CsGy3G019650 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G019650
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionprotein RKD4
LocationChr3 : 15825094 .. 15826477 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTCCAATCCTCAAACCTTTCACAATATTCCACAGTTCGACTTTGAATGGCTACACGAAGATCTTTTCCCATTCCACAAGTAAGAACAACCAAAGTAAAAAAGCTATATATATGTGTTTGTTTAGAGGATGTGTTTGTTTAGAGGGCTAGATAAAACTTTAGGTGTCGTTTCATAAGTATTTTTGCAAATTTTTATCTAAATTCTAAAAATAAAAACAAGTTTTCAAGGTTTAAGTTTTTAAGTTTTCAAAATTTTGGATGAAAAAAAATACGTATGGATTTAATATTTTTAAGAGAAAAAAAATAAAAAACCTACTAGTTATCAAACCATAGCTAAGATTTCTTACTAGGAGAGGATGCAAGATGAAAAATTTATGAAATGGGTTGTTTTATAATGGATCAATCTCATATGGGTTTTGCTAAATTTTGATTTTTTGTTTTTGTTTACAGTGAATTAGATGAGCTTCCACCTTTAGATAAAGATGAGTTTTTGGATGTGAATTCATCAGGTTCATTATTATCATTCCATTTGGTGGATAATAATGTTTTGGAGTTTGAGAGTGAATTTTTGTCAAGGGAGATGGATGAAATCGAAAGAAAAGGGCTTTCATCATCAACTTGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAAAGAGGTTGAGACTAATGAGAAATAATAATGGTAATAAGAGGAGGAAAAGAAGTTTTGTGTTGGGATTGGAAGAGATTAAGAAGTACTATCATATACCAATATCAGAAGCAGCAAAAGAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACTTAAGAGCTACAATTCTCTCATCCAAAATGTCAAGGTATGTGTATCATTTATAAGTATTTATTATTCTACACATCCAAATTTTGTGGGTTACTATCTAATTCTATTCTTTACTAATGTTTTTTAAAATCCAATTAAATTTATAATTTTTTTATAAAAAAAAAATAGGATAACCATTTAATTTTTTGTGTAAAAAAGTTGAATTCTTAAGGAACTTCCAAAAATAAAAACTTGTTTTTGAAATATATTTTTATTTAGTTTTCAAATGTTAGGTATTCATTTGAAAAAGAATCCAAAGATGTTGACTAGATGGAAATGTTGTTAATAGTTTAAATGTTGTAAGAATTGTGTTGGCAGGAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCAAAAGAGGCTATTGGTGGAATCGCCAAATATGGACCTCACACACACAACCAAAAGGCTAAGGCAAGCTTGCTTCAAAGACAAATACAGGAAAAACAGAAGACTTAGGTCTAATAATATTGCTTCTCTTCATCACTAG

mRNA sequence

ATGGACTCCAATCCTCAAACCTTTCACAATATTCCACAGTTCGACTTTGAATGGCTACACGAAGATCTTTTCCCATTCCACAATGAATTAGATGAGCTTCCACCTTTAGATAAAGATGAGTTTTTGGATGTGAATTCATCAGGTTCATTATTATCATTCCATTTGGTGGATAATAATGTTTTGGAGTTTGAGAGTGAATTTTTGTCAAGGGAGATGGATGAAATCGAAAGAAAAGGGCTTTCATCATCAACTTGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAAAGAGGTTGAGACTAATGAGAAATAATAATGGTAATAAGAGGAGGAAAAGAAGTTTTGTGTTGGGATTGGAAGAGATTAAGAAGTACTATCATATACCAATATCAGAAGCAGCAAAAGAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACTTAAGAGCTACAATTCTCTCATCCAAAATGTCAAGGAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCAAAAGAGGCTATTGGTGGAATCGCCAAATATGGACCTCACACACACAACCAAAAGGCTAAGGCAAGCTTGCTTCAAAGACAAATACAGGAAAAACAGAAGACTTAGGTCTAATAATATTGCTTCTCTTCATCACTAG

Coding sequence (CDS)

ATGGACTCCAATCCTCAAACCTTTCACAATATTCCACAGTTCGACTTTGAATGGCTACACGAAGATCTTTTCCCATTCCACAATGAATTAGATGAGCTTCCACCTTTAGATAAAGATGAGTTTTTGGATGTGAATTCATCAGGTTCATTATTATCATTCCATTTGGTGGATAATAATGTTTTGGAGTTTGAGAGTGAATTTTTGTCAAGGGAGATGGATGAAATCGAAAGAAAAGGGCTTTCATCATCAACTTGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAAAGAGGTTGAGACTAATGAGAAATAATAATGGTAATAAGAGGAGGAAAAGAAGTTTTGTGTTGGGATTGGAAGAGATTAAGAAGTACTATCATATACCAATATCAGAAGCAGCAAAAGAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACTTAAGAGCTACAATTCTCTCATCCAAAATGTCAAGGAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCAAAAGAGGCTATTGGTGGAATCGCCAAATATGGACCTCACACACACAACCAAAAGGCTAAGGCAAGCTTGCTTCAAAGACAAATACAGGAAAAACAGAAGACTTAGGTCTAATAATATTGCTTCTCTTCATCACTAG

Protein sequence

MDSNPQTFHNIPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNVLEFESEFLSREMDEIERKGLSSSTWKEEEEEEEEGEKRLRLMRNNNGNKRRKRSFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH
Homology
[Close]
BLAST of CsGy3G019650 vs. NCBI nr
Match: KGN57660.1 (hypothetical protein Csa_3G239240 [Cucumis sativus])

HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95
Identity = 229/284 (80.63%), Postives = 229/284 (80.63%), Query Frame = 0 

Query: 1   MDSNPQTFHNIPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNV 60
           MDSNPQTFHNIPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNV
Sbjct: 1   MDSNPQTFHNIPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNV 60

Query: 61  LEFESEFLSREMDEIERKGLSS-------------------------------------- 120
           LEFESEFLSREMDEIERKGL S                                      
Sbjct: 61  LEFESEFLSREMDEIERKGLPSSTWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 ----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLGLEEIKKYY 180
                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLGLEEIKKYY
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLGLEEIKKYY 180

Query: 181 HIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQ 231
           HIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQ
Sbjct: 181 HIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQ 240

[Close]
BLAST of CsGy3G019650 vs. NCBI nr
Match: XP_008466842.1 (PREDICTED: protein RKD4 [Cucumis melo] >ADN33747.1 transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82
Identity = 201/234 (85.90%), Postives = 209/234 (89.32%), Query Frame = 0 

Query: 1   MDSNPQTFHN-IPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNN 60
           MDSNPQT HN IPQFDFEWLHEDLFP HNELDELPPLD DE LDVNS  SLL FHL DN+
Sbjct: 1   MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSR-SLLPFHLDDND 60

Query: 61  VLEFESEFLSREMD--EIERKGLSS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFV 120
           VLEF+SEFLSRE++  EIER G SS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  FV
Sbjct: 61  VLEFDSEFLSRELEMVEIERNGFSSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFV 120

Query: 121 LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGL 180
           LGLEEI+KY+HIPIS+AAKEMNVGLTVLKRRCRQLNIMRWPHRK KS NSLIQNVKEMGL
Sbjct: 121 LGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGL 180

Query: 181 TNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH 231
           TNEVKGLEE KRLL E PNMDLTHT KRLRQACFK  Y+KNRRLRSNNIASLHH
Sbjct: 181 TNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH 233

[Close]
BLAST of CsGy3G019650 vs. NCBI nr
Match: XP_022968161.1 (protein RKD4 [Cucurbita maxima])

HSP 1 Score: 189.1 bits (479), Expect = 1.7e-44
Identity = 124/263 (47.15%), Postives = 146/263 (55.51%), Query Frame = 0 

Query: 5   PQTFHNIPQFDFEW-LHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNVLEF 64
           P T  +   FDF W  H+ LFPF +E  ELPPLD D   D NS    L FH  D + LE 
Sbjct: 3   PSTKLHPHDFDFGWPYHQHLFPFDHEALELPPLDVDGSFDFNSLS--LPFHWDDISELES 62

Query: 65  E----------------------------------SEFLSREMDEIER---KGLSSXXXX 124
           E                                   + +SRE+ E+ R    GLS+    
Sbjct: 63  EILSLDKHMIPVTPLYEEDMVAVDETKPERMVKLKDDDMSRELQEVTRMIETGLSNWKEE 122

Query: 125 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKR 184
                                        VLGLEEI+K++HIPI+EAAK M+VGLTVLKR
Sbjct: 123 EEECEKRVRLIMRNGRRKSS---------VLGLEEIQKHFHIPITEAAKAMSVGLTVLKR 182

Query: 185 RCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLR 230
           RCR+LNIMRWPHRKLKS NSLI NV+EMGLTNE+KGLEE KRL+ E PNMDLTH T+RLR
Sbjct: 183 RCRELNIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPNMDLTHRTRRLR 242

[Close]
BLAST of CsGy3G019650 vs. NCBI nr
Match: XP_022945007.1 (protein RKD2 [Cucurbita moschata])

HSP 1 Score: 179.1 bits (453), Expect = 1.7e-41
Identity = 120/254 (47.24%), Postives = 141/254 (55.51%), Query Frame = 0 

Query: 14  FDFEW-LHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNVLEFESEFL---- 73
           FDFEW  H+ LFPF +E  ELPPLD D   D NS    L FH  D + LE E  +L    
Sbjct: 12  FDFEWPYHQHLFPFDHEALELPPLDVDASFDFNSLS--LPFHWDDISELEAEILWLDKHM 71

Query: 74  -------------------------------SREMDEIER---KGLSSXXXXXXXXXXXX 133
                                          SRE+ E  R    GLSS            
Sbjct: 72  IPVTPLNDEDMLAVDETKAERMVKLKDNDGTSRELQEETRVIETGLSSCKENEEEEECER 131

Query: 134 XXXXXXXXXXXXXXXXXXXXFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIM 193
                                VLGL+EI+K++ IPI+EAAK MNVGLTVLKRRCR+L+IM
Sbjct: 132 RMRLIMRNGRRKSK-------VLGLDEIQKHFDIPITEAAKAMNVGLTVLKRRCRELHIM 191

Query: 194 RWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKY 229
           RWPHRKLKS NSLI NV+EMGLTNE+KGLEE KRL+ E P+ DLTH T+RLRQACFK  Y
Sbjct: 192 RWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDTDLTHRTRRLRQACFKANY 251

[Close]
BLAST of CsGy3G019650 vs. NCBI nr
Match: XP_022141143.1 (protein RKD4 [Momordica charantia])

HSP 1 Score: 177.2 bits (448), Expect = 6.5e-41
Identity = 120/246 (48.78%), Postives = 143/246 (58.13%), Query Frame = 0 

Query: 9   HNIPQFDFEW-LHEDLFPFHNELDELPPLDKDEFLDVNSSGSL-LSFHLVDNNVLEFE-- 68
           HN P  DFEW  HEDLF F   L ELPPLD   F D + + SL L FH  + + LE E  
Sbjct: 10  HNNP-LDFEWPYHEDLFQFDKAL-ELPPLDVGLF-DFDLADSLSLPFHWENLSQLELELQ 69

Query: 69  --SEF-------------------LSREMDEIERKGLSSXXXXXXXXXXXXXXXXXXXXX 128
              EF                   L  E  + E++                         
Sbjct: 70  SPPEFFSPDKHMTADEKPPARMIKLEYEEGQHEQQQQREQIERGFNSDSSWISDVDEKKR 129

Query: 129 XXXXXXXXXXXFVLGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKS 188
                       VLGLEEI+ ++HIPISEAAK+MNVGLTVLK+RCR+LNIMRWPHRKLKS
Sbjct: 130 RNNMRLRRSKSSVLGLEEIQNHFHIPISEAAKQMNVGLTVLKKRCRELNIMRWPHRKLKS 189

Query: 189 YNSLIQNVKEMGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSN 230
            NSLI+NVKEMGL++E+K LEE KRL+ E P+MDLTH TKRLRQACFK  Y+K RR  +N
Sbjct: 190 LNSLIKNVKEMGLSSEIKVLEEHKRLVEELPDMDLTHRTKRLRQACFKANYKK-RRSNNN 249

[Close]
BLAST of CsGy3G019650 vs. TAIR10
Match: AT5G53040.1 (RWP-RK domain-containing protein)

HSP 1 Score: 124.4 bits (311), Expect = 9.1e-29
Identity = 59/104 (56.73%), Postives = 81/104 (77.88%), Query Frame = 0 

Query: 117 LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGL 176
           L + EIK+++  PI +AAKE+NVGLTVLK+RCR+L I RWPHRKLKS NSLI+N+K +G+
Sbjct: 148 LEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGM 207

Query: 177 TNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRL 221
             EVK LEE + L+ + P+ +L+  TK+LRQACFK  Y++ + L
Sbjct: 208 EEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRKSL 251

[Close]
BLAST of CsGy3G019650 vs. TAIR10
Match: AT5G66990.1 (RWP-RK domain-containing protein)

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23
Identity = 53/116 (45.69%), Postives = 83/116 (71.55%), Query Frame = 0 

Query: 120 EEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM----- 179
           E +K+Y+++PI++AAKE+N+G+T+LK+RCR+L I RWPHRKL S N+LI N+K++     
Sbjct: 162 EMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTK 221

Query: 180 ------GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNN 225
                  L N ++ LE +K+++ E P+++    TKRLRQACFK KY++ R   S++
Sbjct: 222 GRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

[Close]
BLAST of CsGy3G019650 vs. TAIR10
Match: AT1G74480.1 (RWP-RK domain-containing protein)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-22
Identity = 56/119 (47.06%), Postives = 81/119 (68.07%), Query Frame = 0 

Query: 117 LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM-- 176
           L  E + +Y+++PI++AA  +NVGLT+LKRRCR+L I RWPHRKL S N+LI NVKE+  
Sbjct: 135 LSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQK 194

Query: 177 --------GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFK--DKYRKNRRLRSN 224
                    L + ++ LE++KR + + P+++    TKRLRQACFK   K +K R L+S+
Sbjct: 195 MEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSLKSD 253

[Close]
BLAST of CsGy3G019650 vs. TAIR10
Match: AT1G18790.1 (RWP-RK domain-containing protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-19
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 0 

Query: 117 LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGL 176
           L  E I  Y+++PI++AA+E+N+GLT+LK+RCR+L I RWPHRKL S   LI NVKE+  
Sbjct: 128 LSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKEL-- 187

Query: 177 TNEVKGLEEQKRL-------------LVESPNMDLTHTTKRLRQACFKDKYRKNRR 220
             +++G E + +L                 P++     TKRLRQACFK  +++ RR
Sbjct: 188 -EKMEGEENEDKLRNXXXXXXXXXXXXXXXPDLKFEDKTKRLRQACFKANHKRKRR 240

[Close]
BLAST of CsGy3G019650 vs. TAIR10
Match: AT4G35590.1 (RWP-RK domain-containing protein)

HSP 1 Score: 85.5 bits (210), Expect = 4.7e-17
Identity = 45/115 (39.13%), Postives = 71/115 (61.74%), Query Frame = 0 

Query: 117 LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKE--- 176
           L LEE+ KY+ + I EA++ + VGLTVLK++CR+  I RWPHRK+KS + LI +++    
Sbjct: 242 LSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAE 301

Query: 177 ----------MGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNR 219
                     M +  + + LE +KR +V+ P M++   TK+ RQ  FK ++R +R
Sbjct: 302 KQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASR 356

[Close]
BLAST of CsGy3G019650 vs. Swiss-Prot
Match: sp|Q9LVU8|RKD4_ARATH (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27
Identity = 59/104 (56.73%), Postives = 81/104 (77.88%), Query Frame = 0 

Query: 117 LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGL 176
           L + EIK+++  PI +AAKE+NVGLTVLK+RCR+L I RWPHRKLKS NSLI+N+K +G+
Sbjct: 148 LEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGM 207

Query: 177 TNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRL 221
             EVK LEE + L+ + P+ +L+  TK+LRQACFK  Y++ + L
Sbjct: 208 EEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRKSL 251

[Close]
BLAST of CsGy3G019650 vs. Swiss-Prot
Match: sp|Q9FGD1|RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-22
Identity = 53/116 (45.69%), Postives = 83/116 (71.55%), Query Frame = 0 

Query: 120 EEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM----- 179
           E +K+Y+++PI++AAKE+N+G+T+LK+RCR+L I RWPHRKL S N+LI N+K++     
Sbjct: 162 EMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLGNTK 221

Query: 180 ------GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNN 225
                  L N ++ LE +K+++ E P+++    TKRLRQACFK KY++ R   S++
Sbjct: 222 GRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

[Close]
BLAST of CsGy3G019650 vs. Swiss-Prot
Match: sp|Q9CA66|RKD2_ARATH (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.3e-21
Identity = 56/119 (47.06%), Postives = 81/119 (68.07%), Query Frame = 0 

Query: 117 LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEM-- 176
           L  E + +Y+++PI++AA  +NVGLT+LKRRCR+L I RWPHRKL S N+LI NVKE+  
Sbjct: 135 LSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQK 194

Query: 177 --------GLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFK--DKYRKNRRLRSN 224
                    L + ++ LE++KR + + P+++    TKRLRQACFK   K +K R L+S+
Sbjct: 195 MEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSLKSD 253

[Close]
BLAST of CsGy3G019650 vs. Swiss-Prot
Match: sp|Q9M9U9|RKD1_ARATH (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.4e-18
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 0 

Query: 117 LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGL 176
           L  E I  Y+++PI++AA+E+N+GLT+LK+RCR+L I RWPHRKL S   LI NVKE+  
Sbjct: 128 LSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKEL-- 187

Query: 177 TNEVKGLEEQKRL-------------LVESPNMDLTHTTKRLRQACFKDKYRKNRR 220
             +++G E + +L                 P++     TKRLRQACFK  +++ RR
Sbjct: 188 -EKMEGEENEDKLRNXXXXXXXXXXXXXXXPDLKFEDKTKRLRQACFKANHKRKRR 240

[Close]
BLAST of CsGy3G019650 vs. Swiss-Prot
Match: sp|O81791|RKD5_ARATH (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.4e-16
Identity = 45/115 (39.13%), Postives = 71/115 (61.74%), Query Frame = 0 

Query: 117 LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKE--- 176
           L LEE+ KY+ + I EA++ + VGLTVLK++CR+  I RWPHRK+KS + LI +++    
Sbjct: 242 LSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAE 301

Query: 177 ----------MGLTNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNR 219
                     M +  + + LE +KR +V+ P M++   TK+ RQ  FK ++R +R
Sbjct: 302 KQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASR 356

[Close]
BLAST of CsGy3G019650 vs. TrEMBL
Match: tr|A0A0A0L6Q6|A0A0A0L6Q6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239240 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 8.0e-96
Identity = 229/284 (80.63%), Postives = 229/284 (80.63%), Query Frame = 0 

Query: 1   MDSNPQTFHNIPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNV 60
           MDSNPQTFHNIPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNV
Sbjct: 1   MDSNPQTFHNIPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNNV 60

Query: 61  LEFESEFLSREMDEIERKGLSS-------------------------------------- 120
           LEFESEFLSREMDEIERKGL S                                      
Sbjct: 61  LEFESEFLSREMDEIERKGLPSSTWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 ----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLGLEEIKKYY 180
                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLGLEEIKKYY
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLGLEEIKKYY 180

Query: 181 HIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQ 231
           HIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQ
Sbjct: 181 HIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGLTNEVKGLEEQ 240

[Close]
BLAST of CsGy3G019650 vs. TrEMBL
Match: tr|A0A1S3CS47|A0A1S3CS47_CUCME (protein RKD4 OS=Cucumis melo OX=3656 GN=LOC103504148 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.0e-82
Identity = 201/234 (85.90%), Postives = 209/234 (89.32%), Query Frame = 0 

Query: 1   MDSNPQTFHN-IPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNN 60
           MDSNPQT HN IPQFDFEWLHEDLFP HNELDELPPLD DE LDVNS  SLL FHL DN+
Sbjct: 1   MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSR-SLLPFHLDDND 60

Query: 61  VLEFESEFLSREMD--EIERKGLSS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFV 120
           VLEF+SEFLSRE++  EIER G SS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  FV
Sbjct: 61  VLEFDSEFLSRELEMVEIERNGFSSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFV 120

Query: 121 LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGL 180
           LGLEEI+KY+HIPIS+AAKEMNVGLTVLKRRCRQLNIMRWPHRK KS NSLIQNVKEMGL
Sbjct: 121 LGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGL 180

Query: 181 TNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH 231
           TNEVKGLEE KRLL E PNMDLTHT KRLRQACFK  Y+KNRRLRSNNIASLHH
Sbjct: 181 TNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH 233

[Close]
BLAST of CsGy3G019650 vs. TrEMBL
Match: tr|E5GBA6|E5GBA6_CUCME (Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.0e-82
Identity = 201/234 (85.90%), Postives = 209/234 (89.32%), Query Frame = 0 

Query: 1   MDSNPQTFHN-IPQFDFEWLHEDLFPFHNELDELPPLDKDEFLDVNSSGSLLSFHLVDNN 60
           MDSNPQT HN IPQFDFEWLHEDLFP HNELDELPPLD DE LDVNS  SLL FHL DN+
Sbjct: 1   MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSR-SLLPFHLDDND 60

Query: 61  VLEFESEFLSREMD--EIERKGLSS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFV 120
           VLEF+SEFLSRE++  EIER G SS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  FV
Sbjct: 61  VLEFDSEFLSRELEMVEIERNGFSSTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFV 120

Query: 121 LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGL 180
           LGLEEI+KY+HIPIS+AAKEMNVGLTVLKRRCRQLNIMRWPHRK KS NSLIQNVKEMGL
Sbjct: 121 LGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGL 180

Query: 181 TNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNNIASLHH 231
           TNEVKGLEE KRLL E PNMDLTHT KRLRQACFK  Y+KNRRLRSNNIASLHH
Sbjct: 181 TNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH 233

[Close]
BLAST of CsGy3G019650 vs. TrEMBL
Match: tr|A0A067JSK1|A0A067JSK1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23923 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 7.4e-33
Identity = 74/108 (68.52%), Postives = 88/108 (81.48%), Query Frame = 0 

Query: 117 LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGL 176
           L +EEIKKY+ +PI++AAKEMNVGLTVLK+RCR+LNIMRWPHRKLKS NSLI NVKEMGL
Sbjct: 109 LEMEEIKKYFDLPITKAAKEMNVGLTVLKKRCRELNIMRWPHRKLKSLNSLINNVKEMGL 168

Query: 177 TNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRLRSNN 225
            NE+  LEE KRL+ + P+ +LT  TKRLRQACFK  Y+K R+    N
Sbjct: 169 NNEIAMLEEDKRLVEDVPDTELTERTKRLRQACFKANYKKKRKCLPTN 216

[Close]
BLAST of CsGy3G019650 vs. TrEMBL
Match: tr|A0A061G154|A0A061G154_THECC (RWP-RK domain-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_015430 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 8.1e-32
Identity = 71/104 (68.27%), Postives = 87/104 (83.65%), Query Frame = 0 

Query: 117 LGLEEIKKYYHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHRKLKSYNSLIQNVKEMGL 176
           L L+EI+KY+  PIS+AAKEMNVGLTVLK+RCR+LNIMRWPHRK+KS  +LI NVKE+GL
Sbjct: 148 LELDEIQKYFDFPISKAAKEMNVGLTVLKKRCRELNIMRWPHRKIKSLTALINNVKELGL 207

Query: 177 TNEVKGLEEQKRLLVESPNMDLTHTTKRLRQACFKDKYRKNRRL 221
           TNE+  LE+ KRLL + P+M+LT  TK+LRQACFK  Y+K R L
Sbjct: 208 TNEIMMLEDHKRLLEKLPDMELTERTKKLRQACFKANYKKRRSL 251

The following BLAST results are available for this feature:
BLAST of CsGy3G019650 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57660.11.2e-9580.63hypothetical protein Csa_3G239240 [Cucumis sativus][more]
XP_008466842.11.5e-8285.90PREDICTED: protein RKD4 [Cucumis melo] >ADN33747.1 transcription factor [Cucumis... [more]
XP_022968161.11.7e-4447.15protein RKD4 [Cucurbita maxima][more]
XP_022945007.11.7e-4147.24protein RKD2 [Cucurbita moschata][more]
XP_022141143.16.5e-4148.78protein RKD4 [Momordica charantia][more]
BLAST of CsGy3G019650 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53040.19.1e-2956.73RWP-RK domain-containing protein[more]
AT5G66990.11.1e-2345.69RWP-RK domain-containing protein[more]
AT1G74480.11.3e-2247.06RWP-RK domain-containing protein[more]
AT1G18790.11.3e-1943.10RWP-RK domain-containing protein[more]
AT4G35590.14.7e-1739.13RWP-RK domain-containing protein[more]
BLAST of CsGy3G019650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LVU8|RKD4_ARATH1.6e-2756.73Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1[more]
sp|Q9FGD1|RKD3_ARATH2.1e-2245.69Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1[more]
sp|Q9CA66|RKD2_ARATH2.3e-2147.06Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1[more]
sp|Q9M9U9|RKD1_ARATH2.4e-1843.10Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1[more]
sp|O81791|RKD5_ARATH8.4e-1639.13Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1[more]
BLAST of CsGy3G019650 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L6Q6|A0A0A0L6Q6_CUCSA8.0e-9680.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239240 PE=4 SV=1[more]
tr|A0A1S3CS47|A0A1S3CS47_CUCME1.0e-8285.90protein RKD4 OS=Cucumis melo OX=3656 GN=LOC103504148 PE=4 SV=1[more]
tr|E5GBA6|E5GBA6_CUCME1.0e-8285.90Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A067JSK1|A0A067JSK1_JATCU7.4e-3368.52Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23923 PE=4 SV=1[more]
tr|A0A061G154|A0A061G154_THECC8.1e-3268.27RWP-RK domain-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_015... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G019650.1CsGy3G019650.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..100
NoneNo IPR availablePANTHERPTHR32002FAMILY NOT NAMEDcoord: 118..216
NoneNo IPR availablePANTHERPTHR32002:SF24PROTEIN RKD5coord: 118..216
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 117..163
e-value: 1.1E-22
score: 79.7
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 104..186
score: 18.03

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G019650Cla004263Watermelon (97103) v1cgybwmB229
CsGy3G019650Csa3G239240Cucumber (Chinese Long) v2cgybcuB109
CsGy3G019650MELO3C008502Melon (DHL92) v3.5.1cgybmeB210
CsGy3G019650ClCG05G009000Watermelon (Charleston Gray)cgybwcgB214
CsGy3G019650CSPI03G19730Wild cucumber (PI 183967)cgybcpiB110
CsGy3G019650CmaCh18G013270Cucurbita maxima (Rimu)cgybcmaB357
CsGy3G019650CmoCh18G013560Cucurbita moschata (Rifu)cgybcmoB328
CsGy3G019650Cp4.1LG09g00300Cucurbita pepo (Zucchini)cgybcpeB289
CsGy3G019650MELO3C008502.2Melon (DHL92) v3.6.1cgybmedB215
CsGy3G019650CsaV3_3G019780Cucumber (Chinese Long) v3cgybcucB117
CsGy3G019650Cla97C05G091310Watermelon (97103) v2cgybwmbB206
CsGy3G019650Bhi01G001122Wax gourdcgybwgoB271
CsGy3G019650Carg20330Silver-seed gourdcarcgybB0545
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G019650Cucumber (Gy14) v2cgybcgybB088
CsGy3G019650Cucurbita maxima (Rimu)cgybcmaB333
CsGy3G019650Cucurbita maxima (Rimu)cgybcmaB354
CsGy3G019650Cucurbita moschata (Rifu)cgybcmoB304
CsGy3G019650Cucurbita moschata (Rifu)cgybcmoB326
CsGy3G019650Cucurbita pepo (Zucchini)cgybcpeB285
CsGy3G019650Cucurbita pepo (Zucchini)cgybcpeB318
CsGy3G019650Cucurbita pepo (Zucchini)cgybcpeB430
CsGy3G019650Bottle gourd (USVL1VR-Ls)cgyblsiB139
CsGy3G019650Bottle gourd (USVL1VR-Ls)cgyblsiB198
CsGy3G019650Melon (DHL92) v3.6.1cgybmedB142
CsGy3G019650Silver-seed gourdcarcgybB0543
CsGy3G019650Silver-seed gourdcarcgybB0974
CsGy3G019650Cucumber (Chinese Long) v3cgybcucB133
CsGy3G019650Watermelon (97103) v2cgybwmbB169
CsGy3G019650Wax gourdcgybwgoB251