct: 185 L---EKMEGEENEDKLRNXXXXXXXXXXXXXXXPDLKFEDKTKRLRQACFKANHKRKRR 240

[Close]
BLAST of MELO3C008502.2 vs. Swiss-Prot
Match: sp|O81791|RKD5_ARATH (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13
Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 0 

Query: 120 LGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE--- 179
           L LEE+ KYF + I +A++ + VGLTVLK++CR+  I RWPHRK KSL+ LI +++    
Sbjct: 242 LSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAE 301

Query: 180 ----------MGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNR 222
                     M +  + + LE  KR + + P M++    K+ RQ  FK  ++ +R
Sbjct: 302 KQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASR 356

[Close]
BLAST of MELO3C008502.2 vs. TrEMBL
Match: tr|A0A1S3CS47|A0A1S3CS47_CUCME (protein RKD4 OS=Cucumis melo OX=3656 GN=LOC103504148 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 4.9e-109
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0 

Query: 1   MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDV 60
           MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDV
Sbjct: 1   MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDV 60

Query: 61  LEFDSEFLSRELEMVEIERNGFSSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFVL 120
           LEFDSEFLSRELEMVEIERNGFSSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFVL
Sbjct: 61  LEFDSEFLSRELEMVEIERNGFSSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFVL 120

Query: 121 GLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLT 180
           GLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLT
Sbjct: 121 GLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLT 180

Query: 181 NEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH 234
           NEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH
Sbjct: 181 NEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH 233

[Close]
BLAST of MELO3C008502.2 vs. TrEMBL
Match: tr|E5GBA6|E5GBA6_CUCME (Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 4.9e-109
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0 

Query: 1   MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDV 60
           MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDV
Sbjct: 1   MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDV 60

Query: 61  LEFDSEFLSRELEMVEIERNGFSSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFVL 120
           LEFDSEFLSRELEMVEIERNGFSSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFVL
Sbjct: 61  LEFDSEFLSRELEMVEIERNGFSSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFVL 120

Query: 121 GLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLT 180
           GLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLT
Sbjct: 121 GLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLT 180

Query: 181 NEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH 234
           NEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH
Sbjct: 181 NEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH 233

[Close]
BLAST of MELO3C008502.2 vs. TrEMBL
Match: tr|A0A0A0L6Q6|A0A0A0L6Q6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239240 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.3e-77
Identity = 203/287 (70.73%), Postives = 211/287 (73.52%), Query Frame = 0 

Query: 1   MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSR-SLLPFHLDDND 60
           MDSNPQT HN IPQFDFEWLHEDLFP HNELDELPPLD DE LDVNS  SLL FHL DN+
Sbjct: 1   MDSNPQTFHN-IPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNN 60

Query: 61  VLEFDSEFLSRELEMVEIERNGF-SSTW-------------------------------- 120
           VLEF+SEFLSRE++  EIER G  SSTW                                
Sbjct: 61  VLEFESEFLSREMD--EIERKGLPSSTWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 --------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFVLGLEEIR 180
                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  FVLGLEEI+
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLGLEEIK 180

Query: 181 KYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLTNEVKGL 234
           KY+HIPIS+AAKEMNVGLTVLKRRCRQLNIMRWPHRK KS NSLIQNVKEMGLTNEVKGL
Sbjct: 181 KYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGL 240

[Close]
BLAST of MELO3C008502.2 vs. TrEMBL
Match: tr|A0A061G154|A0A061G154_THECC (RWP-RK domain-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_015430 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.2e-36
Identity = 78/104 (75.00%), Postives = 91/104 (87.50%), Query Frame = 0 

Query: 120 LGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGL 179
           L L+EI+KYF  PISKAAKEMNVGLTVLK+RCR+LNIMRWPHRK KSL +LI NVKE+GL
Sbjct: 148 LELDEIQKYFDFPISKAAKEMNVGLTVLKKRCRELNIMRWPHRKIKSLTALINNVKELGL 207

Query: 180 TNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRL 224
           TNE+  LE+HKRLLE++P+M+LT   K+LRQACFKANYKK R L
Sbjct: 208 TNEIMMLEDHKRLLEKLPDMELTERTKKLRQACFKANYKKRRSL 251

[Close]
BLAST of MELO3C008502.2 vs. TrEMBL
Match: tr|A0A067JSK1|A0A067JSK1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23923 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.2e-35
Identity = 79/111 (71.17%), Postives = 92/111 (82.88%), Query Frame = 0 

Query: 117 SFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE 176
           S  L +EEI+KYF +PI+KAAKEMNVGLTVLK+RCR+LNIMRWPHRK KSLNSLI NVKE
Sbjct: 106 SVPLEMEEIKKYFDLPITKAAKEMNVGLTVLKKRCRELNIMRWPHRKLKSLNSLINNVKE 165

Query: 177 MGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNN 228
           MGL NE+  LEE KRL+E++P+ +LT   KRLRQACFKANYKK R+    N
Sbjct: 166 MGLNNEIAMLEEDKRLVEDVPDTELTERTKRLRQACFKANYKKKRKCLPTN 216

The following BLAST results are available for this feature:
BLAST of MELO3C008502.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008466842.17.4e-109100.00PREDICTED: protein RKD4 [Cucumis melo] >ADN33747.1 transcription factor [Cucumis... [more]
KGN57660.12.0e-7770.73hypothetical protein Csa_3G239240 [Cucumis sativus][more]
XP_022968161.11.0e-4951.22protein RKD4 [Cucurbita maxima][more]
XP_022945007.12.3e-4649.19protein RKD2 [Cucurbita moschata][more]
XP_022141143.13.7e-4448.45protein RKD4 [Momordica charantia][more]
BLAST of MELO3C008502.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53040.18.9e-3261.54RWP-RK domain-containing protein[more]
AT5G66990.16.2e-2547.41RWP-RK domain-containing protein[more]
AT1G74480.11.4e-2449.58RWP-RK domain-containing protein[more]
AT1G18790.11.2e-2045.38RWP-RK domain-containing protein[more]
AT4G35590.15.8e-1537.39RWP-RK domain-containing protein[more]
BLAST of MELO3C008502.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LVU8|RKD4_ARATH1.6e-3061.54Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1[more]
sp|Q9FGD1|RKD3_ARATH1.1e-2347.41Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1[more]
sp|Q9CA66|RKD2_ARATH2.5e-2349.58Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1[more]
sp|Q9M9U9|RKD1_ARATH2.2e-1945.38Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1[more]
sp|O81791|RKD5_ARATH1.0e-1337.39Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1[more]
BLAST of MELO3C008502.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CS47|A0A1S3CS47_CUCME4.9e-109100.00protein RKD4 OS=Cucumis melo OX=3656 GN=LOC103504148 PE=4 SV=1[more]
tr|E5GBA6|E5GBA6_CUCME4.9e-109100.00Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A0A0L6Q6|A0A0A0L6Q6_CUCSA1.3e-7770.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239240 PE=4 SV=1[more]
tr|A0A061G154|A0A061G154_THECC4.2e-3675.00RWP-RK domain-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_015... [more]
tr|A0A067JSK1|A0A067JSK1_JATCU1.2e-3571.17Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23923 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009790 embryo development
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008502.2.1MELO3C008502.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 120..167
e-value: 2.3E-22
score: 78.6
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 107..189
score: 17.587
NoneNo IPR availablePANTHERPTHR32002FAMILY NOT NAMEDcoord: 121..218
NoneNo IPR availablePANTHERPTHR32002:SF24PROTEIN RKD5coord: 121..218

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C008502.2Csa3G239240Cucumber (Chinese Long) v2cumedB238
MELO3C008502.2CSPI03G19730Wild cucumber (PI 183967)cpimedB239
MELO3C008502.2Cucsa.032230Cucumber (Gy14) v1cgymedB002
MELO3C008502.2CmaCh18G013270Cucurbita maxima (Rimu)cmamedB434
MELO3C008502.2CmoCh18G013560Cucurbita moschata (Rifu)cmomedB423
MELO3C008502.2Cp4.1LG09g00300Cucurbita pepo (Zucchini)cpemedB045
MELO3C008502.2CsGy3G019650Cucumber (Gy14) v2cgybmedB215
MELO3C008502.2Cla004263Watermelon (97103) v1medwmB448
MELO3C008502.2ClCG05G009000Watermelon (Charleston Gray)medwcgB417
MELO3C008502.2Cla97C05G091310Watermelon (97103) v2medwmbB424
MELO3C008502.2Bhi01G001122Wax gourdmedwgoB531
MELO3C008502.2Carg20330Silver-seed gourdcarmedB0549
MELO3C008502.2CsaV3_3G019780Cucumber (Chinese Long) v3cucmedB246
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008502.2Wax gourdmedwgoB519
MELO3C008502.2Cucumber (Gy14) v2cgybmedB356
MELO3C008502.2Cucumber (Gy14) v1cgymedB365
MELO3C008502.2Cucurbita maxima (Rimu)cmamedB321
MELO3C008502.2Cucurbita maxima (Rimu)cmamedB347
MELO3C008502.2Cucurbita maxima (Rimu)cmamedB433
MELO3C008502.2Cucurbita moschata (Rifu)cmomedB306
MELO3C008502.2Cucurbita moschata (Rifu)cmomedB334
MELO3C008502.2Cucurbita moschata (Rifu)cmomedB422
MELO3C008502.2Cucurbita moschata (Rifu)cmomedB650
MELO3C008502.2Cucurbita pepo (Zucchini)cpemedB051
MELO3C008502.2Cucurbita pepo (Zucchini)cpemedB210
MELO3C008502.2Cucurbita pepo (Zucchini)cpemedB236
MELO3C008502.2Cucurbita pepo (Zucchini)cpemedB837
MELO3C008502.2Wild cucumber (PI 183967)cpimedB401
MELO3C008502.2Cucumber (Chinese Long) v2cumedB393
MELO3C008502.2Melon (DHL92) v3.6.1medmedB015
MELO3C008502.2Bottle gourd (USVL1VR-Ls)lsimedB038
MELO3C008502.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C008502.2Watermelon (Charleston Gray)medwcgB411
MELO3C008502.2Watermelon (97103) v1medwmB470
MELO3C008502.2Silver-seed gourdcarmedB0519
MELO3C008502.2Silver-seed gourdcarmedB0552
MELO3C008502.2Silver-seed gourdcarmedB0976
MELO3C008502.2Cucumber (Chinese Long) v3cucmedB410
MELO3C008502.2Watermelon (97103) v2medwmbB413