CsaV3_3G019780 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G019780
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRWP-RK domain-containing protein, putative
Locationchr3 : 15608830 .. 15609539 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAATAATAATGGTAATAAGAGGAGGAAAAGAAGTTTTGTGTTGGGATTGGAAGAGATTAAGAAGTACTATCATATACCAATATCAGAAGCAGCAAAAGAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACTTAAGAGCTACAATTCTCTCATCCAAAATGTCAAGGTATGTGTATCATTTATAAGTATTTATTATTCTACACATCCAAATTTTGTGGGTTACTATCTAATTCTATTCTTTACTAATGTTTTTTAAAATCCAATTAAATTTATAATTTTTTTATAAAAAAAAAATAGGATAACCATTTAATTTTTTGTGTAAAAAAGTTGAATTCTTAAGGAACTTCCAAAAATAAAAACTTGTTTTTGAAATATATTTTTATTTAGTTTTCAAATGTTAGGTATTCATTTGAAAAAGAATCCAAAGATGTTGACTAGATGGAAATGTTGTTAATAGTTTAAATGTTGTAAGAATTGTGTTGGCAGGAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCAAAAGAGGCTATTGGTGGAATCGCCAAATATGGACCTCACACACACAACCAAAAGGCTAAGGCAAGCTTGCTTCAAAGACAAATACAGGAAAAACAGAAGACTTAGGTCTAATAATATTGCTTCTCTTCATCACTAG

mRNA sequence

ATGAGAAATAATAATGGTAATAAGAGGAGGAAAAGAAGTTTTGTGTTGGGATTGGAAGAGATTAAGAAGTACTATCATATACCAATATCAGAAGCAGCAAAAGAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACTTAAGAGCTACAATTCTCTCATCCAAAATGTCAAGGAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCAAAAGAGGCTATTGGTGGAATCGCCAAATATGGACCTCACACACACAACCAAAAGGCTAAGGCAAGCTTGCTTCAAAGACAAATACAGGAAAAACAGAAGACTTAGGTCTAATAATATTGCTTCTCTTCATCACTAG

Coding sequence (CDS)

ATGAGAAATAATAATGGTAATAAGAGGAGGAAAAGAAGTTTTGTGTTGGGATTGGAAGAGATTAAGAAGTACTATCATATACCAATATCAGAAGCAGCAAAAGAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACTTAAGAGCTACAATTCTCTCATCCAAAATGTCAAGGAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCAAAAGAGGCTATTGGTGGAATCGCCAAATATGGACCTCACACACACAACCAAAAGGCTAAGGCAAGCTTGCTTCAAAGACAAATACAGGAAAAACAGAAGACTTAGGTCTAATAATATTGCTTCTCTTCATCACTAG

Protein sequence

MRNNNGNKRRKRSFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH
Homology
[Close]
BLAST of CsaV3_3G019780 vs. NCBI nr
Match: KGN57660.1 (hypothetical protein Csa_3G239240 [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 3.3e-58
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 14  FVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM 73
           FVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM
Sbjct: 169 FVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM 228

Query: 74  GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH 130
           GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH
Sbjct: 229 GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH 284

[Close]
BLAST of CsaV3_3G019780 vs. NCBI nr
Match: XP_008466842.1 (PREDICTED: protein RKD4 [Cucumis melo] >ADN33747.1 transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 211.1 bits (536), Expect = 2.3e-51
Identity = 105/117 (89.74%), Postives = 109/117 (93.16%), Query Frame = 0 

Query: 13  SFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKE 72
           SFVLGLEEI+KY+HIPIS+AAKEMNVGLTVLKRRCRQLNIMRWPHRK KS NSLIQNVKE
Sbjct: 117 SFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE 176

Query: 73  MGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH 130
           MGLTNEVKGLEE KRLL E PNMDLTHT KRLRQACFK  Y+KNRRLRSNNIASLHH
Sbjct: 177 MGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH 233

[Close]
BLAST of CsaV3_3G019780 vs. NCBI nr
Match: XP_022141143.1 (protein RKD4 [Momordica charantia])

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-41
Identity = 91/127 (71.65%), Postives = 108/127 (85.04%), Query Frame = 0 

Query: 2   RNNNGNKRRKRSFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLK 61
           R NN   RR +S VLGLEEI+ ++HIPISEAAK+MNVGLTVLK+RCR+LNIMRWPHRKLK
Sbjct: 126 RRNNMRLRRSKSSVLGLEEIQNHFHIPISEAAKQMNVGLTVLKKRCRELNIMRWPHRKLK 185

Query: 62  SYNSLIQNVKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRS 121
           S NSLI+NVKEMGL++E+K LEE KRL+ E P+MDLTH TKRLRQACFK  Y+K RR  +
Sbjct: 186 SLNSLIKNVKEMGLSSEIKVLEEHKRLVEELPDMDLTHRTKRLRQACFKANYKK-RRSNN 245

Query: 122 NNIASLH 129
           N+ A+LH
Sbjct: 246 NSFATLH 251

[Close]
BLAST of CsaV3_3G019780 vs. NCBI nr
Match: XP_022968161.1 (protein RKD4 [Cucurbita maxima])

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-41
Identity = 89/119 (74.79%), Postives = 104/119 (87.39%), Query Frame = 0 

Query: 10  RKRSFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQN 69
           R++S VLGLEEI+K++HIPI+EAAK M+VGLTVLKRRCR+LNIMRWPHRKLKS NSLI N
Sbjct: 136 RRKSSVLGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSLNSLITN 195

Query: 70  VKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLH 129
           V+EMGLTNE+KGLEE KRL+ E PNMDLTH T+RLRQACFK  Y+K RR   +N+A LH
Sbjct: 196 VQEMGLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANYKKKRR---SNVAVLH 251

[Close]
BLAST of CsaV3_3G019780 vs. NCBI nr
Match: XP_023542025.1 (protein RKD2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.3 bits (438), Expect = 5.3e-40
Identity = 86/119 (72.27%), Postives = 103/119 (86.55%), Query Frame = 0 

Query: 10  RKRSFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQN 69
           R+ + VLGLEEI+K++HIPI+EAAK MNVGLTVLKRRCR+L+IMRWPHRKLKS NSLI N
Sbjct: 161 RRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITN 220

Query: 70  VKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLH 129
           V+EMGLTNE+KGLEE KRL+ E P+MDLTH T+RLRQACFK  Y+K RR   +N+A+ H
Sbjct: 221 VQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRR---SNVAARH 276

[Close]
BLAST of CsaV3_3G019780 vs. TAIR10
Match: AT5G53040.1 (RWP-RK domain-containing protein)

HSP 1 Score: 128.6 bits (322), Expect = 2.7e-30
Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 0 

Query: 7   NKRRKRSFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSL 66
           N ++KR   L + EIK+++  PI +AAKE+NVGLTVLK+RCR+L I RWPHRKLKS NSL
Sbjct: 139 NLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSL 198

Query: 67  IQNVKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRL 120
           I+N+K +G+  EVK LEE + L+ + P+ +L+  TK+LRQACFK  Y++ + L
Sbjct: 199 IKNLKNVGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRKSL 251

[Close]
BLAST of CsaV3_3G019780 vs. TAIR10
Match: AT5G66990.1 (RWP-RK domain-containing protein)

HSP 1 Score: 107.8 bits (268), Expect = 5.0e-24
Identity = 53/116 (45.69%), Postives = 83/116 (71.55%), Query Frame = 0 

Query: 19  EEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM----- 78
           E +K+Y+++PI++AAKE+N+G+T+LK+RCR+L I RWPHRKL S N+LI N+K++     
Sbjct: 162 EMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTK 221

Query: 79  ------GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNN 124
                  L N ++ LE +K+++ E P+++    TKRLRQACFK KY++ R   S++
Sbjct: 222 GRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

[Close]
BLAST of CsaV3_3G019780 vs. TAIR10
Match: AT1G74480.1 (RWP-RK domain-containing protein)

HSP 1 Score: 104.8 bits (260), Expect = 4.2e-23
Identity = 56/119 (47.06%), Postives = 81/119 (68.07%), Query Frame = 0 

Query: 16  LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM-- 75
           L  E + +Y+++PI++AA  +NVGLT+LKRRCR+L I RWPHRKL S N+LI NVKE+  
Sbjct: 135 LSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQK 194

Query: 76  --------GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFK--DKYRKNRRLRSN 123
                    L + ++ LE++KR + + P+++    TKRLRQACFK   K +K R L+S+
Sbjct: 195 MEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSLKSD 253

[Close]
BLAST of CsaV3_3G019780 vs. TAIR10
Match: AT1G18790.1 (RWP-RK domain-containing protein)

HSP 1 Score: 95.1 bits (235), Expect = 3.3e-20
Identity = 51/119 (42.86%), Postives = 73/119 (61.34%), Query Frame = 0 

Query: 13  SFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKE 72
           S  L  E I  Y+++PI++AA+E+N+GLT+LK+RCR+L I RWPHRKL S   LI NVKE
Sbjct: 125 SKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKE 184

Query: 73  MGLTNEVKGLEEQKRL-------------LVESPNMDLTHTTKRLRQACFKDKYRKNRR 119
           +    +++G E + +L                 P++     TKRLRQACFK  +++ RR
Sbjct: 185 L---EKMEGEENEDKLRNXXXXXXXXXXXXXXXPDLKFEDKTKRLRQACFKANHKRKRR 240

[Close]
BLAST of CsaV3_3G019780 vs. TAIR10
Match: AT4G35590.1 (RWP-RK domain-containing protein)

HSP 1 Score: 85.9 bits (211), Expect = 2.0e-17
Identity = 45/115 (39.13%), Postives = 71/115 (61.74%), Query Frame = 0 

Query: 16  LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKE--- 75
           L LEE+ KY+ + I EA++ + VGLTVLK++CR+  I RWPHRK+KS + LI +++    
Sbjct: 242 LSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAE 301

Query: 76  ----------MGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNR 118
                     M +  + + LE +KR +V+ P M++   TK+ RQ  FK ++R +R
Sbjct: 302 KQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASR 356

[Close]
BLAST of CsaV3_3G019780 vs. Swiss-Prot
Match: sp|Q9LVU8|RKD4_ARATH (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-29
Identity = 62/113 (54.87%), Postives = 86/113 (76.11%), Query Frame = 0 

Query: 7   NKRRKRSFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSL 66
           N ++KR   L + EIK+++  PI +AAKE+NVGLTVLK+RCR+L I RWPHRKLKS NSL
Sbjct: 139 NLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSL 198

Query: 67  IQNVKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRL 120
           I+N+K +G+  EVK LEE + L+ + P+ +L+  TK+LRQACFK  Y++ + L
Sbjct: 199 IKNLKNVGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRKSL 251

[Close]
BLAST of CsaV3_3G019780 vs. Swiss-Prot
Match: sp|Q9FGD1|RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.0e-23
Identity = 53/116 (45.69%), Postives = 83/116 (71.55%), Query Frame = 0 

Query: 19  EEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM----- 78
           E +K+Y+++PI++AAKE+N+G+T+LK+RCR+L I RWPHRKL S N+LI N+K++     
Sbjct: 162 EMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTK 221

Query: 79  ------GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNN 124
                  L N ++ LE +K+++ E P+++    TKRLRQACFK KY++ R   S++
Sbjct: 222 GRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

[Close]
BLAST of CsaV3_3G019780 vs. Swiss-Prot
Match: sp|Q9CA66|RKD2_ARATH (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.6e-22
Identity = 56/119 (47.06%), Postives = 81/119 (68.07%), Query Frame = 0 

Query: 16  LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM-- 75
           L  E + +Y+++PI++AA  +NVGLT+LKRRCR+L I RWPHRKL S N+LI NVKE+  
Sbjct: 135 LSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQK 194

Query: 76  --------GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFK--DKYRKNRRLRSN 123
                    L + ++ LE++KR + + P+++    TKRLRQACFK   K +K R L+S+
Sbjct: 195 MEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSLKSD 253

[Close]
BLAST of CsaV3_3G019780 vs. Swiss-Prot
Match: sp|Q9M9U9|RKD1_ARATH (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 6.0e-19
Identity = 51/119 (42.86%), Postives = 73/119 (61.34%), Query Frame = 0 

Query: 13  SFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKE 72
           S  L  E I  Y+++PI++AA+E+N+GLT+LK+RCR+L I RWPHRKL S   LI NVKE
Sbjct: 125 SKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKE 184

Query: 73  MGLTNEVKGLEEQKRL-------------LVESPNMDLTHTTKRLRQACFKDKYRKNRR 119
           +    +++G E + +L                 P++     TKRLRQACFK  +++ RR
Sbjct: 185 L---EKMEGEENEDKLRNXXXXXXXXXXXXXXXPDLKFEDKTKRLRQACFKANHKRKRR 240

[Close]
BLAST of CsaV3_3G019780 vs. Swiss-Prot
Match: sp|O81791|RKD5_ARATH (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.6e-16
Identity = 45/115 (39.13%), Postives = 71/115 (61.74%), Query Frame = 0 

Query: 16  LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKE--- 75
           L LEE+ KY+ + I EA++ + VGLTVLK++CR+  I RWPHRK+KS + LI +++    
Sbjct: 242 LSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAE 301

Query: 76  ----------MGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNR 118
                     M +  + + LE +KR +V+ P M++   TK+ RQ  FK ++R +R
Sbjct: 302 KQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASR 356

[Close]
BLAST of CsaV3_3G019780 vs. TrEMBL
Match: tr|A0A0A0L6Q6|A0A0A0L6Q6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239240 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.2e-58
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 14  FVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM 73
           FVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM
Sbjct: 169 FVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM 228

Query: 74  GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH 130
           GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH
Sbjct: 229 GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH 284

[Close]
BLAST of CsaV3_3G019780 vs. TrEMBL
Match: tr|A0A1S3CS47|A0A1S3CS47_CUCME (protein RKD4 OS=Cucumis melo OX=3656 GN=LOC103504148 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.5e-51
Identity = 105/117 (89.74%), Postives = 109/117 (93.16%), Query Frame = 0 

Query: 13  SFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKE 72
           SFVLGLEEI+KY+HIPIS+AAKEMNVGLTVLKRRCRQLNIMRWPHRK KS NSLIQNVKE
Sbjct: 117 SFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE 176

Query: 73  MGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH 130
           MGLTNEVKGLEE KRLL E PNMDLTHT KRLRQACFK  Y+KNRRLRSNNIASLHH
Sbjct: 177 MGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH 233

[Close]
BLAST of CsaV3_3G019780 vs. TrEMBL
Match: tr|E5GBA6|E5GBA6_CUCME (Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.5e-51
Identity = 105/117 (89.74%), Postives = 109/117 (93.16%), Query Frame = 0 

Query: 13  SFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKE 72
           SFVLGLEEI+KY+HIPIS+AAKEMNVGLTVLKRRCRQLNIMRWPHRK KS NSLIQNVKE
Sbjct: 117 SFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKE 176

Query: 73  MGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH 130
           MGLTNEVKGLEE KRLL E PNMDLTHT KRLRQACFK  Y+KNRRLRSNNIASLHH
Sbjct: 177 MGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH 233

[Close]
BLAST of CsaV3_3G019780 vs. TrEMBL
Match: tr|A0A067JSK1|A0A067JSK1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23923 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.2e-34
Identity = 77/114 (67.54%), Postives = 91/114 (79.82%), Query Frame = 0 

Query: 10  RKRSFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQN 69
           RK S  L +EEIKKY+ +PI++AAKEMNVGLTVLK+RCR+LNIMRWPHRKLKS NSLI N
Sbjct: 103 RKMSVPLEMEEIKKYFDLPITKAAKEMNVGLTVLKKRCRELNIMRWPHRKLKSLNSLINN 162

Query: 70  VKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNN 124
           VKEMGL NE+  LEE KRL+ + P+ +LT  TKRLRQACFK  Y+K R+    N
Sbjct: 163 VKEMGLNNEIAMLEEDKRLVEDVPDTELTERTKRLRQACFKANYKKKRKCLPTN 216

[Close]
BLAST of CsaV3_3G019780 vs. TrEMBL
Match: tr|K4BI80|K4BI80_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101253567 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.8e-34
Identity = 73/117 (62.39%), Postives = 95/117 (81.20%), Query Frame = 0 

Query: 1   MRNNNGNKRRKRSFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKL 60
           ++N N N+R K+S  L LEEI++Y+H+PI++AAKE+ VGLTVLK+RCR+LNIMRWPHRKL
Sbjct: 138 IQNRNNNRRHKKSDTLELEEIQRYFHVPITKAAKELRVGLTVLKKRCRELNIMRWPHRKL 197

Query: 61  KSYNSLIQNVKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNR 118
           KS  +LI NVKEMGLT+EV+ LEE +R++   P M+LT  TK+LRQ CFK  Y+K R
Sbjct: 198 KSLQTLIHNVKEMGLTSEVEMLEEHQRMVERVPEMELTDRTKKLRQTCFKANYKKRR 254

The following BLAST results are available for this feature:
BLAST of CsaV3_3G019780 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57660.13.3e-58100.00hypothetical protein Csa_3G239240 [Cucumis sativus][more]
XP_008466842.12.3e-5189.74PREDICTED: protein RKD4 [Cucumis melo] >ADN33747.1 transcription factor [Cucumis... [more]
XP_022141143.11.3e-4171.65protein RKD4 [Momordica charantia][more]
XP_022968161.11.3e-4174.79protein RKD4 [Cucurbita maxima][more]
XP_023542025.15.3e-4072.27protein RKD2-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_3G019780 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53040.12.7e-3054.87RWP-RK domain-containing protein[more]
AT5G66990.15.0e-2445.69RWP-RK domain-containing protein[more]
AT1G74480.14.2e-2347.06RWP-RK domain-containing protein[more]
AT1G18790.13.3e-2042.86RWP-RK domain-containing protein[more]
AT4G35590.12.0e-1739.13RWP-RK domain-containing protein[more]
BLAST of CsaV3_3G019780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LVU8|RKD4_ARATH4.9e-2954.87Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1[more]
sp|Q9FGD1|RKD3_ARATH9.0e-2345.69Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1[more]
sp|Q9CA66|RKD2_ARATH7.6e-2247.06Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1[more]
sp|Q9M9U9|RKD1_ARATH6.0e-1942.86Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1[more]
sp|O81791|RKD5_ARATH3.6e-1639.13Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1[more]
BLAST of CsaV3_3G019780 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L6Q6|A0A0A0L6Q6_CUCSA2.2e-58100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239240 PE=4 SV=1[more]
tr|A0A1S3CS47|A0A1S3CS47_CUCME1.5e-5189.74protein RKD4 OS=Cucumis melo OX=3656 GN=LOC103504148 PE=4 SV=1[more]
tr|E5GBA6|E5GBA6_CUCME1.5e-5189.74Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A067JSK1|A0A067JSK1_JATCU2.2e-3467.54Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23923 PE=4 SV=1[more]
tr|K4BI80|K4BI80_SOLLC3.8e-3462.39Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101253567 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009790 embryo development
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G019780.1CsaV3_3G019780.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 16..62
e-value: 3.6E-23
score: 81.2
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 3..85
score: 18.03
NoneNo IPR availablePANTHERPTHR32002FAMILY NOT NAMEDcoord: 17..115
NoneNo IPR availablePANTHERPTHR32002:SF24PROTEIN RKD5coord: 17..115

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G019780CSPI03G19730Wild cucumber (PI 183967)cpicucB144
CsaV3_3G019780Cucsa.032230Cucumber (Gy14) v1cgycucB006
CsaV3_3G019780CmaCh18G013270Cucurbita maxima (Rimu)cmacucB0489
CsaV3_3G019780CmoCh18G013560Cucurbita moschata (Rifu)cmocucB0478
CsaV3_3G019780Cp4.1LG09g00300Cucurbita pepo (Zucchini)cpecucB0041
CsaV3_3G019780CsGy3G019650Cucumber (Gy14) v2cgybcucB117
CsaV3_3G019780Carg20330Silver-seed gourdcarcucB0576
CsaV3_3G019780Cla004263Watermelon (97103) v1cucwmB252
CsaV3_3G019780MELO3C008502Melon (DHL92) v3.5.1cucmeB247
CsaV3_3G019780ClCG05G009000Watermelon (Charleston Gray)cucwcgB238
CsaV3_3G019780MELO3C008502.2Melon (DHL92) v3.6.1cucmedB246
CsaV3_3G019780Cla97C05G091310Watermelon (97103) v2cucwmbB217
CsaV3_3G019780Bhi01G001122Wax gourdcucwgoB287
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G019780Cucumber (Chinese Long) v3cuccucB123
CsaV3_3G019780Silver-seed gourdcarcucB0574
CsaV3_3G019780Silver-seed gourdcarcucB1030
CsaV3_3G019780Cucumber (Gy14) v2cgybcucB213
CsaV3_3G019780Cucumber (Gy14) v1cgycucB326
CsaV3_3G019780Cucurbita maxima (Rimu)cmacucB0334
CsaV3_3G019780Cucurbita maxima (Rimu)cmacucB0374
CsaV3_3G019780Cucurbita maxima (Rimu)cmacucB0491
CsaV3_3G019780Cucurbita maxima (Rimu)cmacucB0723
CsaV3_3G019780Cucurbita moschata (Rifu)cmocucB0328
CsaV3_3G019780Cucurbita moschata (Rifu)cmocucB0373
CsaV3_3G019780Cucurbita moschata (Rifu)cmocucB0480
CsaV3_3G019780Cucurbita moschata (Rifu)cmocucB0710
CsaV3_3G019780Cucurbita pepo (Zucchini)cpecucB0036
CsaV3_3G019780Cucurbita pepo (Zucchini)cpecucB0204
CsaV3_3G019780Cucurbita pepo (Zucchini)cpecucB0248
CsaV3_3G019780Cucurbita pepo (Zucchini)cpecucB0899
CsaV3_3G019780Wild cucumber (PI 183967)cpicucB266
CsaV3_3G019780Bottle gourd (USVL1VR-Ls)cuclsiB165
CsaV3_3G019780Bottle gourd (USVL1VR-Ls)cuclsiB230
CsaV3_3G019780Melon (DHL92) v3.5.1cucmeB171
CsaV3_3G019780Melon (DHL92) v3.6.1cucmedB161
CsaV3_3G019780Watermelon (Charleston Gray)cucwcgB208
CsaV3_3G019780Watermelon (97103) v1cucwmB268
CsaV3_3G019780Watermelon (97103) v2cucwmbB175
CsaV3_3G019780Wax gourdcucwgoB266