Cp4.1LG09g00300 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG09g00300
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRWP-RK domain-containing protein, putative
LocationCp4.1LG09 : 114286 .. 115272 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCCCAGCACCAAACTACACCCACACGACTTTGACTTTGAGTGGCCATATCACCAACATATTTTCCCCTTCGACCACGAGTAAGAACAAACCATCTAAATTGATAGATACAGTTCAATTTGTTAACACAAGTCTAAAGGATTCAACTTTACGTGATGGGTTCATTTTAAATTGATTTGTCTTTGATGGGTCTTGCTTAATTTTGGTTTTTTCATTTTCCACAGAGCACTAGAGCTTCCTCCATTAGATGTCGATGGATCCTTCGACTTCAACTCGCTGTCCTTACCATTCCATTGGGATGATATTTCCGAGTTGGAGGCTGAAATTTTGTCGTTGGACAAACACATGATACCAGTTACACCACTTTATGAGGAGCACATGGTGGCCGATGAGACGAAGCCGGAGAGAATGGTGAAATTAAAAGACGACGATATGAGTAGGGAGTTGCAGGAGGTGACAAGGATGATTGAAACAGGGCTTTCAAGTTGTAAAGAAGAAGAAGAAGAAGAGTATGAAAGGAGGGTGAGATTAATAATGAGAAACGGGAGGAGAACGAATTCAGTGTTGGGATTGGAAGAGATTCAAAAGCACTTTCATATCCCAATAACAGAGGCCGCAAAAGCGATGAATGTGGGTTTGACAGTGCTTAAAAGGAGGTGCAGAGAACTTCATATAATGAGATGGCCTCATAGAAAGCTCAAGAGCTTGAACTCTCTCATTACAAATGTCCAGGTTTGTATGTATACACATCCATCATTCTATATGTCTATTGATTCAAGTTCTTAGGACGCTCAACGTCGGTGTAATTTGGAAGTGCAGGAGATGGGGTTGACAAATGAGATAAAAGGGTTGGAGGAGCACAAGAGGCTTGTGGAGGAACTCCCAGATATGGACCTCACTCACAGAACCAGAAGGCTCAGGCAAGCCTGTTTCAAAGCCAATTACAAGAAGAAGCGAAGGTCCAATGTTGCTGCTCGTCACTAA

mRNA sequence

ATGGAGCCCAGCACCAAACTACACCCACACGACTTTGACTTTGAGTGGCCATATCACCAACATATTTTCCCCTTCGACCACGAAGCACTAGAGCTTCCTCCATTAGATGTCGATGGATCCTTCGACTTCAACTCGCTGTCCTTACCATTCCATTGGGATGATATTTCCGAGTTGGAGGCTGAAATTTTGTCGTTGGACAAACACATGATACCAGTTACACCACTTTATGAGGAGCACATGGTGGCCGATGAGACGAAGCCGGAGAGAATGGTGAAATTAAAAGACGACGATATGAGTAGGGAGTTGCAGGAGGTGACAAGGATGATTGAAACAGGGCTTTCAAGTTGTAAAGAAGAAGAAGAAGAAGAGTATGAAAGGAGGGTGAGATTAATAATGAGAAACGGGAGGAGAACGAATTCAGTGTTGGGATTGGAAGAGATTCAAAAGCACTTTCATATCCCAATAACAGAGGCCGCAAAAGCGATGAATGTGGGTTTGACAGTGCTTAAAAGGAGGTGCAGAGAACTTCATATAATGAGATGGCCTCATAGAAAGCTCAAGAGCTTGAACTCTCTCATTACAAATGTCCAGGAGATGGGGTTGACAAATGAGATAAAAGGGTTGGAGGAGCACAAGAGGCTTGTGGAGGAACTCCCAGATATGGACCTCACTCACAGAACCAGAAGGCTCAGGCAAGCCTGTTTCAAAGCCAATTACAAGAAGAAGCGAAGGTCCAATGTTGCTGCTCGTCACTAA

Coding sequence (CDS)

ATGGAGCCCAGCACCAAACTACACCCACACGACTTTGACTTTGAGTGGCCATATCACCAACATATTTTCCCCTTCGACCACGAAGCACTAGAGCTTCCTCCATTAGATGTCGATGGATCCTTCGACTTCAACTCGCTGTCCTTACCATTCCATTGGGATGATATTTCCGAGTTGGAGGCTGAAATTTTGTCGTTGGACAAACACATGATACCAGTTACACCACTTTATGAGGAGCACATGGTGGCCGATGAGACGAAGCCGGAGAGAATGGTGAAATTAAAAGACGACGATATGAGTAGGGAGTTGCAGGAGGTGACAAGGATGATTGAAACAGGGCTTTCAAGTTGTAAAGAAGAAGAAGAAGAAGAGTATGAAAGGAGGGTGAGATTAATAATGAGAAACGGGAGGAGAACGAATTCAGTGTTGGGATTGGAAGAGATTCAAAAGCACTTTCATATCCCAATAACAGAGGCCGCAAAAGCGATGAATGTGGGTTTGACAGTGCTTAAAAGGAGGTGCAGAGAACTTCATATAATGAGATGGCCTCATAGAAAGCTCAAGAGCTTGAACTCTCTCATTACAAATGTCCAGGAGATGGGGTTGACAAATGAGATAAAAGGGTTGGAGGAGCACAAGAGGCTTGTGGAGGAACTCCCAGATATGGACCTCACTCACAGAACCAGAAGGCTCAGGCAAGCCTGTTTCAAAGCCAATTACAAGAAGAAGCGAAGGTCCAATGTTGCTGCTCGTCACTAA

Protein sequence

MEPSTKLHPHDFDFEWPYHQHIFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEAEILSLDKHMIPVTPLYEEHMVADETKPERMVKLKDDDMSRELQEVTRMIETGLSSCKEEEEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRRSNVAARH
BLAST of Cp4.1LG09g00300 vs. Swiss-Prot
Match: RKD4_ARATH (Protein RKD4 OS=Arabidopsis thaliana GN=RKD4 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29
Identity = 62/108 (57.41%), Postives = 85/108 (78.70%), Query Frame = 1

Query: 136 RRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITN 195
           ++    L + EI++ F  PI +AAK +NVGLTVLK+RCREL I RWPHRKLKSLNSLI N
Sbjct: 142 KKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKN 201

Query: 196 VQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKR 244
           ++ +G+  E+K LEEH+ L+E+ PD +L+  T++LRQACFKANYK+++
Sbjct: 202 LKNVGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRK 249

BLAST of Cp4.1LG09g00300 vs. Swiss-Prot
Match: RKD2_ARATH (Protein RKD2 OS=Arabidopsis thaliana GN=RKD2 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26
Identity = 90/237 (37.97%), Postives = 138/237 (58.23%), Query Frame = 1

Query: 40  SFDFNSLSLP-FHWD-DISELE----AEILSLDKHMIPVT---PLYEEHMVA------DE 99
           SFD +SLS P F W+ D+  L+    ++        +P+    PL E+ + +      +E
Sbjct: 20  SFDHSSLSYPLFDWEEDLLALQENSGSQAFPFTTTSLPLPDLEPLSEDVLNSYSSASWNE 79

Query: 100 TKPERMVKLKDDDMSRELQEVTRMIETGLSSCKEEEEEEYERRVRLIMRNGRRTNS---- 159
           T+  R     D   S + +E   + ET  +  ++  E   E  VR+I      T S    
Sbjct: 80  TEQNR----GDGASSEKKRENGTVKET--TKKRKINERHREHSVRIISDITTYTTSSAPT 139

Query: 160 VLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITNVQEM- 219
            L  E + ++F++PIT+AA A+NVGLT+LKRRCREL I RWPHRKL SLN+LI+NV+E+ 
Sbjct: 140 TLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQ 199

Query: 220 ---------GLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRRSNV 248
                     L + ++ LE+ KR +E+LPD++   +T+RLRQACFKAN+K+K++ ++
Sbjct: 200 KMEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSL 250

BLAST of Cp4.1LG09g00300 vs. Swiss-Prot
Match: RKD1_ARATH (Protein RKD1 OS=Arabidopsis thaliana GN=RKD1 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-26
Identity = 65/142 (45.77%), Postives = 93/142 (65.49%), Query Frame = 1

Query: 117 KEEEEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCREL 176
           K E     +RR R    +    +  L  E I  +F++PIT+AA+ +N+GLT+LK+RCREL
Sbjct: 103 KSETTTTKKRRCREECFSSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCREL 162

Query: 177 HIMRWPHRKLKSLNSLITNVQEM----------GLTNEIKGLEEHKRLVEELPDMDLTHR 236
            I RWPHRKL SL  LI+NV+E+           L N ++ LE+ K+ +E+LPD+    +
Sbjct: 163 GIKRWPHRKLMSLQKLISNVKELEKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDK 222

Query: 237 TRRLRQACFKANYKKKRRSNVA 249
           T+RLRQACFKAN+K+KRRS ++
Sbjct: 223 TKRLRQACFKANHKRKRRSGMS 244

BLAST of Cp4.1LG09g00300 vs. Swiss-Prot
Match: RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana GN=RKD3 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.8e-25
Identity = 60/136 (44.12%), Postives = 95/136 (69.85%), Query Frame = 1

Query: 122 EEYERRVRLIMRNGRRTNSVLG---LEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHI 181
           +E   + R+IM+   R + V+     E ++++F++PIT+AAK +N+G+T+LK+RCREL I
Sbjct: 136 KEKTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGI 195

Query: 182 MRWPHRKLKSLNSLITNVQEM-----------GLTNEIKGLEEHKRLVEELPDMDLTHRT 241
            RWPHRKL SLN+LI N++++            L N ++ LE  K+++EE+PD++   +T
Sbjct: 196 PRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKT 255

Query: 242 RRLRQACFKANYKKKR 244
           +RLRQACFKA YK++R
Sbjct: 256 KRLRQACFKAKYKRRR 271

BLAST of Cp4.1LG09g00300 vs. Swiss-Prot
Match: RKD5_ARATH (Protein RKD5 OS=Arabidopsis thaliana GN=RKD5 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.0e-15
Identity = 73/260 (28.08%), Postives = 123/260 (47.31%), Query Frame = 1

Query: 22  IFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEAEILSLDKHMIPVTPLYEEHMV 81
           +F F+H     P L          LS     +DI  L  E+  + +  +  + +YEE   
Sbjct: 115 VFRFNHSLPRFPTL--------LCLSRNPKLEDIPNLANELKFISE--LKPSKIYEEEQC 174

Query: 82  ADET---------KPERMVKLKD-----DDMSRELQEVTRMIETGLSSCKEEEEEEYERR 141
           +  T         KP ++V  +D     D  +   + V    E       + E+ E + +
Sbjct: 175 SSSTEGYYNSDLPKPRKLVLKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSESDAK 234

Query: 142 VRLIMRNGR---RTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHR 201
             ++ +  R   R  + L LEE+ K+F + I EA++ + VGLTVLK++CRE  I RWPHR
Sbjct: 235 TEILKKKKRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHR 294

Query: 202 KLKSLNSLITNVQE-------------MGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLR 252
           K+KSL+ LI ++Q              M +  + + LE  KR + + P M++   T++ R
Sbjct: 295 KIKSLDCLIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFR 354

BLAST of Cp4.1LG09g00300 vs. TrEMBL
Match: E5GBA6_CUCME (Transcription factor OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 8.2e-48
Identity = 117/218 (53.67%), Postives = 151/218 (69.27%), Query Frame = 1

Query: 54  DISELEAEILSLDKHMIPVTPLYEEHMVADETKPERMVKLKDDD--------MSRELQEV 113
           D   L  ++  L   +  + PL  + ++   ++      L D+D        +SREL E+
Sbjct: 16  DFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDVLEFDSEFLSREL-EM 75

Query: 114 TRMIETGLSSC-----KEEEEEEYERRVRLIMRNG----RRTNSVLGLEEIQKHFHIPIT 173
             +   G SS      +EEEEEE E+R+RL+  N     R+ + VLGLEEI+K+FHIPI+
Sbjct: 76  VEIERNGFSSTWKEEEEEEEEEEGEKRLRLMGNNNGNKRRKGSFVLGLEEIRKYFHIPIS 135

Query: 174 EAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVE 233
           +AAK MNVGLTVLKRRCR+L+IMRWPHRK KSLNSLI NV+EMGLTNE+KGLEEHKRL+E
Sbjct: 136 KAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLTNEVKGLEEHKRLLE 195

Query: 234 ELPDMDLTHRTRRLRQACFKANYKKKRR---SNVAARH 252
           E+P+MDLTH  +RLRQACFKANYKK RR   +N+A+ H
Sbjct: 196 EMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLH 232

BLAST of Cp4.1LG09g00300 vs. TrEMBL
Match: A0A0A0L6Q6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239240 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.9e-45
Identity = 129/280 (46.07%), Postives = 171/280 (61.07%), Query Frame = 1

Query: 3   PSTKLHPHDFDFEWPYHQHIFPFDHEALE---LPP---LDVDGSFDFNSLSLPFH--WDD 62
           P T  +   FDFEW  H+ +FPF +E  E   L     LDV+ S    S  L  +   + 
Sbjct: 5   PQTFHNIPQFDFEW-LHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNVLEF 64

Query: 63  ISE-LEAEILSLDKHMIPVTPLYEEHMVADETKPERMVKLKDDDMSRELQEVTRMIETGL 122
            SE L  E+  +++  +P +   EE    +E + E   + ++++   E +E     E   
Sbjct: 65  ESEFLSREMDEIERKGLPSSTWKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 124

Query: 123 SSCKEEEEEEYE---------------RRVRLIMRNG----RRTNSVLGLEEIQKHFHIP 182
              +EEEEEE E               +R+RL+  N     R+ + VLGLEEI+K++HIP
Sbjct: 125 EEEEEEEEEEEEEEEEEEEEEEEEEGEKRLRLMRNNNGNKRRKRSFVLGLEEIKKYYHIP 184

Query: 183 ITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRL 242
           I+EAAK MNVGLTVLKRRCR+L+IMRWPHRKLKS NSLI NV+EMGLTNE+KGLEE KRL
Sbjct: 185 ISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQKRL 244

Query: 243 VEELPDMDLTHRTRRLRQACFKANYKKKRR---SNVAARH 252
           + E P+MDLTH T+RLRQACFK  Y+K RR   +N+A+ H
Sbjct: 245 LVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLH 283

BLAST of Cp4.1LG09g00300 vs. TrEMBL
Match: B9IDP6_POPTR (RWP-RK domain-containing family protein OS=Populus trichocarpa GN=POPTR_0015s01410g PE=4 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 1.8e-39
Identity = 93/139 (66.91%), Postives = 113/139 (81.29%), Query Frame = 1

Query: 114 SSCKEEEEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRC 173
           SS KEEEEEE E R      +GR+ +  LGLEEIQKHF++PIT+AA+ M VGLTVLK+RC
Sbjct: 124 SSVKEEEEEEEESR----KMSGRKRSVALGLEEIQKHFNMPITQAAREMKVGLTVLKKRC 183

Query: 174 RELHIMRWPHRKLKSLNSLITNVQEMGLTN-EIKGLEEHKRLVEELPDMDLTHRTRRLRQ 233
           REL IMRWPHRK+KSLNSLI NV+EMGL+  +   LEEHKRL+E+LPD++LT RT++LRQ
Sbjct: 184 RELKIMRWPHRKIKSLNSLINNVKEMGLSEYDTIMLEEHKRLIEKLPDLELTERTKKLRQ 243

Query: 234 ACFKANYKKKRRSNVAARH 252
           ACFKANYK++R S  AA H
Sbjct: 244 ACFKANYKRRRLS--AAYH 256

BLAST of Cp4.1LG09g00300 vs. TrEMBL
Match: A0A067JSK1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23923 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.1e-39
Identity = 111/235 (47.23%), Postives = 143/235 (60.85%), Query Frame = 1

Query: 10  HDFDFEWPYHQHIFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEAEILSLDKHM 69
           + FD +W      F    +  E PPL+    F+ +SL+LP H+ +      E ++LD   
Sbjct: 19  YSFDTDWLNLDDTF---QKVSEFPPLE--SFFELDSLTLP-HYKNYGFEGFEEINLD--- 78

Query: 70  IPVTPLYEEHMVADETKPERMVKLKDDDMSRELQEVTRMIETGLSSCKEEEEEEYERRVR 129
                  +++   D T       L D+   R  + V                 E ERR  
Sbjct: 79  ------IDDYSFLDSTL------LLDNPYDRYCENV-----------------EEERR-- 138

Query: 130 LIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSL 189
             +RNGR+ +  L +EEI+K+F +PIT+AAK MNVGLTVLK+RCREL+IMRWPHRKLKSL
Sbjct: 139 --LRNGRKMSVPLEMEEIKKYFDLPITKAAKEMNVGLTVLKKRCRELNIMRWPHRKLKSL 198

Query: 190 NSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRR 245
           NSLI NV+EMGL NEI  LEE KRLVE++PD +LT RT+RLRQACFKANYKKKR+
Sbjct: 199 NSLINNVKEMGLNNEIAMLEEDKRLVEDVPDTELTERTKRLRQACFKANYKKKRK 211

BLAST of Cp4.1LG09g00300 vs. TrEMBL
Match: A0A061G154_THECC (RWP-RK domain-containing protein, putative OS=Theobroma cacao GN=TCM_015430 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 9.0e-39
Identity = 115/247 (46.56%), Postives = 154/247 (62.35%), Query Frame = 1

Query: 13  DFEWPYHQHIFPFDHEALELPPLDVDGSFDFN-----SLSLPFHWDDISELEAEILSLDK 72
           DF+W ++    PF   ALEL P  VDG +DFN     SL+ P   + +   + E +S D 
Sbjct: 16  DFDW-FNFEENPFG-TALELLPFVVDGFYDFNDYNFNSLAPPGRINYVEFKDFEDISGDF 75

Query: 73  HMIPVT---PLYEEHMVADETKPERMV--------KLKDDDMSRELQEVTRMIETGLSSC 132
            +   T   P   E ++ D    + MV         + +   S E   V +  + G SS 
Sbjct: 76  ALFENTSTLPSLHEDILVDAKPLKAMVGPLGQYCGNITNIGGSSETLTVIQS-DYGASSG 135

Query: 133 KEEEEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCREL 192
             E+     RR+     +GR+  + L L+EIQK+F  PI++AAK MNVGLTVLK+RCREL
Sbjct: 136 HGEQ-----RRI-----SGRKRTAPLELDEIQKYFDFPISKAAKEMNVGLTVLKKRCREL 195

Query: 193 HIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFK 244
           +IMRWPHRK+KSL +LI NV+E+GLTNEI  LE+HKRL+E+LPDM+LT RT++LRQACFK
Sbjct: 196 NIMRWPHRKIKSLTALINNVKELGLTNEIMMLEDHKRLLEKLPDMELTERTKKLRQACFK 249

BLAST of Cp4.1LG09g00300 vs. TAIR10
Match: AT5G53040.1 (AT5G53040.1 RWP-RK domain-containing protein)

HSP 1 Score: 131.7 bits (330), Expect = 6.2e-31
Identity = 62/108 (57.41%), Postives = 85/108 (78.70%), Query Frame = 1

Query: 136 RRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITN 195
           ++    L + EI++ F  PI +AAK +NVGLTVLK+RCREL I RWPHRKLKSLNSLI N
Sbjct: 142 KKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKN 201

Query: 196 VQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKR 244
           ++ +G+  E+K LEEH+ L+E+ PD +L+  T++LRQACFKANYK+++
Sbjct: 202 LKNVGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRK 249

BLAST of Cp4.1LG09g00300 vs. TAIR10
Match: AT1G74480.1 (AT1G74480.1 RWP-RK domain-containing protein)

HSP 1 Score: 121.7 bits (304), Expect = 6.4e-28
Identity = 90/237 (37.97%), Postives = 138/237 (58.23%), Query Frame = 1

Query: 40  SFDFNSLSLP-FHWD-DISELE----AEILSLDKHMIPVT---PLYEEHMVA------DE 99
           SFD +SLS P F W+ D+  L+    ++        +P+    PL E+ + +      +E
Sbjct: 20  SFDHSSLSYPLFDWEEDLLALQENSGSQAFPFTTTSLPLPDLEPLSEDVLNSYSSASWNE 79

Query: 100 TKPERMVKLKDDDMSRELQEVTRMIETGLSSCKEEEEEEYERRVRLIMRNGRRTNS---- 159
           T+  R     D   S + +E   + ET  +  ++  E   E  VR+I      T S    
Sbjct: 80  TEQNR----GDGASSEKKRENGTVKET--TKKRKINERHREHSVRIISDITTYTTSSAPT 139

Query: 160 VLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITNVQEM- 219
            L  E + ++F++PIT+AA A+NVGLT+LKRRCREL I RWPHRKL SLN+LI+NV+E+ 
Sbjct: 140 TLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQ 199

Query: 220 ---------GLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRRSNV 248
                     L + ++ LE+ KR +E+LPD++   +T+RLRQACFKAN+K+K++ ++
Sbjct: 200 KMEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSL 250

BLAST of Cp4.1LG09g00300 vs. TAIR10
Match: AT1G18790.1 (AT1G18790.1 RWP-RK domain-containing protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 65/142 (45.77%), Postives = 93/142 (65.49%), Query Frame = 1

Query: 117 KEEEEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCREL 176
           K E     +RR R    +    +  L  E I  +F++PIT+AA+ +N+GLT+LK+RCREL
Sbjct: 103 KSETTTTKKRRCREECFSSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCREL 162

Query: 177 HIMRWPHRKLKSLNSLITNVQEM----------GLTNEIKGLEEHKRLVEELPDMDLTHR 236
            I RWPHRKL SL  LI+NV+E+           L N ++ LE+ K+ +E+LPD+    +
Sbjct: 163 GIKRWPHRKLMSLQKLISNVKELEKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDK 222

Query: 237 TRRLRQACFKANYKKKRRSNVA 249
           T+RLRQACFKAN+K+KRRS ++
Sbjct: 223 TKRLRQACFKANHKRKRRSGMS 244

BLAST of Cp4.1LG09g00300 vs. TAIR10
Match: AT5G66990.1 (AT5G66990.1 RWP-RK domain-containing protein)

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-26
Identity = 60/136 (44.12%), Postives = 95/136 (69.85%), Query Frame = 1

Query: 122 EEYERRVRLIMRNGRRTNSVLG---LEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHI 181
           +E   + R+IM+   R + V+     E ++++F++PIT+AAK +N+G+T+LK+RCREL I
Sbjct: 136 KEKTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGI 195

Query: 182 MRWPHRKLKSLNSLITNVQEM-----------GLTNEIKGLEEHKRLVEELPDMDLTHRT 241
            RWPHRKL SLN+LI N++++            L N ++ LE  K+++EE+PD++   +T
Sbjct: 196 PRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKT 255

Query: 242 RRLRQACFKANYKKKR 244
           +RLRQACFKA YK++R
Sbjct: 256 KRLRQACFKAKYKRRR 271

BLAST of Cp4.1LG09g00300 vs. TAIR10
Match: AT4G35590.1 (AT4G35590.1 RWP-RK domain-containing protein)

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16
Identity = 73/260 (28.08%), Postives = 123/260 (47.31%), Query Frame = 1

Query: 22  IFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEAEILSLDKHMIPVTPLYEEHMV 81
           +F F+H     P L          LS     +DI  L  E+  + +  +  + +YEE   
Sbjct: 115 VFRFNHSLPRFPTL--------LCLSRNPKLEDIPNLANELKFISE--LKPSKIYEEEQC 174

Query: 82  ADET---------KPERMVKLKD-----DDMSRELQEVTRMIETGLSSCKEEEEEEYERR 141
           +  T         KP ++V  +D     D  +   + V    E       + E+ E + +
Sbjct: 175 SSSTEGYYNSDLPKPRKLVLKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSESDAK 234

Query: 142 VRLIMRNGR---RTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHR 201
             ++ +  R   R  + L LEE+ K+F + I EA++ + VGLTVLK++CRE  I RWPHR
Sbjct: 235 TEILKKKKRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHR 294

Query: 202 KLKSLNSLITNVQE-------------MGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLR 252
           K+KSL+ LI ++Q              M +  + + LE  KR + + P M++   T++ R
Sbjct: 295 KIKSLDCLIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFR 354

BLAST of Cp4.1LG09g00300 vs. NCBI nr
Match: gi|659133656|ref|XP_008466842.1| (PREDICTED: protein RKD4 [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47
Identity = 117/218 (53.67%), Postives = 151/218 (69.27%), Query Frame = 1

Query: 54  DISELEAEILSLDKHMIPVTPLYEEHMVADETKPERMVKLKDDD--------MSRELQEV 113
           D   L  ++  L   +  + PL  + ++   ++      L D+D        +SREL E+
Sbjct: 16  DFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDVLEFDSEFLSREL-EM 75

Query: 114 TRMIETGLSSC-----KEEEEEEYERRVRLIMRNG----RRTNSVLGLEEIQKHFHIPIT 173
             +   G SS      +EEEEEE E+R+RL+  N     R+ + VLGLEEI+K+FHIPI+
Sbjct: 76  VEIERNGFSSTWKEEEEEEEEEEGEKRLRLMGNNNGNKRRKGSFVLGLEEIRKYFHIPIS 135

Query: 174 EAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVE 233
           +AAK MNVGLTVLKRRCR+L+IMRWPHRK KSLNSLI NV+EMGLTNE+KGLEEHKRL+E
Sbjct: 136 KAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLTNEVKGLEEHKRLLE 195

Query: 234 ELPDMDLTHRTRRLRQACFKANYKKKRR---SNVAARH 252
           E+P+MDLTH  +RLRQACFKANYKK RR   +N+A+ H
Sbjct: 196 EMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLH 232

BLAST of Cp4.1LG09g00300 vs. NCBI nr
Match: gi|700202527|gb|KGN57660.1| (hypothetical protein Csa_3G239240 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 4.2e-45
Identity = 129/280 (46.07%), Postives = 171/280 (61.07%), Query Frame = 1

Query: 3   PSTKLHPHDFDFEWPYHQHIFPFDHEALE---LPP---LDVDGSFDFNSLSLPFH--WDD 62
           P T  +   FDFEW  H+ +FPF +E  E   L     LDV+ S    S  L  +   + 
Sbjct: 5   PQTFHNIPQFDFEW-LHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNVLEF 64

Query: 63  ISE-LEAEILSLDKHMIPVTPLYEEHMVADETKPERMVKLKDDDMSRELQEVTRMIETGL 122
            SE L  E+  +++  +P +   EE    +E + E   + ++++   E +E     E   
Sbjct: 65  ESEFLSREMDEIERKGLPSSTWKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 124

Query: 123 SSCKEEEEEEYE---------------RRVRLIMRNG----RRTNSVLGLEEIQKHFHIP 182
              +EEEEEE E               +R+RL+  N     R+ + VLGLEEI+K++HIP
Sbjct: 125 EEEEEEEEEEEEEEEEEEEEEEEEEGEKRLRLMRNNNGNKRRKRSFVLGLEEIKKYYHIP 184

Query: 183 ITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRL 242
           I+EAAK MNVGLTVLKRRCR+L+IMRWPHRKLKS NSLI NV+EMGLTNE+KGLEE KRL
Sbjct: 185 ISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQKRL 244

Query: 243 VEELPDMDLTHRTRRLRQACFKANYKKKRR---SNVAARH 252
           + E P+MDLTH T+RLRQACFK  Y+K RR   +N+A+ H
Sbjct: 245 LVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLH 283

BLAST of Cp4.1LG09g00300 vs. NCBI nr
Match: gi|694321765|ref|XP_009352035.1| (PREDICTED: protein RKD4-like [Pyrus x bretschneideri])

HSP 1 Score: 173.7 bits (439), Expect = 4.0e-40
Identity = 112/257 (43.58%), Postives = 154/257 (59.92%), Query Frame = 1

Query: 3   PSTKLHPHDFDFEWPYHQHIFPFDHEALELPPLDVDGSFDFNSLSLPFHWD--------- 62
           P  +  PH+F+   PY+Q   P   ++  L  L ++    F S  LP  ++         
Sbjct: 12  PKIETDPHEFNSSIPYYQD--PCQDQSAALESLRLENFSQFTSPPLPLQYNPNQLPQMGS 71

Query: 63  -DISELEAEILSLDKHMIPVTPLYEEHMVADETKPERMVK--LKDDDMSRELQEVTRMIE 122
            D  +L      LD   +P    YE   V DE     M +  +  + +S +  +V RM++
Sbjct: 72  QDFEDLGIWDYILDDAALPSPFDYE---VVDENPLTTMAESIVCSNSVSGDSGDVFRMLD 131

Query: 123 TGLSSCKEEEEEEYERRVRLIMRNG----RRTNSVLGLEEIQKHFHIPITEAAKAMNVGL 182
            G+ S  + + E        + +NG    R + + L L+EIQK+F +PIT+AAK + VGL
Sbjct: 132 WGMESWGKYDGEG-------MTKNGSCSKRMSAAPLELDEIQKYFDVPITQAAKELKVGL 191

Query: 183 TVLKRRCRELHIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHR 242
           TVLKRRCREL+IMRWPHRKL+SLN+LI NV+ MGLTNE++ LEEHKRL+E+LPDM+L  R
Sbjct: 192 TVLKRRCRELNIMRWPHRKLRSLNALIENVKGMGLTNELRMLEEHKRLLEQLPDMELPER 251

Query: 243 TRRLRQACFKANYKKKR 244
            +RLRQACFKANYKKKR
Sbjct: 252 AKRLRQACFKANYKKKR 256

BLAST of Cp4.1LG09g00300 vs. NCBI nr
Match: gi|566205376|ref|XP_002321399.2| (RWP-RK domain-containing family protein [Populus trichocarpa])

HSP 1 Score: 171.0 bits (432), Expect = 2.6e-39
Identity = 93/139 (66.91%), Postives = 113/139 (81.29%), Query Frame = 1

Query: 114 SSCKEEEEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRC 173
           SS KEEEEEE E R      +GR+ +  LGLEEIQKHF++PIT+AA+ M VGLTVLK+RC
Sbjct: 124 SSVKEEEEEEEESR----KMSGRKRSVALGLEEIQKHFNMPITQAAREMKVGLTVLKKRC 183

Query: 174 RELHIMRWPHRKLKSLNSLITNVQEMGLTN-EIKGLEEHKRLVEELPDMDLTHRTRRLRQ 233
           REL IMRWPHRK+KSLNSLI NV+EMGL+  +   LEEHKRL+E+LPD++LT RT++LRQ
Sbjct: 184 RELKIMRWPHRKIKSLNSLINNVKEMGLSEYDTIMLEEHKRLIEKLPDLELTERTKKLRQ 243

Query: 234 ACFKANYKKKRRSNVAARH 252
           ACFKANYK++R S  AA H
Sbjct: 244 ACFKANYKRRRLS--AAYH 256

BLAST of Cp4.1LG09g00300 vs. NCBI nr
Match: gi|802732773|ref|XP_012086468.1| (PREDICTED: protein RKD4 [Jatropha curcas])

HSP 1 Score: 170.2 bits (430), Expect = 4.5e-39
Identity = 111/235 (47.23%), Postives = 143/235 (60.85%), Query Frame = 1

Query: 10  HDFDFEWPYHQHIFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEAEILSLDKHM 69
           + FD +W      F    +  E PPL+    F+ +SL+LP H+ +      E ++LD   
Sbjct: 19  YSFDTDWLNLDDTF---QKVSEFPPLE--SFFELDSLTLP-HYKNYGFEGFEEINLD--- 78

Query: 70  IPVTPLYEEHMVADETKPERMVKLKDDDMSRELQEVTRMIETGLSSCKEEEEEEYERRVR 129
                  +++   D T       L D+   R  + V                 E ERR  
Sbjct: 79  ------IDDYSFLDSTL------LLDNPYDRYCENV-----------------EEERR-- 138

Query: 130 LIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSL 189
             +RNGR+ +  L +EEI+K+F +PIT+AAK MNVGLTVLK+RCREL+IMRWPHRKLKSL
Sbjct: 139 --LRNGRKMSVPLEMEEIKKYFDLPITKAAKEMNVGLTVLKKRCRELNIMRWPHRKLKSL 198

Query: 190 NSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRR 245
           NSLI NV+EMGL NEI  LEE KRLVE++PD +LT RT+RLRQACFKANYKKKR+
Sbjct: 199 NSLINNVKEMGLNNEIAMLEEDKRLVEDVPDTELTERTKRLRQACFKANYKKKRK 211

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RKD4_ARATH1.1e-2957.41Protein RKD4 OS=Arabidopsis thaliana GN=RKD4 PE=3 SV=1[more]
RKD2_ARATH1.1e-2637.97Protein RKD2 OS=Arabidopsis thaliana GN=RKD2 PE=2 SV=1[more]
RKD1_ARATH1.9e-2645.77Protein RKD1 OS=Arabidopsis thaliana GN=RKD1 PE=3 SV=1[more]
RKD3_ARATH2.8e-2544.12Protein RKD3 OS=Arabidopsis thaliana GN=RKD3 PE=3 SV=1[more]
RKD5_ARATH2.0e-1528.08Protein RKD5 OS=Arabidopsis thaliana GN=RKD5 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
E5GBA6_CUCME8.2e-4853.67Transcription factor OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0L6Q6_CUCSA2.9e-4546.07Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239240 PE=4 SV=1[more]
B9IDP6_POPTR1.8e-3966.91RWP-RK domain-containing family protein OS=Populus trichocarpa GN=POPTR_0015s014... [more]
A0A067JSK1_JATCU3.1e-3947.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23923 PE=4 SV=1[more]
A0A061G154_THECC9.0e-3946.56RWP-RK domain-containing protein, putative OS=Theobroma cacao GN=TCM_015430 PE=4... [more]
Match NameE-valueIdentityDescription
AT5G53040.16.2e-3157.41 RWP-RK domain-containing protein[more]
AT1G74480.16.4e-2837.97 RWP-RK domain-containing protein[more]
AT1G18790.11.1e-2745.77 RWP-RK domain-containing protein[more]
AT5G66990.11.6e-2644.12 RWP-RK domain-containing protein[more]
AT4G35590.11.1e-1628.08 RWP-RK domain-containing protein[more]
Match NameE-valueIdentityDescription
gi|659133656|ref|XP_008466842.1|1.2e-4753.67PREDICTED: protein RKD4 [Cucumis melo][more]
gi|700202527|gb|KGN57660.1|4.2e-4546.07hypothetical protein Csa_3G239240 [Cucumis sativus][more]
gi|694321765|ref|XP_009352035.1|4.0e-4043.58PREDICTED: protein RKD4-like [Pyrus x bretschneideri][more]
gi|566205376|ref|XP_002321399.2|2.6e-3966.91RWP-RK domain-containing family protein [Populus trichocarpa][more]
gi|802732773|ref|XP_012086468.1|4.5e-3947.23PREDICTED: protein RKD4 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009790 embryo development
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g00300.1Cp4.1LG09g00300.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 142..189
score: 1.4
IPR003035RWP-RK domainPROFILEPS51519RWP_RKcoord: 120..211
score: 17
NoneNo IPR availablePANTHERPTHR10270SOX TRANSCRIPTION FACTORcoord: 93..245
score: 8.5
NoneNo IPR availablePANTHERPTHR10270:SF230SUBFAMILY NOT NAMEDcoord: 93..245
score: 8.5

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g00300Cucurbita pepo (Zucchini)cpecpeB021
Cp4.1LG09g00300Cucurbita pepo (Zucchini)cpecpeB023
Cp4.1LG09g00300Cucurbita pepo (Zucchini)cpecpeB024
Cp4.1LG09g00300Cucurbita pepo (Zucchini)cpecpeB057
Cp4.1LG09g00300Cucumber (Gy14) v1cgycpeB0004
Cp4.1LG09g00300Cucumber (Gy14) v1cgycpeB0570
Cp4.1LG09g00300Cucurbita maxima (Rimu)cmacpeB301
Cp4.1LG09g00300Cucurbita maxima (Rimu)cmacpeB339
Cp4.1LG09g00300Cucurbita maxima (Rimu)cmacpeB340
Cp4.1LG09g00300Cucurbita maxima (Rimu)cmacpeB598
Cp4.1LG09g00300Cucurbita moschata (Rifu)cmocpeB264
Cp4.1LG09g00300Cucurbita moschata (Rifu)cmocpeB303
Cp4.1LG09g00300Cucurbita moschata (Rifu)cmocpeB304
Cp4.1LG09g00300Cucurbita moschata (Rifu)cmocpeB546
Cp4.1LG09g00300Wild cucumber (PI 183967)cpecpiB032
Cp4.1LG09g00300Wild cucumber (PI 183967)cpecpiB038
Cp4.1LG09g00300Cucumber (Chinese Long) v2cpecuB036
Cp4.1LG09g00300Cucumber (Chinese Long) v2cpecuB043
Cp4.1LG09g00300Bottle gourd (USVL1VR-Ls)cpelsiB019
Cp4.1LG09g00300Bottle gourd (USVL1VR-Ls)cpelsiB036
Cp4.1LG09g00300Bottle gourd (USVL1VR-Ls)cpelsiB037
Cp4.1LG09g00300Watermelon (Charleston Gray)cpewcgB022
Cp4.1LG09g00300Watermelon (Charleston Gray)cpewcgB046
Cp4.1LG09g00300Watermelon (97103) v1cpewmB032
Cp4.1LG09g00300Watermelon (97103) v1cpewmB035
Cp4.1LG09g00300Melon (DHL92) v3.5.1cpemeB017
Cp4.1LG09g00300Melon (DHL92) v3.5.1cpemeB043
Cp4.1LG09g00300Cucumber (Gy14) v2cgybcpeB285
Cp4.1LG09g00300Cucumber (Gy14) v2cgybcpeB583
Cp4.1LG09g00300Melon (DHL92) v3.6.1cpemedB020
Cp4.1LG09g00300Melon (DHL92) v3.6.1cpemedB051
Cp4.1LG09g00300Silver-seed gourdcarcpeB0712
Cp4.1LG09g00300Silver-seed gourdcarcpeB1373
Cp4.1LG09g00300Silver-seed gourdcarcpeB1374
Cp4.1LG09g00300Cucumber (Chinese Long) v3cpecucB0036
Cp4.1LG09g00300Cucumber (Chinese Long) v3cpecucB0046
Cp4.1LG09g00300Wax gourdcpewgoB0021
Cp4.1LG09g00300Wax gourdcpewgoB0028